View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14586_low_19 (Length: 316)
Name: NF14586_low_19
Description: NF14586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14586_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 18 - 302
Target Start/End: Complemental strand, 45201514 - 45201230
Alignment:
| Q |
18 |
aagtgtctggtttaacaatacggtcattatcacaattgagctaggtaagtgcataaatttgtacaaaatgaagaaaattaattgggcaacatctctacaa |
117 |
Q |
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| T |
45201514 |
aagtgtctggtttaacaatacggtcattatcacaattgagctaggtaagtgcataaatttgtacaaaatgaagaaaattaattgggcaacatctctacaa |
45201415 |
T |
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| Q |
118 |
aatgtttatatcacgaatttatagcttatggccacgagtatggttgttagtcttaatatgtgtcaattagctattacaatgcacgttgnnnnnnncaaat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |
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| T |
45201414 |
aatgtttatatcacgaatttatagcttatggccacgagtatggttgttagtcttaatatgtgtcaattacctattacaatgcacgttgtttttttcaaat |
45201315 |
T |
|
| Q |
218 |
gtagtgtagttagatctaaggacaatgaattgccacatgcatgaaacaatttaatggcataaacaaagtcaaaacaaaacccaca |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
45201314 |
gtagtgtagttagatctaaggacaatgaattgccacatgcatgaaacaatttaatggcatgaacaaagtcaaaacaaaacccaca |
45201230 |
T |
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