View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14584_low_4 (Length: 509)
Name: NF14584_low_4
Description: NF14584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14584_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 444; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 20 - 504
Target Start/End: Original strand, 44829550 - 44830033
Alignment:
| Q |
20 |
gcttgctcatagaaatatgcagggaaaaacaaattaaaataagaaatgaaagttctgctacnnnnnnnntcaagttgtgccaccaaaacaacaattacgt |
119 |
Q |
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| T |
44829550 |
gcttgctcatagaaatatgcagggaaaaacaaattaaaataagaaatgaaagttctgctacaaaaaaa-tcaagttgtgccaccaaaacaacaattacgt |
44829648 |
T |
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| Q |
120 |
gaaagagaatgcttcatgtaaggagacagaagagccattctgttctcaactttgacattatccaagtccataaaaaattaagacgaactgtactaataat |
219 |
Q |
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| T |
44829649 |
gaaagagaatgcttcatgtaaggagacagaagagccattctgttctcaactttgacattatccaagtccataaaaaattaagaggaactgtactaataat |
44829748 |
T |
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| Q |
220 |
agttcctaaaaaacaacttaataaactcaacatagagattaaaatgttcacatttccccctcaatttatagtggaaagtaagaagaataatcatgtagaa |
319 |
Q |
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| T |
44829749 |
agttcctaaaaaacaacttaataaactcaacatagagattaaaatgttcacatttccccctcaatttatagtggaaagtaagaagaataatcatgtagaa |
44829848 |
T |
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| Q |
320 |
aacataattacacataactatatacaaaatttcaaagaattaacaatcaaattgaactcactttaatcgactcagctcgttcattttggatttgcttttt |
419 |
Q |
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| T |
44829849 |
aacataattacacataactatatacaaaatttcaaagaattaacaaccaaattgaactcactttaatcgactcagctcgttcattttggatttgcttttt |
44829948 |
T |
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| Q |
420 |
caccaaatgtatcttgttcgtcaaggtttgacgagtgattgtcgctccccctccatgtttttcctatccatacaataagtattat |
504 |
Q |
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| T |
44829949 |
caccaaatgtatcttgttcgtcaaggtttgacgagtgattgtcgctccccctccatgttttgcctatccatacaataagtattat |
44830033 |
T |
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