View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14586_high_26 (Length: 240)
Name: NF14586_high_26
Description: NF14586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14586_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 4478737 - 4478912
Alignment:
| Q |
64 |
gtattcttttttgcttacacaaagtccaaactat----tcatctgctatccctcattaaagcatagaatttaggtttgtagcttaaacatcacattccac |
159 |
Q |
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| T |
4478737 |
gtattcttttttgcttacccaaagtccaaactataatttcatctgctatccctcattaaagcatagaatttaggtttgtagcttaaacatcacattccac |
4478836 |
T |
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| Q |
160 |
aacattaatggttgtatctgtaattacggcatttttagagtaaaagactataccaattcattgactatatatggaa |
235 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4478837 |
aacattaatggttgtatctgtaattacggcatttttagagtaaaagactataccaattcattgactatatatggaa |
4478912 |
T |
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