View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14582_low_4 (Length: 294)
Name: NF14582_low_4
Description: NF14582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14582_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 246877 - 247137
Alignment:
| Q |
20 |
acattctacaccataaaagagagatggagatataacaatgtcataccaagaaagatataacaaaaaatacgaagtgttaaatgagttattggaaatgaat |
119 |
Q |
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| T |
246877 |
acattctacaccataa--gagagatggagatataacaatgtcataccaagaaagatataacaaaaaatacgaagtgttgaatgagttattggaaatgaat |
246974 |
T |
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| Q |
120 |
gtttttaaaagtaccaacattaatggattgatctaattgataaagatataggcttttttaacccaatcaaaagttcgttctcgaataactaaattaaaaa |
219 |
Q |
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| T |
246975 |
gtttttaaaagtaccaacactaatggattgatctaattgataaagatataggcttttttaacccaatcaaaagttcgttctcgaataactaaattaaaaa |
247074 |
T |
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| Q |
220 |
ataaagttaagcaatttgtatcatctctgtattcgtgaccttagttcaattgataagaataat |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
247075 |
ataaagttaagcaatttgtatcatctctgtattcgtgaccttagttcaattgatgagaataat |
247137 |
T |
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