View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14586_low_16 (Length: 379)
Name: NF14586_low_16
Description: NF14586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14586_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 30 - 362
Target Start/End: Complemental strand, 11782923 - 11782584
Alignment:
| Q |
30 |
agcaaagggacaaatattgatatattatgatgcatctaattactttgtcaactgatataaggataannnnnnn--------attaataacactgaaaaca |
121 |
Q |
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| T |
11782923 |
agcaaagggacaaatattaatatattatg---catctaattactttgtcaactaatataaggattttttttttttttttttattaataacactgaaaaca |
11782827 |
T |
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| Q |
122 |
aaaatttgttccctaaaaataacactaacacaaatgttcatattatagttgtctcaggtgaaattcaaactttaccccttaaaattacaaaatcaaactc |
221 |
Q |
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| T |
11782826 |
aaaatttgttccctaaaaataacactaacacaaatgttcatattatggttgtctcaggtgaaattcaaactttaccccttaaaattacaaaatcaaactc |
11782727 |
T |
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| Q |
222 |
taaccatagcttaattaaaaagtcaaactctaacagatgaac----tacatttcttgaacaactaatggaatgataaaataatactatagtcaagtgatt |
317 |
Q |
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| T |
11782726 |
taaccatagctgaattaaaaagtcaaactctaacagatgaactacgtacatttcttgaacaac--atagaatgataaaataatactatagtcaagtgatt |
11782629 |
T |
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| Q |
318 |
ttattgaaaaatatacactcaataaaattgtttagacttgaaaac |
362 |
Q |
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| T |
11782628 |
ttattgaaaaatatacactcaataaaattgtttagacttgaaaac |
11782584 |
T |
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