View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14586_low_22 (Length: 305)
Name: NF14586_low_22
Description: NF14586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14586_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 20 - 298
Target Start/End: Original strand, 35175825 - 35176103
Alignment:
| Q |
20 |
tctagctccctttgtctcatccttcaccatttgcttctccattttcttcctttcttgccttacaagttacaacctcctcttttgttccatccttagtgct |
119 |
Q |
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| T |
35175825 |
tctagctccctttgtctcatccttcaccatttgcttctccattttcttcctttcttgccttacaagttacaacctcctcttttgttccatccttagtgct |
35175924 |
T |
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| Q |
120 |
ataaataagaaaacaaactttgttttcggattgtttggtatttggttcaatgtaatgtaagacacgtggtgatcaaggagtgttttatggacacatggct |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35175925 |
ataaataagaaaacaaactttgttttcggattgtttggtatttggttcaatgtaatgtaagacacgtggtgatcaaggagtgttttatggacacatggct |
35176024 |
T |
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| Q |
220 |
tctttatagaacttttccatttccattctcaagatgattaatcaaccaattaaaccttgttaccggttttatgtctgtg |
298 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35176025 |
tctttatagaacttttccatttccatcctcaagatgattaatcaaccaattaaaccttgttaccggttttatgtttgtg |
35176103 |
T |
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