View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14584_low_18 (Length: 236)
Name: NF14584_low_18
Description: NF14584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14584_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 9075824 - 9076039
Alignment:
| Q |
1 |
atgtggaattaccaaatactccttccattgtgtcaaggaattggtatctacaaaatcatcaagagtnnnnnnntcagttgcagaatctcttatgaaaatg |
100 |
Q |
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| T |
9075824 |
atgtggaattaccaaatactccttccattgtgtcaaggaattggtatctacaaaatcatcaagagtaaaaaaatcagttgcagaatctcttatgaaaatg |
9075923 |
T |
|
| Q |
101 |
atatatagtacatgaaaagatgtgagattccaaaa------------acattgcataagaagacaaacgtggaaagtatatnnnnnnncaagtatatcct |
188 |
Q |
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| T |
9075924 |
atatatagtacatgaaaagatgtgagatcccaaaaacattgcataagacattgcataagaagacaaatgtggaaagtatataaaaaaacaagtatatcct |
9076023 |
T |
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| Q |
189 |
aatcataatcataatg |
204 |
Q |
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|||||||||||||||| |
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| T |
9076024 |
aatcataatcataatg |
9076039 |
T |
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