View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14583_low_1 (Length: 411)
Name: NF14583_low_1
Description: NF14583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14583_low_1 |
 | |
|
| [»] scaffold1335 (1 HSPs) |
| | |
|
| [»] scaffold0891 (1 HSPs) |
| | |
|
| [»] scaffold1268 (1 HSPs) |
| | |
|
| [»] scaffold1267 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-131; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 16 - 317
Target Start/End: Original strand, 35776154 - 35776455
Alignment:
| Q |
16 |
cacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
115 |
Q |
| |
|
|||||||||||| || |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
|
|
| T |
35776154 |
cacacaacggtacaacatcttgtgttgcatttttatcagattctggtaaaccatcgggtatagtctcaaattgaaaatctggtagacccttcacaaagtc |
35776253 |
T |
|
| Q |
116 |
agctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaa |
215 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| | |||||||||| |
|
|
| T |
35776254 |
ttgtccaagcgattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacctttgcaacgaaagagtttggcaagttgcatgaaa |
35776353 |
T |
|
| Q |
216 |
gggttcacatgaccttgtactggaaatggtacaaatacagcatgaggcttttgttggatatgcgtagagggagaataagaatccatttttgttcaaatat |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35776354 |
gggttcacatgaccttgtactggaaatggtacaaatacagcatgaggcttttgttgaatatgcgtagagggagaataagaatccatttttgttcaaatat |
35776453 |
T |
|
| Q |
316 |
ca |
317 |
Q |
| |
|
|| |
|
|
| T |
35776454 |
ca |
35776455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 35869078 - 35869330
Alignment:
| Q |
16 |
cacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
115 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35869078 |
cacacaacgttggaatatcttgtgttgcatctttatctgactctggcaaaccatcaggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
35869177 |
T |
|
| Q |
116 |
agctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaa |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35869178 |
agctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaa |
35869277 |
T |
|
| Q |
216 |
gggttcacatgaccttgtactggaaatggtacaaatacagcatgaggcttttg |
268 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | |||||| ||||||||||||| |
|
|
| T |
35869278 |
gggttcacatgaccttgtgctggaaatggtgctaatacaacatgaggcttttg |
35869330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 35854469 - 35854721
Alignment:
| Q |
16 |
cacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
115 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
35854469 |
cacacaacgttggaatatcttgtgttgcatctttatctgactctggcaaaccatcaggtatggtctcaaattgaaaatctggtagaccattcacaaagtc |
35854568 |
T |
|
| Q |
116 |
agctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaa |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35854569 |
ttgtccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaa |
35854668 |
T |
|
| Q |
216 |
gggttcacatgaccttgtactggaaatggtacaaatacagcatgaggcttttg |
268 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
35854669 |
gggttcacatgaccttgtgctggaaatggtactaatacaacatgaggcttttg |
35854721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 35842064 - 35842213
Alignment:
| Q |
119 |
tccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaaggg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35842064 |
tccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaaggg |
35842163 |
T |
|
| Q |
219 |
ttcacatgaccttgtactggaaatggtacaaatacagcatgaggcttttg |
268 |
Q |
| |
|
||||||||||||||| ||||||||||| | |||||| |||| |||||||| |
|
|
| T |
35842164 |
ttcacatgaccttgtgctggaaatggtgctaatacaacatgtggcttttg |
35842213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 35759729 - 35759981
Alignment:
| Q |
16 |
cacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
115 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||| | || |||||||| |||||||||||||||||||||||||||||||| |||| | | || |
|
|
| T |
35759729 |
cacacaacgttggaatatcttgtgttgcatctttataaaaaaaaggcaaaccatcaggtatggtctcaaattgaaaatctggtagaccattcatataatc |
35759828 |
T |
|
| Q |
116 |
agctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaaccgttgcaacgtaggagtttggctaattgcatgaaa |
215 |
Q |
| |
|
|||||| || |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| |||||| || |
|
|
| T |
35759829 |
ttgtccaagtgagtttaccaaacgtttgtggttgaattcagtgttcacaaaggttatgtggaaaccgttgcaacgcaggagtttagctagttgcattaag |
35759928 |
T |
|
| Q |
216 |
gggttcacatgaccttgtactggaaatggtacaaatacagcatgaggcttttg |
268 |
Q |
| |
|
|| || |||||||| ||| |||| |||| || ||||||||||| ||||||| |
|
|
| T |
35759929 |
ggattaacatgaccctgtgctgggtatggcactaatacagcatgtagcttttg |
35759981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 269
Target Start/End: Original strand, 35737923 - 35738157
Alignment:
| Q |
35 |
ttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatc |
134 |
Q |
| |
|
||||||||||| | ||| ||| ||| |||||||| ||||| |||||||| |||||||||| ||||||| | ||| ||| |||||||||||||||| |
|
|
| T |
35737923 |
ttgtgttgcattctcatcagatggtggcaaaccatctggtatagtctcaaacctaaaatctggttgaccctttaaaaagtcatgtccaagagattttatc |
35738022 |
T |
|
| Q |
135 |
aaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc---gttgcaacgtaggagtttggctaattgcatgaaagggttcacatgacctt |
231 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| ||||| ||| | |||| ||| |||||||||||||||||||| || ||||||| |
|
|
| T |
35738023 |
aaacgtttgtggttgaattcattgttcacaaaggttatgtggaaaccaagtttgtta---aggattttagctaattgcatgaaagggtttacgtgacctt |
35738119 |
T |
|
| Q |
232 |
gtactggaaatggtacaaatacagcatgaggcttttgt |
269 |
Q |
| |
|
|| |||||||||||||| | || |||||||||||||| |
|
|
| T |
35738120 |
gtgctggaaatggtacacaaactacatgaggcttttgt |
35738157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1335 (Bit Score: 148; Significance: 6e-78; HSPs: 1)
Name: scaffold1335
Description:
Target: scaffold1335; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 78 - 277
Target Start/End: Complemental strand, 2027 - 1828
Alignment:
| Q |
78 |
gtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaa |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
2027 |
gtctcaaattgaaaatctggtagacccttcacaaactcagctccaagagattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatatgga |
1928 |
T |
|
| Q |
178 |
aaccgttgcaacgtaggagtttggctaattgcatgaaagggttcacatgaccttgtactggaaatggtacaaatacagcatgaggcttttgttggatatg |
277 |
Q |
| |
|
|||| |||||||| | ||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| |||| |
|
|
| T |
1927 |
aacctttgcaacggaagagtttggctagttgcatcattgggttcacatgaccttgtgctggaaatggtacaaatacagcatgtggtttttgttgggtatg |
1828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0891 (Bit Score: 138; Significance: 5e-72; HSPs: 1)
Name: scaffold0891
Description:
Target: scaffold0891; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 142 - 1
Alignment:
| Q |
16 |
cacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
142 |
cacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcaggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
43 |
T |
|
| Q |
116 |
agctccaagagattttatcaaacgtttgtggttgaattcagt |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42 |
agctccaagagattttatcaaacgtttgtggttgaattcagt |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1268 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold1268
Description:
Target: scaffold1268; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 112 - 1
Alignment:
| Q |
16 |
cacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
115 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
112 |
cacacaacgttggaatatcttgtgttgcatctttatctgactctggcaaaccatcaggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
13 |
T |
|
| Q |
116 |
agctccaagaga |
127 |
Q |
| |
|
|||||||||||| |
|
|
| T |
12 |
agctccaagaga |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1267 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold1267
Description:
Target: scaffold1267; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 112 - 1
Alignment:
| Q |
16 |
cacacaacggtataatatcttgtgttgcatctttatctgattctggtaaaccatcgggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
115 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
112 |
cacacaacgttggaatatcttgtgttgcatctttatctgactctggcaaaccatcaggtatggtctcaaattgaaaatctggtagacccttcacaaactc |
13 |
T |
|
| Q |
116 |
agctccaagaga |
127 |
Q |
| |
|
|||||||||||| |
|
|
| T |
12 |
agctccaagaga |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 4482283 - 4482335
Alignment:
| Q |
126 |
gattttatcaaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
||||||| |||||||||||| ||| |||| ||||| ||||||||||||||||| |
|
|
| T |
4482283 |
gattttagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaa |
4482335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 4575881 - 4575925
Alignment:
| Q |
134 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4575881 |
caaacgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
4575925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 4627576 - 4627620
Alignment:
| Q |
134 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4627576 |
caaacgtttgtgattgtattcagtgttgacaaaggttatgtgaaa |
4627620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 4258878 - 4258831
Alignment:
| Q |
134 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
181 |
Q |
| |
|
|||||||||||| || |||||||||| |||||||||||||||||||| |
|
|
| T |
4258878 |
caaacgtttgtgattatattcagtgttgacaaaggttatgtgaaaacc |
4258831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 3173433 - 3173473
Alignment:
| Q |
138 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
3173433 |
cgtttgtgattgtattcagtgtttacaaaggttatgtgaaa |
3173473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 4265755 - 4265715
Alignment:
| Q |
138 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4265755 |
cgtttgtgattgtattcagtgttgacaaaggttatgtgaaa |
4265715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 4462640 - 4462680
Alignment:
| Q |
141 |
ttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
181 |
Q |
| |
|
||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
4462640 |
ttgtgattgtattcagtgttgacaaaggttatgtgaaaacc |
4462680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 4488895 - 4488855
Alignment:
| Q |
138 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4488895 |
cgtttgtgattgtattcagtgttgacaaaggttatgtgaaa |
4488855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 4513681 - 4513637
Alignment:
| Q |
134 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||||||| ||| |||| ||||| ||||||||||||||||| |
|
|
| T |
4513681 |
caaacgtttgtgattgtattcggtgttaacaaaggttatgtgaaa |
4513637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 4517766 - 4517810
Alignment:
| Q |
134 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||||||| ||| |||| ||||| ||||||||||||||||| |
|
|
| T |
4517766 |
caaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaa |
4517810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 4558555 - 4558595
Alignment:
| Q |
138 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
4558555 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaa |
4558595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 4587062 - 4587102
Alignment:
| Q |
138 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4587062 |
cgtttgtgattgtattcagtgtttacaaaggttatgtgaaa |
4587102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 4594436 - 4594480
Alignment:
| Q |
134 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
||||||||| || ||| |||||||||| ||||||||||||||||| |
|
|
| T |
4594436 |
caaacgtttatgattgtattcagtgttgacaaaggttatgtgaaa |
4594480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 4603536 - 4603580
Alignment:
| Q |
134 |
caaacgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
178 |
Q |
| |
|
|||||||||||| ||| |||| ||||| ||||||||||||||||| |
|
|
| T |
4603536 |
caaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaa |
4603580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 1349615 - 1349579
Alignment:
| Q |
138 |
cgtttgtggttgaattcagtgttcacaaaggttatgt |
174 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
1349615 |
cgtttgtggttgaattcagtgttgacaaatgttatgt |
1349579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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