View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14586_low_32 (Length: 242)

Name: NF14586_low_32
Description: NF14586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14586_low_32
NF14586_low_32
[»] chr2 (53 HSPs)
chr2 (104-242)||(18997101-18997239)
chr2 (104-242)||(38910701-38910839)
chr2 (105-242)||(37009022-37009159)
chr2 (105-221)||(34173073-34173189)
chr2 (105-242)||(40020664-40020801)
chr2 (128-220)||(33146634-33146726)
chr2 (106-217)||(11563647-11563758)
chr2 (108-219)||(11796170-11796281)
chr2 (105-220)||(13873343-13873457)
chr2 (105-220)||(14013468-14013582)
chr2 (104-200)||(7939945-7940041)
chr2 (128-220)||(37198974-37199066)
chr2 (133-219)||(64368-64455)
chr2 (128-219)||(11563847-11563938)
chr2 (125-220)||(24387048-24387143)
chr2 (128-218)||(15006480-15006570)
chr2 (128-194)||(26196084-26196150)
chr2 (128-242)||(31597725-31597839)
chr2 (105-178)||(34248036-34248109)
chr2 (105-189)||(10357083-10357167)
chr2 (129-242)||(20126071-20126184)
chr2 (128-220)||(5474674-5474766)
chr2 (105-189)||(11051586-11051670)
chr2 (128-200)||(31363944-31364016)
chr2 (105-220)||(3044955-3045070)
chr2 (105-220)||(22606343-22606458)
chr2 (105-242)||(16111076-16111213)
chr2 (132-218)||(38972518-38972604)
chr2 (125-219)||(40768881-40768975)
chr2 (125-178)||(11942911-11942964)
chr2 (105-178)||(17829078-17829151)
chr2 (105-178)||(20894254-20894327)
chr2 (128-183)||(32879381-32879437)
chr2 (104-187)||(36451593-36451676)
chr2 (128-194)||(5113652-5113718)
chr2 (128-186)||(16599575-16599633)
chr2 (108-178)||(35899168-35899238)
chr2 (104-178)||(41078132-41078206)
chr2 (128-174)||(41521645-41521691)
chr2 (105-219)||(44332107-44332221)
chr2 (105-178)||(552481-552554)
chr2 (104-189)||(1534611-1534696)
chr2 (105-178)||(4437339-4437412)
chr2 (108-153)||(15890705-15890750)
chr2 (108-189)||(18467807-18467888)
chr2 (128-188)||(14743091-14743151)
chr2 (6-46)||(18997297-18997337)
chr2 (128-242)||(31709646-31709761)
chr2 (104-178)||(24758144-24758218)
chr2 (129-178)||(8726777-8726826)
chr2 (105-146)||(22606988-22607029)
chr2 (105-146)||(40769375-40769416)
chr2 (104-144)||(35954002-35954042)
[»] chr3 (68 HSPs)
chr3 (105-242)||(49764520-49764657)
chr3 (105-219)||(1262991-1263105)
chr3 (105-242)||(27255883-27256020)
chr3 (105-220)||(3089780-3089895)
chr3 (105-219)||(7725338-7725452)
chr3 (105-242)||(18365190-18365327)
chr3 (105-242)||(48224046-48224183)
chr3 (105-220)||(27638505-27638620)
chr3 (105-220)||(32255656-32255771)
chr3 (105-220)||(33115165-33115280)
chr3 (128-242)||(44950895-44951009)
chr3 (105-242)||(47794013-47794150)
chr3 (104-220)||(14600956-14601072)
chr3 (128-220)||(32373349-32373441)
chr3 (105-220)||(13625836-13625951)
chr3 (105-220)||(40927523-40927638)
chr3 (104-242)||(20029933-20030070)
chr3 (134-220)||(30128197-30128283)
chr3 (108-217)||(43184687-43184797)
chr3 (105-218)||(32737104-32737217)
chr3 (104-189)||(37973467-37973552)
chr3 (104-220)||(11581865-11581981)
chr3 (105-220)||(16067826-16067941)
chr3 (105-220)||(48841545-48841660)
chr3 (104-242)||(4757024-4757162)
chr3 (105-219)||(11344721-11344835)
chr3 (105-187)||(14602074-14602156)
chr3 (105-218)||(10887740-10887853)
chr3 (104-189)||(37183107-37183192)
chr3 (104-188)||(25259901-25259985)
chr3 (128-220)||(25481127-25481219)
chr3 (105-189)||(49080571-49080655)
chr3 (105-188)||(23309583-23309666)
chr3 (104-242)||(6293235-6293373)
chr3 (108-242)||(11055824-11055958)
chr3 (128-242)||(34667960-34668074)
chr3 (104-178)||(40974065-40974139)
chr3 (105-178)||(4558062-4558135)
chr3 (104-189)||(33979243-33979328)
chr3 (105-178)||(41865658-41865730)
chr3 (128-187)||(5963110-5963169)
chr3 (108-187)||(22129720-22129799)
chr3 (104-174)||(1763672-1763742)
chr3 (129-242)||(10689371-10689484)
chr3 (105-187)||(19345275-19345356)
chr3 (128-178)||(19538339-19538389)
chr3 (128-178)||(45307331-45307381)
chr3 (105-178)||(2756580-2756653)
chr3 (105-178)||(22524148-22524221)
chr3 (105-242)||(27394984-27395121)
chr3 (105-174)||(28248132-28248201)
chr3 (105-222)||(53490079-53490195)
chr3 (104-173)||(54606402-54606471)
chr3 (131-223)||(32221659-32221751)
chr3 (130-242)||(54404140-54404252)
chr3 (141-220)||(5984870-5984949)
chr3 (105-148)||(13623205-13623248)
chr3 (132-178)||(27517191-27517237)
chr3 (105-147)||(28247536-28247578)
chr3 (104-154)||(30605343-30605393)
chr3 (128-178)||(40035790-40035840)
chr3 (128-220)||(1363435-1363527)
chr3 (105-146)||(11397617-11397658)
chr3 (128-220)||(41586700-41586789)
chr3 (141-242)||(44499396-44499497)
chr3 (105-154)||(44500040-44500089)
chr3 (105-146)||(45241231-45241272)
chr3 (104-144)||(33114632-33114672)
[»] scaffold0201 (1 HSPs)
scaffold0201 (104-220)||(15926-16042)
[»] chr5 (46 HSPs)
chr5 (105-242)||(8572727-8572864)
chr5 (105-220)||(27028572-27028687)
chr5 (105-219)||(9017675-9017789)
chr5 (105-220)||(15175233-15175348)
chr5 (104-242)||(13280056-13280194)
chr5 (105-215)||(32458449-32458559)
chr5 (105-218)||(19408567-19408680)
chr5 (128-242)||(17780923-17781038)
chr5 (128-220)||(6031280-6031372)
chr5 (105-220)||(31476896-31477011)
chr5 (128-218)||(12548362-12548452)
chr5 (105-219)||(35751544-35751658)
chr5 (104-189)||(27979862-27979947)
chr5 (104-217)||(42598922-42599035)
chr5 (105-189)||(1405565-1405649)
chr5 (121-220)||(15144456-15144556)
chr5 (104-187)||(9118862-9118945)
chr5 (105-220)||(21639046-21639161)
chr5 (105-219)||(20259361-20259475)
chr5 (128-242)||(30782764-30782878)
chr5 (128-189)||(20570790-20570851)
chr5 (105-218)||(37334521-37334634)
chr5 (108-220)||(5138330-5138441)
chr5 (104-187)||(6048012-6048095)
chr5 (132-242)||(4054781-4054891)
chr5 (104-174)||(5345109-5345179)
chr5 (128-242)||(12586183-12586297)
chr5 (128-242)||(31850570-31850683)
chr5 (131-189)||(40027462-40027520)
chr5 (105-178)||(4877348-4877421)
chr5 (108-189)||(36742544-36742625)
chr5 (105-178)||(37658048-37658121)
chr5 (105-189)||(1199707-1199791)
chr5 (128-216)||(14594679-14594766)
chr5 (105-220)||(20691729-20691844)
chr5 (124-178)||(3933353-3933407)
chr5 (146-200)||(8438357-8438411)
chr5 (105-183)||(20183388-20183466)
chr5 (151-223)||(3079888-3079960)
chr5 (128-220)||(8007112-8007204)
chr5 (105-161)||(20570156-20570212)
chr5 (128-219)||(17967870-17967961)
chr5 (104-222)||(6734086-6734204)
chr5 (128-178)||(27301911-27301961)
chr5 (128-200)||(13686573-13686645)
chr5 (125-218)||(20540348-20540441)
[»] chr4 (68 HSPs)
chr4 (105-242)||(721350-721487)
chr4 (105-242)||(755436-755573)
chr4 (105-242)||(17201854-17201991)
chr4 (108-223)||(37423811-37423926)
chr4 (104-242)||(13482709-13482847)
chr4 (128-220)||(4950527-4950619)
chr4 (105-189)||(26705632-26705716)
chr4 (104-220)||(30192536-30192652)
chr4 (134-242)||(54092231-54092339)
chr4 (105-220)||(7796974-7797089)
chr4 (105-220)||(35667688-35667803)
chr4 (128-242)||(37735389-37735503)
chr4 (105-222)||(33032188-33032305)
chr4 (105-189)||(28464229-28464313)
chr4 (105-220)||(50824656-50824771)
chr4 (104-223)||(26808976-26809094)
chr4 (105-219)||(7166011-7166125)
chr4 (128-222)||(55814367-55814461)
chr4 (105-178)||(16960233-16960306)
chr4 (131-220)||(35854161-35854250)
chr4 (125-189)||(29979672-29979736)
chr4 (105-220)||(13771746-13771861)
chr4 (105-200)||(35667235-35667330)
chr4 (105-196)||(44665141-44665232)
chr4 (105-219)||(4649633-4649746)
chr4 (129-223)||(8138921-8139015)
chr4 (105-187)||(13395217-13395299)
chr4 (128-242)||(18362111-18362225)
chr4 (128-242)||(36600702-36600816)
chr4 (104-178)||(45847162-45847236)
chr4 (105-218)||(6233037-6233150)
chr4 (105-218)||(8192924-8193037)
chr4 (104-189)||(10155530-10155615)
chr4 (105-178)||(19313987-19314060)
chr4 (105-218)||(23308826-23308939)
chr4 (104-189)||(33047192-33047277)
chr4 (128-189)||(49621310-49621371)
chr4 (105-189)||(17722778-17722862)
chr4 (104-220)||(17729538-17729654)
chr4 (125-189)||(19854767-19854831)
chr4 (104-188)||(46490071-46490155)
chr4 (104-219)||(36651203-36651317)
chr4 (105-220)||(37423171-37423286)
chr4 (164-242)||(6711799-6711877)
chr4 (105-218)||(796411-796524)
chr4 (132-191)||(22474891-22474950)
chr4 (105-220)||(37708803-37708918)
chr4 (128-223)||(46076903-46076998)
chr4 (105-220)||(46095434-46095549)
chr4 (105-187)||(47030447-47030529)
chr4 (128-178)||(55069488-55069538)
chr4 (105-174)||(35667544-35667613)
chr4 (125-186)||(36897506-36897567)
chr4 (128-189)||(47931193-47931254)
chr4 (105-178)||(49702404-49702477)
chr4 (128-220)||(9784637-9784729)
chr4 (104-220)||(23721407-23721522)
chr4 (128-178)||(32448325-32448375)
chr4 (105-148)||(35667385-35667428)
chr4 (105-174)||(616109-616178)
chr4 (104-146)||(4949961-4950003)
chr4 (132-178)||(12251326-12251372)
chr4 (105-147)||(21037326-21037368)
chr4 (128-178)||(42074404-42074454)
chr4 (105-146)||(16192321-16192362)
chr4 (105-146)||(36898105-36898146)
chr4 (105-178)||(56310041-56310113)
chr4 (105-145)||(35853586-35853626)
[»] chr7 (59 HSPs)
chr7 (128-220)||(46010502-46010594)
chr7 (108-219)||(11640912-11641023)
chr7 (105-242)||(43450127-43450264)
chr7 (105-220)||(48982470-48982585)
chr7 (128-220)||(19156007-19156099)
chr7 (128-220)||(20755406-20755498)
chr7 (105-220)||(8122655-8122770)
chr7 (105-220)||(42813510-42813625)
chr7 (107-220)||(20261034-20261147)
chr7 (104-223)||(16425364-16425483)
chr7 (105-220)||(22712235-22712350)
chr7 (104-219)||(38790673-38790788)
chr7 (128-242)||(22263814-22263928)
chr7 (128-219)||(19332424-19332515)
chr7 (104-186)||(8535399-8535481)
chr7 (105-199)||(36687324-36687418)
chr7 (132-242)||(38988328-38988438)
chr7 (128-242)||(40400953-40401067)
chr7 (105-242)||(5228548-5228685)
chr7 (105-222)||(32388077-32388194)
chr7 (105-242)||(35783390-35783527)
chr7 (128-220)||(13904364-13904456)
chr7 (105-219)||(317306-317420)
chr7 (134-220)||(40402135-40402221)
chr7 (105-218)||(25284-25397)
chr7 (105-242)||(2146064-2146201)
chr7 (105-178)||(2935734-2935807)
chr7 (104-189)||(19435258-19435343)
chr7 (128-220)||(36847883-36847975)
chr7 (135-242)||(7192128-7192235)
chr7 (150-220)||(19155934-19156004)
chr7 (150-220)||(20755333-20755403)
chr7 (105-187)||(23742623-23742705)
chr7 (104-178)||(25607585-25607659)
chr7 (105-218)||(34999213-34999325)
chr7 (104-219)||(5951678-5951791)
chr7 (105-185)||(28308025-28308105)
chr7 (105-189)||(38670646-38670730)
chr7 (128-178)||(14078407-14078457)
chr7 (128-178)||(14388435-14388485)
chr7 (105-178)||(1573106-1573178)
chr7 (105-178)||(3340801-3340874)
chr7 (133-178)||(26903217-26903262)
chr7 (105-242)||(32867812-32867949)
chr7 (128-188)||(12677706-12677766)
chr7 (128-188)||(12679601-12679661)
chr7 (105-184)||(48872644-48872721)
chr7 (128-223)||(29103572-29103667)
chr7 (118-220)||(39186826-39186929)
chr7 (128-178)||(2790909-2790959)
chr7 (140-242)||(11696781-11696883)
chr7 (154-220)||(23233422-23233488)
chr7 (154-220)||(23243083-23243149)
chr7 (104-178)||(29823357-29823431)
chr7 (108-173)||(27144212-27144277)
chr7 (128-189)||(31220849-31220910)
chr7 (104-184)||(34835447-34835527)
chr7 (132-188)||(6184706-6184762)
chr7 (105-189)||(40343786-40343870)
[»] chr1 (52 HSPs)
chr1 (105-220)||(51362418-51362533)
chr1 (104-242)||(42830564-42830702)
chr1 (104-242)||(43319942-43320080)
chr1 (105-242)||(16536930-16537067)
chr1 (105-242)||(41575922-41576058)
chr1 (104-242)||(27226235-27226373)
chr1 (104-242)||(19072268-19072406)
chr1 (104-242)||(19120158-19120296)
chr1 (128-242)||(19997654-19997768)
chr1 (129-242)||(36511453-36511566)
chr1 (120-220)||(125003-125103)
chr1 (104-220)||(29510410-29510526)
chr1 (128-218)||(794681-794771)
chr1 (105-242)||(17109927-17110063)
chr1 (105-218)||(23739750-23739863)
chr1 (105-242)||(38011763-38011900)
chr1 (104-220)||(46682701-46682817)
chr1 (128-220)||(47553187-47553279)
chr1 (125-220)||(7307006-7307101)
chr1 (104-219)||(36605333-36605448)
chr1 (128-178)||(13574136-13574186)
chr1 (128-242)||(45195148-45195262)
chr1 (105-178)||(11916478-11916551)
chr1 (124-189)||(31765965-31766030)
chr1 (126-242)||(44645844-44645960)
chr1 (135-242)||(4666932-4667039)
chr1 (105-200)||(47233666-47233761)
chr1 (105-219)||(8061053-8061167)
chr1 (132-242)||(25068916-25069026)
chr1 (104-242)||(33126211-33126349)
chr1 (104-178)||(51611826-51611900)
chr1 (105-218)||(1845887-1846000)
chr1 (105-178)||(15356961-15357034)
chr1 (105-218)||(41321540-41321653)
chr1 (128-220)||(47141250-47141340)
chr1 (104-220)||(18407133-18407249)
chr1 (126-242)||(44649200-44649316)
chr1 (105-220)||(45738597-45738717)
chr1 (128-220)||(50143983-50144075)
chr1 (108-174)||(47216828-47216894)
chr1 (125-178)||(12048390-12048443)
chr1 (105-178)||(27931279-27931352)
chr1 (128-189)||(41575224-41575285)
chr1 (128-223)||(2275711-2275806)
chr1 (128-220)||(49129055-49129147)
chr1 (104-223)||(28045074-28045192)
chr1 (128-220)||(29344571-29344660)
chr1 (105-178)||(6851826-6851899)
chr1 (105-146)||(18406557-18406598)
chr1 (104-153)||(22182988-22183037)
chr1 (154-223)||(25991346-25991415)
chr1 (104-178)||(33475670-33475746)
[»] scaffold0368 (1 HSPs)
scaffold0368 (104-242)||(10620-10758)
[»] chr8 (52 HSPs)
chr8 (105-220)||(30353874-30353989)
chr8 (105-219)||(11759418-11759532)
chr8 (128-242)||(44746749-44746863)
chr8 (105-242)||(33972329-33972466)
chr8 (105-220)||(14880120-14880235)
chr8 (105-220)||(32905259-32905374)
chr8 (128-219)||(17565271-17565362)
chr8 (105-223)||(24778018-24778136)
chr8 (128-242)||(44283746-44283860)
chr8 (104-220)||(8437926-8438042)
chr8 (128-220)||(37265546-37265638)
chr8 (105-220)||(26928218-26928333)
chr8 (105-178)||(6099368-6099441)
chr8 (105-242)||(31846477-31846614)
chr8 (129-218)||(34679859-34679947)
chr8 (105-222)||(39998400-39998517)
chr8 (128-220)||(40298972-40299062)
chr8 (105-189)||(32904182-32904266)
chr8 (128-220)||(34364515-34364607)
chr8 (108-219)||(13421999-13422110)
chr8 (105-242)||(22934319-22934456)
chr8 (117-178)||(34923883-34923944)
chr8 (105-217)||(14363805-14363917)
chr8 (128-220)||(25954035-25954127)
chr8 (128-242)||(21304016-21304131)
chr8 (105-220)||(29459190-29459305)
chr8 (128-242)||(37837486-37837601)
chr8 (128-219)||(41262697-41262788)
chr8 (108-186)||(14093514-14093592)
chr8 (127-241)||(24810167-24810281)
chr8 (105-187)||(40791720-40791802)
chr8 (104-220)||(17496858-17496973)
chr8 (104-189)||(25485389-25485474)
chr8 (105-178)||(29636360-29636433)
chr8 (104-189)||(43764107-43764192)
chr8 (128-219)||(13440069-13440160)
chr8 (128-219)||(4256612-4256703)
chr8 (108-187)||(8297767-8297846)
chr8 (128-219)||(8442709-8442800)
chr8 (105-188)||(10216099-10216182)
chr8 (104-226)||(35366341-35366463)
chr8 (105-242)||(3075162-3075299)
chr8 (105-242)||(3075336-3075473)
chr8 (105-222)||(37304822-37304939)
chr8 (105-189)||(25598421-25598504)
chr8 (128-219)||(31739562-31739654)
chr8 (104-147)||(4855939-4855982)
chr8 (104-146)||(17564697-17564739)
chr8 (105-218)||(6292544-6292657)
chr8 (120-152)||(4892148-4892180)
chr8 (105-177)||(8628026-8628098)
chr8 (105-173)||(11140124-11140192)
[»] chr6 (47 HSPs)
chr6 (104-219)||(32522436-32522551)
chr6 (106-219)||(2091716-2091829)
chr6 (105-220)||(34794454-34794569)
chr6 (105-178)||(31881868-31881941)
chr6 (128-220)||(2523269-2523361)
chr6 (105-189)||(12693873-12693957)
chr6 (105-217)||(21801966-21802078)
chr6 (128-220)||(33950276-33950368)
chr6 (108-215)||(28494825-28494932)
chr6 (108-215)||(29807234-29807341)
chr6 (105-218)||(188367-188480)
chr6 (104-220)||(16326002-16326118)
chr6 (104-220)||(16349400-16349516)
chr6 (128-219)||(32003796-32003887)
chr6 (104-218)||(9240885-9240999)
chr6 (105-218)||(7127591-7127704)
chr6 (105-218)||(12026131-12026244)
chr6 (105-189)||(10702298-10702382)
chr6 (128-240)||(24619958-24620070)
chr6 (105-183)||(14313818-14313896)
chr6 (108-218)||(34280615-34280725)
chr6 (105-178)||(5443038-5443111)
chr6 (105-218)||(12033051-12033164)
chr6 (105-242)||(14873045-14873182)
chr6 (105-178)||(32113766-32113839)
chr6 (105-189)||(2655546-2655630)
chr6 (105-196)||(17312054-17312145)
chr6 (105-187)||(11522827-11522909)
chr6 (105-219)||(22021999-22022113)
chr6 (137-242)||(12026281-12026385)
chr6 (137-242)||(12033201-12033305)
chr6 (105-178)||(25527757-25527830)
chr6 (105-218)||(25577135-25577248)
chr6 (125-242)||(33276319-33276435)
chr6 (127-178)||(31281662-31281714)
chr6 (108-242)||(4100545-4100684)
chr6 (104-178)||(6936401-6936475)
chr6 (105-200)||(26391423-26391518)
chr6 (105-152)||(30461468-30461515)
chr6 (104-151)||(34793888-34793935)
chr6 (132-218)||(3767680-3767766)
chr6 (105-242)||(28712933-28713070)
chr6 (125-159)||(33266723-33266757)
chr6 (154-242)||(4125958-4126046)
chr6 (104-191)||(11722000-11722085)
chr6 (104-219)||(32130963-32131078)
chr6 (128-184)||(34250113-34250168)
[»] scaffold0712 (1 HSPs)
scaffold0712 (109-223)||(3683-3797)
[»] scaffold0709 (1 HSPs)
scaffold0709 (109-223)||(3703-3817)
[»] scaffold0003 (2 HSPs)
scaffold0003 (104-223)||(14076-14195)
scaffold0003 (105-220)||(421861-421976)
[»] scaffold1192 (1 HSPs)
scaffold1192 (104-221)||(187-304)
[»] scaffold0361 (1 HSPs)
scaffold0361 (105-220)||(16513-16628)
[»] scaffold0004 (1 HSPs)
scaffold0004 (128-242)||(351846-351960)
[»] scaffold0289 (1 HSPs)
scaffold0289 (128-220)||(3459-3551)
[»] scaffold0105 (1 HSPs)
scaffold0105 (105-218)||(19580-19693)
[»] scaffold0115 (1 HSPs)
scaffold0115 (105-189)||(31316-31400)
[»] scaffold0340 (1 HSPs)
scaffold0340 (104-223)||(12788-12907)
[»] scaffold2113 (1 HSPs)
scaffold2113 (105-187)||(754-836)
[»] scaffold0695 (1 HSPs)
scaffold0695 (108-186)||(2855-2933)
[»] scaffold0102 (1 HSPs)
scaffold0102 (128-178)||(26976-27026)
[»] scaffold0051 (1 HSPs)
scaffold0051 (128-189)||(11019-11080)
[»] scaffold0036 (1 HSPs)
scaffold0036 (128-189)||(25846-25907)
[»] scaffold0001 (1 HSPs)
scaffold0001 (139-178)||(184616-184655)
[»] scaffold0098 (1 HSPs)
scaffold0098 (105-162)||(34304-34361)
[»] scaffold0136 (1 HSPs)
scaffold0136 (108-148)||(819-858)


Alignment Details
Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 18997239 - 18997101
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| ||    
T  18997239 tttgaattacacttccctcatattttatgttaaaatatacacttctctctcctcttatttaaaatatattagaaaatatttcacttatctcccttgagag 18997140  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  18997139 caacttgaattacattctccacctcttttatgttaaaat 18997101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 38910701 - 38910839
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||| ||| ||||||||| ||||||||||| ||  ||||||||||  ||||||||| ||    
T  38910701 tttgaattacactcccctcctctcttatgttaaaatatacacttcactcccctcttattcaaaacatattataagatatttcactcccctcccttgagag 38910800  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | |||||||||||||| || || ||| |||||||||||    
T  38910801 aagcttgaattacattccccgcccattctatgttaaaat 38910839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 37009022 - 37009159
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||  ||||||||| ||     
T  37009022 ttgaattacactcccctcccctcttatgttaaaatatacacttctctcccctcttatttaaaacatattaaaaaatatgtcactcccctcccttgagaga 37009121  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | ||||||||||||||  | ||  ||||||||||||||    
T  37009122 agcttgaattacattcctctccccttttatgttaaaat 37009159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 34173073 - 34173189
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  34173073 ttgaattacactaccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagaga 34173172  T
Q  205 aacttgaattacattct 221  Q
    | |||||||||||||||    
T  34173173 agcttgaattacattct 34173189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 40020801 - 40020664
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||| ||||||| |  || ||||||||||||||||||||| ||| |||||| || ||||||||||||||| ||||||||||  ||||||||| ||     
T  40020801 ttgaattatacttcccacccctcttatgttaaaatatacacttcactcccctctttttcaaaacatattagaaaatatttcactcccctcccttgagaga 40020702  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| |  ||| | ||||||||||||    
T  40020701 agcttgaattacattcccttcctctcttatgttaaaat 40020664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 33146726 - 33146634
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | ||||||||||||||    
T  33146726 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagagaagcttgaattacattc 33146634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 11563647 - 11563758
Alignment:
Q  106 tgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagca 205  Q
    ||||||||||| ||||   || ||||||||||||||||||||| ||| ||||||| | ||||||||||||||| |||||| |||||||||||||  || |    
T  11563647 tgaattacactcccctaccctcttatgttaaaatatacacttccctcccctcttaatcaaaacatattagaaaatatttctctcatctcccttgcgagaa 11563746  T
Q  206 acttgaattaca 217  Q
     |||||||||||    
T  11563747 gcttgaattaca 11563758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 11796170 - 11796281
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||| |||||  || |||||||||||| |||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | |    
T  11796170 aattacactcccctcccctcttatgttaaaatgtacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgatagaagc 11796269  T
Q  208 ttgaattacatt 219  Q
    ||||||||||||    
T  11796270 ttgaattacatt 11796281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 13873343 - 13873457
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||| |||||||| || ||||||||||||||||||| | |||  |||||||| ||||||||||||||| |||||||| |  ||||||||| ||     
T  13873343 ttgaattacaattccctcacctcttatgttaaaatatacactcccctcctctcttattcaaaacatattagaaaatatttcac-cccctcccttgagaga 13873441  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  13873442 agcttgaattacattc 13873457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 14013468 - 14013582
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||| |||||||| || ||||||||||||||||||| | |||  |||||||| ||||||||||||||| |||||||| |  ||||||||| ||     
T  14013468 ttgaattacaattccctcacctcttatgttaaaatatacactcccctcctctcttattcaaaacatattagaaaatatttcac-cccctcccttgagaga 14013566  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  14013567 agcttgaattacattc 14013582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 7940041 - 7939945
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttga 200  Q
    |||||||||||||  ||||  |||||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||| ||  |||||||||    
T  7940041 tttgaattacactctcctccccttttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcattcccctcccttga 7939945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 37198974 - 37199066
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | ||| ||||||||||    
T  37198974 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagagaagcttaaattacattc 37199066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 64368 - 64455
Alignment:
Q  133 ttaaaatatacacttctctctcctcttatttaaaacatattag-aaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| ||| ||||||||||| ||||||||| || | |||||||||||||    
T  64368 ttaaaatatacacttccctcccctcttattcaaaacatattagaaaaatatttcactcacctcccttgagagaagcttgaattacatt 64455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 11563847 - 11563938
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    |||||||||||||||||||||  || ||||||||| |||||||||| |||| ||||||||||  ||||||||| || | |||||||||||||    
T  11563847 ttatgttaaaatatacacttccttcccctcttattcaaaacatattggaaaatatttcactcccctcccttgagagaagcttgaattacatt 11563938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 24387048 - 24387143
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||| |||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||  | ||| |||||| | ||||||||| ||||    
T  24387048 cttttatattaaaacatacacttccctctcctcttatgtaaaacatattagaaaatatttcactccccacccgtgaaagaagcttgaattatattc 24387143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 15006480 - 15006570
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacat 218  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | ||| ||||||||    
T  15006480 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactctcctcccttgagagaagcttcaattacat 15006570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 26196084 - 26196150
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctc 194  Q
    |||||||||||||||| |||| ||| ||||||||| ||||||||||||||| |||||||||||||||    
T  26196084 ttatgttaaaatatacgcttccctcccctcttattcaaaacatattagaaaatatttcactcatctc 26196150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 31597839 - 31597725
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    |||| |||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||||||||   | |||||| || |||||||||||||||| ||  |     
T  31597839 ttatattaaaatatacacttccctccccttttattcaaaacatattagaaaatatttcactctctttccttgagagaaacttgaattacattcccctacc 31597740  T
Q  228 attttatgttaaaat 242  Q
     ||||||||||||||    
T  31597739 cttttatgttaaaat 31597725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 34248109 - 34248036
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  || ||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  34248109 ttgaattacactcccctcccctcttaagttaaaatatacacttctctcccctcttattcaaaacatattagaaa 34248036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 10357167 - 10357083
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| |||||||||||| || ||||||||||    
T  10357167 ttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattaggaaatatttcactc 10357083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 20126184 - 20126071
Alignment:
Q  129 tatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccaccta 228  Q
    |||||||||||||||||||||||   |||||||| |||| |||||||||| ||||||| ||  ||||| | | || |||||||||||||||| || ||      
T  20126184 tatgttaaaatatacacttctcttctctcttattcaaaatatattagaaaatatttcattctcctcccctaagagaaacttgaattacattcccctcccc 20126085  T
Q  229 ttttatgttaaaat 242  Q
    | ||||||||||||    
T  20126084 tcttatgttaaaat 20126071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 5474674 - 5474766
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||| ||  |||  |||| || | ||||||||||||||    
T  5474674 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcattcccctcttttgagagaagcttgaattacattc 5474766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 11051586 - 11051670
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| ||| | ||| ||||||||||||||||||| | ||| ||||||||| |||||||||||| || | ||||||||    
T  11051586 ttgaattacactccccacctctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagtaattttttcactc 11051670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 31363944 - 31364016
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttga 200  Q
    ||||||||||||||||||||| |||  |||| ||| ||||||||||||||| ||||||||||  |||||||||    
T  31363944 ttatgttaaaatatacacttccctcctctctcattcaaaacatattagaaaatatttcactcccctcccttga 31364016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 3044955 - 3045070
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||| || ||||||||||||||||||| | ||  | ||||||| ||||||||||||||| |||| || |   ||||||||| ||     
T  3044955 ttgaattacactctcctcacctcttatgttaaaatatacactccccttccatcttattcaaaacatattagaaaatattacattaccctcccttgagaga 3045054  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  3045055 agcttgaattacattc 3045070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 22606343 - 22606458
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||  | ||| ||| ||||||||||||||||||||| ||| ||||||||| ||||||| ||| ||| ||| ||||||  ||| ||||| ||     
T  22606343 ttgaattacacacctctcctctcttatgttaaaatatacacttccctcccctcttattcaaaacattttataaaatatatcactcccctcacttgagaga 22606442  T
Q  205 aacttgaattacattc 220  Q
    | |||| |||||||||    
T  22606443 agcttgtattacattc 22606458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 16111213 - 16111076
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattag-aaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||| |||||  || ||| ||||||||||||||||||||| ||||||||| ||||||| |||| |||  |||||||||  ||||| | | ||    
T  16111213 ttgaattacactcccctccactcttaagttaaaatatacacttctctc-cctcttattcaaaacatgttagaaaaaaatttcactcccctcccctaagag 16111115  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | |||||||||||||| || ||  | ||||||||||||    
T  16111114 aagcttgaattacattcccctcccctcttatgttaaaat 16111076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 38972518 - 38972604
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacat 218  Q
    ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | || ||||||||||||||    
T  38972518 gttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagagaaacttgaattacat 38972604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 40768881 - 40768975
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    |||||||||||||||||||||| | ||| |||  |||| ||||||||||||||| ||||||||||  |  | |||| || |||||||||||||||    
T  40768881 cttttatgttaaaatatacactcccctccccttctattcaaaacatattagaaaatatttcactccccatcattgagagaaacttgaattacatt 40768975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 11942964 - 11942911
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||| |||||    
T  11942964 cttttatgttaaaatatacacttccatcccctcttatttaaaacatatgagaaa 11942911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 17829078 - 17829151
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| | |||  || ||||||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  17829078 ttgaattacactccactcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaa 17829151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 20894327 - 20894254
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  20894327 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaa 20894254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 32879437 - 32879381
Alignment:
Q  128 ttatgttaaaatatacacttctctctcc-tcttatttaaaacatattagaaagtatt 183  Q
    |||||||||||||||||||||||||||| | || |||||||||||||||||| ||||    
T  32879437 ttatgttaaaatatacacttctctctcctttttttttaaaacatattagaaaatatt 32879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 36451676 - 36451593
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    ||||||||||||||| |||  |||||||||||||||||||| || |||    ||||||| |||| |||||||||| ||||||||    
T  36451676 tttgaattacacttcactctccttttatgttaaaatatacatttttcttctttcttattcaaaatatattagaaaatatttcac 36451593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 5113652 - 5113718
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctc 194  Q
    |||||||||| ||||||||  |||  |||||||||||||||||||||||||  ||||||||| ||||    
T  5113652 ttatgttaaattatacactcatcttccctcttatttaaaacatattagaaaacatttcactcctctc 5113718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 16599575 - 16599633
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttca 186  Q
    |||||||||||||||||||||  | | |||||||| ||||||||||||||| |||||||    
T  16599575 ttatgttaaaatatacacttccttattctcttattcaaaacatattagaaaatatttca 16599633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 35899168 - 35899238
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  35899168 aattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaa 35899238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 41078206 - 41078132
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||| ||||||  |||| ||| ||||||||||||||||||| | ||| ||||||||| |||||||| ||||||    
T  41078206 tttgaactacactctcctcctctcttatgttaaaatatacactcccctcccctcttattcaaaacataatagaaa 41078132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 41521691 - 41521645
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatatta 174  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||    
T  41521691 ttatgttaaaatatacactcccctcccctcttatttaaaacatatta 41521645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 44332107 - 44332221
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||| ||||||||  || ||||||| ||||||||||||  |||  ||||| || ||||||||||||||| | ||||||||  ||||| | | ||     
T  44332107 ttgaattacccttccctcccctcttatgtttaaatatacactttcctcctctctttttcaaaacatattagaaattttttcactctcctcccctaagaga 44332206  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  44332207 agcttgaattacatt 44332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 552554 - 552481
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  |  ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  552554 ttgaattacactcccctccccccttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaa 552481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 1534696 - 1534611
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||| | ||| ||| |||| || | |||||||||  |||||||||||||| |||||||||| ||||  |||||||||    
T  1534696 tttgaattacactcctctcctctcttatattcatatatacactcatctctcctcttattcaaaacatatttgaaaacatttcactc 1534611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 4437339 - 4437412
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||| ||  || ||||||||||||||||| | | ||  ||||||||| |||||||||||||||    
T  4437339 ttgaattacacttccatcccctcttatgttaaaatatacaatccccttccctcttattcaaaacatattagaaa 4437412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 15890705 - 15890750
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctct 153  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||    
T  15890705 aattacacttccctccccttttatgttaaaatatacactcctctct 15890750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 18467807 - 18467888
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||| ||||   ||||||||||||| ||||||||||  || ||| ||||| |||||| |||||||| ||||||||||    
T  18467807 aattacactccccttcccttttatgttaaattatacacttccatcaccttttattcaaaacagattagaaaatatttcactc 18467888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 14743151 - 14743091
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcact 188  Q
    ||||||||||||||||||||  ||| |||| |||| ||||||||||||||| |||| ||||    
T  14743151 ttatgttaaaatatacactttactcccctcgtattcaaaacatattagaaaatattacact 14743091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 18997337 - 18997297
Alignment:
Q  6 gtccaagaatataggatactttttaatttaaaatttcccct 46  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  18997337 gtccaaaaatataggatattttttaatttaaaatttcccct 18997297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 31709761 - 31709646
Alignment:
Q  128 ttatgttaaaatatacacttctctctcc-tcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacc 226  Q
    ||||||||||||||||| ||  ||| || |||| || ||||||||||||||| ||||| || |  |||| |||| || | |||||||||||||| || ||    
T  31709761 ttatgttaaaatatacattttcctccccctctttttcaaaacatattagaaaatattttacccccctcctttgagagaagcttgaattacattcacctcc 31709662  T
Q  227 tattttatgttaaaat 242  Q
    | | ||||||||||||    
T  31709661 tctcttatgttaaaat 31709646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 24758144 - 24758218
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||| |||| |||| | | ||||||||||||||| ||||  ||  ||||||||| |||||||||||||||    
T  24758144 tttgaattagacttacctcctatcttatgttaaaatatatactttccttccctcttattcaaaacatattagaaa 24758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 8726777 - 8726826
Alignment:
Q  129 tatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||   ||||| ||||||| |||||||||||||||    
T  8726777 tatgttaaaatatacactctcctctcatcttattcaaaacatattagaaa 8726826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 22607029 - 22606988
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    |||||||||||| ||||| ||| |||||||||||||||||||    
T  22607029 ttgaattacactcccctcttctcttatgttaaaatatacact 22606988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 40769416 - 40769375
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    |||||||||||| |||||| || |||||||||||||||||||    
T  40769416 ttgaattacactcccctcacctcttatgttaaaatatacact 40769375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 35954042 - 35954002
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatataca 144  Q
    |||||||||||||||||||  || |||||||||||||||||    
T  35954042 tttgaattacacttccctcccctcttatgttaaaatataca 35954002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 49764520 - 49764657
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  49764520 ttgaattacacttccctcccctcttatgttaaaatatacacttctctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagaga 49764619  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | ||||||||||||||||| ||  | ||||||||||||    
T  49764620 agcttgaattacattctcctcccctcttatgttaaaat 49764657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 219
Target Start/End: Complemental strand, 1263105 - 1262991
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||||  ||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||     
T  1263105 ttgaattacactcccctcccctcttatgttaaaatatacactttcctcccctcttattcaaaacatattagaaaatatttcactcatctcccttgaaaga 1263006  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  1263005 agcttgaattacatt 1262991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 27256020 - 27255883
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || |||| |||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  27256020 ttgaattacactcccctcccctcttatattaaaatatacacttccctcccctattattcaaaacatattagaaaatatttcactcccctcccttgagaga 27255921  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||| ||||||||||||||    
T  27255920 agcttgaattacattcccctccttttttatgttaaaat 27255883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 3089780 - 3089895
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  3089780 ttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagaga 3089879  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  3089880 agcttgaattacattc 3089895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 219
Target Start/End: Complemental strand, 7725452 - 7725338
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| ||| |  || ||||||||||||||||||||| ||| |||||| || ||||||||||||||| ||||||||||  ||||||||| ||     
T  7725452 ttgaattacactccccactcctcttatgttaaaatatacacttcactcccctctttttcaaaacatattagaaaatatttcactcccctcccttgagaga 7725353  T
Q  205 aacttgaattacatt 219  Q
    |||||||||||||||    
T  7725352 aacttgaattacatt 7725338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 18365327 - 18365190
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| |||||||| |  ||||||||| ||     
T  18365327 ttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcacccccctcccttgagaga 18365228  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | ||||||| |||||| || ||| | ||| ||||||||    
T  18365227 agcttgaatcacattcccctcctttcttaagttaaaat 18365190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 48224183 - 48224046
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||   | ||||||||||||||||||||| ||| |||||| || ||||| ||||||||| ||||||||||  ||||||||| ||     
T  48224183 ttgaattacactcccctcccatcttatgttaaaatatacacttccctcccctctttttcaaaacctattagaaaatatttcactctcctcccttgagaga 48224084  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||  | ||||||||||||    
T  48224083 agcttgaattacattcccctcccctcttatgttaaaat 48224046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 27638505 - 27638620
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||||||||| ||||||||||||||||||| | | | |||  |||||||| ||||||||||||||| ||||||||||  |||| |||| ||     
T  27638505 ttgaattacacttccctcctcttttatgttaaaatatatattcccctcctctcttattgaaaacatattagaaaatatttcactcccctcctttgagaga 27638604  T
Q  205 aacttgaattacattc 220  Q
    |  |||||||||||||    
T  27638605 agtttgaattacattc 27638620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 32255771 - 32255656
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||| ||||| |||  |||||||| ||||||||||| ||| ||||||||||| |||  |||| ||     
T  32255771 ttgaattacacttccctctcctcttatgttaaaatatatacttccctccactcttattcaaaacatattataaaatatttcactcacctcttttgagaga 32255672  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  32255671 agcttgaattacattc 32255656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 33115280 - 33115165
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || |||||||||||||||||||| ||||  || ||||| ||||||| ||| ||| ||||||||||  ||||||||| ||     
T  33115280 ttgaattacacttccctcccctcttatgttaaaatatacacttttctccacttttattcaaaacattttaaaaaatatttcactctactcccttgagagt 33115181  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  33115180 agcttgaattacattc 33115165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 44951009 - 44950895
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||||||  ||| ||||||||| |||| |||||||||| |||||||||| |||||||||  || | |||||||||||||| || ||     
T  44951009 ttatgttaaaatatacactttcctcccctcttattcaaaatatattagaaaatatttcactcctctcccttgtgagaagcttgaattacattcccctccc 44950910  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  44950909 ctcttatgttaaaat 44950895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 47794013 - 47794150
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||| || |||| |||||||||||||||   || ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  47794013 ttgaattacactcccctcacctcttatcttaaaatatacactttcttcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagaga 47794112  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    |  |||| |||||||| || |  || ||||||||||||    
T  47794113 agtttgagttacattcccctctcatcttatgttaaaat 47794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 14601072 - 14600956
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||||| || | | ||||||||||||||||||||| ||| ||||||||| ||||||| ||| ||| ||||||||||  |||| |||| ||    
T  14601072 tttgaattacacttccttcctttcttatgttaaaatatacacttccctcccctcttattcaaaacattttaaaaaatatttcactcccctcctttgagag 14600973  T
Q  204 caacttgaattacattc 220  Q
     |  |||||||||||||    
T  14600972 aagtttgaattacattc 14600956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 32373349 - 32373441
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||| ||  ||||||||||||| ||||||||||||||| ||| ||||||  |||| |||| || ||||||||||||||||    
T  32373349 ttatgttaaaatatacattttcctctcctcttattcaaaacatattagaaaatatatcactcccctccattgagagaaacttgaattacattc 32373441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 13625951 - 13625836
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||   | |||||||||||||||| || | ||| ||||||||| ||||||||||||||| |||||| |||  |||||| || ||     
T  13625951 ttgaattacactcccctcccatcttatgttaaaatataccctcccctcccctcttattcaaaacatattagaaaatatttctctcccctccctcgagaga 13625852  T
Q  205 aacttgaattacattc 220  Q
    ||||||||||||||||    
T  13625851 aacttgaattacattc 13625836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 40927523 - 40927638
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||||||| | ||| ||||||||| ||||  ||||||||| |||||||||   ||||||| | ||     
T  40927523 ttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaatttattagaaaatatttcacttccctcccttaagaga 40927622  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  40927623 agcttgaattacattc 40927638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 20029933 - 20030070
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||||| ||  || ||||||||||||||||||| ||||| ||||||||||||||  ||||||||| ||||| |||   ||||||| | ||    
T  20029933 tttgaattacacttccttcgcctcttatgttaaaatatacact-ctctcccctcttatttaaaatttattagaaaatattttacttccctcccttaagag 20030031  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | |||||||||||||| || ||  | ||||||||||||    
T  20030032 aagcttgaattacattcacctcccctcttatgttaaaat 20030070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 30128283 - 30128197
Alignment:
Q  134 taaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||| ||  ||||||||| ||||||||||||||| |||||||||  |||||||||| || | ||||||||||||||    
T  30128283 taaaatatacacttcccttccctcttattcaaaacatattagaaaatatttcacttctctcccttgagagaagcttgaattacattc 30128197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 43184687 - 43184797
Alignment:
Q  108 aattacacttccc-tcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaa 206  Q
    ||||||||||||| |  ||||||||||||||||||||| ||  ||  ||||||||| ||||| ||||||| | ||||||||||||||||||||| || |     
T  43184687 aattacacttccccttctcttttatgttaaaatatacattttccttccctcttattcaaaacgtattagagattatttcactcatctcccttgagagaag 43184786  T
Q  207 cttgaattaca 217  Q
    |||||||||||    
T  43184787 cttgaattaca 43184797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 32737217 - 32737104
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||| ||||  |||||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  32737217 ttgaattacactttcctccccttttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 32737118  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  32737117 agcttgaattacat 32737104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 37973467 - 37973552
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||||| | ||  ||||||| |||||||||||| ||||||| ||||||||  ||||||||||||||| ||||||||||    
T  37973467 tttgaattacactttcatccccttttatattaaaatatacaattctctcccctcttatgcaaaacatattagaaattatttcactc 37973552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 11581865 - 11581981
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||| ||| |||  || ||||||||||||||||||| | ||| ||||||||| |||||||||||||||   |||||||| |||||| | | ||    
T  11581865 tttgaattacatttctctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaacttttcactcctctcccctaagag 11581964  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  11581965 aagcttgaattacattc 11581981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 16067941 - 16067826
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| || |  ||| |||||||||||||||||||    || | ||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  16067941 ttgaattacactcccattctctcttatgttaaaatatacactcacatcccttcttattcaaaacatattagaaaatatttcactcccctcccttgagaga 16067842  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  16067841 agcttgaattacattc 16067826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 48841545 - 48841660
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| | |||  || |||||||||| ||||||||   ||| ||||||||| ||||||||||||||| ||||||||||  ||| ||||| ||     
T  48841545 ttgaattacactcctctctcctcttatgttaaattatacactctcctcccctcttattcaaaacatattagaaaatatttcactcccctctcttgagaga 48841644  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  48841645 agcttgaattacattc 48841660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 4757024 - 4757162
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||  ||||  || ||| ||||||||||||||| |  || ||||||||| |||||||||||||||  |||||||||  ||||| | | ||    
T  4757024 tttgaattacactctcctcccctcttaagttaaaatatacactcccatcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagag 4757123  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | ||||||||||||||||| ||  | ||||||||||||    
T  4757124 aagcttgaattacattctcctccactcttatgttaaaat 4757162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 11344721 - 11344835
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||| ||||||||||||    ||| ||||||||| ||||||||||||||| |||||||| |  ||||||||| ||     
T  11344721 ttgaattacactcccctcccctcttatgctaaaatatacaccctcctcccctcttattcaaaacatattagaaaatatttcacccccctcccttgagaga 11344820  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  11344821 agcttgaattacatt 11344835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 14602156 - 14602074
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    ||||||||||||||||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||    
T  14602156 ttgaattacacttccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcac 14602074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 10887740 - 10887853
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  10887740 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 10887839  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  10887840 agcttgaattacat 10887853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 37183107 - 37183192
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||    
T  37183107 tttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactc 37183192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 25259985 - 25259901
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcact 188  Q
    ||||||||||||| ||||| ||||||||||||||||||| |   ||||  ||||||||| |||||||||||||||  ||||||||    
T  25259985 tttgaattacactcccctcctcttttatgttaaaatatatatccctcttccctcttattcaaaacatattagaaaacatttcact 25259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 25481219 - 25481127
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||||| ||| ||  || ||  |||||||||||||| ||||||||||  ||||||||| || | ||||||||||||||    
T  25481219 ttatgttaaaatatacacttccctccccattttttcgaaacatattagaaaatatttcactctcctcccttgagagaagcttgaattacattc 25481127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 49080655 - 49080571
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||| | |||||  || ||||||||||||||||||| | ||| |||||| || ||||||||||||||| ||||||||||    
T  49080655 ttgaattacattcccctcccctcttatgttaaaatatacactcccctcccctcttgttcaaaacatattagaaaatatttcactc 49080571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 23309666 - 23309583
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcact 188  Q
    |||||||||||| ||||| ||| |||  |||||||||||||| | ||| ||||||||| |||||||||||||||  ||||||||    
T  23309666 ttgaattacactcccctcctctcttaacttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcact 23309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 6293235 - 6293373
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||| |||||||  || ||||||||||||||||||| | |||  |||||||| |||| |||||||||  | ||||||||  ||||| | | ||    
T  6293235 tttgaattacatttccctcccctcttatgttaaaatatacactccgctcctctcttattcaaaatatattagaatttttttcactcccctcccctaagag 6293334  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | |||||||||||||| || ||  | ||||||||||||    
T  6293335 aagcttgaattacattcccctcccctcttatgttaaaat 6293373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 11055824 - 11055958
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| || ||||||||||||  |||||||||  ||||| | | || | |    
T  11055824 aattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaatacatattagaaaaaatttcactcccctcccctaagagaagc 11055923  T
Q  208 ttgaattacattctccacctattttatgttaaaat 242  Q
    ||||||||||||| || ||  | ||||||||||||    
T  11055924 ttgaattacattcccctcccctcttatgttaaaat 11055958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 34667960 - 34668074
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    |||||||||||||||||||    ||  |||||||  ||||||||||||||| ||||||||||  | ||| |||||| | |||||||||||||| |||||     
T  34667960 ttatgttaaaatatacactgtcatcctctcttatgcaaaacatattagaaaatatttcactccccacccctgaaagaagcttgaattacattccccaccc 34668059  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  34668060 ctcttatgttaaaat 34668074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 40974065 - 40974139
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||| |||||  || ||||||||||||||||| | | ||| ||||||||| |||||||||||||||    
T  40974065 tttgaattacactcccctcccctcttatgttaaaatatacaatcccctcccctcttattcaaaacatattagaaa 40974139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 4558062 - 4558135
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  4558062 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaa 4558135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 33979328 - 33979243
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||| |||  |||| ||||||||||||||||||| | ||| ||| | | ||||| ||||||||||||||| ||||||||||    
T  33979328 tttgaattatactctcctcctcttttatgttaaaatatatatttccctcccattttattcaaaacatattagaaaatatttcactc 33979243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 41865730 - 41865658
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  |||| | ||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  41865730 ttgaattacactcccctcccctttaa-gttaaaatatacacttccctcccctcttattcaaaacatattagaaa 41865658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 5963110 - 5963169
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| | ||||||    
T  5963110 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaattttttcac 5963169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 22129720 - 22129799
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    ||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||    
T  22129720 aattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcac 22129799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 1763672 - 1763742
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatatta 174  Q
    |||||||||||||| ||||   |||||||||||||||||||||   ||| ||||||||| |||||||||||    
T  1763672 tttgaattacactttcctccctttttatgttaaaatatacactctcctcccctcttattcaaaacatatta 1763742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 10689484 - 10689371
Alignment:
Q  129 tatgttaaaatatacacttctc-tctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    |||||||||||||||| ||||| || ||||||||| ||||||||||||||| |||| || ||  ||||||||| || | ||||||||||| || || |||    
T  10689484 tatgttaaaatataca-ttctcctcccctcttattcaaaacatattagaaaatattacattcccctcccttgagagaagcttgaattacaatcccctcct 10689386  T
Q  228 attttatgttaaaat 242  Q
     | ||| ||||||||    
T  10689385 ctcttaagttaaaat 10689371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 19345275 - 19345356
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    |||||||||||| | |||  || |||||||||| |||||||||| ||| ||||||||  ||||||||||||||| ||||||||    
T  19345275 ttgaattacactccactctcctcttatgttaaa-tatacacttccctcgcctcttatgcaaaacatattagaaaatatttcac 19345356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 19538389 - 19538339
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||||| |||  |||||||| |||||||||||||||    
T  19538389 ttatgttaaaatatacacttccctccactcttattcaaaacatattagaaa 19538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 45307381 - 45307331
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||||| ||| ||||||||| ||| |||||||||||    
T  45307381 ttatgttaaaatatacacttccctcccctcttattcaaagcatattagaaa 45307331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 2756653 - 2756580
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||  | ||||||| |||||||||||||||    
T  2756653 ttgaattacactcccctcccctcttatgttaaaatatacactccccttccatcttattcaaaacatattagaaa 2756580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 22524148 - 22524221
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| | |||  || ||| ||||||| ||||||||| ||| ||||||||| |||||||||||||||    
T  22524148 ttgaattacactcctctcccctcttaagttaaaagatacacttccctcccctcttattcaaaacatattagaaa 22524221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 27395121 - 27394984
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||| | |||||  || ||||||||||||||||||| | ||| || |||||| ||||||||||||||  | ||||||||   | |||| | ||     
T  27395121 ttgaattacattcccctcccctcttatgttaaaatatacactccactccccacttattcaaaacatattagaatatttttcactccatttccttaagaga 27395022  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||  | ||||||||||||    
T  27395021 agcttgaattacattcccctcccttcttatgttaaaat 27394984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 28248201 - 28248132
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatatta 174  Q
    |||||||||||||| ||| | | ||||||||||||||||| || |||| |||||| || |||||||||||    
T  28248201 ttgaattacacttcactcctttcttatgttaaaatatacatttttctcccctcttgttcaaaacatatta 28248132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 53490079 - 53490195
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||  ||  || ||||||||||||||||||  |  || ||||||||| | |||| |||||||| ||||||||||  ||||||||| ||     
T  53490079 ttgaattacacttcattcccctcttatgttaaaatatacacccccttc-cctcttattcacaacagattagaaaatatttcactcccctcccttgagaga 53490177  T
Q  205 aacttgaattacattctc 222  Q
    | ||| ||||||||||||    
T  53490178 agcttcaattacattctc 53490195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 54606471 - 54606402
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatatt 173  Q
    ||||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| ||||| ||||    
T  54606471 tttgaattacactcccctctcctcttatgttaaaatatacactcccctcccctcttattcaaaacttatt 54606402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 32221659 - 32221751
Alignment:
Q  131 tgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcc 223  Q
    |||||||||||||||| |  || ||||||||| |||| ||||||||||  ||||||||| |||||||| | ||    ||||||||||||||||    
T  32221659 tgttaaaatatacactcccatcccctcttattcaaaatatattagaaaacatttcactcctctcccttaagagacgattgaattacattctcc 32221751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 54404252 - 54404140
Alignment:
Q  130 atgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctat 229  Q
    ||||||||||||||| | | ||| ||||||||| |||||||||||||||  |||||| ||  ||||||| | || | ||||||||||| || || ||  |    
T  54404252 atgttaaaatatacattcccctcccctcttattcaaaacatattagaaaaaatttcattcccctcccttaagagaagcttgaattacactcccctcccct 54404153  T
Q  230 tttatgttaaaat 242  Q
     ||||||||||||    
T  54404152 cttatgttaaaat 54404140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 5984949 - 5984870
Alignment:
Q  141 tacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    |||||| | ||| ||| ||||| ||||||||||||||| ||||||| ||  ||||||||| || | ||||||||||||||    
T  5984949 tacactcccctcccctattattcaaaacatattagaaaatatttcattcccctcccttgagagaagcttgaattacattc 5984870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 13623205 - 13623248
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttc 148  Q
    ||||||||||||||||||  || |||||||||||||||||||||    
T  13623205 ttgaattacacttccctcccctcttatgttaaaatatacacttc 13623248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 27517191 - 27517237
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||| |||||||||| ||| ||||||||| |||||||||||||||    
T  27517191 gttaaattatacacttccctcccctcttattcaaaacatattagaaa 27517237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 28247536 - 28247578
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacactt 147  Q
    ||||||||||||||||||  || ||||||||||||||||||||    
T  28247536 ttgaattacacttccctctcctcttatgttaaaatatacactt 28247578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 30605393 - 30605343
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctc 154  Q
    ||||||||||||| |||||  || ||||||||||||||||||||| |||||    
T  30605393 tttgaattacactcccctccactcttatgttaaaatatacacttccctctc 30605343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 40035790 - 40035840
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||| ||| | ||| ||||||||| |||||||||||||||    
T  40035790 ttatgttaaaatatatactcccctcccctcttattcaaaacatattagaaa 40035840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 1363435 - 1363527
Alignment:
Q  128 ttatgttaaaatatacacttct-ctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||| |||| ||| ||||||||| ||| |||||||||||  |||||||||  ||||| | | || | ||||||||||||||    
T  1363435 ttatgttaaaatataca-ttctcctcccctcttattcaaagcatattagaaaacatttcactcccctcccctaagagaagcttgaattacattc 1363527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 11397617 - 11397658
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    ||||||||||||||||||  || |||||||||||||||||||    
T  11397617 ttgaattacacttccctcccctcttatgttaaaatatacact 11397658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 41586700 - 41586789
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| ||| |  |||||||| |||||||||||||||   |||||||| ||| |||| | || | ||||||||||||||    
T  41586700 ttatgttaaaatatacactcctccc--ctcttattcaaaacatattagaaaacttttcactcctct-ccttaagagaagcttgaattacattc 41586789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 44499396 - 44499497
Alignment:
Q  141 tacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattttatgttaaa 240  Q
    |||||||| ||| ||||||||| ||||||||||||||    ||||||||  ||||||| | || | ||||||||||||||  | ||| | ||||||||||    
T  44499396 tacacttccctcccctcttattcaaaacatattagaatacttttcactcccctcccttaagagaagcttgaattacattcatctcctctcttatgttaaa 44499495  T
Q  241 at 242  Q
    ||    
T  44499496 at 44499497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 44500089 - 44500040
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctc 154  Q
    |||||||||||| |||||  || ||||||||||||||||||||| |||||    
T  44500089 ttgaattacactcccctcccctcttatgttaaaatatacacttccctctc 44500040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 45241231 - 45241272
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    |||||||||||| ||||| ||| |||||||||||||||||||    
T  45241231 ttgaattacactcccctcctctcttatgttaaaatatacact 45241272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 33114632 - 33114672
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatataca 144  Q
    |||||||||||||||||| || | |||||||||||||||||    
T  33114632 tttgaattacacttcccttatttcttatgttaaaatataca 33114672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 16042 - 15926
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||| ||||||||||||||| |||||||||   ||||||||||||    
T  16042 tttgaattacacttccctcatctcttatgttaaaatatacagttccctcccctcttattcaaaacatattagaaaatatttcacttccctcccttgaaag 15943  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  15942 aagcttgaattacattc 15926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 8572727 - 8572864
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||  |||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  8572727 ttgaattacactcccctcatctcttatgttaaaatatacacttcactcctctcttattcaaaacatattagaaaatatttcactcccctcccttgagaga 8572826  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | ||| ||||||||||||| ||  |||| |||||||||    
T  8572827 agctttaattacattctcctccccttttttgttaaaat 8572864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 27028687 - 27028572
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| ||||| ||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||  |     
T  27028687 ttgaattacactcccctcctctcttatgttaaaatatatactcctctctcctcttattcaaaacatattagaaaatatttcactcctctcccttgaggga 27028588  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  27028587 agcttgaattacattc 27028572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 9017675 - 9017789
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  9017675 ttgaattacactcccctcccctcttatgttaaaatatacacttccctcccctcttattcaaaacatattagaaaatatttcactctcctcccttgagaga 9017774  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  9017775 agcttgaattacatt 9017789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 15175233 - 15175348
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||||||||| ||| |||||| || ||||||||||||||| ||||||||||  |||| |||| ||     
T  15175233 ttgaattacacttccctcccctcttatgttaaaatatacacttccctcccctctttttcaaaacatattagaaaatatttcactcccctcctttgagaga 15175332  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  15175333 agcttgaattacattc 15175348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 13280194 - 13280056
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| |||||  || ||||||||||||||||||||| ||| || ||||||||||| |||||||||  | |||||||| ||| |||| ||||    
T  13280194 tttgaattacactgccctcccctcttatgttaaaatatacacttccctccccccttatttaaaatatattagaatttttttcactcctcttccttaaaag 13280095  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | ||||||||||||||||| ||  | ||||||||||||    
T  13280094 aagcttgaattacattctcctcccctcttatgttaaaat 13280056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 32458559 - 32458449
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||  ||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  32458559 ttgaattacactctcctccccttttatattaaaatatacactcctctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagaga 32458460  T
Q  205 aacttgaatta 215  Q
    | |||||||||    
T  32458459 agcttgaatta 32458449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 19408567 - 19408680
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||  ||||||||||  ||||||||| ||     
T  19408567 ttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaatatatttcactcccctcccttgagaga 19408666  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  19408667 agcttgaattacat 19408680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 17781038 - 17780923
Alignment:
Q  128 ttatgttaaaatatacacttc-tctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacc 226  Q
    ||||||||||||||||||||| | || ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | |||||||||||||| || |     
T  17781038 ttatgttaaaatatacacttcctatcccctcttattcaaaacatattagaaaatatttcactccactcccttgagagaagcttgaattacattcccctct 17780939  T
Q  227 tattttatgttaaaat 242  Q
      ||||||||||||||    
T  17780938 ccttttatgttaaaat 17780923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 6031372 - 6031280
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||| ||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | ||||||||||||||    
T  6031372 ttatgttaaaatatatactccactcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagagaagcttgaattacattc 6031280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 31477011 - 31476896
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||||   || ||||||||| ||||||||||||||| ||||||||||  ||||||| | ||     
T  31477011 ttgaattacactcccctcccctcttatgttaaaatatacactttcatcccctcttattcaaaacatattagaaaatatttcactcccctcccttaagaga 31476912  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||| ||||    
T  31476911 agcttgaattatattc 31476896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 12548452 - 12548362
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacat 218  Q
    |||||||||||||||||  |||||| |||||||| ||| | |||||||||| |||||||||||||| || |||||| | ||||||||||||    
T  12548452 ttatgttaaaatatacatatctctcccctcttatctaatatatattagaaaatatttcactcatcttccctgaaagaagcttgaattacat 12548362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 35751544 - 35751658
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| || ||  || ||||||||||||||||||| | ||| ||||||| | ||||||||||||||| ||||||||||  |||| |||| ||     
T  35751544 ttgaattacactcccttcccctcttatgttaaaatatacactcccctcccctcttaatcaaaacatattagaaaatatttcactcccctcctttgagaga 35751643  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  35751644 agcttgaattacatt 35751658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 27979947 - 27979862
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||   |||||||| ||||||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||    
T  27979947 tttgaattacaccctcctcatctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactc 27979862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 42599035 - 42598922
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||  ||||  || ||||||||||||||||||||| ||| ||||||||| |||| |||||||||| ||||||||||   |||||| |||     
T  42599035 tttgaattacactctcctccactcttatgttaaaatatacacttccctcccctcttattgaaaatatattagaaaatatttcactcccatcccttaaaaa 42598936  T
Q  204 caacttgaattaca 217  Q
     | |||||||||||    
T  42598935 aagcttgaattaca 42598922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 1405565 - 1405649
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||| ||||||| |||||| || |||||||||||||||||||  |||||||||||||| |||| ||||||| || ||||||||||    
T  1405565 ttgagttacactcccctcacctcttatgttaaaatatacactcatctctcctcttattcaaaatatattaggaaatatttcactc 1405649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 15144456 - 15144556
Alignment:
Q  121 tcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatc-tcccttgaaagcaacttgaattacatt 219  Q
    |||||| ||||||||||||||||||||| ||||||| |||||  |||||||||||||| |||||||| |  | |||||||| || | |||||||||||||    
T  15144456 tcatctcttatgttaaaatatacacttccctctccttttattctaaacatattagaaaatatttcacgccccatcccttgagagaagcttgaattacatt 15144555  T
Q  220 c 220  Q
    |    
T  15144556 c 15144556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 9118862 - 9118945
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    ||||||||||||| || || ||| ||| ||||||||||||||| ||||| ||||||||| |||||||||||||||  |||||||    
T  9118862 tttgaattacactcccttcctctcttaagttaaaatatacactcctctcccctcttattcaaaacatattagaaaaaatttcac 9118945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 21639046 - 21639161
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| | |||  || |||||||||||||||||||   ||| ||||||||| ||||||||||||||| ||||||||||  |||| |||| ||     
T  21639046 ttgaattacactccactcccctcttatgttaaaatatacactctcctcccctcttattcaaaacatattagaaaatatttcactcccctcctttgagaga 21639145  T
Q  205 aacttgaattacattc 220  Q
    | ||| ||||||||||    
T  21639146 agcttcaattacattc 21639161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 20259361 - 20259475
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||| | | ||| ||| |||||||||||||||||||| |||| | ||||||| |||||||||||||||  |||||||||  |||||| || ||     
T  20259361 ttgaattacaatactctcctctcttatgttaaaatatacacttatctcccttcttattcaaaacatattagaaaacatttcactctcctccctcgagaga 20259460  T
Q  205 aacttgaattacatt 219  Q
    |  ||||||||||||    
T  20259461 agtttgaattacatt 20259475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 30782764 - 30782878
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    |||||||||||||||||| |  ||| ||||||||| |||||||||||||||  || ||||||  ||| ||| | || ||||||||||||||||||| ||     
T  30782764 ttatgttaaaatatacacgttcctcccctcttattcaaaacatattagaaaacatatcactcccctctcttaagagaaacttgaattacattctcctccc 30782863  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  30782864 ctcttatgttaaaat 30782878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 20570851 - 20570790
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||    
T  20570851 ttatgttaaaatatacactccactcccctcttattcaaaacatattagaaaatatttcactc 20570790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 37334634 - 37334521
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||   | ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  37334634 ttgaattacacttccctcccttcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 37334535  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  37334534 agcttgaattacat 37334521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 5138330 - 5138441
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||| ||||| | | ||||||||||||||| ||  | ||| | ||||||| |||| |||||||||| ||||||||||  ||||||||| || |||    
T  5138330 aattacactcccctcctttcttatgttaaaatatatacccc-ctcccttcttattcaaaatatattagaaaatatttcactcccctcccttgagagaaac 5138428  T
Q  208 ttgaattacattc 220  Q
    |||||||||||||    
T  5138429 ttgaattacattc 5138441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 6048012 - 6048095
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    |||||||||||||||||||  || |||||||||||||||||||   ||| ||||||||| ||| |||||| |||| ||||||||    
T  6048012 tttgaattacacttccctcccctcttatgttaaaatatacactctcctcccctcttattcaaaccatatttgaaaatatttcac 6048095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 4054781 - 4054891
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattt 231  Q
    ||||||||||||||||| ||| | ||||||| |||||||||||||||  |||||||||  ||||| | | || | |||||||||||||| || ||  | |    
T  4054781 gttaaaatatacacttccctcccatcttattcaaaacatattagaaaaaatttcactcccctcccctaagagaagcttgaattacattcccctcccctct 4054880  T
Q  232 tatgttaaaat 242  Q
    |||||||||||    
T  4054881 tatgttaaaat 4054891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 5345179 - 5345109
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatatta 174  Q
    ||||||||||||| | ||||||| ||||||||||||||| | ||  ||||||||||||| |||||||||||    
T  5345179 tttgaattacactcctctcatctcttatgttaaaatatataatttcctctcctcttattcaaaacatatta 5345109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 12586297 - 12586183
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||| ||  ||  |||||| |||||||||||||||||| ||||| ||||  ||||||||  || |  ||||||||||||| || ||     
T  12586297 ttatgttaaaatatacattttccttccctcttttttaaaacatattagaaaatatttgactcccctcccttgtgagaagtttgaattacattcccctccc 12586198  T
Q  228 attttatgttaaaat 242  Q
     ||||||||||||||    
T  12586197 cttttatgttaaaat 12586183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 31850683 - 31850570
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||| ||| ||| |||||| || ||||||||||||||| ||||||||||  |||| |||| || |  |||||||||||| ||| ||     
T  31850683 ttatgttaaaatatacatttcactcccctctt-ttcaaaacatattagaaaatatttcactcccctcctttgagagaagtttgaattacattttcctccc 31850585  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  31850584 ttcttatgttaaaat 31850570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 40027520 - 40027462
Alignment:
Q  131 tgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||||||||| ||| ||||||||| |||| |||||||||| ||||||||||    
T  40027520 tgttaaaatatacacttccctcccctcttattcaaaatatattagaaaatatttcactc 40027462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 4877421 - 4877348
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||  ||||  || ||||||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  4877421 ttgaattacactctcctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaa 4877348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 36742625 - 36742544
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| |||||||| ||||||  |||||||||    
T  36742625 aattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatagtagaaaaaatttcactc 36742544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 37658121 - 37658048
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  37658121 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaa 37658048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 1199791 - 1199707
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| ||||   || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||    
T  1199791 ttgaattacactccccttccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactc 1199707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 14594766 - 14594679
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattac 216  Q
    ||||||||||||||||| ||| |||  |||| ||| ||||||||||||||| ||||||||||  ||||||||| || | ||||||||||    
T  14594766 ttatgttaaaatatacatttcactcctctctcattcaaaacatattagaaaatatttcactc-cctcccttgagagaatcttgaattac 14594679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 20691844 - 20691729
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||| ||| ||| ||| ||| ||||||||||||||| | ||| ||| ||||| |||||||||||||||  ||||| |||  ||||| | | ||     
T  20691844 ttgaattacaattcactcctctcttaagttaaaatatacactcccctcccctattattcaaaacatattagaaaaaatttccctcccctcccctaagaga 20691745  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  20691744 agcttgaattacattc 20691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 3933353 - 3933407
Alignment:
Q  124 tcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||| |||||||||||||||||||| ||| ||||| |||| ||||||||||    
T  3933353 tcttttattttaaaatatacacttctctccccttttattcaaaatatattagaaa 3933407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 8438411 - 8438357
Alignment:
Q  146 ttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttga 200  Q
    ||||||||||||||||| ||||||||||| ||| ||||||| |||||||| ||||    
T  8438411 ttctctctcctcttattcaaaacatattaaaaaatatttcattcatctcctttga 8438357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 20183388 - 20183466
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatt 183  Q
    |||||||||||| |||||   | ||||||||||||||||||| | ||  ||||||||| ||||||||||||||| ||||    
T  20183388 ttgaattacactcccctcccttcttatgttaaaatatacactccccttccctcttattcaaaacatattagaaaatatt 20183466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 3079960 - 3079888
Alignment:
Q  151 tctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcc 223  Q
    |||||||||||| ||||||||||| |||  |||||| |||||||| || | || ||||||||||| |||||||    
T  3079960 tctcctcttattcaaaacatattaaaaaacatttcattcatctcctttaagagaaacttgaattatattctcc 3079888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 8007112 - 8007204
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    |||||||||||||||||||  ||||  |||||||| |||| |||||| ||| ||||||||||  ||||| | | || | ||||||||||||||    
T  8007112 ttatgttaaaatatacactcttctcctctcttattcaaaatatattataaaatatttcactctcctcccctaagagaagcttgaattacattc 8007204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 20570156 - 20570212
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttat 161  Q
    |||||||||||| ||||| ||| ||||||||||||||||||| | ||| ||||||||    
T  20570156 ttgaattacactcccctcctctcttatgttaaaatatacactcccctcccctcttat 20570212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 17967870 - 17967961
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    |||||||||||||||||||||  || ||||||||| ||||||||| |||||   ||||||||  ||||| | | || | |||||||||||||    
T  17967870 ttatgttaaaatatacacttccatcccctcttattcaaaacatatcagaaaacttttcactcccctcccataagagaagcttgaattacatt 17967961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 6734204 - 6734086
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||| ||||  ||| ||||||| |||||||||||||||  ||||   ||||||| |||| |||||| |||  ||||||||    |||||| ||||    
T  6734204 tttgaattatacttatctcttcttttaggttaaaatatacactaatctccattcttattcaaaaaatattaaaaaacatttcacttccatcccttaaaag 6734105  T
Q  204 caacttgaattacattctc 222  Q
     || |||||||||||||||    
T  6734104 aaatttgaattacattctc 6734086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 27301911 - 27301961
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||| |||||||||| ||||||||| | ||||||| |||||||||||||||    
T  27301911 ttatattaaaatatatacttctctcacatcttattcaaaacatattagaaa 27301961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 13686645 - 13686573
Alignment:
Q  128 ttatgttaaaatatacacttctc-tctcctcttatttaaaacatattagaaagtatttcactcatctcccttga 200  Q
    |||||||||||||||| | |||| || ||||||||| |||| |||||||||| ||||||||||  |||||||||    
T  13686645 ttatgttaaaatatac-cctctcatcccctcttattcaaaatatattagaaaatatttcactcccctcccttga 13686573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 20540348 - 20540441
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacat 218  Q
    |||||| |||||||||||||||   ||| ||| ||||| |||||||||||||||  |||||||||  ||||| | | || | ||||||||||||    
T  20540348 cttttaagttaaaatatacactctcctccccttttattcaaaacatattagaaaaaatttcactcccctcccctaagagaagcttgaattacat 20540441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 721350 - 721487
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || |||| |||||||||||||||| ||  ||||||||| ||||||||||||||| ||||||||||  ||||||||||||     
T  721350 ttgaattacactcccctcccctcttatattaaaatatacacttcccttccctcttattcaaaacatattagaaaatatttcactctcctcccttgaaaga 721449  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| ||  | |||||||||||||||    
T  721450 agcttgaattacattccccttccattttatgttaaaat 721487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 755573 - 755436
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||| ||| |||||  || |||| |||||||||||||||| ||  ||||||||| ||||||||||||||| ||||||||||  ||||||||||||     
T  755573 ttgaattatactcccctcccctcttatattaaaatatacacttcccttccctcttattcaaaacatattagaaaatatttcactctcctcccttgaaaga 755474  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    |||||||||||||||| ||  | |||||||||||||||    
T  755473 aacttgaattacattccccttccattttatgttaaaat 755436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 17201991 - 17201854
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||||| |||  || |||||||||||| |||||||| ||| | ||||||| |||| |||||||||| ||||||||||  ||||||||| ||     
T  17201991 ttgaattacacttctctccactcttatgttaaaatctacacttccctcccatcttattcaaaatatattagaaaatatttcactcccctcccttgagaga 17201892  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | ||||||||||||||||| ||  | ||||||||||||    
T  17201891 agcttgaattacattctcctcccctcttatgttaaaat 17201854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 37423811 - 37423926
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||| |||||  || ||||||||||||||||||| | | | ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | |    
T  37423811 aattacactcccctcccctcttatgttaaaatatacactccccacccctcttattcaaaacatattagaaaatatttcactcccctcccttgagagaagc 37423910  T
Q  208 ttgaattacattctcc 223  Q
    ||||||||||||||||    
T  37423911 ttgaattacattctcc 37423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 13482847 - 13482709
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||||| ||| ||||||| |||||||||||||  || ||||||||| ||||||||||||||| ||||||| ||  ||| ||||| ||    
T  13482847 tttgaattacactcccctcctctcttatgtttaaatatacacttccttcccctcttattcaaaacatattagaaaatatttcaatcccctcgcttgagag 13482748  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | |||||||||||||| || ||  | ||||||||||||    
T  13482747 aagcttgaattacattcccctcccctcttatgttaaaat 13482709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 4950619 - 4950527
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | ||||||||||||||    
T  4950619 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagagaagcttgaattacattc 4950527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 26705716 - 26705632
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| ||||| ||| ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||    
T  26705716 ttgaattacactcccctcctctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactc 26705632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 30192536 - 30192652
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||  ||||  || ||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||| ||  ||||| ||| ||    
T  30192536 tttgaattacactctcctcccctcttatgttaaaatatacacttccctcccctcttattcaaaacatattagaaaatatttcattcccctcccctgagag 30192635  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  30192636 aagcttgaattacattc 30192652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 54092231 - 54092339
Alignment:
Q  134 taaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctatttta 233  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||| ||  ||||||||| || | ||||||||||||||||| ||  ||| |    
T  54092231 taaaatatacacttccctcccctcttattcaaaacatattagaaaatatttcattcccctcccttgagagaagcttgaattacattctcctcccctttca 54092330  T
Q  234 tgttaaaat 242  Q
    |||||||||    
T  54092331 tgttaaaat 54092339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 7796974 - 7797089
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  ||  |||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| || |   ||||||||| ||     
T  7796974 ttgaattacactcccctcccctcctatgttaaaatatacacttccctctcctcttattcaaaacatattagaaaatattacatttccctcccttgagaga 7797073  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  7797074 agcttgaattacattc 7797089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 35667803 - 35667688
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||| | | | ||||||||| ||||||||||||||| ||||||| ||  ||||||||| ||     
T  35667803 ttgaattacactcccctcccctcttatgttaaaatatacactccccccccctcttattcaaaacatattagaaaatatttcattcccctcccttgagaga 35667704  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  35667703 agcttgaattacattc 35667688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 37735503 - 37735389
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||   |||||||| || |  | |||||||||||||| | |    
T  37735503 ttatattaaaatatacacttctctcttctcttattcaaaacatattagaaaatatttcactcccttcccttgagagaagttagaattacattctcctcat 37735404  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  37735403 ctcttatgttaaaat 37735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 33032188 - 33032305
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||||| |||  || ||||||||||||||||||| ||||| ||| ||||| ||||||||||||||| | ||||||||   |||||| | ||     
T  33032188 ttgaattacacttctctcccctattatgttaaaatatacactcctctccccttttattcaaaacatattagaaaatttttcactcccatcccttaagaga 33032287  T
Q  205 aacttgaattacattctc 222  Q
    | ||||||||||||||||    
T  33032288 agcttgaattacattctc 33032305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 28464229 - 28464313
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||||||||  || |||||||||||||||||||||  || ||| ||||| ||||||||||||||| ||||||||||    
T  28464229 ttgaattacacttccctcccctcttatgttaaaatatacacttccatccccttttattcaaaacatattagaaaatatttcactc 28464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 50824656 - 50824771
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctc-tctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||| | ||  ||| ||||||||||||||||||| ||| || ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||    
T  50824656 ttgaattacactccacttctctcttatgttaaaatatacact-ctcatcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagag 50824754  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  50824755 aagcttgaattacattc 50824771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 26809094 - 26808976
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||| ||| ||||||||| ||||||||||||||| | ||||||||   |||| ||| ||    
T  26809094 tttgaattacactcccctcacatctcatgttaaaatatacacttccctcccctcttattcaaaacatattagaaa-tttttcactcccatcccctgatag 26808996  T
Q  204 caacttgaattacattctcc 223  Q
     | |||||||||||||||||    
T  26808995 aagcttgaattacattctcc 26808976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 219
Target Start/End: Complemental strand, 7166125 - 7166011
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| | ||| ||||||||| ||||||||| |||||  |||||||||  ||||| | | ||     
T  7166125 ttgaattacacttccctcctctcttaagttaaaatatacactcccctcccctcttattcaaaacatatcagaaaaaatttcactcccctcccctaagaga 7166026  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  7166025 agcttgaattacatt 7166011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 55814367 - 55814461
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctc 222  Q
    ||||||| ||||||||| ||| ||| ||||||||| ||||||| ||||||| ||||||||||  ||||||||| || | ||||||||||||||||    
T  55814367 ttatgtttaaatatacatttccctcccctcttattcaaaacatcttagaaaatatttcactctcctcccttgagagaagcttgaattacattctc 55814461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 16960233 - 16960306
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||  || ||||||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  16960233 ttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaa 16960306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 35854250 - 35854161
Alignment:
Q  131 tgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||| |||||||||| || |||||||||| |||||||||||||||  |||||||||  ||||||||| || | ||||||||||||||    
T  35854250 tgttaaactatacacttccctttcctcttattcaaaacatattagaaaacatttcactcccctcccttgagagaagcttgaattacattc 35854161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 29979736 - 29979672
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||||  |||||||||    
T  29979736 cttttatgttaaattagacactcctctctcctcttatttaaaacatattagaaaacatttcactc 29979672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 13771746 - 13771861
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||| | ||  || ||||||||||||||||||| | |||  |||||||| ||||||||||||||| ||||||||||  || |||||| ||     
T  13771746 ttgaattacactttcatcccctcttatgttaaaatatacactcccctcctctcttattcaaaacatattagaaaatatttcactccccttccttgagaga 13771845  T
Q  205 aacttgaattacattc 220  Q
    |  |||||||||||||    
T  13771846 agattgaattacattc 13771861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 35667330 - 35667235
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttga 200  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| |||| || ||  |||||||||    
T  35667330 ttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatattccattcccctcccttga 35667235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 44665232 - 44665141
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctccc 196  Q
    ||||||||| || |||||  |||||||||||||||||||||| | ||| ||||||||| |||| ||||||||||  ||||||||| ||||||    
T  44665232 ttgaattacgctcccctccccttttatgttaaaatatacactcccctcccctcttattcaaaatatattagaaaaaatttcactcctctccc 44665141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 219
Target Start/End: Complemental strand, 4649746 - 4649633
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||||| |||| |||||||| |||| |||||| ||| |||||||||   |||| |||| ||     
T  4649746 ttgaattacactcccctcg-ctcttatgttaaaatatacacttcactcttctcttattcaaaatatattaaaaaatatttcacttcgctcctttgagaga 4649648  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  4649647 agcttgaattacatt 4649633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 8139015 - 8138921
Alignment:
Q  129 tatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcc 223  Q
    |||||||||||||||||| | ||| ||||||||| |||||||||| | || ||||||||||  ||||||| | || | |||||||||||||||||    
T  8139015 tatgttaaaatatacactcccctcccctcttattcaaaacatattgggaaatatttcactcccctcccttaatagaagcttgaattacattctcc 8138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 13395217 - 13395299
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    |||||||||||| |||||  || ||| ||||||||||||||||| ||| ||||||||| |||||||||||||||  |||||||    
T  13395217 ttgaattacactcccctcccctcttaagttaaaatatacacttccctcccctcttattcaaaacatattagaaaaaatttcac 13395299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 18362111 - 18362225
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||| ||| ||| ||||| | ||  ||||||||| || | ||||| ||||||||||| ||     
T  18362111 ttatgttaaaatatacatttctctcccctcttattcaaaacattttaaaaaatattttagtcccctcccttgagagaagcttgagttacattctcctccc 18362210  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  18362211 ctcttatgttaaaat 18362225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 36600816 - 36600702
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||| ||| ||| ||||| | ||  ||||||||| || | ||||| ||||||||||| ||     
T  36600816 ttatgttaaaatatacatttctctcccctcttattcaaaacattttaaaaaatattttagtcccctcccttgagagaagcttgagttacattctcctccc 36600717  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  36600716 ctcttatgttaaaat 36600702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 45847162 - 45847236
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||||||||||  || ||||||||||||||||| | | ||| ||||||||| |||||||||||||||    
T  45847162 tttgaattacacttccctcccctcttatgttaaaatatacaatcccctcccctcttattcaaaacatattagaaa 45847236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 6233150 - 6233037
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  6233150 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 6233051  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  6233050 agcttgaattacat 6233037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 8193037 - 8192924
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  8193037 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 8192938  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  8192937 agcttgaattacat 8192924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 10155530 - 10155615
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||||  ||||   ||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||  |||||||||    
T  10155530 tttgaattacactctcctccctttttaagttaaaatatacacttccctcccctcttattcaaaacatattagaaaaaatttcactc 10155615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 19314060 - 19313987
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||   | ||||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  19314060 ttgaattacactcccctcccgtcttatgttaaaatatacactcctctcccctcttattcaaaacatattagaaa 19313987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 23308826 - 23308939
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||||  ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  23308826 ttgaattacactcccctcccctcttaagttaaaatatacactttcctcccctcttattcaaaacatattagaaataatttcactcccctcccctaagaga 23308925  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  23308926 agcttgaattacat 23308939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 33047277 - 33047192
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||| |||||  || ||||||||||||||||||| |  || ||||||||| |||||||||||||||  |||||||||    
T  33047277 tttgaattacactcccctcccctcttatgttaaaatatacactcccttcccctcttattcaaaacatattagaaaaaatttcactc 33047192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 49621371 - 49621310
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||| |||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||    
T  49621371 ttattttaaaatatacacttccctcccctcttattcaaaacatattagaaaatatttcactc 49621310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 17722778 - 17722862
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| |||||||||||| ||  |||||||||    
T  17722778 ttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattaggaaaaatttcactc 17722862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 17729538 - 17729654
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||||| |||  || ||||||||||||||||| | | ||| ||||||||| |||||||||||||||   ||||||||  ||||| | | ||    
T  17729538 tttgaattacacttctctctcctcttatgttaaaatatacattcccctcgcctcttattcaaaacatattagaaaacttttcactcccctcccctaagag 17729637  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  17729638 aagcttgaattacattc 17729654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 19854831 - 19854767
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||| ||||  |||||||||    
T  19854831 cttttatgttaaaatatacatttctctcccctcttattcaaaacatatttgaaaacatttcactc 19854767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 46490071 - 46490155
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcact 188  Q
    ||||||||||||| | || | ||  |||||||||||||||||||| ||||||||||||  |||| |||||||||| |||||||||    
T  46490071 tttgaattacactcctctaacctcctatgttaaaatatacacttcactctcctcttatgcaaaatatattagaaaatatttcact 46490155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 36651317 - 36651203
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||||| | |||||||||||| |||||||||  ||| | ||||||| |||||||||||| || | ||||||||  ||||| | | ||    
T  36651317 tttgaattacactcccctccttttttatgttaaagtatacactttcctcccttcttattcaaaacatattag-aattttttcactcccctcccctaagag 36651219  T
Q  204 caacttgaattacatt 219  Q
     |||||||||||||||    
T  36651218 aaacttgaattacatt 36651203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 37423171 - 37423286
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||   | |||||||||||||| || ||  ||| ||||||||| ||||||||||||||| ||||||||||  ||| | ||| ||     
T  37423171 ttgaattacactcccctccattcttatgttaaaatatgcagtttcctcccctcttattcaaaacatattagaaaatatttcactcccctctcctgagaga 37423270  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  37423271 agcttgaattacattc 37423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 6711877 - 6711799
Alignment:
Q  164 aaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattttatgttaaaat 242  Q
    ||||||||||||||| ||||||| ||  ||||||||| || | ||||||||||||||||| ||| ||||| ||||||||    
T  6711877 aaaacatattagaaaatatttcattcccctcccttgagagaagcttgaattacattctcctcctcttttaagttaaaat 6711799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 796411 - 796524
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||| ||||||||||  |||||||||  ||||| | | ||     
T  796411 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaagatattagaaaaaatttcactcccctcccctaagaga 796510  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  796511 agcttgaattacat 796524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 22474891 - 22474950
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcat 191  Q
    ||||||||||||||||  ||||||||||||  ||||||||||| ||| ||||||||||||    
T  22474891 gttaaaatatacactttcctctcctcttatgcaaaacatattaaaaaatatttcactcat 22474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 37708803 - 37708918
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| | |||  || ||||||||||||||||||| | ||| ||||||||| |||||||| ||||||   ||||||||  ||||| | | ||     
T  37708803 ttgaattacactcctctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacataatagaaaacttttcactcccctcccctaagaga 37708902  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  37708903 agcttgaattacattc 37708918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 46076998 - 46076903
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcc 223  Q
    |||||||||||||||||  ||  |  ||||| ||| ||||||| ||||||| |||||||||| |||||||||| || | | |||||||||||||||    
T  46076998 ttatgttaaaatatacatctccttaccctctcattcaaaacatgttagaaaatatttcactcctctcccttgagagaagcatgaattacattctcc 46076903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 46095434 - 46095549
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  ||||||| |  ||||| | | ||     
T  46095434 ttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcacccccctcccctaagaga 46095533  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  46095534 agcttgaattacattc 46095549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 47030529 - 47030447
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    ||||||||||||  ||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||    
T  47030529 ttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcac 47030447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 55069538 - 55069488
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||| ||| ||| ||||||||| |||||||||||||||    
T  55069538 ttatgttaaaatatacaattccctcccctcttattcaaaacatattagaaa 55069488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 35667613 - 35667544
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatatta 174  Q
    ||||||||||||| ||||  || ||||||||||||||||||| | ||| || |||||| |||||||||||    
T  35667613 ttgaattacactttcctcccctcttatgttaaaatatacactcccctccccacttattcaaaacatatta 35667544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 36897506 - 36897567
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttca 186  Q
    |||||| ||||||||||||||| | ||| ||||||||| |||| |||||||||| |||||||    
T  36897506 cttttaagttaaaatatacactcccctcccctcttattcaaaatatattagaaaatatttca 36897567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 47931254 - 47931193
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||||||||| ||| |  |||||||| |||| |||||||||| ||||||||||    
T  47931254 ttatgttaaaatatacactcctcacctctcttattcaaaatatattagaaaatatttcactc 47931193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 49702404 - 49702477
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||||| |||  || |||| |||||||||||| |  |||| ||||||||| |||||||||||||||    
T  49702404 ttgaattacacttctctcccctcttatattaaaatatacaatcttctcccctcttattcaaaacatattagaaa 49702477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 9784637 - 9784729
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    |||||||||||||||||||   |||  |||||||| ||||||||||||||| | |||||||||  |||| | | || | ||||||||||||||    
T  9784637 ttatgttaaaatatacactctcctcctctcttattcaaaacatattagaaaatttttcactcacatcccctaagagaatcttgaattacattc 9784729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 23721407 - 23721522
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||  |||||  |||||||||||||||||||| ||  ||| || |||||| |||||||||||||||   ||||||||  ||||| | | ||    
T  23721407 tttgaattacacc-ccctccccttttatgttaaaatatacattttcctccccacttattcaaaacatattagaaaacttttcactctcctcccctaagag 23721505  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  23721506 aagcttgaattacattc 23721522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 32448325 - 32448375
Alignment:
Q  128 ttatgttaaaatatacacttct-ctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  32448325 ttatgttaaaatataca-ttctcctcccctcttatttaaaacatattagaaa 32448375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 35667428 - 35667385
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttc 148  Q
    ||||||||||||||||||  || |||||||||||||||||||||    
T  35667428 ttgaattacacttccctcccctcttatgttaaaatatacacttc 35667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 616178 - 616109
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctc-tctcctcttatttaaaacatatta 174  Q
    |||||||||||| ||||| ||| ||| |||||||||||||| |||| || ||||||||| |||||||||||    
T  616178 ttgaattacactcccctcctctcttaagttaaaatatacac-tctcatcccctcttattcaaaacatatta 616109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 4949961 - 4950003
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||    
T  4949961 tttgaattacactcccctcctctcttatgttaaaatatacact 4950003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 12251372 - 12251326
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||| ||  ||||||||| |||||||||||||||    
T  12251372 gttaaaatatacacttcccttccctcttattcaaaacatattagaaa 12251326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 21037326 - 21037368
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacactt 147  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||    
T  21037326 ttgaattacactcccctcctctcttatgttaaaatatacactt 21037368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 42074454 - 42074404
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||| ||| ||| | ||||||||| |||||||||||||||    
T  42074454 ttatgttaaaatatatactcctcccccctcttattcaaaacatattagaaa 42074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 16192362 - 16192321
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    |||||||||||| ||||| ||| |||||||||||||||||||    
T  16192362 ttgaattacactcccctcctctcttatgttaaaatatacact 16192321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 36898146 - 36898105
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  36898146 ttgaattacactcccctctccttttatgttaaaatatacact 36898105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 56310113 - 56310041
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||  |||| ||| ||||||||||||||||||  | ||| ||||||||| |||||||||| ||||    
T  56310113 ttgaattacactctcctcctctcttatgttaaaatatacac-cccctcccctcttattcaaaacatatttgaaa 56310041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 35853586 - 35853626
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacac 145  Q
    ||||||||||||||||||  || ||||||||||||||||||    
T  35853586 ttgaattacacttccctcccctcttatgttaaaatatacac 35853626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 46010502 - 46010594
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| || | ||| ||||||||||    
T  46010502 ttatgttaaaatatacactcctctctcctcttatttaaaacatattagaaaatatttcactcctctcccttgagagaagcttaaattacattc 46010594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 11641023 - 11640912
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||| |||||  |||||||||||| |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||  |||||||||||| | |    
T  11641023 aattacactcccctccccttttatgttaatatatacacttttctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgaaagaagc 11640924  T
Q  208 ttgaattacatt 219  Q
    ||||||||||||    
T  11640923 ttgaattacatt 11640912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 43450127 - 43450264
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctctt--atttaaaacatattagaaagtatttcactcatctcccttgaaa 202  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||  ||| |||||||||| |||| |||||||||| |||||||||| |    
T  43450127 ttgaattacacttccctcatctcttatgttaaaatataca-ttctc-ctcctcttttattcaaaacatattggaaaatatttcactcctctcccttgaga 43450224  T
Q  203 gcaacttgaattacattctccacctattttatgttaaaat 242  Q
    | | |||||||||||||| || ||  | ||||||||||||    
T  43450225 gaagcttgaattacattcccctcccctcttatgttaaaat 43450264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 48982585 - 48982470
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||| ||||| ||     
T  48982585 ttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctctcttgagaga 48982486  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  48982485 agcttgaattacattc 48982470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 19156099 - 19156007
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||| ||| ||||||||||||||||||||| || | |||||||| |||||    
T  19156099 ttatgttaaaatatacacttccctcccctcttattgaaaacatattaaaaaatatttcactcatctcccttgatagaagcttgaattgcattc 19156007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 20755498 - 20755406
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||| ||| ||||||||||||||||||||| || | |||||||| |||||    
T  20755498 ttatgttaaaatatacacttccctcccctcttattgaaaacatattaaaaaatatttcactcatctcccttgatagaagcttgaattgcattc 20755406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 8122655 - 8122770
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||||| |||||   ||  ||||||||| ||     
T  8122655 ttgaattacactccccttatctcttatgttaaaatatacacttccctcccctcttattcaaaacatattagaaaatatttttatcccctcccttgagaga 8122754  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  8122755 agcttgaattacattc 8122770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 42813625 - 42813510
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||  ||| ||||||||| |||||||||||||||  ||||| |||  ||||||||| ||     
T  42813625 ttgaattacactcccctcctctcttatgttaaaatatacactttcctcccctcttattcaaaacatattagaaaacatttccctcccctcccttgagaga 42813526  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  42813525 agcttgaattacattc 42813510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 20261034 - 20261147
Alignment:
Q  107 gaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaa 206  Q
    ||||||||||||||||  || ||||||||||||||||||||| ||| ||||||||| ||||||| ||| ||| ||||||||||  || |||||| || |     
T  20261034 gaattacacttccctcccctcttatgttaaaatatacacttccctcccctcttattcaaaacattttaaaaaatatttcactccccttccttgagagaag 20261133  T
Q  207 cttgaattacattc 220  Q
    ||||||||||||||    
T  20261134 cttgaattacattc 20261147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 16425364 - 16425483
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| | |||  || ||||||||||||||||||||| |||   ||||||| |||||||| |||||| |||||||||| | |||||||| ||    
T  16425364 tttgaattacactcctctcccctcttatgttaaaatatacacttccctccattcttattcaaaacatactagaaaatatttcactcctatcccttgagag 16425463  T
Q  204 caacttgaattacattctcc 223  Q
     | |||||||||||||||||    
T  16425464 aagcttgaattacattctcc 16425483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 22712350 - 22712235
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| ||||  | | ||||||||||||||||||| | ||| | ||||||| ||||||||||||||| ||||||||||  ||||||||||||     
T  22712350 ttgaattacactccccttttttattatgttaaaatatacactaccctcccttcttattcaaaacatattagaaaatatttcactccactcccttgaaaga 22712251  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||| ||||    
T  22712250 agcttgaattatattc 22712235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 38790788 - 38790673
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| |||||  || |||| ||||||||||||| || ||| ||||||||| ||||||||||||||| ||||| ||||  ||||||||| ||    
T  38790788 tttgaattacactcccctctcctcttatattaaaatatacacgtccctcccctcttattcaaaacatattagaaaatatttaactcccctcccttgagag 38790689  T
Q  204 caacttgaattacatt 219  Q
     | |||||||||||||    
T  38790688 aagcttgaattacatt 38790673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 22263814 - 22263928
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||||||| ||| ||||||||| |||| |||||||||| ||||||||||  |||||||||  | | |||||||||||||| || ||     
T  22263814 ttatgttaaaatatacacttccctcccctcttattcaaaatatattagaaaatatttcactcccctcccttgagggaagcttgaattacattcccctccc 22263913  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  22263914 ctcttatgttaaaat 22263928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 19332424 - 19332515
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    ||||||||||||||||||||  ||| | ||||||| ||||||||||||||| |||||||||   |||||||||||| | |||||||||||||    
T  19332424 ttatgttaaaatatacactttcctcccatcttattcaaaacatattagaaaatatttcacttccctcccttgaaagaagcttgaattacatt 19332515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 8535481 - 8535399
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttca 186  Q
    ||||||||||||| |||||  |||||||||||||||||| ||| | ||| ||||||||| ||||||||||||||| |||||||    
T  8535481 tttgaattacactcccctccccttttatgttaaaatatatactccactcccctcttattcaaaacatattagaaaatatttca 8535399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 36687324 - 36687418
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttg 199  Q
    ||||||||||||||||||  || ||||||||||||||||||| | | | | ||||||| ||||||||||||||| ||||||||||  ||||||||    
T  36687324 ttgaattacacttccctcccctcttatgttaaaatatacactccccccccgtcttattcaaaacatattagaaaatatttcactctcctcccttg 36687418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 38988438 - 38988328
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattt 231  Q
    ||||||||||| |||||| || ||||||||| |||| |||||||||| |||||||||   ||||||||| || ||||| ||||||||| ||| ||  |||    
T  38988438 gttaaaatatatacttctttcccctcttattcaaaatatattagaaaatatttcacttccctcccttgagagaaacttcaattacattttcctccccttt 38988339  T
Q  232 tatgttaaaat 242  Q
    |||||||||||    
T  38988338 tatgttaaaat 38988328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 40400953 - 40401067
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | ||||||||  ||||||||| |  | |||||||||| ||| || ||     
T  40400953 ttatgttaaaatatacactcctctcccctcttattcaaaacatattagaaattttttcactcccctcccttgacaaaagcttgaattacgttcccctccc 40401052  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  40401053 ctcttatgttaaaat 40401067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 5228685 - 5228548
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||  |||||||||||||||||||||| | ||| ||||||||| ||||||||||||||    ||||||||   |||||| | ||     
T  5228685 ttgaattacactctcctccccttttatgttaaaatatacactcccctcccctcttattcaaaacatattagaatacttttcactcccttcccttaagaga 5228586  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | ||||||||||||||||| ||  | ||||||||||||    
T  5228585 agcttgaattacattctcctcccttcttatgttaaaat 5228548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 222
Target Start/End: Complemental strand, 32388194 - 32388077
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| | |||  || ||||||||||||||||||||| ||| | |||| || ||||||||||||||| ||||||||||  ||||| ||| ||     
T  32388194 ttgaattacactccactcccctcttatgttaaaatatacacttccctcccatctttttcaaaacatattagaaaatatttcactctcctcccctgagaga 32388095  T
Q  205 aacttgaattacattctc 222  Q
    |  |||||||||||||||    
T  32388094 agtttgaattacattctc 32388077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 35783390 - 35783527
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||||||| |  || ||||||||  |||| ||| |||||| ||||||||||  |  || ||||||     
T  35783390 ttgaattacacttccctctcctcttatgttaaaatatacactccattcccctcttatgcaaaatataatagaaaatatttcactccacatccctgaaaga 35783489  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||||||| |  | ||||||||||||    
T  35783490 agcttgaattacattctccatccctcttatgttaaaat 35783527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 13904456 - 13904364
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    |||||||||||||||||||||  || ||| ||||| ||||||||||||||| ||||||||||  |||| |||| || | ||||||||||||||    
T  13904456 ttatgttaaaatatacacttccatccccttttattcaaaacatattagaaaatatttcactctcctccgttgagagaagcttgaattacattc 13904364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 317306 - 317420
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  317306 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 317405  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  317406 agcttgaattacatt 317420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 40402221 - 40402135
Alignment:
Q  134 taaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||| ||||| || | ||||||||||||||    
T  40402221 taaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctctcttgagagaagcttgaattacattc 40402135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 25284 - 25397
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  25284 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 25383  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  25384 agcttgaattacat 25397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 2146064 - 2146201
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| |||||||||||||||   ||||||||||||| ||| |||||||||||  |||||||||  ||||| | | ||     
T  2146064 ttgaattacactcccctcccctcttaagttaaaatatacactctcctctcctcttattcaaatcatattagaaaaaatttcactcccctcccctaagaga 2146163  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||  | ||||||||||||    
T  2146164 agcttgaattacattcccctcccctcttatgttaaaat 2146201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 2935807 - 2935734
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| || ||  || ||||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  2935807 ttgaattacactcccttcccctcttatgttaaaatatacacttctctcccctcttattcaaaacatatgagaaa 2935734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 19435343 - 19435258
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||| | |||  || |||||||| ||||||||||| |||| ||||||||| |||||| |||||||| ||||||||||    
T  19435343 tttgaattacactcctctccactcttatgttataatatacacttttctcccctcttattcaaaacaaattagaaaatatttcactc 19435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 36847883 - 36847975
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| |||| || || ||| | |||| || | ||||||||||||||    
T  36847883 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatattccattcctctgctttgagagaagcttgaattacattc 36847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 242
Target Start/End: Complemental strand, 7192235 - 7192128
Alignment:
Q  135 aaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattttat 234  Q
    |||||||||||||| ||| ||||||||   |||| ||||||||| || |||||||  | ||| |||||| | ||||||||||||||||||||  | ||||    
T  7192235 aaaatatacacttccctcccctcttatgcgaaacgtattagaaaataattcactccacacccctgaaagaagcttgaattacattctccacccctcttat 7192136  T
Q  235 gttaaaat 242  Q
    ||||||||    
T  7192135 gttaaaat 7192128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 19156004 - 19155934
Alignment:
Q  150 ctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||| ||||||| ||||||| |||||||| |||||||||||| |  | ||||||||||||||    
T  19156004 ctctcctcttattcaaaacatgttagaaaatatttcacccatctcccttgagataagcttgaattacattc 19155934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 20755403 - 20755333
Alignment:
Q  150 ctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||| ||||||| ||||||| |||||||| |||||||||||| |  | ||||||||||||||    
T  20755403 ctctcctcttattcaaaacatgttagaaaatatttcacccatctcccttgagataagcttgaattacattc 20755333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 23742705 - 23742623
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    ||||||||||||   ||||||| ||||||||||||||||| |  |||| ||||||||| ||||||||||||||| | ||||||    
T  23742705 ttgaattacactcatctcatctcttatgttaaaatatacaatcatctcccctcttattcaaaacatattagaaaatttttcac 23742623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 25607659 - 25607585
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  25607659 tttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaa 25607585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 34999213 - 34999325
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| || |||||||| ||| | ||||||||  ||||||| | ||     
T  34999213 ttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaacacatattaaaaactttttcactc-cctcccttaagaga 34999311  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  34999312 agcttgaattacat 34999325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 5951678 - 5951791
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||| |||| ||||  ||| |||||||||||||||  ||||| |||  ||||| | | ||    
T  5951678 tttgaatttcactaccctcctctcttatgttaaaatatacacttttctcccctc--attcaaaacatattagaaaacatttctctcccctcccctaagag 5951775  T
Q  204 caacttgaattacatt 219  Q
     | |||||||||||||    
T  5951776 aagcttgaattacatt 5951791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 28308025 - 28308105
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttc 185  Q
    |||||||||||| |||||  || ||||||||||||||| |||| |||| |||||| || ||||||||||| ||| ||||||    
T  28308025 ttgaattacactcccctctcctcttatgttaaaatatatacttttctcccctctttttcaaaacatattaaaaaatatttc 28308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 38670730 - 38670646
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| |||||| || |||||||||||||||  |||||||||    
T  38670730 ttgaattacactcccctcccctcttaagttaaaatatacactaccctcccctctttttcaaaacatattagaaaaaatttcactc 38670646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 14078407 - 14078457
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  14078407 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaa 14078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 14388435 - 14388485
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  14388435 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaa 14388485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 1573106 - 1573178
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  || ||||||||||||||||| | | ||| ||||||||| |||||||||||||||    
T  1573106 ttgaattacactcccctcccctcttatgttaaaatataca-tcccctcccctcttattcaaaacatattagaaa 1573178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 3340801 - 3340874
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||| ||||||   || |||||||||||||||||||||  || ||||||||| |||| ||||||||||    
T  3340801 ttgaattacatttcccttccctcttatgttaaaatatacacttcattcccctcttattcaaaagatattagaaa 3340874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 26903262 - 26903217
Alignment:
Q  133 ttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||    
T  26903262 ttaaaatatacacttccctcccctcttattcaaaacatattagaaa 26903217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 32867949 - 32867812
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| | |||  || ||||||||||||||||||| | ||| ||||||||| ||||| || | |||  | ||||||||  ||||| | | ||     
T  32867949 ttgaattacactcctctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacttaattgaatatttttcactcccctcccctaagaga 32867850  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||| | ||||||||||||    
T  32867849 agcttgaattacattcccctcctctcttatgttaaaat 32867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 12677766 - 12677706
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcact 188  Q
    ||||||||||||||||| | || || ||||||||| |||||||||||||||  ||||||||    
T  12677766 ttatgttaaaatatacaatgctttcccctcttattcaaaacatattagaaaacatttcact 12677706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 12679661 - 12679601
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcact 188  Q
    ||||||||||||||||| | || || ||||||||| |||||||||||||||  ||||||||    
T  12679661 ttatgttaaaatatacaatgctttcccctcttattcaaaacatattagaaaacatttcact 12679601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 48872721 - 48872644
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtattt 184  Q
    ||||||||||||  |||| || || ||||||||||||||||  | ||| ||||||||| ||||||||||||||| |||||    
T  48872721 ttgaattacact--cctcttccttcatgttaaaatatacacacccctcccctcttattcaaaacatattagaaaatattt 48872644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 29103572 - 29103667
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcc 223  Q
    ||||||||||||||||||||| |||  |||||||| |||| ||||| |||| || |||||||  ||||| | | || | ||||||||| |||||||    
T  29103572 ttatgttaaaatatacacttccctcctctcttattcaaaatatatttgaaaatagttcactcccctcccctaagagaagcttgaattatattctcc 29103667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 39186929 - 39186826
Alignment:
Q  118 ccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaa-agcaacttgaattac 216  Q
    ||||| ||||| ||||| ||| ||||||||  ||| ||||||||| |||||||||||||||  | |||||||| ||||| | || || | ||||||||||    
T  39186929 ccctcctctttcatgttcaaacatacactttcctcccctcttattcaaaacatattagaaaaaaattcactcacctcccctaaagagaagcttgaattac 39186830  T
Q  217 attc 220  Q
    ||||    
T  39186829 attc 39186826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 2790959 - 2790909
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||||| ||| ||||||||| |||| |||| |||||    
T  2790959 ttatgttaaaatatacacttccctcccctcttattcaaaatatatgagaaa 2790909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 11696883 - 11696781
Alignment:
Q  140 atacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattttatgttaa 239  Q
    ||||||| | ||| ||||||||| ||||| ||||||||| ||||||||||  | ||||| | || | ||||||||||||||  ||||  | |||||||||    
T  11696883 atacactcccctcccctcttattcaaaacttattagaaaatatttcactctccccccttaagagaagcttgaattacattcctcacccctcttatgttaa 11696784  T
Q  240 aat 242  Q
    |||    
T  11696783 aat 11696781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 23233488 - 23233422
Alignment:
Q  154 cctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||| |||||||||||||||  ||||||||   ||||||| | || ||||||||||||||||    
T  23233488 cctcttattcaaaacatattagaaaacatttcacttccctcccttaagagaaacttgaattacattc 23233422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 23243149 - 23243083
Alignment:
Q  154 cctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||| |||||||||||||||  ||||||||   ||||||| | || ||||||||||||||||    
T  23243149 cctcttattcaaaacatattagaaaacatttcacttccctcccttaagagaaacttgaattacattc 23243083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 29823357 - 29823431
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||||  ||||  || ||| ||||||||||||||| | ||| ||||||||| |||| ||||||||||    
T  29823357 tttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaatatattagaaa 29823431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 27144212 - 27144277
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatatt 173  Q
    ||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| ||||| ||||    
T  27144212 aattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacttatt 27144277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 31220849 - 31220910
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||| |||||||||||| ||| |||  |||||||| ||||||||||| ||| ||||||||||    
T  31220849 ttatattaaaatatacaattccctcctctcttattcaaaacatattaaaaaatatttcactc 31220910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 34835527 - 34835447
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacact-tctctctcctcttatttaaaacatattagaaagtattt 184  Q
    ||||||||||| | ||||| ||| ||||||||||||||||| | ||| ||| |||| ||| ||||||||||||||| |||||    
T  34835527 tttgaattacattcccctcttctcttatgttaaaatatacaatctctttct-ctctaattcaaaacatattagaaaatattt 34835447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 6184706 - 6184762
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcact 188  Q
    ||||||||||||||| | |||  |||||||| |||||||||||||||  ||||||||    
T  6184706 gttaaaatatacactcccctccactcttattcaaaacatattagaaaaaatttcact 6184762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 40343786 - 40343870
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| ||||   || ||| ||||||||||||||| | ||| ||||||||| |||||  ||||||||  |||||||||    
T  40343786 ttgaattacactccccttccctcttaagttaaaatatacactcccctcccctcttattcaaaactaattagaaaaaatttcactc 40343870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 51362533 - 51362418
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||| ||||  |||||||||||||||||||||| | ||| ||||||||| ||||||||||| ||| ||||||||||| ||||||||| ||     
T  51362533 ttgaattacactttcctccccttttatgttaaaatatacactcccctcccctcttattcaaaacatattaaaaaatatttcactcacctcccttgagaga 51362434  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  51362433 agcttgaattacattc 51362418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 42830564 - 42830702
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||| |  || ||||||||||||||||| ||| ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||    
T  42830564 tttgaattacactccccgcccctcttatgttaaaatatacatttccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagag 42830663  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | |||||||||||||| || ||  ||||||||||||||    
T  42830664 aagcttgaattacattcccctccccttttatgttaaaat 42830702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 43319942 - 43320080
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| |||||  |||||||||||||||||||| | | ||| ||||||| | ||||||||||||||| |||||||||| |||||||||| ||    
T  43319942 tttgaattacactcccctctccttttatgttaaaatatacattcccctcccctcttaatcaaaacatattagaaaatatttcactcctctcccttgagag 43320041  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | |||||||||||||| || || || ||| ||||||||    
T  43320042 aagcttgaattacattcccctcccatcttaagttaaaat 43320080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 16537067 - 16536930
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||||||||  ||| ||||||||| ||||||| ||| ||| ||||||||||  ||||||||| ||     
T  16537067 ttgaattacacttccctcccctcttatgttaaaatatacactttcctcccctcttattcaaaacattttaaaaaatatttcactcccctcccttgagaga 16536968  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||  | ||||||||||||    
T  16536967 agcttgaattacattcccctcccctcttatgttaaaat 16536930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 41576058 - 41575922
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||| | ||||| ||||||||||||||||||||||||| ||| |||||| || ||||||||||||||| ||||||||||  ||||||||| ||     
T  41576058 ttgaattacattcccctcctcttttatgttaaaatatacacttccctcccctctt-ttcaaaacatattagaaaatatttcactcccctcccttgagaga 41575960  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    |  ||||||||||||| || ||  | ||||||||||||    
T  41575959 agattgaattacattcccctcccctcttatgttaaaat 41575922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 27226373 - 27226235
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| |||||  || ||||||||||||||||| ||| ||| |||||| || ||||||||||||||| ||||||||||  ||||||||| ||    
T  27226373 tttgaattacactcccctctcctcttatgttaaaatatacatttccctcccctctttttcaaaacatattagaaaatatttcactcccctcccttgagag 27226274  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | ||||||| |||||| || ||  | ||||||||||||    
T  27226273 aagcttgaatgacattcacctcccctcttatgttaaaat 27226235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 19072406 - 19072268
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||||| ||| |||| |||||||||||||| | ||| ||||||||| |||| |||||||||| ||||||||||  ||||||||| ||    
T  19072406 tttgaattacactcccctcctctcttatattaaaatatacactcccctcccctcttattcaaaatatattagaaaatatttcactcccctcccttgagag 19072307  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | ||| ||||||| || || || || ||| ||||||||    
T  19072306 aagcttaaattacaatcccctcccatcttaagttaaaat 19072268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 19120296 - 19120158
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||||| ||| |||| |||||||||||||| | ||| ||||||||| |||| |||||||||| ||||||||||  ||||||||| ||    
T  19120296 tttgaattacactcccctcctctcttatattaaaatatacactcccctcccctcttattcaaaatatattagaaaatatttcactcccctcccttgagag 19120197  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | ||| ||||||| || || || || ||| ||||||||    
T  19120196 aagcttaaattacaatcccctcccatcttaagttaaaat 19120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 19997654 - 19997768
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||||||||  ||||| | | || | | ||||||||||||||| ||     
T  19997654 ttatgttaaaatatacacttttctcccctcttattcaaaacatattagaaaatatttcactctcctcccctaagagaagcctgaattacattctcctccc 19997753  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  19997754 ctcttatgttaaaat 19997768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 36511453 - 36511566
Alignment:
Q  129 tatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccaccta 228  Q
    |||||||||| ||||||||| ||| |||||| || ||||||||||||||| ||||||||||  ||  ||||| || | ||||||||||||||||| ||      
T  36511453 tatgttaaaacatacacttcactcccctctttttcaaaacatattagaaaatatttcactcccctttcttgagagaagcttgaattacattctcctcccc 36511552  T
Q  229 ttttatgttaaaat 242  Q
    ||||||||||||||    
T  36511553 ttttatgttaaaat 36511566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 125103 - 125003
Alignment:
Q  120 ctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    ||||||| ||||||||||||||||||| |||||  |||||||  ||||||||||||||| |||||||||| || ||  |||||| | |||||||||||||    
T  125103 ctcatctcttatgttaaaatatacactcctctcctctcttatgcaaaacatattagaaaatatttcactcttcacctctgaaagaagcttgaattacatt 125004  T
Q  220 c 220  Q
    |    
T  125003 c 125003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 29510526 - 29510410
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||||   || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||| | | ||    
T  29510526 tttgaattacactccccttccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactctcctcccataatag 29510427  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  29510426 aagcttgaattacattc 29510410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 794771 - 794681
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacat 218  Q
    ||||||||||||||||||| | |||  |||||||| ||||||||||||||| ||||||||||  ||||||||| || | ||||||||||||    
T  794771 ttatgttaaaatatacactcccctcctctcttattcaaaacatattagaaaatatttcactcccctcccttgagagaagcttgaattacat 794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 17110063 - 17109927
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||| ||||  |||||||||||||||||||||||||   ||||||||  ||||||| | ||     
T  17110063 ttgaattacactaccctcccctcttatgttaaaatatacact-ctcttccctcttatttaaaacatattagaaaacttttcactcccctcccttaagaga 17109965  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||| ||||| || ||  | ||||||||||||    
T  17109964 agcttgaattccattcccctcccctcttatgttaaaat 17109927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 23739863 - 23739750
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || |||||||||||||||||||   ||| ||||||||| ||||||||||||||| | |||||||   ||||||||| ||     
T  23739863 ttgaattacacttccctcccctcttatgttaaaatatacactctcctcccctcttattcaaaacatattagaaaatctttcacttccctcccttgagaga 23739764  T
Q  205 aacttgaattacat 218  Q
    | ||| ||||||||    
T  23739763 agcttaaattacat 23739750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 242
Target Start/End: Complemental strand, 38011900 - 38011763
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  38011900 ttgaattacactcccctccactcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 38011801  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||  | ||||||||||||    
T  38011800 agcttgaattacattcccctcccctcttatgttaaaat 38011763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 46682701 - 46682817
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||||| |||  || ||||||||||||||||||| | ||   |||||||| |||| |||||||||| |||||||||   ||||||||| ||    
T  46682701 tttgaattacacttcgctctcctcttatgttaaaatatacactccccttctctcttattcaaaatatattagaaaatatttcacttccctcccttgagag 46682800  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  46682801 aagcttgaattacattc 46682817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 47553187 - 47553279
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||| | | ||| ||||||||| |||| |||||||||| ||||||||||||||||||| | || |  |||||||||||||    
T  47553187 ttatgttaaaatatacattcccctcccctcttattcaaaatatattagaaaatatttcactcatctcccttaagagaagtttgaattacattc 47553279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 7307006 - 7307101
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||||||||  || |||||| || ||||||||||||||| | || |||||   |||||||| || ||||||||||||||||    
T  7307006 cttttatgttaaaatatacacttccttcccctctttttcaaaacatattagaaaatgttccactctcttcccttgagagaaacttgaattacattc 7307101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 36605448 - 36605333
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| |||||  || |||||||||||||||||||  | |  ||||||||| ||||||||||||||| ||||||| ||  || |||||| ||    
T  36605448 tttgaattacactcccctcccctcttatgttaaaatatacactcattttccctcttattcaaaacatattagaaaatatttcattccccttccttgagag 36605349  T
Q  204 caacttgaattacatt 219  Q
     | |||||||||||||    
T  36605348 aagcttgaattacatt 36605333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 13574186 - 13574136
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  13574186 ttatgttaaaatatacacttctctctcctattattcaaaacatattagaaa 13574136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 45195262 - 45195148
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||||| | ||| ||| ||||| |||||||||||||||   ||||||||  ||||||| | || | ||||||||||||||||| ||     
T  45195262 ttatgttaaaatatacactcccctccccttttattcaaaacatattagaaaacttttcactcgcctcccttaagagaagcttgaattacattctcctccc 45195163  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  45195162 ctcttatgttaaaat 45195148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 11916478 - 11916551
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| ||||| | | ||||||||||||||||||||| ||| ||||||||| |||| ||||||||||    
T  11916478 ttgaattacactcccctcctttattatgttaaaatatacacttccctcccctcttattcaaaatatattagaaa 11916551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 31766030 - 31765965
Alignment:
Q  124 tcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||| | ||||||||    
T  31766030 tcttttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatttttcactc 31765965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 44645960 - 44645844
Alignment:
Q  126 ttttatgttaaaatatacacttctc-tctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcca 224  Q
    ||||||||||||||||||||| ||| || ||||||||| |||| |||||||||| ||||||||||||||| | | | || | |||||||||||||| ||     
T  44645960 ttttatgttaaaatatacact-ctcatcccctcttattcaaaatatattagaaaatatttcactcatctctcgtaagagaagcttgaattacattcccct 44645862  T
Q  225 cctattttatgttaaaat 242  Q
    | | | ||||||||||||    
T  44645861 catttcttatgttaaaat 44645844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 4666932 - 4667039
Alignment:
Q  135 aaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattttat 234  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||| ||||||| ||  |||| |||| || | ||||||||| |||| || ||| | |||     
T  4666932 aaaatatacacttccctcccctcttattcaaaacatattagaaaatatttcattcccctcctttgagagaagcttgaattatattcccctcctctcttaa 4667031  T
Q  235 gttaaaat 242  Q
    ||||||||    
T  4667032 gttaaaat 4667039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 47233761 - 47233666
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttga 200  Q
    |||||||||| | ||||  ||| ||||||||||||||||| | |  || ||||||||| ||||||||||||||| ||||||||||  |||||||||    
T  47233761 ttgaattacattccccttctctcttatgttaaaatatacattcccttcccctcttattcaaaacatattagaaaatatttcactcccctcccttga 47233666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 8061053 - 8061167
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  |||| ||| ||||||||||||||||||| | ||  ||||||||| |||||||||||||||   ||||||||  ||||| | | ||     
T  8061053 ttgaattacactctcctcctctcttatgttaaaatatacactccccttccctcttattcaaaacatattagaaaacttttcactcccctcccgtaagaga 8061152  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  8061153 agcttgaattacatt 8061167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 25069026 - 25068916
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattt 231  Q
    ||||||||||||||||| ||| | ||||||| |||||||||||||||  |||||||||  ||||| | | || | |||||||||||||| || ||  | |    
T  25069026 gttaaaatatacacttccctcccatcttattcaaaacatattagaaaaaatttcactcccctcccctaagagaagcttgaattacattcccctcccctct 25068927  T
Q  232 tatgttaaaat 242  Q
    |||||||||||    
T  25068926 tatgttaaaat 25068916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 33126211 - 33126349
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||| | ||||| ||| ||||||||||||||| | ||| ||| |||||| || ||||||||||||||| ||||| ||||  ||||||  | ||    
T  33126211 tttgaattacattcccctcttctcttatgttaaaatatataattccctcccctctttttcaaaacatattagaaaatatttgactcccctccctcaagag 33126310  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     |  ||||||||||||| || ||  | ||||||||||||    
T  33126311 aagtttgaattacattcccctcccctcttatgttaaaat 33126349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 51611826 - 51611900
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||| ||   || ||||||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  51611826 tttgaattacacttctcttccctcttatgttaaaatatacactttcctcccctcttatttaaaacatatgagaaa 51611900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 1845887 - 1846000
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||| ||||||| | ||| ||||||||| |||||||||||||||  ||||||||   ||||| | ||||     
T  1845887 ttgaattacactcccctcccctcttaagttaaaacatacactcccctcccctcttattcaaaacatattagaaaaaatttcactaccctcccctaaaaga 1845986  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  1845987 agcttgaattacat 1846000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 15356961 - 15357034
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||  || ||||||||||||||||| | | ||| ||||||||| |||| ||||||||||    
T  15356961 ttgaattacacttccctcccctcttatgttaaaatatacaatcccctcccctcttattcaaaaaatattagaaa 15357034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 41321540 - 41321653
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  41321540 ttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 41321639  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  41321640 agcttgaattacat 41321653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 47141340 - 47141250
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||| ||| | |  ||||||||||||| |||||||||| ||||||||||  ||  ||||| || ||||||||||||||||    
T  47141340 ttatgttaaaatatacatttccccc--ctcttatttaaaatatattagaaaatatttcactccactttcttgagagaaacttgaattacattc 47141250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 18407249 - 18407133
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||  ||||  || ||||||||||||||||| | | ||| ||||||||| |||||||||||||||   ||||||||  ||||| | | ||    
T  18407249 tttgaattacactctcctcccctcttatgttaaaatatacattcccctcccctcttattcaaaacatattagaaaacttttcactcccctcccctaagag 18407150  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  18407149 aagcttgaattacattc 18407133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 44649316 - 44649200
Alignment:
Q  126 ttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccac 225  Q
    |||||| |||||||||||||||   || ||||||||| |||| ||||||||||  || ||||||||||||| | | || | |||||||||||||| || |    
T  44649316 ttttatattaaaatatacactttcatcccctcttattcaaaatatattagaaaacatatcactcatctcccctaagagaagcttgaattacattcccctc 44649217  T
Q  226 ctattttatgttaaaat 242  Q
     | | ||||||||||||    
T  44649216 atttcttatgttaaaat 44649200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 45738717 - 45738597
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacactt-----ctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttg 199  Q
    |||||||||||| | |||  || ||||||||||||||||||||     | ||| ||||||||| ||||||||||| ||| ||||||| ||  ||||||||    
T  45738717 ttgaattacactcctctcccctcttatgttaaaatatacacttccctcccctcccctcttattcaaaacatattaaaaaatatttcattcccctcccttg 45738618  T
Q  200 aaagcaacttgaattacattc 220  Q
    | || | ||||||||||||||    
T  45738617 agagaagcttgaattacattc 45738597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 50144075 - 50143983
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    |||||||||||||||||||   ||| ||||||||| ||||||||||||||| | ||||||||  |||||| || || | |||||||| |||||    
T  50144075 ttatgttaaaatatacactctcctcccctcttattcaaaacatattagaaaatttttcactcccctccctggagagaagcttgaattgcattc 50143983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 47216894 - 47216828
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatatta 174  Q
    |||||||||||||||  || ||||||||||||||||| ||| ||| ||||||||| |||| ||||||    
T  47216894 aattacacttccctcccctcttatgttaaaatatacaattccctcccctcttattcaaaatatatta 47216828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 12048443 - 12048390
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||| ||||||||||||||||  ||||||||| || |||||||||||||||    
T  12048443 cttttatcttaaaatatacacttccatctcctctttttcaaaacatattagaaa 12048390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 27931352 - 27931279
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  || ||||||||||||||||| ||| ||| ||||||||| |||||| ||| ||||    
T  27931352 ttgaattacactcccctcccctcttatgttaaaatatacaattccctcccctcttattcaaaacaaatttgaaa 27931279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 41575224 - 41575285
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||||| |||| | ||| ||||||||| |||| |||||||||| ||||||||||    
T  41575224 ttatgttaaaatatgcactcccctcccctcttattcaaaatatattagaaaatatttcactc 41575285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 2275806 - 2275711
Alignment:
Q  128 ttatgttaaaatatacacttctc-tctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcc 223  Q
    ||||||||||||||||| ||||| ||  ||||||||||||| || ||||||| ||||| ||||  ||||||||| || | ||| |||||||||||||    
T  2275806 ttatgttaaaatataca-ttctcctccgctcttatttaaaatatgttagaaaatatttaactcccctcccttgagagaagcttcaattacattctcc 2275711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 49129055 - 49129147
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||| ||||||  | |||||||||  |||| ||| || | ||||| ||||||||    
T  49129055 ttatgttaaaatatacactcctcttccctcttattcaaaacattttagaatttttttcactcacatcccctgagagaagcttgagttacattc 49129147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 28045192 - 28045074
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| |||||  || ||||||||||||||||| ||| ||  ||||||| | |||| ||||||||||   |||||| | |||||| | | ||    
T  28045192 tttgaattacactaccctctcctcttatgttaaaatatacaattcccttccctcttactcaaaagatattagaaaacttttcac-cctctcccctaagag 28045094  T
Q  204 caacttgaattacattctcc 223  Q
     | |||||||||||||||||    
T  28045093 aagcttgaattacattctcc 28045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 29344571 - 29344660
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||||| |   | ||||||| ||||||||||||||| |||||||| |  || ||| || || | ||||||||||||||    
T  29344571 ttatgttaaaatatacacttccc---cttcttattcaaaacatattagaaaatatttcaccctccttcctcgagagaagcttgaattacattc 29344660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 6851826 - 6851899
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||| |||||||||   |||||||||||||| |||| | |  || ||||||||| |||||||||||||||    
T  6851826 ttgaattaaacttccctctcattttatgttaaaatctacaatcccatcccctcttattcaaaacatattagaaa 6851899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 18406557 - 18406598
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    |||||||||||| ||||| ||| |||||||||||||||||||    
T  18406557 ttgaattacactcccctcctctcttatgttaaaatatacact 18406598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 22183037 - 22182988
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctct 153  Q
    ||||||||||| ||  ||||||| |||| |||||||||||||||||||||    
T  22183037 tttgaattacatttttctcatctcttatattaaaatatacacttctctct 22182988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 25991415 - 25991346
Alignment:
Q  154 cctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcc 223  Q
    ||||||||| |||||||||||||||  |||||||||  ||||| | | || | |||||||||||||||||    
T  25991415 cctcttattcaaaacatattagaaaaaatttcactctcctcccctaagagaagcttgaattacattctcc 25991346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 33475670 - 33475746
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctct--ctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||  |||  || ||||||||||||||||| ||||||  | ||||||||| |||| ||||||||||    
T  33475670 tttgaattacacttatctctcctcttatgttaaaatatacatttctctcccccctcttattcaaaatatattagaaa 33475746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 10620 - 10758
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| ||| |  || ||||||||||||||||| ||| ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||    
T  10620 tttgaattacactccccgcccctcttatgttaaaatatacatttccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagag 10719  T
Q  204 caacttgaattacattctccacctattttatgttaaaat 242  Q
     | |||||||||||||| || ||  ||||||||||||||    
T  10720 aagcttgaattacattcccctccccttttatgttaaaat 10758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 30353874 - 30353989
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||| ||  || ||||||||||||||||||||| ||| ||||||||||||||||| ||| ||| ||||||||||  ||||||||| ||     
T  30353874 ttgaattacacttccttctcctcttatgttaaaatatacacttccctcccctcttatttaaaacattttaaaaaatatttcactcccctcccttgagaga 30353973  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  30353974 agcttgaattacattc 30353989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 11759418 - 11759532
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  |  ||||||||||||||||||||  ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||||||     
T  11759418 ttgaattacactcccctccccacttatgttaaaatatacactttcctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgaaaga 11759517  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  11759518 agcttgaattacatt 11759532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 44746863 - 44746749
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||| ||||||||||| || | ||| |||||||||| || |||    
T  44746863 ttatgttaaaatatacactcccctctcctcttattcaaaacatattagaaaatatttcactaatctcccttgagagaagctttaattacattcacctcct 44746764  T
Q  228 attttatgttaaaat 242  Q
     | ||| ||||||||    
T  44746763 ctcttaagttaaaat 44746749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 33972329 - 33972466
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||||| ||| ||| ||||||||||||||||| | | ||||| ||||||| ||||||||||||||| ||| |||||| |||||| | | ||     
T  33972329 ttgaattacacttcactcctctcttatgttaaaatatacattaccctctcatcttattcaaaacatattagaaaatatctcactcctctcccctaagaga 33972428  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    ||| ||||||||||||||| ||  | ||||||||||||    
T  33972429 aacatgaattacattctccgcccctcttatgttaaaat 33972466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 14880235 - 14880120
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||||| ||| ||||||||| |||| |||||||||| ||||||| ||  ||||||||| ||     
T  14880235 ttgaattacactcccctcccctcttatgttaaaatatacacttccctcccctcttattaaaaaaatattagaaaatatttcattcccctcccttgagaga 14880136  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  14880135 agcttgaattacattc 14880120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 32905374 - 32905259
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||   ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||  | ||||||| ||     
T  32905374 ttgaattacactctcctccctttttatgttaaaatatacacttccctcccctcttattcaaaacatattagaaaatatttcactccccacccttgagaga 32905275  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  32905274 agcttgaattacattc 32905259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 17565362 - 17565271
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||| ||| | || | |||||||||||||    
T  17565362 ttatgttaaaatatacactcctctcccctcttattcaaaacatattagaaaatatttcactcacctctctttatagaagcttgaattacatt 17565271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 24778018 - 24778136
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||  || ||||||||||||||||||||||||  ||||||||| ||||||||||| ||| |||||||||   | ||||||| ||     
T  24778018 ttgaattacactctcctcccctcttatgttaaaatatacacttctctaccctcttattcaaaacatattataaaatatttcacttcccacccttgagaga 24778117  T
Q  205 aacttgaattacattctcc 223  Q
    | |||||||||||||||||    
T  24778118 agcttgaattacattctcc 24778136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 44283746 - 44283860
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||||||| ||| |||||| || ||||||||||||||| ||||||||||  ||||||||  || | |||||||||||||| || ||     
T  44283746 ttatgttaaaatatacacttcactcccctctttttcaaaacatattagaaaatatttcactcccctcccttgggagaagcttgaattacattcccctccc 44283845  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  44283846 ctcttatgttaaaat 44283860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 8437926 - 8438042
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| | ||| ||| ||||||||||||||||||| | ||| ||| ||||| |||||||||||| || ||||||||||  ||||||| | ||    
T  8437926 tttgaattacactccactcctctcttatgttaaaatatacactcccctccccttttattcaaaacatattaggaaatatttcactcccctcccttaatag 8438025  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  8438026 aagcttgaattacattc 8438042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 37265546 - 37265638
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||||||| ||||||||||  ||||||||| || || || ||||||||||    
T  37265546 ttatgttaaaacatacactttcctctcctcttattcaaaacatattagaaaatatttcactcccctcccttgagaggaatttcaattacattc 37265638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 26928218 - 26928333
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||| ||  | |||||||||||||||||||||  ||| ||||||||| ||||||||||||||| | ||||||||  |||| ||||  |     
T  26928218 ttgaattacacttccttccccatttatgttaaaatatacactttcctcccctcttattcaaaacatattagaaaatttttcactcccctcctttgaggga 26928317  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  26928318 agcttgaattacattc 26928333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 6099368 - 6099441
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||  |||||||||||||||||||||||  ||| ||||||||| |||||| ||||||||    
T  6099368 ttgaattacacttccctctccttttatgttaaaatatacactttcctcccctcttattcaaaacaaattagaaa 6099441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 31846477 - 31846614
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||||||||  || ||||||||||||||||||| | ||  ||||||||| ||||||||||||||| | |||||||   ||||| | | ||     
T  31846477 ttgaattacacttccctcccctcttatgttaaaatatacactccccttccctcttattcaaaacatattagaaaatgtttcacttccctcccctaagaga 31846576  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || | | | ||||||||||||    
T  31846577 agcttgaattacattcccctcttctcttatgttaaaat 31846614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 34679947 - 34679859
Alignment:
Q  129 tatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacat 218  Q
    |||||||||||||||||||  ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | ||||||||||||    
T  34679947 tatgttaaaatatacactttcctc-cctcttattcaaaacatattagaaaatatttcactccgctcccttgagagaagcttgaattacat 34679859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 39998400 - 39998517
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||  || ||| ||||||||| ||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  39998400 ttgaattacactctcctcccctcttaagttaaaatacacactcccctcccctcttattcaaaacatattagaaaatatttcactctcctcccttgagaga 39998499  T
Q  205 aacttgaattacattctc 222  Q
    | ||| ||||||||||||    
T  39998500 agcttcaattacattctc 39998517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 40298972 - 40299062
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||||  ||| ||||||||| ||||||||||||||| ||||| ||||  ||||||||  || ||||||||||||||||    
T  40298972 ttatgttaaaatatacactttcctcccctcttattcaaaacatattagaaaatattttactcccctcccttg--agaaacttgaattacattc 40299062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 32904266 - 32904182
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| |||||  || ||||||||||||||||||||| |||  |||||||| |||| |||||||||| ||||||||||    
T  32904266 ttgaattacactcccctcccctcttatgttaaaatatacacttccctccactcttattcaaaatatattagaaaatatttcactc 32904182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 34364607 - 34364515
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    |||||||||||||||||||   ||| ||||||||| ||||||||||||||| ||||||| ||  ||||||||| || | ||||||||||||||    
T  34364607 ttatgttaaaatatacactctcctcccctcttattcaaaacatattagaaaatatttcattcccctcccttgagagaagcttgaattacattc 34364515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 13422110 - 13421999
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||| |||||  || ||||||||||||||||||| | |||  |||||||| ||||||||||||||| ||||||||||  |||| |||| || |      
T  13422110 aattacactcccctcccctcttatgttaaaatatacactcccctcctctcttattcaaaacatattagaaaatatttcactcccctcctttgagagaaga 13422011  T
Q  208 ttgaattacatt 219  Q
    ||||||||||||    
T  13422010 ttgaattacatt 13421999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 22934319 - 22934456
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  22934319 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 22934418  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | ||||||||| || |||| ||  | ||||||||||||    
T  22934419 agcttgaattagatcctcctcccctcttatgttaaaat 22934456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 34923883 - 34923944
Alignment:
Q  117 tccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||| ||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  34923883 tccctcctctcttatgttaaaatatacactcccctcccctcttatttaaaacatattagaaa 34923944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 14363805 - 14363917
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  14363805 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcacctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 14363904  T
Q  205 aacttgaattaca 217  Q
    | |||||||||||    
T  14363905 agcttgaattaca 14363917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 25954127 - 25954035
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    |||| |||||||||||||||| ||  |||||| || ||||||||| ||||| ||||||||||  ||||||||| || | ||||||||||||||    
T  25954127 ttattttaaaatatacacttcacttacctctttttcaaaacatatcagaaaatatttcactcccctcccttgagagaagcttgaattacattc 25954035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 21304016 - 21304131
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatt-taaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacc 226  Q
    ||||||||||||||||||||| ||| |||||||||  |||| |||||| |||   ||||||||| ||||||| | || | |||||||||||||| || ||    
T  21304016 ttatgttaaaatatacacttccctcccctcttattcaaaaaaatattaaaaaacttttcactcacctcccttaagagaagcttgaattacattcacctcc 21304115  T
Q  227 tattttatgttaaaat 242  Q
    | | ||||||||||||    
T  21304116 tctcttatgttaaaat 21304131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 29459305 - 29459190
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || |||||||||||||| |||| | |||  |||||||| ||||||||||||||| |||| || |   ||||||||| ||     
T  29459305 ttgaattacactcccctctcctcttatgttaaaatatccactcccctcatctcttattcaaaacatattagaaaatattacatttccctcccttgagaga 29459206  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  29459205 agcttgaattacattc 29459190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 37837601 - 37837486
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattag-aaagtatttcactcatctcccttgaaagcaacttgaattacattctccacc 226  Q
    |||| |||||||||||||||| |||  ||| |||| |||||||||||| ||| ||||||||||  ||| ||||| || |||||||||||||||| || ||    
T  37837601 ttatcttaaaatatacacttccctcctctcctattcaaaacatattagaaaattatttcactctcctctcttgagagaaacttgaattacattcccctcc 37837502  T
Q  227 tattttatgttaaaat 242  Q
      | ||||||||||||    
T  37837501 cctcttatgttaaaat 37837486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 41262788 - 41262697
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    ||||||||||||||| ||| | ||||||||||||| ||||||||||||||| | ||||||||  ||||| | | || | |||||||||||||    
T  41262788 ttatgttaaaatatatactcccctctcctcttattcaaaacatattagaaattttttcactcccctcccctaagagaagcttgaattacatt 41262697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 14093514 - 14093592
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttca 186  Q
    ||||||||| | ||||||| ||| ||||||||||||||| | ||| ||||||||| |||| |||||||||| |||||||    
T  14093514 aattacactcctctcatctcttaagttaaaatatacactcccctcccctcttattcaaaatatattagaaaatatttca 14093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 241
Target Start/End: Complemental strand, 24810281 - 24810167
Alignment:
Q  127 tttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacc 226  Q
    |||||||||||||||||  | | ||| ||||||||| ||||||||||||||| | ||||||||  ||||| | | || | ||||||||||||||||| ||    
T  24810281 tttatgttaaaatatacgttcccctcccctcttattcaaaacatattagaaattttttcactcccctcccctaagagaagcttgaattacattctcctcc 24810182  T
Q  227 tattttatgttaaaa 241  Q
      | |||||||||||    
T  24810181 cctcttatgttaaaa 24810167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 40791802 - 40791720
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    |||||||||||| | |||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| | ||||||    
T  40791802 ttgaattacactcctctcccctcttatgttaaaatatacactcccctcacctcttattcaaaacatattagaaattttttcac 40791720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 17496973 - 17496858
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacact-tctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaa 202  Q
    ||||||||||||| |||||  || ||||||||||||||||| | ||| || ||||||||| |||||||| |||||| ||||||||||  ||||||||| |    
T  17496973 tttgaattacact-ccctcccctcttatgttaaaatatacaatctct-tcccctcttattcaaaacataatagaaaatatttcactcccctcccttgaga 17496876  T
Q  203 gcaacttgaattacattc 220  Q
    | | ||| ||||||||||    
T  17496875 gaagcttcaattacattc 17496858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 25485474 - 25485389
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||| |||||  || ||| ||||||||||||||| | ||  ||||||||| |||||||||||||||  |||||||||    
T  25485474 tttgaattacactcccctcccctcttaagttaaaatatacactcccctaccctcttattcaaaacatattagaaaaaatttcactc 25485389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 29636433 - 29636360
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  29636433 ttgaattacactcccctcccctcttaagttaaaatatacactccactcccctcttattcaaaacatattagaaa 29636360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 43764107 - 43764192
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||||| |||  || |||||||||||||||||||   ||| ||| ||||| ||||||||||||||| ||||| ||||    
T  43764107 tttgaattacacttctctcccctcttatgttaaaatatacactctcctccccttttattcaaaacatattagaaaatattttactc 43764192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 13440160 - 13440069
Alignment:
Q  128 ttatgttaaaatatacacttctc-tctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    ||||||||||||||||||| ||| || ||||||||| |||| |||||||||| ||||||||||  ||||||||| || |  ||||||||||||    
T  13440160 ttatgttaaaatatacact-ctcatcccctcttattcaaaatatattagaaaatatttcactcccctcccttgagagaagattgaattacatt 13440069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 4256612 - 4256703
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    ||||||||||||||||| ||| ||  ||||||||| |||||||||| |||| |||| | |||  ||||||||| || | |||||||||||||    
T  4256612 ttatgttaaaatatacatttcacttccctcttattcaaaacatattggaaaatattcctctcccctcccttgagagaagcttgaattacatt 4256703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 8297846 - 8297767
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    ||||||||| |||||  || ||| |||||||||||||||||  || ||||||||| |||||||||||||||  |||||||    
T  8297846 aattacactcccctcccctcttaagttaaaatatacacttccatcccctcttattcaaaacatattagaaaaaatttcac 8297767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 8442709 - 8442800
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    ||||||||||||||||||  | ||  ||||||||| ||||||||||||||| ||||||| ||  ||||||||| || | ||||| |||||||    
T  8442709 ttatgttaaaatatacacacccctaccctcttattcaaaacatattagaaaatatttcattcccctcccttgagagaagcttgagttacatt 8442800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 10216182 - 10216099
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcact 188  Q
    |||||||||||| |||||  || ||  ||||||||||||||| | ||| ||||||||| |||||||||||||||  ||||||||    
T  10216182 ttgaattacactcccctcccctcttcagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcact 10216099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 226
Target Start/End: Original strand, 35366341 - 35366463
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacact-tctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaa 202  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||| ||| || ||| ||||  ||||||||||||||| ||||||||||  | ||| |||||    
T  35366341 tttgaatcacactcccctcctctcttattttaaaatatacactatctttc-ccttttatgcaaaacatattagaaaatatttcactccccacccctgaaa 35366439  T
Q  203 gcaacttgaattacattctccacc 226  Q
    | |  |||||||||||| ||||||    
T  35366440 gaagtttgaattacattgtccacc 35366463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 3075162 - 3075299
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||| | | || |||||||||| ||||| |||| |||  | ||||||||  ||||| | | ||     
T  3075162 ttgaattacactaccctcccctcttatgttaaaatatacattcccctatcctcttattcaaaacttatttgaatttttttcactcccctcccctaagaga 3075261  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||  | ||||||||||||    
T  3075262 agcttgaattacattcccctcccctcttatgttaaaat 3075299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 3075336 - 3075473
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||| |  || ||||||||| ||||| |||| |||  | ||||||||  ||||| | | ||     
T  3075336 ttgaattacactcccctcccctcttatgttaaaatatacactcccttcccctcttattcaaaacttatttgaatttttttcactcccctcccctaagaga 3075435  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||  | ||||||||||||    
T  3075436 agcttgaattacattcccctcccctcttatgttaaaat 3075473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 222
Target Start/End: Complemental strand, 37304939 - 37304822
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  |||  ||||||||||||||||||| ||| ||||| || |||||| |||||||| || |||  ||||||| |  ||||  | ||||     
T  37304939 ttgaattacactctccttctcttttatgttaaaatatagactcctctccccacttattcaaaacatagtataaaacatttcacacccctcctctaaaaga 37304840  T
Q  205 aacttgaattacattctc 222  Q
    |||||||||||| |||||    
T  37304839 aacttgaattacgttctc 37304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 25598504 - 25598421
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||| |||||  || ||| ||||||||||||||| ||||| ||||||||| |||| ||| ||||||  |||||||||    
T  25598504 ttgaattacactcccctcccctcttaagttaaaatatacactactctcccctcttattcaaaatata-tagaaaaaatttcactc 25598421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 31739562 - 31739654
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacat-attagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    ||||||||||||||||||| | ||| |||||||||  ||| || ||||||||   ||||||||||||||||| | || | |||||||||||||    
T  31739562 ttatgttaaaatatacactcccctcccctcttattcgaaatataattagaaaacttttcactcatctcccttaagagaagcttgaattacatt 31739654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 4855982 - 4855939
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacactt 147  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||    
T  4855982 tttgaattacactcctctcatctcttatgttaaaatatacactt 4855939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 17564697 - 17564739
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacact 146  Q
    |||||||||||||||||||  || |||||||||||||||||||    
T  17564697 tttgaattacacttccctcccctcttatgttaaaatatacact 17564739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 6292544 - 6292657
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||| | |||||  || ||| ||||||||||||| | | ||| ||||||||| ||||||||||||| |  |||||||||  ||||| | | ||     
T  6292544 ttgaattacattcccctcccctcttaagttaaaatatacaatcccctcccctcttattcaaaacatattagagaaaatttcactcccctcccctaagaga 6292643  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  6292644 agcttgaattacat 6292657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 4892180 - 4892148
Alignment:
Q  120 ctcatcttttatgttaaaatatacacttctctc 152  Q
    |||| ||||||||||||||||||||||||||||    
T  4892180 ctcaccttttatgttaaaatatacacttctctc 4892148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 8628098 - 8628026
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaa 177  Q
    |||||||||||||  ||  ||| |||||||||||||||||||   ||| ||||||||| ||||||| ||||||    
T  8628098 ttgaattacacttttcttctctcttatgttaaaatatacactctcctcccctcttattcaaaacattttagaa 8628026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 11140124 - 11140192
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatatt 173  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| |||| |||| |||| |||||    
T  11140124 ttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcatattcaaaatatatt 11140192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 32522551 - 32522436
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||   ||||||| ||||||||||||||||||||| ||  ||||||||| |||| |||||||||| ||||||||||  ||||||||||||    
T  32522551 tttgaattacactcatctcatctcttatgttaaaatatacacttcccttccctcttattcaaaatatattagaaaatatttcactcccctcccttgaaag 32522452  T
Q  204 caacttgaattacatt 219  Q
     | |||||||||||||    
T  32522451 aagcttgaattacatt 32522436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 2091716 - 2091829
Alignment:
Q  106 tgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagca 205  Q
    ||||||||||| |||||  || ||||||||||||||||||||  ||  ||||||||| ||||||||||||||| ||||||||||  ||||||||| || |    
T  2091716 tgaattacactcccctcccctcttatgttaaaatatacacttaccttccctcttattcaaaacatattagaaaatatttcactctcctcccttgagagaa 2091815  T
Q  206 acttgaattacatt 219  Q
     |||||||||||||    
T  2091816 gcttgaattacatt 2091829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 34794569 - 34794454
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||||  ||| | |||| || ||||||||||||||| || |||||||  ||||||||| ||     
T  34794569 ttgaattacactcccctcccctcttatgttaaaatatacactttcctcccatctttttcaaaacatattagaaaatacttcactcccctcccttgagaga 34794470  T
Q  205 aacttgaattacattc 220  Q
    ||||||||||||||||    
T  34794469 aacttgaattacattc 34794454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 31881868 - 31881941
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||| |||||  |||||||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  31881868 ttgaattacactcccctccccttttatgttaaaatatacactcccctctcctcttattcaaaacatattagaaa 31881941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 2523361 - 2523269
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||| ||||| ||| ||||||| | ||||||||||||||| ||||||||||| |||| |||| || | ||||||||||||||    
T  2523361 ttatgttaaaatatatacttccctcccctcttactcaaaacatattagaaaatatttcactcacctcctttgagagaagcttgaattacattc 2523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 12693873 - 12693957
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||||| |||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||    
T  12693873 ttgaattacacttctctctcctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactc 12693957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 21801966 - 21802078
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||   | ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| ||     
T  21801966 ttgaattacactcccctccattcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagaga 21802065  T
Q  205 aacttgaattaca 217  Q
    | ||| |||||||    
T  21802066 agcttaaattaca 21802078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 33950276 - 33950368
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    |||| |||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||  ||||||||| || | ||||||||||||||    
T  33950276 ttattttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttcactcccctcccttgagagaagcttgaattacattc 33950368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 28494932 - 28494825
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||||| ||| ||| |||||||||||||||||| || ||| ||||||||| |||| ||||||||||  ||||||||| |||||||| | || | |    
T  28494932 aattacacttcactcttctcttatgttaaaatatacacatcactcccctcttattaaaaatatattagaaaacatttcactcctctcccttaagagaagc 28494833  T
Q  208 ttgaatta 215  Q
    ||||||||    
T  28494832 ttgaatta 28494825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 29807341 - 29807234
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||||| ||| ||| |||||||||||||||||| || ||| ||||||||| |||| ||||||||||  ||||||||| |||||||| | || | |    
T  29807341 aattacacttcactcttctcttatgttaaaatatacacatcactcccctcttattaaaaatatattagaaaacatttcactcctctcccttaagagaagc 29807242  T
Q  208 ttgaatta 215  Q
    ||||||||    
T  29807241 ttgaatta 29807234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 188480 - 188367
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||||||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  188480 ttgaattacactcccctcccctcttaagttaaaatatacactcccctctcctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 188381  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  188380 agcttgaattacat 188367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 16326118 - 16326002
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||  ||||  || |||| |||||||||||||| | ||| ||||||||| ||| ||||||||||| ||||||||||  |||||| || ||    
T  16326118 tttgaattacactcacctcccctcttatattaaaatatacactcccctcccctcttattcaaaccatattagaaaatatttcactcccctccctcgagag 16326019  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  16326018 aagcttgaattacattc 16326002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 16349516 - 16349400
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||  ||||  || |||| |||||||||||||| | ||| ||||||||| ||| ||||||||||| ||||||||||  |||||| || ||    
T  16349516 tttgaattacactcacctcccctcttatattaaaatatacactcccctcccctcttattcaaaccatattagaaaatatttcactcccctccctcgagag 16349417  T
Q  204 caacttgaattacattc 220  Q
     | ||||||||||||||    
T  16349416 aagcttgaattacattc 16349400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 32003887 - 32003796
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacatt 219  Q
    |||||||||||||||||||   ||| ||||||||| ||||||||||||||| ||||||| ||  ||||||||| || | |||||||||||||    
T  32003887 ttatgttaaaatatacactctcctcccctcttattcaaaacatattagaaaatatttcattcccctcccttgagagaagcttgaattacatt 32003796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 9240885 - 9240999
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| |||||  || ||| ||||||||||||||||| ||| ||||||||| ||| |||||||||||  |||||||||  ||||| | | ||    
T  9240885 tttgaattacactcccctcccctcttaagttaaaatatacacttccctcccctcttattcaaagcatattagaaaaaatttcactcccctcccctaagag 9240984  T
Q  204 caacttgaattacat 218  Q
     | ||||||||||||    
T  9240985 aagcttgaattacat 9240999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 7127704 - 7127591
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  |||||| |||||||| |||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  7127704 ttgaattacactcccctccccttttaagttaaaatgtacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 7127605  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  7127604 agcttgaattacat 7127591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 12026244 - 12026131
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||||||||||||||||||| | ||| ||||||||| ||||||||||||| |  |||||||||  ||||| | | ||     
T  12026244 ttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagagaaaatttcactcccctcccctaagaga 12026145  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  12026144 agcttgaattacat 12026131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 10702298 - 10702382
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||||||||  || ||||||||||||||||||| | ||| ||||||||| |||||||| | |||| | ||||||||    
T  10702298 ttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacataattgaaaatttttcactc 10702382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 24619958 - 24620070
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    ||||||||||||||||||||| ||| ||||| ||| ||||| ||||||||| ||| ||||||  ||||||||  || |  |||||||||||||||| ||     
T  24619958 ttatgttaaaatatacacttccctcccctctgattcaaaacgtattagaaaatatatcactctcctcccttggtagaagtttgaattacattctcctccc 24620057  T
Q  228 attttatgttaaa 240  Q
     | ||||||||||    
T  24620058 ctcttatgttaaa 24620070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 14313896 - 14313818
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatt 183  Q
    |||||||||||| |||||  || ||||||||||||||||| | | ||| ||||||||| ||||||||||||||| ||||    
T  14313896 ttgaattacactcccctcccctcttatgttaaaatatacaatcccctcccctcttattcaaaacatattagaaaatatt 14313818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 34280725 - 34280615
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaac 207  Q
    ||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | || | |    
T  34280725 aattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagagaagc 34280626  T
Q  208 ttgaattacat 218  Q
    |||||||||||    
T  34280625 ttgaattacat 34280615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 5443038 - 5443111
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||   | ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  5443038 ttgaattacacttccctcccttcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaa 5443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 12033164 - 12033051
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| ||||||||||||| |  |||||||||  ||||| | | ||     
T  12033164 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagagaaaatttcactcccctcccctaagaga 12033065  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  12033064 agcttgaattacat 12033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 14873045 - 14873182
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||| | | ||| ||||||||| |||||||||||||||  ||||||| |  ||||| | | ||     
T  14873045 ttgaattacactcccctcccctcttaagttaaaatatacattcccctcccctcttattcaaaacatattagaaaaaatttcacccccctcccctaagaga 14873144  T
Q  205 aacttgaattacattctccacctattttatgttaaaat 242  Q
    | |||||||||||||| || ||  | ||||||||||||    
T  14873145 agcttgaattacattcccctcccctcttatgttaaaat 14873182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 32113766 - 32113839
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||  || ||||||||||||||||||| | ||| ||||||||| |||| || |||||||    
T  32113766 ttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaatatgttagaaa 32113839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 2655630 - 2655546
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||||||||| ||| ||||||||||||||| ||| |||||   | ||||| ||||||||||| |||  |||||||||    
T  2655630 ttgaattacacttccctcctctcttatgttaaaatatatactcctctcctattttattcaaaacatattacaaaaaatttcactc 2655546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 17312145 - 17312054
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctccc 196  Q
    |||||||||||| |||||  || ||||||||||||||| |||  | || ||||||||| |||||||||||||||  |||| |||| ||||||    
T  17312145 ttgaattacactcccctccactcttatgttaaaatataaactcttatcccctcttattcaaaacatattagaaaacattttactcctctccc 17312054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 11522827 - 11522909
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||| ||||||||||  |||||||    
T  11522827 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaatatattagaaaaaatttcac 11522909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 22021999 - 22022113
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||| ||||||||  || ||||||| ||||||||||||  |||  ||||| || ||||||||||||||| | ||||||||  ||||| | | ||     
T  22021999 ttgaattacccttccctcccctcttatgtttaaatatacactttcctcctctctttttcaaaacatattagaaattttttcactctcctcccctaagaga 22022098  T
Q  205 aacttgaattacatt 219  Q
    | |||||||||||||    
T  22022099 agcttgaattacatt 22022113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 12026281 - 12026385
Alignment:
Q  137 aatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattttatgt 236  Q
    |||||||||| ||||| ||||||||  |||| |||||||||| ||||||||||  | ||| |||||| | ||||||||||||| | ||||  | ||||||    
T  12026281 aatatacact-ctctcccctcttatgcaaaatatattagaaaatatttcactccccacccgtgaaagaagcttgaattacatttttcaccactcttatgt 12026379  T
Q  237 taaaat 242  Q
    ||||||    
T  12026380 taaaat 12026385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 12033201 - 12033305
Alignment:
Q  137 aatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattttatgt 236  Q
    |||||||||| ||||| ||||||||  |||| |||||||||| ||||||||||  | ||| |||||| | ||||||||||||| | ||||  | ||||||    
T  12033201 aatatacact-ctctcccctcttatgcaaaatatattagaaaatatttcactccccacccgtgaaagaagcttgaattacatttttcaccactcttatgt 12033299  T
Q  237 taaaat 242  Q
    ||||||    
T  12033300 taaaat 12033305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 25527757 - 25527830
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||  ||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  25527757 ttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaa 25527830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 25577248 - 25577135
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| || ||  || ||| |||||||||||||||   ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  25577248 ttgaattacactcccatcccctcttaagttaaaatatacactcacctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 25577149  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  25577148 agcttgaattacat 25577135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 242
Target Start/End: Complemental strand, 33276435 - 33276319
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctcca 224  Q
    |||||||||||||| ||||||||| |||  ||||| || |||||||||| |||| ||||||||||  ||||||| | || | ||| |||||||||| ||     
T  33276435 cttttatgttaaaacatacacttccctcatctctttttcaaaacatatt-gaaaatatttcactcccctcccttaagagaagcttaaattacattcccct 33276337  T
Q  225 cctattttatgttaaaat 242  Q
    ||  | ||||||||||||    
T  33276336 cccctcttatgttaaaat 33276319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 31281662 - 31281714
Alignment:
Q  127 tttatgttaaaatatacacttctctct-cctcttatttaaaacatattagaaa 178  Q
    |||||||||||||||||| || ||||| ||||||||| |||||||||||||||    
T  31281662 tttatgttaaaatatacatttttctctccctcttattcaaaacatattagaaa 31281714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 4100545 - 4100684
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctc-----ttatttaaaacatattagaaagtatttcactcatctcccttgaaa 202  Q
    ||||||||| |||||  || ||||||||||||||||||| | ||| ||||     ||||| ||||||| |||||||   ||||||||  ||||||| | |    
T  4100545 aattacactcccctcccctcttatgttaaaatatacactcccctcccctcccctcttattcaaaacatgttagaaaacttttcactcccctcccttaaga 4100644  T
Q  203 gcaacttgaattacattctccacctattttatgttaaaat 242  Q
    | | ||||||||||||||||| ||  | ||||||||||||    
T  4100645 gaagcttgaattacattctcctcccctcttatgttaaaat 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 6936401 - 6936475
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctc-tctcctcttatttaaaacatattagaaa 178  Q
    |||||||||||||  ||||  || |||||||||||||||||| |||| || ||| |||||||||||||||||||||    
T  6936401 tttgaattacactctcctcccctcttatgttaaaatatacac-tctcatcccctattatttaaaacatattagaaa 6936475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 26391423 - 26391518
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttga 200  Q
    ||||||||||||   ||| ||| |||||||| |||||||| || |||| | ||||||| |||| |||||| ||| ||||||||||  |||||||||    
T  26391423 ttgaattacactcatctcctctcttatgttagaatatacatttttctcccttcttattcaaaatatattaaaaaatatttcactcccctcccttga 26391518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 30461468 - 30461515
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctc 152  Q
    |||| |||||||||||||  || |||||||||||||||||||||||||    
T  30461468 ttgatttacacttccctcccctcttatgttaaaatatacacttctctc 30461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 34793888 - 34793935
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctct 151  Q
    ||||||| ||||| |||||  |||||||||||||||||||||||||||    
T  34793888 tttgaatcacactcccctctccttttatgttaaaatatacacttctct 34793935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 3767766 - 3767680
Alignment:
Q  132 gttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacat 218  Q
    ||||||||||||||| ||||| ||||||||| |||| ||||| ||||  |||||||||  ||||  | | || ||||||||||||||    
T  3767766 gttaaaatatacactcctctcccctcttattcaaaatatatttgaaaaaatttcactcccctcctctaagagaaacttgaattacat 3767680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 28712933 - 28713070
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    ||||||||||||  ||||  || |||| | ||| ||||||||  ||||  |||||||  ||||||||| ||||| | ||||||||  | ||||||||||     
T  28712933 ttgaattacactcacctcccctcttatctaaaagtatacactcatctcctctcttatgcaaaacatat-agaaaatgtttcactccccacccttgaaaga 28713031  T
Q  205 aacttgaattacatt-ctccacctattttatgttaaaat 242  Q
    | ||||||||||||| |||| ||| ||||||||||||||    
T  28713032 agcttgaattacattcctccgcctcttttatgttaaaat 28713070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 33266757 - 33266723
Alignment:
Q  125 cttttatgttaaaatatacacttctctctcctctt 159  Q
    ||||||| |||||||||||||||||||||||||||    
T  33266757 cttttattttaaaatatacacttctctctcctctt 33266723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 4125958 - 4126046
Alignment:
Q  154 cctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacctattttatgttaaaat 242  Q
    ||||||||| ||||||| |||||||   ||||||||  ||||||| | || | ||||||||||||||||| ||  | ||||||||||||    
T  4125958 cctcttattcaaaacatgttagaaaacttttcactcccctcccttaagagaagcttgaattacattctcctcccctcttatgttaaaat 4126046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 11722085 - 11722000
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcat 191  Q
    |||||||||||||   ||| ||| ||| ||||| ||||||||  ||||  ||||||||| |||||||||||||||  |||||||||||    
T  11722085 tttgaattacactcatctcttctcttaagttaagatatacac--ctcttccctcttattcaaaacatattagaaaacatttcactcat 11722000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 32130963 - 32131078
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacat-attagaaagtatttcactcatctcccttgaaa 202  Q
    ||||||||||||| |||||  || ||||||||||||||||||||| ||  |||||||||  ||| || ||||||||  |||||||||  ||||| | | |    
T  32130963 tttgaattacactcccctcc-ctcttatgttaaaatatacacttcccttccctcttattcgaaatataattagaaaaaatttcactcccctcccctaaga 32131061  T
Q  203 gcaacttgaattacatt 219  Q
    | | |||||||||||||    
T  32131062 gaagcttgaattacatt 32131078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 34250113 - 34250168
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtattt 184  Q
    ||||||||||||||||||  | ||| ||||||||| ||||||||||||||| |||||    
T  34250113 ttatgttaaaatatacacccc-ctcccctcttattcaaaacatattagaaaatattt 34250168  T

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Target: scaffold0712 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 3683 - 3797
Alignment:
Q  109 attacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaact 208  Q
    |||||||||| |||  |||||||||||||||||||| ||||||   |||||||| ||||||||||||||| ||| ||| ||| ||||||||| || | ||    
T  3683 attacacttctctccccttttatgttaaaatatacatttctcttctctcttattcaaaacatattagaaaatatatcattcacctcccttgagagaagct 3782  T
Q  209 tgaattacattctcc 223  Q
    |||||||||||||||    
T  3783 tgaattacattctcc 3797  T

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Target: scaffold0709 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 3703 - 3817
Alignment:
Q  109 attacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaact 208  Q
    |||||||||| |||  |||||||||||||||||||| ||||||   |||||||| ||||||||||||||| ||| ||| ||| ||||||||| || | ||    
T  3703 attacacttctctccccttttatgttaaaatatacatttctcttctctcttattcaaaacatattagaaaatatatcattcacctcccttgagagaagct 3802  T
Q  209 tgaattacattctcc 223  Q
    |||||||||||||||    
T  3803 tgaattacattctcc 3817  T

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Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 14076 - 14195
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||||| | |||  || ||||||||||||||||||||| |||   ||||||| |||||||| |||||| |||||||||| | |||||||| ||    
T  14076 tttgaattacactcctctcccctcttatgttaaaatatacacttccctccattcttattcaaaacatactagaaaatatttcactcctatcccttgagag 14175  T
Q  204 caacttgaattacattctcc 223  Q
     | |||||||||||||||||    
T  14176 aagcttgaattacattctcc 14195  T

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Target: scaffold0003; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 421976 - 421861
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| || ||  || ||||||| ||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||  ||||| ||| ||     
T  421976 ttgaattacactcccttcccctcttatgtttaaatatacacttccctcccctcttattcaaaacatattagaaaatatttcactcccctcccatgagaga 421877  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  421876 agcttgaattacattc 421861  T

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Target: scaffold1192 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 221
Target Start/End: Original strand, 187 - 304
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    ||||||||||| | |||||  || ||||||||||||||||||||| | | ||||||||| ||||||||||||||| |||||||||   ||| ||||| ||    
T  187 tttgaattacagtcccctcccctcttatgttaaaatatacacttcccacccctcttattcaaaacatattagaaaatatttcacttccctctcttgagag 286  T
Q  204 caacttgaattacattct 221  Q
     | |||||||||||||||    
T  287 aagcttgaattacattct 304  T

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Target: scaffold0361 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 16513 - 16628
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||   | ||||||||||||||||||| ||||| ||||||||| |||| ||||||| || ||||||||||  ||||||| | ||     
T  16513 ttgaattacactcccctcccatcttatgttaaaatatacactcctctcccctcttattcaaaatatattaggaaatatttcactcccctcccttaataga 16612  T
Q  205 aacttgaattacattc 220  Q
    | ||||||||||||||    
T  16613 agcttgaattacattc 16628  T

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Target: scaffold0004 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 351960 - 351846
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattctccacct 227  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||||||||  ||||  | | || | | ||||||||||||||| ||     
T  351960 ttatgttaaaatatacacttttctcccctcttattcaaaacatattagaaaatatttcactctcctcctctaagagaagcctgaattacattctcctccc 351861  T
Q  228 attttatgttaaaat 242  Q
     | ||||||||||||    
T  351860 ctcttatgttaaaat 351846  T

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Target: scaffold0289 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 3459 - 3551
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagcaacttgaattacattc 220  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||||||| |||||  ||| |||||||||| || | |||||| |||||||    
T  3459 ttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaatatttatctcctctcccttgagagaagcttgaactacattc 3551  T

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Target: scaffold0105 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 19693 - 19580
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaagc 204  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||||  ||||| | | ||     
T  19693 ttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcactcccctcccctaagaga 19594  T
Q  205 aacttgaattacat 218  Q
    | ||||||||||||    
T  19593 agcttgaattacat 19580  T

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Target: scaffold0115 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 31400 - 31316
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||||| ||||  |||||||||||||||||||||| | ||| | |||| |||||||||||||| |||  |||||||||    
T  31400 ttgaattacactttcctccccttttatgttaaaatatacactcccctcccttcttttttaaaacatattacaaaagatttcactc 31316  T

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Target: scaffold0340 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 12907 - 12788
Alignment:
Q  104 tttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactcatctcccttgaaag 203  Q
    |||||||||||||  | || ||| ||||||||||||||||| | | ||  ||||||||| |||||||||||||||   ||||||||||||| ||| | ||    
T  12907 tttgaattacactctcttcctctcttatgttaaaatatacattccccttccctcttattcaaaacatattagaaaacttttcactcatctcacttaagag 12808  T
Q  204 caacttgaattacattctcc 223  Q
     | ||||||||| |||||||    
T  12807 aagcttgaattatattctcc 12788  T

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Target: scaffold2113 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 754 - 836
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcac 187  Q
    |||||||||||| |||||  || ||| ||||||||||||||| | ||| ||||||||| |||||||||||||||  |||||||    
T  754 ttgaattacactcccctccactcttaagttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatttcac 836  T

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Target: scaffold0695 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 2933 - 2855
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttca 186  Q
    ||||||||| | ||||||| ||| ||||||||||||||| | ||| ||||||||| |||| |||||||||| |||||||    
T  2933 aattacactcctctcatctcttaagttaaaatatacactcccctcccctcttattcaaaatatattagaaaatatttca 2855  T

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Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 27026 - 26976
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  27026 ttatgttaaaatatacacttctctcccctcttattcaaaacataatagaaa 26976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 11019 - 11080
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    ||||||||||| ||||||| | ||| ||| ||||| ||||||||||||||| ||||||||||    
T  11019 ttatgttaaaacatacactcccctcccctattattcaaaacatattagaaaatatttcactc 11080  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 25907 - 25846
Alignment:
Q  128 ttatgttaaaatatacacttctctctcctcttatttaaaacatattagaaagtatttcactc 189  Q
    |||||||||||||||||||  ||| |||||||||| |||| | ||||||||| |||||||||    
T  25907 ttatgttaaaatatacactcttctatcctcttattcaaaatacattagaaagcatttcactc 25846  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 184616 - 184655
Alignment:
Q  139 tatacacttctctctcctcttatttaaaacatattagaaa 178  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  184616 tatacatttctctcccctcttatttaaaacatattagaaa 184655  T

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Target: scaffold0098 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 34361 - 34304
Alignment:
Q  105 ttgaattacacttccctcatcttttatgttaaaatatacacttctctctcctcttatt 162  Q
    ||||||||| || |||||  || ||| ||||||||||||||||| |||||||||||||    
T  34361 ttgaattacgctcccctcccctcttaagttaaaatatacacttccctctcctcttatt 34304  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 858 - 819
Alignment:
Q  108 aattacacttccctcatcttttatgttaaaatatacacttc 148  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  858 aattacact-ccctcatcttttatgttaaaatatgcacttc 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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