View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14584_low_3 (Length: 543)
Name: NF14584_low_3
Description: NF14584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14584_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 479; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 19 - 538
Target Start/End: Original strand, 44829515 - 44830033
Alignment:
| Q |
19 |
tttcctgagaaaagataattaagattgactacatggcttgctcatagaaatatgcagggaaaaacaaattaaaataagaaatgaaagttctgctacnnnn |
118 |
Q |
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| T |
44829515 |
tttcctgagaaaagataattaagattgactacatggcttgctcatagaaatatgcagggaaaaacaaattaaaataagaaatgaaagttctgctacaaaa |
44829614 |
T |
|
| Q |
119 |
nnnntcaagttgtgccaccaaaacaacaattacgtgaaagagaatgcttcatgtaaggagacagaagagccattctgttctcaactttgacattatccaa |
218 |
Q |
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| T |
44829615 |
aaa-tcaagttgtgccaccaaaacaacaattacgtgaaagagaatgcttcatgtaaggagacagaagagccattctgttctcaactttgacattatccaa |
44829713 |
T |
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| Q |
219 |
gtccataaaaaattaagacgaactgtactaataatagttcctaaaaaacaacttaataaactcaacatagagattaaaatgttcacatttccccctcaat |
318 |
Q |
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| T |
44829714 |
gtccataaaaaattaagaggaactgtactaataatagttcctaaaaaacaacttaataaactcaacatagagattaaaatgttcacatttccccctcaat |
44829813 |
T |
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| Q |
319 |
ttatagtggaaagtaagaagaataatcatgtagaaaacataattacacataactatatacaaaatttcaaagaattaacaatcaaattgaactcacttta |
418 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
44829814 |
ttatagtggaaagtaagaagaataatcatgtagaaaacataattacacataactatatacaaaatttcaaagaattaacaaccaaattgaactcacttta |
44829913 |
T |
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| Q |
419 |
atcgactcagctcgttcattttggatttgctttttcaccaaatgtatcttgttcgtcaaggtttgacgagtgattgtcgctccccctccatgtttttcct |
518 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
44829914 |
atcgactcagctcgttcattttggatttgctttttcaccaaatgtatcttgttcgtcaaggtttgacgagtgattgtcgctccccctccatgttttgcct |
44830013 |
T |
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| Q |
519 |
atccatacaataagtattat |
538 |
Q |
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|||||||||||||||||||| |
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| T |
44830014 |
atccatacaataagtattat |
44830033 |
T |
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