View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14586_low_36 (Length: 237)

Name: NF14586_low_36
Description: NF14586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14586_low_36
NF14586_low_36
[»] chr2 (51 HSPs)
chr2 (1-221)||(18996668-18996888)
chr2 (4-92)||(11796525-11796613)
chr2 (1-92)||(38911048-38911139)
chr2 (1-92)||(11564180-11564271)
chr2 (1-92)||(14742775-14742866)
chr2 (7-92)||(3045316-3045401)
chr2 (1-92)||(18468155-18468246)
chr2 (1-92)||(22606694-22606785)
chr2 (21-92)||(33476288-33476359)
chr2 (1-92)||(34173425-34173516)
chr2 (1-92)||(37009372-37009462)
chr2 (7-92)||(13873703-13873788)
chr2 (7-92)||(14013828-14013913)
chr2 (1-92)||(35658616-35658708)
chr2 (1-93)||(36451235-36451327)
chr2 (1-92)||(31364257-31364348)
chr2 (17-92)||(37199327-37199402)
chr2 (7-92)||(7939600-7939684)
chr2 (2-82)||(32875428-32875508)
chr2 (1-92)||(3515183-3515274)
chr2 (1-92)||(5790280-5790371)
chr2 (1-92)||(6229595-6229686)
chr2 (1-92)||(14736402-14736492)
chr2 (1-92)||(33146306-33146396)
chr2 (6-92)||(40769088-40769173)
chr2 (1-92)||(8727075-8727167)
chr2 (1-92)||(31709338-31709427)
chr2 (4-92)||(34831021-34831109)
chr2 (1-92)||(10356734-10356825)
chr2 (1-92)||(15006807-15006898)
chr2 (21-92)||(24758512-24758583)
chr2 (1-92)||(11564797-11564889)
chr2 (4-92)||(28167815-28167903)
chr2 (24-92)||(34580573-34580641)
chr2 (17-92)||(314711-314786)
chr2 (29-92)||(6077491-6077554)
chr2 (1-92)||(12413620-12413711)
chr2 (1-92)||(12425680-12425771)
chr2 (17-68)||(16599917-16599968)
chr2 (21-92)||(33886670-33886741)
chr2 (1-92)||(37329971-37330062)
chr2 (1-92)||(41077765-41077856)
chr2 (29-92)||(41521274-41521337)
chr2 (1-92)||(5113984-5114076)
chr2 (1-57)||(6077680-6077736)
chr2 (1-92)||(17829429-17829521)
chr2 (29-92)||(40020369-40020430)
chr2 (1-92)||(11942287-11942378)
chr2 (29-91)||(36143488-36143550)
chr2 (1-45)||(32878967-32879011)
chr2 (29-92)||(35050061-35050125)
[»] chr5 (44 HSPs)
chr5 (1-92)||(8438010-8438101)
chr5 (5-92)||(8573064-8573151)
chr5 (1-88)||(18337897-18337984)
chr5 (1-92)||(35751894-35751984)
chr5 (1-92)||(19408917-19409008)
chr5 (1-92)||(20183744-20183835)
chr5 (1-92)||(22730770-22730862)
chr5 (4-92)||(36737160-36737248)
chr5 (1-92)||(13686241-13686332)
chr5 (1-92)||(17780620-17780711)
chr5 (1-92)||(27302237-27302327)
chr5 (6-92)||(15144795-15144881)
chr5 (7-92)||(10666247-10666332)
chr5 (27-92)||(38955298-38955363)
chr5 (1-92)||(5138676-5138767)
chr5 (23-92)||(6029886-6029955)
chr5 (1-92)||(12585880-12585969)
chr5 (1-92)||(4876982-4877073)
chr5 (1-92)||(9018025-9018116)
chr5 (1-92)||(14594346-14594437)
chr5 (1-92)||(21639398-21639489)
chr5 (1-92)||(30783091-30783182)
chr5 (1-92)||(42598587-42598678)
chr5 (26-92)||(18523999-18524065)
chr5 (36-92)||(34951508-34951564)
chr5 (6-89)||(141146-141229)
chr5 (21-92)||(1405967-1406038)
chr5 (1-92)||(20570432-20570523)
chr5 (1-92)||(35751252-35751343)
chr5 (26-92)||(32348215-32348281)
chr5 (21-92)||(1931678-1931749)
chr5 (1-92)||(3933688-3933778)
chr5 (1-92)||(20540682-20540773)
chr5 (4-74)||(2553860-2553930)
chr5 (26-92)||(21687762-21687828)
chr5 (3-92)||(17968197-17968286)
chr5 (1-92)||(10687860-10687952)
chr5 (1-89)||(36742394-36742482)
chr5 (21-92)||(10402314-10402385)
chr5 (1-92)||(27979504-27979594)
chr5 (26-92)||(6123663-6123727)
chr5 (18-92)||(6136128-6136200)
chr5 (1-74)||(32458133-32458206)
chr5 (32-92)||(40957020-40957080)
[»] scaffold0003 (2 HSPs)
scaffold0003 (4-92)||(14435-14523)
scaffold0003 (1-68)||(421557-421625)
[»] chr7 (46 HSPs)
chr7 (4-92)||(16425722-16425810)
chr7 (1-92)||(29103904-29103995)
chr7 (1-92)||(19332763-19332854)
chr7 (1-92)||(38988024-38988115)
chr7 (7-92)||(36848215-36848300)
chr7 (1-92)||(8122988-8123079)
chr7 (5-92)||(42811311-42811398)
chr7 (4-92)||(11640163-11640251)
chr7 (1-89)||(48872285-48872373)
chr7 (1-92)||(13068118-13068209)
chr7 (1-92)||(31221173-31221263)
chr7 (25-92)||(43450508-43450575)
chr7 (26-92)||(10410359-10410425)
chr7 (1-89)||(38790341-38790430)
chr7 (1-92)||(13904037-13904128)
chr7 (1-92)||(22711906-22711997)
chr7 (1-92)||(23226609-23226700)
chr7 (1-92)||(23233136-23233227)
chr7 (1-92)||(23235762-23235853)
chr7 (1-92)||(23242797-23242888)
chr7 (1-92)||(46010830-46010921)
chr7 (1-92)||(48982146-48982236)
chr7 (1-92)||(32387752-32387841)
chr7 (4-91)||(12679241-12679328)
chr7 (1-68)||(36687677-36687744)
chr7 (23-92)||(11696482-11696551)
chr7 (32-93)||(43133714-43133775)
chr7 (17-92)||(19434895-19434971)
chr7 (1-92)||(2790543-2790634)
chr7 (1-92)||(29615819-29615910)
chr7 (34-91)||(12677347-12677404)
chr7 (23-92)||(40401828-40401897)
chr7 (1-92)||(3341156-3341246)
chr7 (1-92)||(33869637-33869728)
chr7 (1-92)||(40189337-40189428)
chr7 (33-89)||(1573498-1573554)
chr7 (40-92)||(46208457-46208509)
chr7 (1-92)||(5228247-5228338)
chr7 (3-90)||(8379465-8379552)
chr7 (5-92)||(34835079-34835166)
chr7 (1-92)||(38670282-38670373)
chr7 (34-92)||(28442016-28442074)
chr7 (26-92)||(36889685-36889751)
chr7 (32-92)||(5952053-5952113)
chr7 (1-68)||(31872841-31872909)
chr7 (1-92)||(33576402-33576494)
[»] scaffold0368 (1 HSPs)
scaffold0368 (1-92)||(10970-11061)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-92)||(26623-26714)
[»] chr8 (38 HSPs)
chr8 (1-92)||(4256940-4257031)
chr8 (7-92)||(34364190-34364275)
chr8 (1-92)||(17564940-17565031)
chr8 (1-92)||(11759778-11759871)
chr8 (17-92)||(32903869-32903944)
chr8 (1-92)||(40299299-40299390)
chr8 (1-92)||(42166294-42166385)
chr8 (23-92)||(14879793-14879862)
chr8 (1-86)||(34678823-34678908)
chr8 (1-92)||(13439741-13439832)
chr8 (1-92)||(17496534-17496625)
chr8 (17-92)||(24778388-24778463)
chr8 (1-92)||(37265856-37265947)
chr8 (7-92)||(8443043-8443128)
chr8 (1-92)||(14093863-14093954)
chr8 (1-92)||(37872579-37872670)
chr8 (1-92)||(39998749-39998840)
chr8 (1-92)||(40791362-40791453)
chr8 (6-92)||(8438284-8438370)
chr8 (27-92)||(29621466-29621531)
chr8 (1-92)||(17734624-17734715)
chr8 (1-92)||(33969273-33969364)
chr8 (1-92)||(41262342-41262433)
chr8 (34-92)||(32904932-32904990)
chr8 (1-92)||(13421675-13421767)
chr8 (1-68)||(30354260-30354328)
chr8 (7-92)||(45488418-45488505)
chr8 (29-92)||(30991073-30991136)
chr8 (26-92)||(44284090-44284154)
chr8 (3-89)||(3939931-3940017)
chr8 (1-92)||(4855647-4855738)
chr8 (5-76)||(31846834-31846905)
chr8 (29-92)||(33972711-33972774)
chr8 (1-92)||(34695327-34695417)
chr8 (1-92)||(34925116-34925207)
chr8 (21-92)||(42861849-42861920)
chr8 (3-91)||(35366706-35366794)
chr8 (1-92)||(36016473-36016565)
[»] chr1 (58 HSPs)
chr1 (1-92)||(42830914-42831005)
chr1 (1-92)||(46683056-46683147)
chr1 (4-92)||(43320297-43320385)
chr1 (1-92)||(2275360-2275451)
chr1 (17-92)||(4007810-4007885)
chr1 (6-92)||(25087617-25087702)
chr1 (7-92)||(36604998-36605083)
chr1 (23-92)||(45738271-45738340)
chr1 (1-92)||(17109578-17109670)
chr1 (17-92)||(45193986-45194062)
chr1 (1-92)||(47233319-47233410)
chr1 (1-92)||(50143656-50143747)
chr1 (7-92)||(4667260-4667345)
chr1 (1-92)||(33126567-33126656)
chr1 (1-92)||(41574859-41574951)
chr1 (1-92)||(51362095-51362187)
chr1 (1-92)||(19071982-19072073)
chr1 (1-92)||(19119872-19119963)
chr1 (17-92)||(23739416-23739491)
chr1 (1-92)||(29344875-29344966)
chr1 (1-92)||(37419075-37419166)
chr1 (1-92)||(41575554-41575645)
chr1 (1-92)||(27225947-27226036)
chr1 (1-92)||(8061409-8061500)
chr1 (1-92)||(12057370-12057461)
chr1 (1-92)||(25991022-25991113)
chr1 (1-90)||(18572180-18572269)
chr1 (3-92)||(49129391-49129480)
chr1 (29-92)||(7307322-7307383)
chr1 (4-84)||(35383306-35383385)
chr1 (1-92)||(831537-831628)
chr1 (1-92)||(1116709-1116800)
chr1 (41-92)||(6644747-6644798)
chr1 (1-92)||(13573769-13573860)
chr1 (1-92)||(27532181-27532272)
chr1 (21-92)||(29510083-29510154)
chr1 (1-92)||(47291951-47292042)
chr1 (1-92)||(51764455-51764546)
chr1 (30-92)||(28971102-28971164)
chr1 (31-92)||(24065385-24065446)
chr1 (1-92)||(11916830-11916919)
chr1 (30-86)||(19998013-19998069)
chr1 (1-92)||(36511775-36511863)
chr1 (4-92)||(47553522-47553610)
chr1 (1-92)||(28197853-28197944)
chr1 (1-92)||(31765605-31765696)
chr1 (1-92)||(44645535-44645626)
chr1 (1-92)||(44648891-44648982)
chr1 (1-92)||(45737576-45737667)
chr1 (1-92)||(47216327-47216418)
chr1 (34-92)||(9091307-9091365)
chr1 (30-92)||(10012196-10012258)
chr1 (6-92)||(28044749-28044835)
chr1 (30-92)||(51612209-51612271)
chr1 (32-92)||(15357346-15357406)
chr1 (17-68)||(16536646-16536698)
chr1 (29-77)||(23775803-23775851)
chr1 (32-92)||(27931039-27931099)
[»] scaffold0189 (1 HSPs)
scaffold0189 (1-92)||(11559-11650)
[»] chr4 (54 HSPs)
chr4 (1-92)||(13772096-13772187)
chr4 (1-92)||(28464578-28464669)
chr4 (1-92)||(54092550-54092641)
chr4 (23-92)||(30192910-30192979)
chr4 (1-92)||(37735125-37735216)
chr4 (23-92)||(46076602-46076670)
chr4 (1-92)||(4950206-4950297)
chr4 (1-92)||(25009769-25009860)
chr4 (1-92)||(26705305-26705396)
chr4 (1-92)||(49620953-49621044)
chr4 (1-92)||(53305944-53306035)
chr4 (23-92)||(6711503-6711572)
chr4 (7-92)||(7797331-7797416)
chr4 (7-92)||(35666224-35666309)
chr4 (23-92)||(50264653-50264722)
chr4 (1-92)||(35853831-35853923)
chr4 (1-92)||(17723133-17723224)
chr4 (1-92)||(20544620-20544711)
chr4 (29-92)||(37423530-37423593)
chr4 (1-89)||(721689-721778)
chr4 (1-92)||(8138593-8138684)
chr4 (29-92)||(16960613-16960676)
chr4 (1-92)||(19313617-19313708)
chr4 (1-92)||(47930831-47930922)
chr4 (21-92)||(48372687-48372758)
chr4 (30-92)||(36650875-36650937)
chr4 (6-92)||(51268036-51268121)
chr4 (1-89)||(755144-755233)
chr4 (1-92)||(51019923-51020012)
chr4 (1-68)||(55814696-55814764)
chr4 (1-92)||(4964169-4964259)
chr4 (29-92)||(9784995-9785058)
chr4 (1-92)||(10555966-10556057)
chr4 (1-92)||(21037569-21037660)
chr4 (1-92)||(32448652-32448743)
chr4 (1-92)||(33032541-33032632)
chr4 (1-92)||(33046832-33046923)
chr4 (1-92)||(37424159-37424250)
chr4 (32-92)||(16192061-16192121)
chr4 (1-68)||(18362429-18362497)
chr4 (1-68)||(36600429-36600497)
chr4 (1-68)||(42073755-42073823)
chr4 (1-92)||(7852099-7852190)
chr4 (1-92)||(17729893-17729984)
chr4 (1-92)||(23721761-23721852)
chr4 (1-92)||(26808653-26808744)
chr4 (1-92)||(29979315-29979405)
chr4 (1-92)||(38720328-38720419)
chr4 (1-92)||(49702755-49702846)
chr4 (1-92)||(55139722-55139813)
chr4 (34-92)||(7479746-7479804)
chr4 (23-68)||(50825031-50825076)
chr4 (32-92)||(36422327-36422387)
chr4 (32-92)||(55069115-55069175)
[»] chr3 (47 HSPs)
chr3 (1-92)||(13625521-13625612)
chr3 (1-92)||(18364904-18364995)
chr3 (1-92)||(27638861-27638952)
chr3 (1-92)||(32374119-32374210)
chr3 (1-92)||(48841734-48841825)
chr3 (1-92)||(1262670-1262761)
chr3 (1-92)||(11345073-11345164)
chr3 (1-92)||(47794364-47794455)
chr3 (1-92)||(49764871-49764962)
chr3 (23-92)||(10689061-10689130)
chr3 (1-92)||(1363764-1363855)
chr3 (1-92)||(3090130-3090221)
chr3 (1-92)||(16067498-16067589)
chr3 (1-92)||(33978884-33978975)
chr3 (1-92)||(49080231-49080322)
chr3 (4-89)||(27255564-27255650)
chr3 (1-92)||(41587024-41587116)
chr3 (1-92)||(11388674-11388765)
chr3 (17-92)||(25480799-25480874)
chr3 (1-92)||(27393471-27393562)
chr3 (5-92)||(30127868-30127955)
chr3 (1-92)||(44950583-44950674)
chr3 (1-92)||(53490412-53490503)
chr3 (1-92)||(6296456-6296547)
chr3 (1-92)||(28724007-28724098)
chr3 (1-92)||(30605058-30605149)
chr3 (1-68)||(11397296-11397363)
chr3 (33-92)||(33314403-33314462)
chr3 (1-76)||(40927876-40927951)
chr3 (1-92)||(54403834-54403925)
chr3 (1-76)||(22517345-22517422)
chr3 (17-68)||(33114862-33114914)
chr3 (4-92)||(45306637-45306725)
chr3 (1-92)||(8449527-8449618)
chr3 (29-92)||(11582278-11582341)
chr3 (29-92)||(17058206-17058269)
chr3 (1-44)||(17764701-17764744)
chr3 (1-44)||(19066021-19066064)
chr3 (1-92)||(27346404-27346495)
chr3 (1-92)||(27397122-27397213)
chr3 (1-92)||(41044493-41044584)
chr3 (1-90)||(7724842-7724928)
chr3 (1-92)||(291383-291475)
chr3 (1-68)||(14600652-14600720)
chr3 (29-73)||(19546647-19546691)
chr3 (4-92)||(20030292-20030380)
chr3 (32-92)||(45241444-45241504)
[»] scaffold0712 (1 HSPs)
scaffold0712 (1-92)||(4029-4120)
[»] scaffold0709 (1 HSPs)
scaffold0709 (1-92)||(4049-4140)
[»] scaffold0289 (1 HSPs)
scaffold0289 (6-92)||(3763-3849)
[»] chr6 (22 HSPs)
chr6 (1-92)||(34250419-34250510)
chr6 (1-92)||(2092049-2092140)
chr6 (1-92)||(21802316-21802407)
chr6 (1-92)||(24620258-24620349)
chr6 (23-92)||(14313462-14313531)
chr6 (1-92)||(33950598-33950688)
chr6 (1-89)||(7448500-7448588)
chr6 (29-92)||(33276024-33276085)
chr6 (17-92)||(15499223-15499298)
chr6 (1-92)||(31281957-31282048)
chr6 (1-92)||(31882223-31882314)
chr6 (34-92)||(2522941-2522999)
chr6 (2-91)||(4126268-4126357)
chr6 (4-92)||(32522107-32522195)
chr6 (1-92)||(2655205-2655296)
chr6 (7-90)||(17337212-17337295)
chr6 (1-92)||(30461712-30461803)
chr6 (30-92)||(13444123-13444185)
chr6 (2-91)||(4100905-4100994)
chr6 (1-92)||(14224202-14224293)
chr6 (21-92)||(32114139-32114210)
chr6 (47-92)||(13489737-13489782)
[»] scaffold0201 (2 HSPs)
scaffold0201 (1-91)||(15597-15687)
scaffold0201 (1-92)||(15070-15161)
[»] scaffold0695 (1 HSPs)
scaffold0695 (1-92)||(2492-2583)
[»] scaffold0159 (1 HSPs)
scaffold0159 (1-92)||(34653-34744)
[»] scaffold0051 (1 HSPs)
scaffold0051 (27-90)||(11375-11438)
[»] scaffold0971 (1 HSPs)
scaffold0971 (17-89)||(3374-3447)
[»] scaffold1192 (1 HSPs)
scaffold1192 (17-92)||(554-629)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-92)||(16860-16951)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-92)||(161528-161619)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-92)||(351540-351611)
[»] scaffold0533 (1 HSPs)
scaffold0533 (1-92)||(9756-9847)
[»] scaffold0068 (1 HSPs)
scaffold0068 (26-92)||(26082-26148)
[»] scaffold0340 (1 HSPs)
scaffold0340 (1-92)||(12463-12554)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-92)||(25488-25579)
[»] scaffold0034 (1 HSPs)
scaffold0034 (30-92)||(26150-26212)
[»] scaffold0115 (1 HSPs)
scaffold0115 (39-92)||(30977-31030)


Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18996888 - 18996668
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaattctatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18996888 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgacttttatactccaaattataacattaataataaaatatttaaattctatggtt 18996789  T
Q  101 tctgcagaggagaataattggctgacctcagttccttcgattgatgaggttaaggcagtagtgtttgatttgaatggggatggtgctcccgaacatgata 200  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18996788 tctgcagaggagaataatcgactgacctcagttccttcgattgatgaggttaaggcagtagtgtttgatttgaatggggatggtgctcccggacatgata 18996689  T
Q  201 tgtttggaggacatttctttc 221  Q
    |||||||||||||||||||||    
T  18996688 tgtttggaggacatttctttc 18996668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 11796525 - 11796613
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  11796525 tgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 11796613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38911048 - 38911139
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  38911048 atgtaaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 38911139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11564180 - 11564271
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || || ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| |||| |||||||||    
T  11564180 atgtgaaaaattactaaattcgattaagtatggttatttaaaagtgaattttatactccaaataataaaattaataacaaaagatttaaatt 11564271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14742866 - 14742775
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| || |||||||||||||||||| ||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  14742866 atgtgaaaaattactaaagtcgataaagtatggttatttaaaactgaattttatactctaaattataaaattaataacaaaatatttaaatt 14742775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 3045316 - 3045401
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||| |||||||||    
T  3045316 aaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaaaatttaaatt 3045401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 18468155 - 18468246
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||  ||||||||| ||||||||||| ||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  18468155 atgtgaaaaattactaaagttgattaagtattgttatttaaaattgaattttatactctaaattataaaattaataacaaaatatttaaatt 18468246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22606694 - 22606785
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| |  | ||| |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  22606694 atgtgaaaaattgctaacgtcgattaagtatgattatttaaaagtgaattttatactctaaattataaaattaataaaaaaatatttaaatt 22606785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 33476288 - 33476359
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| | ||||||||||||    
T  33476288 caattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacataatatttaaatt 33476359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34173425 - 34173516
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||  ||||||||||||||||||| || | |||||||||| ||||||||| |||||||| ||||||||||||||    
T  34173425 atgtgaaaaattactaaagtcggttaagtatggttatttaaaggttaattttatactctaaattataaaattaataacaaaatatttaaatt 34173516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37009372 - 37009462
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||||||| |||||||||||||| |||||||||  ||||||||| |||||||| ||||||||||||||    
T  37009372 atgtgaaaaattactaaagtcgattaagtatgattatttaaaagtgaattttatactttaaattataaaattaataa-aaaatatttaaatt 37009462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 13873703 - 13873788
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| ||||||||||||||||||||||||| |||||||||  ||||||||| |||||||| | ||||||||||||    
T  13873703 aaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactataaattataaaattaataacacaatatttaaatt 13873788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 14013828 - 14013913
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| ||||||||||||||||||||||||| |||||||||  ||||||||| |||||||| | ||||||||||||    
T  14013828 aaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactataaattataaaattaataacacaatatttaaatt 14013913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35658616 - 35658708
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  |||| ||||||||| || ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  35658616 atgtgaaaaataactaaagttaattaagtaatgcttatttaaatgtgaattttatactccaaattataaaattaataacaaaatatttaaatt 35658708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36451327 - 36451235
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaattc 93  Q
    ||||||||||||||  ||||| ||||| ||||||||||||||| ||| |||| ||||  ||||||||| |||||||| |||||||||||||||    
T  36451327 atgtgaaaaattactaaagtcgattaaatatggttatttaaaattgaattttgtactataaattataaaattaataacaaaatatttaaattc 36451235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31364257 - 31364348
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || |  ||||||||||||||||||||||| | |||||||||| ||||||||| |||||||| |||| |||||||||    
T  31364257 atgtgaaaaattactaaaattgattaagtatggttatttaaaagttaattttatactctaaattataaaattaataacaaaacatttaaatt 31364348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 37199327 - 37199402
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||| |||| |||||||||    
T  37199327 aagtcgattaagtatggttatttaaaagtgaattttagactctaaattataaaattaataacaaaagatttaaatt 37199402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 7939684 - 7939600
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| ||||||||||||||||||||||| | |||||||||| ||||||||| |||||||| |||| |||||||||    
T  7939684 aaaattactaaagtcgattaagtatggttatttaaaagt-aattttatactctaaattataaaattaataacaaaagatttaaatt 7939600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 32875508 - 32875428
Alignment:
Q  2 tgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaa 82  Q
    |||||||||| ||  ||||| || |||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||    
T  32875508 tgtgaaaaataactaaagtcgataaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaa 32875428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3515183 - 3515274
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| || ||||||||||||||||| | |||||||||| ||||| ||| |||||||  ||||||||||||||    
T  3515183 atgtgaaaaattactcaagacaataaaatatggttatttaaaagttaattttatactctaaattctaaaattaatagaaaaatatttaaatt 3515274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5790371 - 5790280
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||  |||| || ||||||||||||||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  5790371 atgtgaaaaattactaaaaacaataaaatatggttatttaaaagttaattttatactctaaattataaaattaatagcaaaatatttaaatt 5790280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 6229595 - 6229686
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||  |||||||||||||||||||||| || |||| ||||| ||||||||| ||||||   ||||||||||||||    
T  6229595 atgtgaaaaattactaaagttgattaagtatggttatttaaaagcgaattttgtactctaaattataaaattaattgcaaaatatttaaatt 6229686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14736492 - 14736402
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| || |||||||||||||||||||||| ||||||  || ||||||||| |||||||| ||||| ||||||||    
T  14736492 atgtgaaaaattactaaagtcgataaagtatggttatttaaaagtgaattttattatctaaattataaaattaataacaaaat-tttaaatt 14736402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33146396 - 33146306
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| |||| ||||   |||||||| |||||| | ||||||||||||||    
T  33146396 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttgtact-gtaattataaaattaattacaaaatatttaaatt 33146306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 40769088 - 40769173
Alignment:
Q  6 aaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||  ||||| |||||||||||||||||||||||||  ||||| ||| ||||||||| |||||||| |||| |||||||||    
T  40769088 aaaaattacaaaagtcgattaagtatggttatttaaaagtga-atttatgctctaaattataaaattaataacaaaagatttaaatt 40769173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8727075 - 8727167
Alignment:
Q  1 atgtgaaaaattacgtaa-gtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || | |||| |||||||||||||||||||| |  ||||||||| ||||||||| |||||||  ||||||||||||||    
T  8727075 atgtgaaaaattactaaaagacaataaagtatggttatttaaaagtaaaatttatactcaaaattataaaattaatagcaaaatatttaaatt 8727167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31709427 - 31709338
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||| | ||||  || ||||||| |||||||||||||| |||||||||| ||||||||  | |||||| ||||||||||||||    
T  31709427 atgtgaaaaattatgaaagttgataaagtatgattatttaaaagtgaattttatactctaaattata--aataataacaaaatatttaaatt 31709338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 34831109 - 34831021
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  ||| |||| |||||||||||||||||||| | |||| || || ||||||||| |||||||| |||||||| |||||    
T  34831109 tgaaaaattactaaagacaataaagtatggttatttaaaagttaattttttattctaaattataaaattaataagaaaatattcaaatt 34831021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10356825 - 10356734
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||| |||| ||| ||||||  |||||||| | |||||||||| ||||||||| ||||||| |||||||||||||||    
T  10356825 atgtaaaaaattactaaagacaataaagaatggttgcttaaaagttaattttatactctaaattataaaattaatagtaaaatatttaaatt 10356734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15006807 - 15006898
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||  |||| |||| ||||||||||| || |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  15006807 atgtgaaaaattactaaagtcggttaaatatgattatttaaaagcgaattttgtactctaaattataaaattaattacaaaatatttaaatt 15006898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 24758512 - 24758583
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||| ||||||||||| | | |||||||||| ||||||||| |||||||| ||||||||||||||    
T  24758512 caataaagtatagttatttaaaatttaattttatactctaaattataaaattaataacaaaatatttaaatt 24758583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11564797 - 11564889
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  || ||||||||||| || ||||||||| |||| |||||||||| |||||| || |||||||  ||||||||||||||    
T  11564797 atgtgaaaaataactaaattcaattaagtaatgcttatttaaatgtgaattttatactctaaattacaaaattaatagcaaaatatttaaatt 11564889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 28167903 - 28167815
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  ||| |||| ||| |||||||||||||||| | |||||||||| ||||||||| ||  |||  ||||||||||||||    
T  28167903 tgaaaaattactaaagacaataaagaatggttatttaaaagttaattttatactctaaattataaaatctatagaaaaatatttaaatt 28167815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 34580641 - 34580573
Alignment:
Q  24 ttaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||| |||||| ||| |||||||||| |||| |||| ||||| || ||||||||||||||    
T  34580641 ttaagtatggttaattaaaaatgaattttatactctaaataataaaattaacaacaaaatatttaaatt 34580573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 314786 - 314711
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| || |||||||||||| ||||||||| ||||||| || ||||||||| ||  || ||||||||||||||||    
T  314786 aagtcgataaagtatggttatctaaaagtgaattttatattctaaattataaaatccatgataaaatatttaaatt 314711  T

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Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 6077554 - 6077491
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||| | |||||||||  ||||||||| |||||||  ||||||||||||||    
T  6077554 tatggttatttaaaagttaattttatactataaattataaaattaatagaaaaatatttaaatt 6077491  T

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Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12413620 - 12413711
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  |||||||||||||||| |  ||||||||| ||||||||| ||  |||| ||||||||||||||    
T  12413620 atgtgaaaaattactaaagacaataaaacatggttatttaaaagttaactttatactctaaattataaaatctataacaaaatatttaaatt 12413711  T

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Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12425680 - 12425771
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  |||||||||||||||| |  ||||||||| ||||||||| ||  |||| ||||||||||||||    
T  12425680 atgtgaaaaattactaaagacaataaaacatggttatttaaaagttaactttatactctaaattataaaatctataacaaaatatttaaatt 12425771  T

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Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 16599917 - 16599968
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  16599917 aagtcgattaagtatggctatttaaaagtgaattttaaactccaaattataa 16599968  T

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Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 33886670 - 33886741
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||||||||||||| | |||||||||| ||| ||||| |||||||  ||||||| ||||||    
T  33886670 caataaagtatggttatttaaaagttaattttatactctaaaatataaaattaatagcaaaatatataaatt 33886741  T

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Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37330062 - 37329971
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| ||||||||||||||||   |||||||||| ||||||| | || ||||  ||||||||||||||    
T  37330062 atgtgaaaaattactaaagacaataaagcatggttatttaaaagtttattttatactctaaattattaaatcaatagcaaaatatttaaatt 37329971  T

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Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41077856 - 41077765
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| | | |||||||||||||| | | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  41077856 atgtgaaaaattacaaaagacaataatgcatggttatttaaaatttaattttatactctaaattataaaatcaatagaaaaatatttaaatt 41077765  T

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Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 41521337 - 41521274
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||| | |||||||||| ||||||||| ||| |||  ||||||||||||||    
T  41521337 tatggttatttaaaagttaattttatactctaaattataaaattgatagcaaaatatttaaatt 41521274  T

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Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5113984 - 5114076
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattat-aacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||||||||||||||||| || | |||||||||  ||||||| || || |||| |||||| ||||||||    
T  5113984 atgtgaaaaattaccaaagacaataaagtatggttatttaaaggttaattttatactataaattataaaaatcaatagtaaaatgtttaaatt 5114076  T

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Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6077736 - 6077680
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatact 57  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| | |||||||||    
T  6077736 atgtgaaaaattactaaagacaataaagtatggttatttaaaagttaattttatact 6077680  T

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Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17829429 - 17829521
Alignment:
Q  1 atgtgaaaaatt-acgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| ||  ||| |||| || ||||||||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  17829429 atgtgaaaaatttactaaagacaataaaatatggttatttaaaagttaattttatactctaaattatcaaatcaatagcaaaatatttaaatt 17829521  T

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Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 40020430 - 40020369
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||| |||||||||| ||||| ||  | |||||| ||||||||||||||    
T  40020430 tatggttatttaaaagtgaattttatactctaaatttta--aataataacaaaatatttaaatt 40020369  T

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Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11942378 - 11942287
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  |||  ||| ||| ||| |||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  11942378 atgtaaaaaattactaaagataataaagcatgtttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 11942287  T

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Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 36143550 - 36143488
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaat 91  Q
    |||||||||||||||||   | |||||||| ||||||||| |||||||| |||||| ||||||    
T  36143550 tatggttatttaaaagttcatattatactctaaattataaaattaataacaaaataattaaat 36143488  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32878967 - 32879011
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagt 45  Q
    ||||||||||||||  ||| |||| ||||||||||||||||||||    
T  32878967 atgtgaaaaattactaaagacaataaagtatggttatttaaaagt 32879011  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 35050061 - 35050125
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaat-aataaaatatttaaatt 92  Q
    |||||||||||||||||||  ||||||||| ||  ||||| |||||| || ||||||||||||||    
T  35050061 tatggttatttaaaagtgaactttatactctaatctataaaattaataaaaaaaatatttaaatt 35050125  T

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Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8438101 - 8438010
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  8438101 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatgctccaaattataacattaataataaaatatttaaatt 8438010  T

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Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 8573064 - 8573151
Alignment:
Q  5 gaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  8573064 gaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 8573151  T

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Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18337897 - 18337984
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatattta 88  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||    
T  18337897 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatattta 18337984  T

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Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35751894 - 35751984
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  35751894 atgtgaaaaattaa-taagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 35751984  T

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Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19408917 - 19409008
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||||| |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  19408917 atgtaaaaaattactaaagtcgattaagtatgattatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 19409008  T

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Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20183744 - 20183835
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||||||||||||||||||||| |||| | ||||||| || ||||||||| |||||||| ||||||||||||||    
T  20183744 atgtgaaaaattactaaagtcaattaagtatggttatttagaagtaaattttatattctaaattataaaattaataacaaaatatttaaatt 20183835  T

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Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22730770 - 22730862
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   |||||||||||||| || ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  22730770 atgtgaaaaattagtgaagtcaattaagtaatgattatttaaatgtgaattttatactccaaattataaaattaataacaaaatatttaaatt 22730862  T

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Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 36737160 - 36737248
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  ||||| ||||||||||||||||||||||||| ||||||| || ||||||||| |||||||| |||||| |||||||    
T  36737160 tgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatattctaaattataaaattaataacaaaataattaaatt 36737248  T

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Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13686332 - 13686241
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| || |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  13686332 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagcgaattttgtactctaaattataaaattaattacaaaatatttaaatt 13686241  T

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Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17780711 - 17780620
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  ||||| ||||||||||||||||| ||||| | |||||||||| ||||||||| |||||||| ||||||||||||||    
T  17780711 atgtgaaaaatgactaaagtcgattaagtatggttatttcaaagttaattttatactctaaattataaaattaataacaaaatatttaaatt 17780620  T

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Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27302237 - 27302327
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||| ||||| || || ||||||||||| ||||||| |||||||||| ||||||||| | |||||||||||||||||||||    
T  27302237 atgtgaaaaattacgaaagtcgataaaatatggttattttaaagtgaattttatactctaaattataa-aataataataaaatatttaaatt 27302327  T

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Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 15144795 - 15144881
Alignment:
Q  6 aaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||  | ||| ||||||||||||||||||||||||| |||||||||  ||||||||| |||||||| ||||||||||||||    
T  15144795 aaaaattactaaggtcgattaagtatggttatttaaaagtgaattttatactttaaattataaaattaataacaaaatatttaaatt 15144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 10666332 - 10666247
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||| | || ||||||||||||||||| | ||||||| || ||||||||| |||||||| ||||||||||||||    
T  10666332 aaaattacgtaagtcattaaaatatggttatttaaaagttaattttatattctaaattataaaattaataagaaaatatttaaatt 10666247  T

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Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 38955298 - 38955363
Alignment:
Q  27 agtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  38955298 agtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 38955363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5138676 - 5138767
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  ||||  ||||||||||||||||||||||||| | |||||||  ||||||||| |||||||| ||||||||||||||    
T  5138676 atgtgaaaaactactaaagttgattaagtatggttatttaaaagtgaatattatactttaaattataaaattaataacaaaatatttaaatt 5138767  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 6029955 - 6029886
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| ||| |||| |||| |||||||||    
T  6029955 attaagtatggttatttaaaagtgaattttatactctaaattataaaattgataacaaaagatttaaatt 6029886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12585969 - 12585880
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||| | ||||| || || ||||||||||||||||||| |||||||||| ||||||||  | |||||| ||||||||||||||    
T  12585969 atgtgaaaaattatgaaagtccataaattatggttatttaaaagtgaattttatactctaaattata--aataataacaaaatatttaaatt 12585880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4877073 - 4876982
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||| ||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  4877073 atgtgaaaaattactaaagacaataaagcatggttatttgaaagttaattttatactctaaattataaaattaatagcaaaatatttaaatt 4876982  T

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Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9018025 - 9018116
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  ||||| ||||||| |||||||| |||| ||| |||||||||| ||||||||| |||||||| | ||||||||||||    
T  9018025 atgtgaaaaagtactaaagtcgattaagtgtggttattcaaaaatgaattttatactctaaattataaaattaataacacaatatttaaatt 9018116  T

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Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14594437 - 14594346
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || |  ||||||||||||||||||||||| | |||||||||| ||||||||| | |||||| |||| |||||||||    
T  14594437 atgtgaaaaattactaaaattgattaagtatggttatttaaaagttaattttatactctaaattataaaactaataaaaaaacatttaaatt 14594346  T

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Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21639398 - 21639489
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   || || |||||||||||||||||||||| || |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  21639398 atgtgaaaaattattaaattcgattaagtatggttatttaaaagcgaattttgtactctaaattataaaattaattacaaaatatttaaatt 21639489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30783091 - 30783182
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||||||||||||||||||   | |||||||||  ||||||||| |||||||| ||||||||||||||    
T  30783091 atgtgaaaaattactaaagacaataaagtatggttatttaaaaaataattttatactataaattataaaattaataacaaaatatttaaatt 30783182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42598678 - 42598587
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||||| |||||||||||||| | |||||||||| ||| ||||| |||||||  ||||||||||||||    
T  42598678 atgtgaaaaattactaaagacaataaagtacggttatttaaaagttaattttatactctaaaatataaaattaatagcaaaatatttaaatt 42598587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 18524065 - 18523999
Alignment:
Q  26 aagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||||||| | |||||||||  ||||||||| |||||||| ||||||||||||||    
T  18524065 aagtatggttatttaaaagttaattttatactataaattataaaattaataacaaaatatttaaatt 18523999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 34951564 - 34951508
Alignment:
Q  36 atttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||    
T  34951564 atttaaaagtgaattttatattctaaattataaaattaataataaaatatttaaatt 34951508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 141146 - 141229
Alignment:
Q  6 aaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    |||||||||  || |||||||  |||| ||| |||||||||| ||||||||||||||| |||| |||||||| |||||||||||    
T  141146 aaaaattactaaaatcaattacatatgtttacttaaaagtgaattttatactccaaatcataaaattaataacaaaatatttaa 141229  T

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Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 1405967 - 1406038
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| ||||||||||  |||||||| | |||||||||| ||||||||| ||||||| |||||||||||||||    
T  1405967 caataaagtatggttgcttaaaagttaattttatactctaaattataaaattaatagtaaaatatttaaatt 1406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20570523 - 20570432
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  || || |||||||||||||||  |||||||| |||||||||| ||||||||| |||||||| | || |||||||||    
T  20570523 atgtgaaaaagtactaaaatcgattaagtatggttatggaaaagtgaattttatactctaaattataaaattaataacacaaaatttaaatt 20570432  T

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Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35751343 - 35751252
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||| |||| |||||||||||||||||| | | |||||||||  ||||||||| |||||||  ||||||||||||||    
T  35751343 atgtaaaaaattactaaagacaataaagtatggttatttaaaatttaattttatactataaattataaaattaatagcaaaatatttaaatt 35751252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 32348215 - 32348281
Alignment:
Q  26 aagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||||||| | |||||||||| ||||||||| | |||||  ||||||||||||||    
T  32348215 aagtatggttatttaaaagttaattttatactctaaattataaaactaatagaaaaatatttaaatt 32348281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 1931678 - 1931749
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| ||||||| |||||||||||| | |||||||||  ||||||||| |||||||  ||||||||||||||    
T  1931678 caataaagtatgattatttaaaagttaattttatactataaattataaaattaatagcaaaatatttaaatt 1931749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3933688 - 3933778
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||| | | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  3933688 atgtggaaaattac-taagacaataaagcatggttatttaaaatttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 3933778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20540682 - 20540773
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || ||| | ||| ||| |||||||||||| | |||||||||| || |||||| |||||||| || |||||||||||    
T  20540682 atgtgaaaaattactaaaatcattaaagcatgattatttaaaagttaattttatactctaatttataaaattaataacaatatatttaaatt 20540773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 2553930 - 2553860
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaa 74  Q
    |||||||||||  ||||| ||||| ||||||||||||| || || ||||||||| |||||||||| |||||    
T  2553930 tgaaaaattactaaagtcgattaattatggttatttaatagagaattttatacttcaaattataaaattaa 2553860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 21687762 - 21687828
Alignment:
Q  26 aagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||   |||||||||| ||||||||| | |||||  ||||||||||||||    
T  21687762 aagtatggttatttaaaagtttattttatactctaaattataaaagtaatagcaaaatatttaaatt 21687828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 17968197 - 17968286
Alignment:
Q  3 gtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||  ||| |||| ||  |||||||||||||||| | ||||||| || ||||||||| || ||||  ||||||||||||||    
T  17968197 gtgaaaaattactaaagacaataaaacatggttatttaaaagttaattttataatctaaattataaaatcaatagcaaaatatttaaatt 17968286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10687952 - 10687860
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgattttt-atactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| || | ||||||| |||||||||||| | |||| |||||| ||||||||| |||||||   |||||||||||||    
T  10687952 atgtgaaaaattactaaagacagtaaagtatgtttatttaaaagttaattttgatactctaaattataaaattaatagcgaaatatttaaatt 10687860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36742482 - 36742394
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    ||||||||||||||  ||| |||| ||| ||| |||||||||||| | |||||||||| ||||||| | || ||||  |||||||||||    
T  36742482 atgtgaaaaattactaaagacaataaagcatgattatttaaaagttaattttatactctaaattatcaaatcaatatcaaaatatttaa 36742394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 10402314 - 10402385
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||||||||||| ||| ||  |||||  ||||||||| |||||||  ||||||||||||||    
T  10402314 caataaagtatggttatttaaaattgaattccatactataaattataaaattaatagaaaaatatttaaatt 10402385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27979594 - 27979504
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||  ||| ||| |||||||||||||||| | ||||| |||| ||||||||| || ||||  ||||||||||||||    
T  27979594 atgtgaaaaattactaaagataataaagcatggttatttaaaagttaatttta-actctaaattataaaatcaatagcaaaatatttaaatt 27979504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 6123663 - 6123727
Alignment:
Q  26 aagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||| ||||||||||| ||| |||| ||||| ||||||||| || ||||||||||||||||||||    
T  6123663 aagtatagttatttaaaaatgaatttt-tactctaaattataaaat-aataataaaatatttaaatt 6123727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 6136128 - 6136200
Alignment:
Q  18 agtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||| |||||| ||||||||||| ||| |||| ||||| |||||| || || ||||||||||||||||||||    
T  6136128 agtcaatgaagtatagttatttaaaaatgaatttt-tactctaaattacaaaat-aataataaaatatttaaatt 6136200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32458206 - 32458133
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaa 74  Q
    |||||||||| |||  ||||| ||||| |||||||||||||| |||| |||| ||||| ||| ||||| |||||    
T  32458206 atgtgaaaaactactaaagtcgattaaatatggttatttaaatgtgaattttgtactcaaaaatataaaattaa 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 40957080 - 40957020
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||| | |||||||||| ||||||||| || ||||  |||||||| |||||    
T  40957080 ggttatttaaaagttaattttatactctaaattataaaatcaatagaaaaatattaaaatt 40957020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 14435 - 14523
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||    
T  14435 tgaaaaattactaaagtcaattaagtatggttatttaaaagtgaattttatacttcaaattataaaattaataacaaaatatttaaatt 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 421625 - 421557
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||||| ||  |||||||||||||| || ||||||||| |||| ||||||||||||||||||||    
T  421625 atgtgaaaaataactaaagtcaattaagtaatgcttatttaaatgtgaattttatactccaaattataa 421557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 16425722 - 16425810
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||    
T  16425722 tgaaaaattactaaagtcaattaagtatggttatttaaaagtgaattttatacttcaaattataaaattaataacaaaatatttaaatt 16425810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29103904 - 29103995
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  29103904 atgtgaaaaattaccaaagtcgattaagtatgattatttaaaagtgaattttatactccaaattataaaattaataacaaaatatttaaatt 29103995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19332763 - 19332854
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| |||||| || |||||||| ||||||||||||||    
T  19332763 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattaaaaaattaataacaaaatatttaaatt 19332854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38988115 - 38988024
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||| ||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  38988115 atgtgaaaaattactaaagtcgattaagtatggttatttgaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 38988024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 36848215 - 36848300
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||    
T  36848215 aaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataataaaagatttaaatt 36848300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8122988 - 8123079
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||  ||| |||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  8122988 atgtgaaaaattactaaagtcgcttacgtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 8123079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 42811398 - 42811311
Alignment:
Q  5 gaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||  ||||| ||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  42811398 gaaaaattactaaagtcgattaaatatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 42811311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 11640251 - 11640163
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  |||||  |||| ||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  11640251 tgaaaaattactaaagtcggttaaatatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 11640163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48872373 - 48872285
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    ||||||||||||||  ||||| || |||||||||||| ||||||||| |||||||||| ||||||||| |||||||| |||||||||||    
T  48872373 atgtgaaaaattactaaagtcgatgaagtatggttatataaaagtgaattttatactctaaattataaaattaataacaaaatatttaa 48872285  T

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Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13068118 - 13068209
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| |||| ||||| | ||||||| |||||| | ||||||||||||||    
T  13068118 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttgtactctatattataaaattaattacaaaatatttaaatt 13068209  T

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Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31221173 - 31221263
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||   | |||||||||||||||||||||||||||| | | |||||||||||||||| |||||||| ||||||||||||||    
T  31221173 atgtgaaaaattactacaatcaattaagtatggttatttaaaagtgaatataatactccaaattataa-attaataacaaaatatttaaatt 31221263  T

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Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 43450508 - 43450575
Alignment:
Q  25 taagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  43450508 taagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 43450575  T

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Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 10410425 - 10410359
Alignment:
Q  26 aagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  10410425 aagtatggtcatttaaaagtgaattttatactccaaattataaaattaataacaaaatatttaaatt 10410359  T

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Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38790430 - 38790341
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    ||||||||||| ||  |||||||||||||| || ||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||    
T  38790430 atgtgaaaaataactaaagtcaattaagtaatgcttatttaaatgtgaattttatactccaaattataaaattaataacaaaatatttaa 38790341  T

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Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13904128 - 13904037
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||  ||| ||||||||||    
T  13904128 atgtgaaaaattactaaagtagattaagtatggttatttaaaactgaattttatactctaaattataatattaatagcaaagtatttaaatt 13904037  T

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Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22711997 - 22711906
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||  ||||||||||||||||||||||||| |||||||||| ||||| ||| | |||||| |||| |||||||||    
T  22711997 atgtgaaaaattactaaagttgattaagtatggttatttaaaagtgaattttatactctaaattgtaaaaataataacaaaaaatttaaatt 22711906  T

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Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23226700 - 23226609
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| | |||||||||  ||||||||| |||||||  ||||||||||||||    
T  23226700 atgtgaaaaattactaaaggcaataaagtatggttatttaaaagttaattttatactttaaattataaaattaatagcaaaatatttaaatt 23226609  T

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Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23233227 - 23233136
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| | |||||||||  ||||||||| |||||||  ||||||||||||||    
T  23233227 atgtgaaaaattactaaaggcaataaagtatggttatttaaaagttaattttatactttaaattataaaattaatagcaaaatatttaaatt 23233136  T

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Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23235853 - 23235762
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| | |||||||||  ||||||||| |||||||  ||||||||||||||    
T  23235853 atgtgaaaaattactaaaggcaataaagtatggttatttaaaagttaattttatactttaaattataaaattaatagcaaaatatttaaatt 23235762  T

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Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23242888 - 23242797
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| | |||||||||  ||||||||| |||||||  ||||||||||||||    
T  23242888 atgtgaaaaattactaaaggcaataaagtatggttatttaaaagttaattttatactttaaattataaaattaatagcaaaatatttaaatt 23242797  T

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Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 46010830 - 46010921
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||  || |||||||||||||||||||||| |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  46010830 atgtgaaaaattactaaagtagatcaagtatggttatttaaaagtgaattttgtactctaaattataaaattaattaaaaaatatttaaatt 46010921  T

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Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 48982236 - 48982146
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||   |||||||| ||||||| | |||||||| ||||||||||||||    
T  48982236 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtga-agttatactctaaattatcatattaataacaaaatatttaaatt 48982146  T

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Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32387841 - 32387752
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||| | ||||| || | |||||||||||||||||||| |||||||||| ||||||||  | |||||| ||||||||||||||    
T  32387841 atgtgaaaaattatgaaagtcgataatgtatggttatttaaaagtgaattttatactctaaattata--aataataacaaaatatttaaatt 32387752  T

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Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 12679328 - 12679241
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaat 91  Q
    |||||||||||  ||||| || || | ||||||||||||||||| ||||||| || ||||||| | ||||||||||||||||||||||    
T  12679328 tgaaaaattaccaaagtcgataaaatgtggttatttaaaagtgaattttatattctaaattatgaaattaataataaaatatttaaat 12679241  T

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Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36687677 - 36687744
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||||||||  || || ||||||||||||||||||||||||| |||||||||| |||||||||    
T  36687677 atgtgaaaaattactaaattcgattaagtatggttatttaaaagtgaattttatactctaaattataa 36687744  T

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Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 11696551 - 11696482
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||  | || ||||| ||||||||| |||||||| ||||||||||||||    
T  11696551 attaagtatggttatttaaaagtggatattttactcaaaattataaaattaataacaaaatatttaaatt 11696482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 43133714 - 43133775
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaattc 93  Q
    |||||||||||||||||||||||  || ||||||||| |||||||| |||||||||||||||    
T  43133714 ggttatttaaaagtgatttttattgtctaaattataaaattaataacaaaatatttaaattc 43133775  T

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Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 19434971 - 19434895
Alignment:
Q  17 aagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| | || ||||||||| |||| |||||||||||||||||||| |||||||  ||||||||||||||    
T  19434971 aagtcaattaagcaatgtttatttaaatgtgaattttatactccaaattataaaattaatatcaaaatatttaaatt 19434895  T

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Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2790634 - 2790543
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||   || |||| ||| |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  2790634 atgtgaaaaattactacagacaataaagcatggttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 2790543  T

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Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29615910 - 29615819
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||  ||| ||| |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  29615910 atgtgaaaaattactaaagataataaagcatggttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 29615819  T

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Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 12677404 - 12677347
Alignment:
Q  34 ttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaat 91  Q
    |||||||||||||| ||||||| || ||||||| | ||||||||||||||||||||||    
T  12677404 ttatttaaaagtgaattttatattctaaattatgaaattaataataaaatatttaaat 12677347  T

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Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 40401897 - 40401828
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| ||||||||||||||| |||| ||||| ||||||||| ||| || | ||||||||||||||    
T  40401897 attaagtatagttatttaaaagtgaattttgtactctaaattataaaattgattacaaaatatttaaatt 40401828  T

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Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3341156 - 3341246
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||| |||| || ||||||||||||||| | | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  3341156 atgtaaaaaattactaaagacaataaaatatggttatttaaaatttaattttatactctaaattataa-attaatagcaaaatatttaaatt 3341246  T

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Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33869637 - 33869728
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||  |||| ||| |||||||||||||||| | || ||||||| ||||||||| || ||||  ||||||||||||||    
T  33869637 atgtgaaaaattactaaaaacaataaagcatggttatttaaaagttaattctatactctaaattataaaatcaatagcaaaatatttaaatt 33869728  T

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Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40189337 - 40189428
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||||||||||  |||||||| | |||||||||| ||||||||  ||||| || | ||||||||||||    
T  40189337 atgtgaaaaattactaaagacaataaagtatggtttcttaaaagttaattttatactctaaattatacaattaacaacataatatttaaatt 40189428  T

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Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 1573498 - 1573554
Alignment:
Q  33 gttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    ||||||||||||| | |||||||||| ||||||||| || ||||| |||||||||||    
T  1573498 gttatttaaaagttaattttatactctaaattataaaatcaataacaaaatatttaa 1573554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 46208509 - 46208457
Alignment:
Q  40 aaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||| | |||||||||| ||||||||| ||||||| |||||||||||||||    
T  46208509 aaaagttaattttatactctaaattataaaattaatagtaaaatatttaaatt 46208457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5228338 - 5228247
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| ||||  ||| |||| ||  |||||||||||||||| | |||||||||| ||| ||||| || ||||  ||||||||||||||    
T  5228338 atgtgaaaagttactaaagacaataaaacatggttatttaaaagttagttttatactctaaaatataaaatcaatagaaaaatatttaaatt 5228247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 8379552 - 8379465
Alignment:
Q  3 gtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaa 90  Q
    ||||||||||||  ||||| || || |||| | |||||||||| | ||||||||   ||||||||| |||||||| ||||||||||||    
T  8379552 gtgaaaaattactaaagtcgataaaatatgataatttaaaagtaaattttatacaataaattataaaattaataaaaaaatatttaaa 8379465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 34835166 - 34835079
Alignment:
Q  5 gaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||  ||| |||| |||||| ||||||||||| | | || ||||||| | ||||||| |||||||  ||||||||||||||    
T  34835166 gaaaaattactaaagacaataaagtattgttatttaaaatttaattgtatactctatattataaaattaatagaaaaatatttaaatt 34835079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38670373 - 38670282
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || ||| | ||| ||| |||||||||||| | |||||||||| || |||||| || ||||| || |||||||||||    
T  38670373 atgtgaaaaattactaaaatcattaaagcatgattatttaaaagttaattttatactctaatttataaaatcaataacaatatatttaaatt 38670282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 28442074 - 28442016
Alignment:
Q  34 ttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||| |||||| ||||||||   ||||||||| |||||||| ||||||||||||||    
T  28442074 ttatttataagtgaattttataccataaattataaaattaataaaaaaatatttaaatt 28442016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 36889751 - 36889685
Alignment:
Q  26 aagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||||| | | |||||||||| ||| ||||| |||||||  || |||||||||||    
T  36889751 aagtatggttatttaaaatttaattttatactctaaaatataaaattaatagcaacatatttaaatt 36889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 5952053 - 5952113
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||| | ||| |||||  ||||||||| |||||||  ||||||||||||||    
T  5952053 ggttatttaaaagttaatttcatactataaattataaaattaatagcaaaatatttaaatt 5952113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31872841 - 31872909
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||||| ||  ||||| |||||||| || ||||||||| |||| | ||||||||||||||||||    
T  31872841 atgtgaaaaataactaaagtcgattaagtaatgtttatttaaatgtgaatattatactccaaattataa 31872909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33576402 - 33576494
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacat-taataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| | || ||| |||||||||||||||| | ||||||| || ||||||||| ||  ||||  ||||||||||||||    
T  33576402 atgtgaaaaattactaaagactataaagcatggttatttaaaagttaattttatattctaaattataaaatcaaatagaaaaatatttaaatt 33576494  T

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Target: scaffold0368 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10970 - 11061
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||||||| ||||||||||||||    
T  10970 atgtgaaaaattactaaagtcaattaagtatggttatttaaaagtaaattttatactctaaattataaaattaataacaaaatatttaaatt 11061  T

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Target: scaffold0102 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26714 - 26623
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  26714 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 26623  T

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Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4256940 - 4257031
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||    
T  4256940 atgtgaaaaattacttaattcgattaagtatggttatttaaaagtgaattttatactccaaattataaaattaataacaaaatctttaaatt 4257031  T

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Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 34364275 - 34364190
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  34364275 aaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 34364190  T

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Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17565031 - 17564940
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| |  ||||| ||||||||||||||||||||||||| |||||||||  ||||||||| |||||||| ||||||||||||||    
T  17565031 atgtgaaaaatttctaaagtcgattaagtatggttatttaaaagtgaattttatactttaaattataaaattaataacaaaatatttaaatt 17564940  T

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Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11759778 - 11759871
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtat--ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||||| |||||||||| | ||||||| |||||||| ||||||||||||||    
T  11759778 atgtgaaaaattactaaagtcaattaagtatatggttatttaaaagtgaattttatactctatattataaaattaataacaaaatatttaaatt 11759871  T

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Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 32903944 - 32903869
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| ||||||||||||||||||||||||| |||||||||| ||||||||  |||||||| ||||||||||||||    
T  32903944 aagtcgattaagtatggttatttaaaagtgaattttatactctaaattatacaattaataacaaaatatttaaatt 32903869  T

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Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40299299 - 40299390
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| |  ||||| ||||||||||||||||||||||||| |||| ||||| | ||||||| |||||||| ||||||||||||||    
T  40299299 atgtgaaaaattcctaaagtcgattaagtatggttatttaaaagtgaattttgtactctacattataaaattaataacaaaatatttaaatt 40299390  T

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Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42166385 - 42166294
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||||||||||||||||||||| |||| || |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  42166385 atgtgaaaaattactaaagtcaattaagtatggttatttgaaagcgaattttgtactctaaattataaaattaattagaaaatatttaaatt 42166294  T

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Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 14879862 - 14879793
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||| |||||||||    
T  14879862 attaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaagatttaaatt 14879793  T

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Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34678908 - 34678823
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatt 86  Q
    ||||||||||||||  ||||| | ||||||| ||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||    
T  34678908 atgtgaaaaattactaaagtcgactaagtatagttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatt 34678823  T

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Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13439832 - 13439741
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || || ||||||||| ||||||||||||||| |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  13439832 atgtgaaaaattactaaaatcgattaagtatagttatttaaaagtgaattttgtactctaaattataaaattaattacaaaatatttaaatt 13439741  T

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Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17496625 - 17496534
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||| || |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  17496625 atgtgaaaaattactaaagtcgattaactatggttatttaaaagcgaattttgtactctaaattataaaattaattacaaaatatttaaatt 17496534  T

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Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 24778388 - 24778463
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| ||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||  ||||||||||||||    
T  24778388 aagtcgattaagtatggttatttaaaagtgaatttcatactctaaattataaaattaatagcaaaatatttaaatt 24778463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37265856 - 37265947
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||  | |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  37265856 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagcaaattttgtactctaaattataaaattaattaaaaaatatttaaatt 37265947  T

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Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 8443043 - 8443128
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  |||||||||||| ||| |||||||||||| | |||||||||| ||||||||| |||||||| |||| |||||||||    
T  8443043 aaaattactaaagtcaattaagcatgattatttaaaagtaaattttatactctaaattataaaattaataacaaaagatttaaatt 8443128  T

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Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14093863 - 14093954
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  ||  |||| |||||||||||||||||||| | |||||||||| ||| ||||| |||||||| ||||||||||||||    
T  14093863 atgtgaaaaataactaaatacaataaagtatggttatttaaaagttaattttatactctaaaatataaaattaataacaaaatatttaaatt 14093954  T

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Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37872579 - 37872670
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  37872579 atgtgaaaaattactaaagacaataaagcatggttatttaaaagttaattttatactctaaattataaaatcaatatcaaaatatttaaatt 37872670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 39998749 - 39998840
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||  | |||| ||||| ||||||||| |||||| | ||||||||| ||||    
T  39998749 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagcaaattttgtactctaaattataaaattaattacaaaatatttcaatt 39998840  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 40791453 - 40791362
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  40791453 atgtgaaaaattactaaagacaatgaagcatggttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 40791362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 8438284 - 8438370
Alignment:
Q  6 aaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||  ||| |||| ||||||||||  |||||||| | |||||||||| ||||||||| ||||||| |||||||||||||||    
T  8438284 aaaaattactaaagacaataaagtatggttgcttaaaagttaattttatactctaaattataaaattaatagtaaaatatttaaatt 8438370  T

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Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 29621531 - 29621466
Alignment:
Q  27 agtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||| || |||| || ||||||||| |||||||| ||||||||||||||    
T  29621531 agtatggttatttaaaagtgaattctatattctaaattataaaattaataacaaaatatttaaatt 29621466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17734624 - 17734715
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||| | ||||||| || ||||||||| || ||||  ||||||||||||||    
T  17734624 atgtgaaaaattactaaagacaataaagcatggttatttaaaagttaattttatattctaaattataaaatcaatagaaaaatatttaaatt 17734715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33969273 - 33969364
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| ||||||||||||| || | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  33969273 atgtgaaaaattactaaagacaataaagcatggttatttaaaggttaattttatactctaaattataaaatcaataccaaaatatttaaatt 33969364  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41262433 - 41262342
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  41262433 atgtgaaaaattactaaagacaataaagcatggttatttaaaagttaattttatactctaaattatcaaatcaatagcaaaatatttaaatt 41262342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 32904990 - 32904932
Alignment:
Q  34 ttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| |||| |||||||||||||| ||||| |||||||| ||||||||||||||    
T  32904990 ttatttaaatgtgaattttatactccaaaatataaaattaataacaaaatatttaaatt 32904932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13421767 - 13421675
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaa-taataaaatatttaaatt 92  Q
    |||| |||||||||  || || ||||||||| ||||||||||||||| |||| ||||| ||||||||| ||||| ||  ||||||||||||||    
T  13421767 atgtaaaaaattactaaaatcgattaagtatagttatttaaaagtgaattttgtactctaaattataaaattaattacaaaaatatttaaatt 13421675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30354260 - 30354328
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||||| ||  |||||||||||||| || ||||||||| |||| ||||||||||||||||||||    
T  30354260 atgtgaaaaataactaaagtcaattaagtaatgcttatttaaatgtgaattttatactccaaattataa 30354328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 45488505 - 45488418
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtga--tttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  |||||||||||||||| |||||||||| |||   |||||||||| ||||||||| |||||||| ||| || |||||||    
T  45488505 aaaattactaaagtcaattaagtatgattatttaaaattgaatattttatactctaaattataaaattaataacaaactaattaaatt 45488418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 30991136 - 30991073
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||| | |||||||||| ||||||||| ||| |||  ||||||||||||||    
T  30991136 tatggttatttaaaagttaattttatactctaaattataaaattgatagcaaaatatttaaatt 30991073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 44284090 - 44284154
Alignment:
Q  26 aagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||||||||| |||||||||| ||||| ||  | |||||| ||||||||||||||    
T  44284090 aagtatggttatttaaaagtgaattttatactctaaatttta--aataataacaaaatatttaaatt 44284154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 3939931 - 3940017
Alignment:
Q  3 gtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    |||||||||||   ||| |||| |||||||||||||||||||| | |||| ||||| ||||||||| ||||||   |||||||||||    
T  3939931 gtgaaaaattaataaagacaataaagtatggttatttaaaagttaattttgtactctaaattataaaattaatggcaaaatatttaa 3940017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4855647 - 4855738
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||| |||| || || |||||||||||||| | |||||||||| ||||||||| || || |  ||||||||||||||    
T  4855647 atgtaaaaaattactaaagacaataaaatagggttatttaaaagttaattttatactctaaattataaaatcaaaagcaaaatatttaaatt 4855738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 31846834 - 31846905
Alignment:
Q  5 gaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaata 76  Q
    ||||||||||  ||| |||| |||||||||||||||||| | | |||||||||| || |||||| |||||||    
T  31846834 gaaaaattactaaagacaataaagtatggttatttaaaatttaattttatactctaatttataaaattaata 31846905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 33972711 - 33972774
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||||   |||||| ||| ||||||||| |||||||  ||||||||||||||    
T  33972711 tatggttatttaaaagttggttttatgctctaaattataaaattaatagcaaaatatttaaatt 33972774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34695417 - 34695327
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||  ||| |||||||||||||||||||| |  | ||||||| |||||||||  ||||||  ||||||||||||||    
T  34695417 atgtgaaaaattactaaagataataaagtatggttatttaaaagt-aaatgtatactctaaattataaatttaataggaaaatatttaaatt 34695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34925116 - 34925207
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  ||| |||| ||| |||||||||||||| | | |||||||||| ||||||||| || ||||  ||||||||| ||||    
T  34925116 atgtgaaaaactactaaagacaataaagcatggttatttaaaatttaattttatactctaaattataaaatcaatagcaaaatatttgaatt 34925207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 42861849 - 42861920
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| ||| |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||| ||||    
T  42861849 caataaagcatggttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttgaatt 42861920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 35366706 - 35366794
Alignment:
Q  3 gtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaat 91  Q
    ||||||||||||  ||||  || || |||| |||||||||| ||| ||||||  || || |||||| |||||||| |||||||||||||    
T  35366706 gtgaaaaattactaaagtagataaaatatgattatttaaaaatgaattttatgttctaagttataaaattaataacaaaatatttaaat 35366794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36016473 - 36016565
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgattttta-tactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  ||| |||| ||| |||||||||||||||| | ||||| ||||| ||||||||| || ||||  ||||||||| ||||    
T  36016473 atgtgaaaaactactaaagacaataaagcatggttatttaaaagttaattttactactctaaattataaaatcaatagcaaaatatttgaatt 36016565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42830914 - 42831005
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||||||| ||||||||||||||    
T  42830914 atgtgaaaaattactaaagtcaattaagtatggttatttaaaagtaaattttatactctaaattataaaattaataacaaaatatttaaatt 42831005  T

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Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 46683056 - 46683147
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  46683056 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 46683147  T

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Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 43320297 - 43320385
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||| |||| ||||||||| ||||    
T  43320297 tgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattgataacaaaatattttaatt 43320385  T

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Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2275451 - 2275360
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| || |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  2275451 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagcgaattttgtactctaaattataaaattaattacaaaatatttaaatt 2275360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 4007885 - 4007810
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||| |||||||||    
T  4007885 aagtcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataaaaaaagatttaaatt 4007810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 25087702 - 25087617
Alignment:
Q  6 aaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||  |||||| |||| ||||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||    
T  25087702 aaaaattactaaagtca-ttaaatatggttatttaaaagtgaattttatacttcaaattataaaattaataacaaaatatttaaatt 25087617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 36605083 - 36604998
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| ||||||||| ||||||||||||||| |||||||||| ||||||||| |||||||| |||| |||||||||    
T  36605083 aaaattactaaagtcgattaagtattgttatttaaaagtgaattttatactctaaattataaaattaataacaaaagatttaaatt 36604998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 45738340 - 45738271
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||| |||||||||    
T  45738340 attaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaagatttaaatt 45738271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17109670 - 17109578
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   |||||||| ||||| || ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  17109670 atgtgaaaaattagtgaagtcaatcaagtaatgcttatttaaatgtgaattttatactccaaattataaaattaataacaaaatatttaaatt 17109578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 45194062 - 45193986
Alignment:
Q  17 aagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||| || ||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  45194062 aagtcaattaagtaatgcttatttaaatgtgaattttatactccaaattataaaattaataacaaaatatttaaatt 45193986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 47233410 - 47233319
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   ||||| |||||||||||| ||| |||||||| |||||||||| | ||||||| |||||||| ||||||||||||||    
T  47233410 atgtgaaaaattattaaagtcgattaagtatggtaattaaaaagtgaattttatactctatattataaaattaataaaaaaatatttaaatt 47233319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50143747 - 50143656
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||| |||||||| |||| ||| |||||||||| ||||||||| |||||||| | ||||||||||||    
T  50143747 atgtgaaaaattactaaagtcgattaagtgtggttattcaaaaatgaattttatactctaaattataaaattaataacacaatatttaaatt 50143656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 4667260 - 4667345
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| ||||||||||||||||||||||||| |||| ||||| ||||||||| |||||| | || |||||||||||    
T  4667260 aaaattactaaagtcgattaagtatggttatttaaaagtgaattttgtactctaaattataaaattaattacaagatatttaaatt 4667345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33126567 - 33126656
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||| | ||||| || || ||||||||||||||||||| |||||||||| ||||||||  | |||||| ||||||||||||||    
T  33126567 atgtgaaaaattatgaaagtcgataaattatggttatttaaaagtgaattttatactctaaattata--aataataacaaaatatttaaatt 33126656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41574951 - 41574859
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  ||||||||||| || || ||||||||| |||| |||||||||||||||||| | |||||||| ||||||||||||||    
T  41574951 atgtgaaaaataactaaagtcaattaactaatgtttatttaaatgtgaattttatactccaaattattaaattaataacaaaatatttaaatt 41574859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51362187 - 51362095
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||||||| |||||| || ||||||||| |||| |||||||||||||||||||| |||||||  ||||||||||||||    
T  51362187 atgtaaaaaattactaaagtcaaataagtaatgcttatttaaatgtgaattttatactccaaattataaaattaatatcaaaatatttaaatt 51362095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19072073 - 19071982
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || || ||||||||| ||||||||||||||| |||| || || ||||||||| |||||| | ||||||||||||||    
T  19072073 atgtgaaaaattactaaaatcgattaagtatagttatttaaaagtgaattttgtagtctaaattataaaattaattacaaaatatttaaatt 19071982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19119963 - 19119872
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || || ||||||||| ||||||||||||||| |||| || || ||||||||| |||||| | ||||||||||||||    
T  19119963 atgtgaaaaattactaaaatcgattaagtatagttatttaaaagtgaattttgtagtctaaattataaaattaattacaaaatatttaaatt 19119872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 23739491 - 23739416
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| |||||||||| |||||||||||||| ||||| |||| ||||||||| |||||||| |||| |||||||||    
T  23739491 aagtcgattaagtatgattatttaaaagtgaattttagactctaaattataaaattaataacaaaagatttaaatt 23739416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29344875 - 29344966
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  || || |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||| | || |||||||||    
T  29344875 atgtgaaaaagtactaaaatcgattaagtatgattatttaaaagtgagttttatactctaaattataaaattaataacacaaaatttaaatt 29344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37419166 - 37419075
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| | ||||||||   ||||||||  |||||||| ||||||||||||||    
T  37419166 atgtgaaaaattactaaagacaataaagtatggttatttaaaagttaattttataccataaattatagaattaataacaaaatatttaaatt 37419075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41575554 - 41575645
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||   || |||| |||||||||||||||||||| | |||||||||| ||| ||||| |||||||  ||||||||||||||    
T  41575554 atgtgaaaaattactatagacaataaagtatggttatttaaaagttaattttatactctaaaatataaaattaatagaaaaatatttaaatt 41575645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27226036 - 27225947
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||| | ||||  || ||||||| |||||||||||||| |||||||||| ||||||||  | |||||| ||||||||||||||    
T  27226036 atgtgaaaaattatgaaagttgataaagtatgattatttaaaagtgaattttatactctaaattata--aataataacaaaatatttaaatt 27225947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8061409 - 8061500
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||| ||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  8061409 atgtgaaaaattactaaagacaataaagcatggttatataaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 8061500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12057370 - 12057461
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| || |||| |||||||||||| | |||| ||||| ||||||||| |||||||  ||||||||||||||    
T  12057370 atgtgaaaaattactaaagacaataaaatatgcttatttaaaagttaattttttactctaaattataaaattaataggaaaatatttaaatt 12057461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25991113 - 25991022
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||| ||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  25991113 atgtgaaaaattactaaagacaataaagcatggttatttgaaagttaattttatactctaaattataaaatcaatagaaaaatatttaaatt 25991022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18572269 - 18572180
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaa 90  Q
    ||||||||||||||  ||| | || ||||| |||||||||||||| | |||||||||| ||||| ||| |||||||  ||||||||||||    
T  18572269 atgtgaaaaattactaaagacgataaagtacggttatttaaaagttaattttatactctaaattttaaaattaatagaaaaatatttaaa 18572180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 49129391 - 49129480
Alignment:
Q  3 gtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||  ||| |||| || |||||||||| |||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  49129391 gtgaaaaattactaaagacaatcaaatatggttattaaaaagttaattttatactctaaattataaaataaatagcaaaatatttaaatt 49129480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 7307322 - 7307383
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||| |||||||||| ||||||||  | |||||| ||||||||||||||    
T  7307322 tatggttatttaaaagtgaattttatactctaaattata--aataataacaaaatatttaaatt 7307383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 35383306 - 35383385
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaata 84  Q
    |||||||||||  |||||||  |||||  ||||||||||||||| |||||||||| ||||||||| |||||||| ||||||    
T  35383306 tgaaaaattactaaagtcaaa-aagtaatgttatttaaaagtgaattttatactctaaattataaaattaataacaaaata 35383385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 831628 - 831537
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  ||| |||| ||| |||  ||||||||||| | |||||||||| ||||||||| || ||||| ||||||||||||||    
T  831628 atgtgaaaaatcactaaagacaataaagcatgactatttaaaagttaattttatactctaaattataaaatcaataacaaaatatttaaatt 831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 1116800 - 1116709
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   ||| |||| | |||||||||||||||||| | |||||||||  ||||||||| |||||||  ||| ||||||||||    
T  1116800 atgtgaaaaattattaaagacaataaggtatggttatttaaaagttaattttatactataaattataaaattaatagcaaagtatttaaatt 1116709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 6644798 - 6644747
Alignment:
Q  41 aaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  6644798 aaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 6644747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13573860 - 13573769
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| | |||||||||||||| | |||||| ||| ||||||||| || ||||  ||||||||||||||    
T  13573860 atgtgaaaaattactaaagacaataaagcagggttatttaaaagttaattttatgctctaaattataaaatcaatagcaaaatatttaaatt 13573769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27532272 - 27532181
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   ||| |||| ||| |||||||||||||||| | |||||||||| |||| |||| || ||||  ||||||||||||||    
T  27532272 atgtgaaaaattaataaagacaataaagcatggttatttaaaagttaattttatactctaaatcataaaatcaatagcaaaatatttaaatt 27532181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 29510154 - 29510083
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| ||||||||||  |||||||| | ||| |||||| ||||||||| ||||||| |||||||||||||||    
T  29510154 caataaagtatggttgcttaaaagttaatttcatactctaaattataaaattaatagtaaaatatttaaatt 29510083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 47291951 - 47292042
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  ||  |||| |||||||||||||||||||| | |||||||||| ||| ||||| | |||||  ||||||||||||||    
T  47291951 atgtgaaaaataactaaatacaataaagtatggttatttaaaagttaattttatactctaaaatataaaactaatagcaaaatatttaaatt 47292042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51764546 - 51764455
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| ||||  ||||| || ||||||||||||| |||| | | | |||||||| ||||||||| |||||||| |||||||| |||||    
T  51764546 atgtgaaaatttactaaagtcgataaagtatggttattcaaaattaaatattatactctaaattataaaattaataacaaaatattaaaatt 51764455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 28971164 - 28971102
Alignment:
Q  30 atggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||| ||||||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  28971164 atggttgtttaaaagttaattttatactctaaattataaaattaatagcaaaatatttaaatt 28971102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 24065385 - 24065446
Alignment:
Q  31 tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||| | |||||||||| ||| || || ||||||| |||||||||||||||    
T  24065385 tggttatttaaaagttaattttatactctaaaataaaaaattaatagtaaaatatttaaatt 24065446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11916830 - 11916919
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| ||| ||  |||||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  11916830 atgtgaaaaattactaaagacaataaagcatgatt--ttaaaagttaattttatactctaaattataaaattaatagcaaaatatttaaatt 11916919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 19998013 - 19998069
Alignment:
Q  30 atggttatttaaaagtgatttttatactccaaattataacattaataataaaatatt 86  Q
    |||||||||||||||| | |||||||||| ||||||||| |||||||  ||||||||    
T  19998013 atggttatttaaaagttaattttatactctaaattataaaattaatagaaaaatatt 19998069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36511775 - 36511863
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||| | |||| | | |||||||||||||||||| ||| |||||||||| ||||| ||  | |||||| ||||||||||||||    
T  36511775 atgtgaaaaattatgaaagtga-taaagtatggttatttaaaaatgaattttatactctaaatttta--aataataacaaaatatttaaatt 36511863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 47553522 - 47553610
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||| |||  ||| |||| || ||||| ||||||||||| | |||||||||| ||| ||||| |||||||  ||||||||||||||    
T  47553522 tgaaaaagtactaaagacaataaaatatggctatttaaaagttaattttatactctaaaatataaaattaatagaaaaatatttaaatt 47553610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28197853 - 28197944
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  |||||||||||||| ||| |||||||||| ||||||| | || ||||  ||||||| ||||||    
T  28197853 atgtgaaaaattactaaagacaataaaacatggttatttaaaattgaattttatactctaaattatcaaatcaatagcaaaatatctaaatt 28197944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31765696 - 31765605
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||   || |||| ||| || ||||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  31765696 atgtgaaaaattactacagacaataaagcattgttatttaaaagttaattttatactctaaattatcaaatcaatagcaaaatatttaaatt 31765605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44645626 - 44645535
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| |  ||| |||| ||||||| |||||||||||| | |||||||||  |||||||||  ||||||  |||||||| |||||    
T  44645626 atgtgaaaaattgctaaagacaataaagtatgattatttaaaagttaattttatactataaattataaacttaatagcaaaatattaaaatt 44645535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44648982 - 44648891
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| |  ||| |||| ||||||| |||||||||||| | |||||||||  || ||||||  ||||||  ||||||||||||||    
T  44648982 atgtgaaaaattgctaaagacaataaagtatgattatttaaaagttaattttatactataagttataaacttaatagcaaaatatttaaatt 44648891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 45737667 - 45737576
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  ||| |||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  45737667 atgtgaaaaattactaaagacaataaatcatgattatttaaaagttaattttatactctaaattatcaaatcaatagaaaaatatttaaatt 45737576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 47216418 - 47216327
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||| |||| || || |||||||| ||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  47216418 atgtaaaaaattactaaagacaataaaatagggttatttgaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 47216327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 9091365 - 9091307
Alignment:
Q  34 ttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  9091365 ttatttaaaagttagttttatactctaaattataaaatcaatagcaaaatatttaaatt 9091307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 10012196 - 10012258
Alignment:
Q  30 atggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||| | |||||||||| ||||| ||| || ||||  ||||||||||||||    
T  10012196 atggttatttaaaagttaattttatactctaaattttaaaatcaatagaaaaatatttaaatt 10012258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 28044835 - 28044749
Alignment:
Q  6 aaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||  ||| |||| || || |||||||||||||| | |||||||||| ||||||||| || ||||  ||||||| ||||||    
T  28044835 aaaaattactaaagacaataaaatagggttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatataaatt 28044749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 51612209 - 51612271
Alignment:
Q  30 atggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| ||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  51612209 atggatatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 51612271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 15357346 - 15357406
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||| ||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  15357346 ggttatttgaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 15357406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 16536698 - 16536646
Alignment:
Q  17 aagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataa 68  Q
    |||||||||||||| |  ||||||||| |||| ||||||||||||||||||||    
T  16536698 aagtcaattaagtaattcttatttaaatgtgaattttatactccaaattataa 16536646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 23775803 - 23775851
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataa 77  Q
    ||||||||||||||||||| || |||| || ||||||||| ||||||||    
T  23775803 tatggttatttaaaagtgaattctatattctaaattataaaattaataa 23775851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 27931099 - 27931039
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||| | |||||||||| ||||||||| || || |  ||||||||||||||    
T  27931099 ggttatttaaaagttaattttatactctaaattataaaatcaacagcaaaatatttaaatt 27931039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11650 - 11559
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  11650 atgtgaaaaattactaaagtcgattaagtatgtttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 11559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13772096 - 13772187
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| |||||| || |||||||| ||||||||||||||    
T  13772096 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatactctaaattacaaaattaataacaaaatatttaaatt 13772187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28464578 - 28464669
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||| | ||||||| |||||||| |||||||| |||||    
T  28464578 atgtgaaaaattactaaagtcgattaagcatggttatttaaaagtgatttttatactctacattataaaattaataacaaaatattcaaatt 28464669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 54092550 - 54092641
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   || || ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  54092550 atgtgaaaaattattaaattcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 54092641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 30192910 - 30192979
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  30192910 attaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 30192979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37735216 - 37735125
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| | |||||||||||||| |||| ||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  37735216 atgtgaaaaattactaaagtcgactaagtatggttattaaaaattgaattttatactctaaattataaaattaataacaaaatatttaaatt 37735125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 46076670 - 46076602
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||||||    
T  46076670 attaagtatggttatttaaaagtgaatttt-tactccaaattataaaattaataacaaaatatttaaatt 46076602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4950297 - 4950206
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  || || ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| | || |||||||||    
T  4950297 atgtgaaaaagtactaaaatcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacacaaaatttaaatt 4950206  T

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Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25009769 - 25009860
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||  ||||||||||||||||||||||||| |||||||||| ||| | ||| |||||||| |||| |||||||||    
T  25009769 atgtgaaaaattactaaagttgattaagtatggttatttaaaagtgaattttatactctaaactgtaaaattaataacaaaaaatttaaatt 25009860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26705396 - 26705305
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||||||  ||||||||| ||||||| | |||||||| ||||||| ||||||    
T  26705396 atgtgaaaaattactaaagtcgattaaatatggttatttaaaagtgaagtttatactctaaattatcaaattaataacaaaatatataaatt 26705305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 49621044 - 49620953
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| | |||||||||||||||||||| ||  ||||||||| ||||||||| |||||| | ||||||||||||||    
T  49621044 atgtgaaaaattactaaagtcgaataagtatggttatttaaaagcgaaatttatactctaaattataaaattaattacaaaatatttaaatt 49620953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53306035 - 53305944
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| | ||||||| || ||||||||| |||||||| |||||||| |||||    
T  53306035 atgtgaaaaattactaaagacaataaagtatggttatttaaaagttaattttatattctaaattataaaattaataagaaaatattcaaatt 53305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 6711572 - 6711503
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||  |||||||| |||| |||||||||    
T  6711572 attaagtatggttatttaaaagtgaattttatactctaaattatagaattaataacaaaagatttaaatt 6711503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 7797331 - 7797416
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| |||||||||| |||||||||||||| ||||||| || ||||||||| |||||||| |||| |||||||||    
T  7797331 aaaattactaaagtcgattaagtatgattatttaaaagtgaattttatattctaaattataaaattaataacaaaagatttaaatt 7797416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 35666309 - 35666224
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||  ||||| |||||||||||| |||||||||||| |||||||||| ||||||||| || ||||| |||| |||||||||    
T  35666309 aaaattactaaagtcgattaagtatggtaatttaaaagtgaattttatactcaaaattataaaataaataacaaaagatttaaatt 35666224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 50264722 - 50264653
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| ||||||| |||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  50264722 attaagtatgattatttacaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 50264653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35853923 - 35853831
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  ||||||||| |||| || ||||||||| |||| |||||||||||||||||||| | |||||| ||||||||||||||    
T  35853923 atgtgaaaaataactaaagtcaattcagtaatgtttatttaaatgtgaattttatactccaaattataaaagtaataacaaaatatttaaatt 35853831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17723133 - 17723224
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||| |||| ||||||||||  |||||||| | |||||||||| ||||||||| ||||||| |||||||||||||||    
T  17723133 atgtaaaaaattactaaagacaataaagtatggttgcttaaaagttaattttatactctaaattataaaattaatagtaaaatatttaaatt 17723224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20544620 - 20544711
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  ||||| ||||||| |||||||| |||| ||| |||||||||| ||||||||| |||||||| | ||||||||||||    
T  20544620 atgtgaaaaagtactaaagtcgattaagtttggttattcaaaaatgaattttatactctaaattataaaattaataacacaatatttaaatt 20544711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 37423530 - 37423593
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||| |||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  37423530 tatggttatttaaaggtgaattttatactctaaattataaaattaataacaaaatatttaaatt 37423593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 721689 - 721778
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    ||||||||||| ||  ||||| |||||||| || |||||||||  ||| |||||||||||||||||||| |||||||| |||||||||||    
T  721689 atgtgaaaaataactaaagtcgattaagtaatgcttatttaaatttgaattttatactccaaattataaaattaataaaaaaatatttaa 721778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8138684 - 8138593
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||| |||| ||||||||||  |||||||| | ||||||| || ||||||||| ||||||| |||||||||||||||    
T  8138684 atgtaaaaaattactaaagacaataaagtatggttgcttaaaagttaattttatattctaaattataaaattaatagtaaaatatttaaatt 8138593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 16960613 - 16960676
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||| |||  ||||||||||||||    
T  16960613 tatggttatttaaaagttatttttatactctaaattataaaattgatagcaaaatatttaaatt 16960676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19313708 - 19313617
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  19313708 atgtgaaaaattactaaagacaataaaggatggttatttaaaagttaattttatactctaaattatcaaatcaatagcaaaatatttaaatt 19313617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 47930922 - 47930831
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||   || |||| |||||||||||||||||||| | |||||||||| ||| ||||| ||| |||  ||||||||||||||    
T  47930922 atgtgaaaaattactatagacaataaagtatggttatttaaaagttaattttatactctaaaatataaaatttatagaaaaatatttaaatt 47930831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 48372758 - 48372687
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||||||||||||| | |||||||||| ||| ||||| |||||||  ||||||||||||||    
T  48372758 caataaagtatggttatttaaaagttaattttatactctaaaatataaaattaatagcaaaatatttaaatt 48372687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 36650937 - 36650875
Alignment:
Q  30 atggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  36650937 atggttatttaaaagttaattttatactctaaattataaaattaatagaaaaatatttaaatt 36650875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 51268036 - 51268121
Alignment:
Q  6 aaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||  ||| |||| ||||||| |||||||||||| | |||||||||| ||||||||| |||||| | ||||||||||||||    
T  51268036 aaaaattactaaagacaataaagtatgattatttaaaagttaattttatactctaaattataagattaat-agaaaatatttaaatt 51268121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 755233 - 755144
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    ||||||||||| ||  ||||| |||||||| || |||||||||  ||| ||||||||| |||||||||| |||||||| |||||||||||    
T  755233 atgtgaaaaataactaaagtcgattaagtaatgcttatttaaatttgaattttatacttcaaattataaaattaataaaaaaatatttaa 755144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51020012 - 51019923
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| ||| | ||||  || ||||||| |||||||||||||| |||||||||| ||||||||  | |||||| ||||||||||||||    
T  51020012 atgtgaaaagttatgaaagttgataaagtatgattatttaaaagtgaattttatactctaaattata--aataataacaaaatatttaaatt 51019923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 55814696 - 55814764
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||||| ||  |||||||||||||| || ||||||||| |||| ||||||||||||||||||||    
T  55814696 atgtgaaaaataactaaagtcaattaagtaatgcttatttaaatgtgaattttatactccaaattataa 55814764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4964259 - 4964169
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| || |||||| ||||||||| ||||| ||||| ||| | |||||||| |||||||| |||||| |||||||    
T  4964259 atgtgaaaaattactaaagtcgataaagtatagttatttaatagtgaattttacact-ctaattataaaattaataacaaaataattaaatt 4964169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 9784995 - 9785058
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||| | |||||||||| ||||||||| ||| |||  ||||||||||||||    
T  9784995 tatggttatttaaaagttaattttatactctaaattataaaattgatagcaaaatatttaaatt 9785058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10555966 - 10556057
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| || ||||||||||||||||| | |||  | ||| ||||| ||| |||||||| ||||||||||||||    
T  10555966 atgtgaaaaattaccaaagacaataaattatggttatttaaaagttaatttattgctctaaattttaaaattaataacaaaatatttaaatt 10556057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21037660 - 21037569
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||   ||| ||| |||||||||||||| | | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  21037660 atgtgaaaaattactaaaaataataaagcatggttatttaaaatttaattttatactctaaattataaaattaatagcaaaatatttaaatt 21037569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 32448652 - 32448743
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  |||||||||||||| | | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  32448652 atgtgaaaaattactaaagacaataaaacatggttatttaaaatttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 32448743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33032541 - 33032632
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  | | |||| || ||||||||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  33032541 atgtgaaaaattactaatgacaataaattatggttatttaaaagttaattttatactctaaattatcaaatcaatagcaaaatatttaaatt 33032632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33046923 - 33046832
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||  ||| ||  |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  33046923 atgtgaaaaattactaaagataataaaacatggttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 33046832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37424159 - 37424250
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||| ||||||||||||||||| || |||| ||||| |||| |||| | |||| | ||| ||||||||||    
T  37424159 atgtgaaaaattactaaagtcgattatgtatggttatttaaaagcgaattttgtactctaaataataaaactaattacaaattatttaaatt 37424250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 16192061 - 16192121
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  16192061 ggttatttaaaagttaattttatactcaaaattataaaatcaatagcaaaatatttaaatt 16192121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18362429 - 18362497
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||||| ||  |||||||||||||| || ||||||||| |||| ||||||||||||| ||||||    
T  18362429 atgtgaaaaataactaaagtcaattaagtaatgcttatttaaatgtgaattttatactccaagttataa 18362497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36600497 - 36600429
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||||| ||  |||||||||||||| || ||||||||| |||| ||||||||||||| ||||||    
T  36600497 atgtgaaaaataactaaagtcaattaagtaatgcttatttaaatgtgaattttatactccaagttataa 36600429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42073755 - 42073823
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttattt-aaaagtgatttttatactccaaattataa 68  Q
    ||||||||||||||  ||||| ||| | ||||||||||| |||||||| |||||||||| |||||||||    
T  42073755 atgtgaaaaattactaaagtcgattcaatatggttatttaaaaagtgaattttatactctaaattataa 42073823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7852099 - 7852190
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||| | || ||||||  ||||||||| || ||||   |||||||||||||    
T  7852099 atgtgaaaaattactaaagacaataaagcatggttatttaaaagttaattatatactataaattataaaatcaatagctaaatatttaaatt 7852190  T

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Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17729893 - 17729984
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  ||| |||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  17729893 atgtgaaaaattactaaagacaataaaacatgattatttaaaagttaattttatactctaaattatcaaatcaatagcaaaatatttaaatt 17729984  T

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Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23721761 - 23721852
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| ||| |||||||||||| | |||||||||| ||||||| | || ||||   |||||||||||||    
T  23721761 atgtgaaaaattactaaagacaataaagcatgattatttaaaagttaattttatactctaaattatcaaatcaatagcgaaatatttaaatt 23721852  T

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Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26808744 - 26808653
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  |||||| ||||||||| | |||||||| | ||||||||| || ||||  ||||||||||||||    
T  26808744 atgtgaaaaattaccaaagacaataaaacatggttctttaaaagttaattttataccctaaattataaaatcaatagcaaaatatttaaatt 26808653  T

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Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29979405 - 29979315
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| |||||| |||||||||| || | |||||||||  ||||||||| |||| || | |||||||||||||    
T  29979405 atgtgaaaaattaccaaagacaataaagtatagttatttaaaggttaattttatactataaattataaaattattagt-aaatatttaaatt 29979315  T

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Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38720328 - 38720419
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| |  ||| |||| ||||||| |||||||||||| | |||||||||  |||||||||  ||||||  |||||||| |||||    
T  38720328 atgtgaaaaattgctaaagacaataaagtatgattatttaaaagttaattttatactataaattataaacttaatagcaaaatattaaaatt 38720419  T

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Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49702755 - 49702846
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||| | | |||| || || |||||||| ||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  49702755 atgtaaaaaattacgaatgacaataaaatagggttatttgaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 49702846  T

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Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 55139722 - 55139813
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  ||| |||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  55139722 atgtgaaaaattactaaagacaataaatcatgattatttaaaagttaattttatactctaaattatcaaatcaatagaaaaatatttaaatt 55139813  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 7479746 - 7479804
Alignment:
Q  34 ttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| | ||||||| || ||||||||| |||||||  ||||||||||||||    
T  7479746 ttatttaaaagttaattttatattctaaattataaaattaatagaaaaatatttaaatt 7479804  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 50825031 - 50825076
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||| ||||||||||||||| |||| ||||| |||||||||    
T  50825031 attaagtatagttatttaaaagtgaattttgtactctaaattataa 50825076  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 36422387 - 36422327
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||| | |||||||||| ||||||||| || ||||  |||||||| |||||    
T  36422387 ggttatttaaaagttaattttatactctaaattataaaatcaatagaaaaatattaaaatt 36422327  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 55069175 - 55069115
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||| ||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  55069175 ggttatttgaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 55069115  T

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Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13625612 - 13625521
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  13625612 atgtgaaaaattactaaagtcgcttaagtatggttatttaaaagtgaattttatactctaaattataaaattaataaaaaaatatttaaatt 13625521  T

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Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18364995 - 18364904
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||| | ||||||||||||    
T  18364995 atgtgaaaaattactaaagtcgattaagtatggttatttaaaattgaattttatactctaaattataaaattaataacacaatatttaaatt 18364904  T

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Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27638861 - 27638952
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   || || ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  27638861 atgtgaaaaattattaaattcgattaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 27638952  T

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Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 32374119 - 32374210
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   ||||| ||||||||| ||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  32374119 atgtgaaaaattattaaagtcgattaagtatcgttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 32374210  T

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Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 48841734 - 48841825
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||| | |||||||||| ||||||||| |||||||| |||| |||||||||    
T  48841734 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtaaattttatactctaaattataaaattaataacaaaagatttaaatt 48841825  T

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Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 1262761 - 1262670
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||| |||| ||||| ||||||||| |||||||  ||||||||||||||    
T  1262761 atgtgaaaaattactaaagtcggttaagtatggttatttaaaagtgaattttttactctaaattataaaattaatagcaaaatatttaaatt 1262670  T

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Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11345073 - 11345164
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||  ||||||||||||||||||||||||| |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  11345073 atgtgaaaaattactaaagttgattaagtatggttatttaaaagtgaattttgtactctaaattataaaattaattacaaaatatttaaatt 11345164  T

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Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 47794364 - 47794455
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || ||  |||||||||||||||||||||| | |||||||||| ||||||||| |||||||| ||||||||||||||    
T  47794364 atgtgaaaaattactaaattcggttaagtatggttatttaaaagttaattttatactctaaattataaaattaataacaaaatatttaaatt 47794455  T

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Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49764871 - 49764962
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||  |||||||||||||||||||||| | ||||||||||  |||||||| |||||||| ||||||||||||||    
T  49764871 atgtgaaaaattactaaagtcggttaagtatggttatttaaaagttaattttatactctgaattataaaattaataacaaaatatttaaatt 49764962  T

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Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 10689130 - 10689061
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||| |||||||||    
T  10689130 attaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaagatttaaatt 10689061  T

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Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1363764 - 1363855
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||  ||| |||||||||||||||||||| | |||||||||  ||||||||| |||||||| ||||||||||||||    
T  1363764 atgtgaaaaattactaaagaaaataaagtatggttatttaaaagttaattttatactataaattataaaattaataacaaaatatttaaatt 1363855  T

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Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3090130 - 3090221
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||||||||||| |||||||||| |||| ||||  ||||||||| |||||| | ||||||||||||||    
T  3090130 atgtgaaaaattactaaagtcgattaagtatggttacttaaaagtgaattttgtactgtaaattataaaattaattacaaaatatttaaatt 3090221  T

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Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16067589 - 16067498
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| ||||  ||||| |||||||||| |||||||||||||| |||||||||| ||||||||| ||| |||| |||| |||||||||    
T  16067589 atgtgaaaatttactaaagtcgattaagtatgattatttaaaagtgaattttatactctaaattataaaattgataacaaaagatttaaatt 16067498  T

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Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33978975 - 33978884
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||| |||||||||||||| | || ||||||| || ||||||||| |||||||| ||||||||||||||    
T  33978975 atgtgaaaaattactaaagtcgattaaatatggttatttaaaggcgagttttataatctaaattataaaattaataacaaaatatttaaatt 33978884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 49080322 - 49080231
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| || |||| ||||| ||||||||| |||||  | ||||||||||||||    
T  49080322 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagcgaattttgtactctaaattataaaattaactacaaaatatttaaatt 49080231  T

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Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 27255650 - 27255564
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    |||||||| ||  |||||||||||||| || ||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||    
T  27255650 tgaaaaataactaaagtcaattaagtaatgcttatttaaatgtgaattttatactccaaattataaaattaataacaaaatatttaa 27255564  T

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Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41587024 - 41587116
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||   |||||||||||||| || ||||||||| |||| ||||||||| |||| ||||| |||||||| ||||||||||||||    
T  41587024 atgtgaaaaattagtgaagtcaattaagtaatgcttatttaaatgtgaattttatacttcaaaatataaaattaataacaaaatatttaaatt 41587116  T

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Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11388765 - 11388674
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||| ||| ||| |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  11388765 atgtgaaaaattactaaagtaaataaagcatggttatttaaaagttaattttatactctaaattataaaatcaatagaaaaatatttaaatt 11388674  T

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Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 25480874 - 25480799
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| |||||| ||| |||| ||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  25480874 aagtcgattaagcatgattatataaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 25480799  T

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Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27393471 - 27393562
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||  |||| |||||||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  27393471 atgtgaaaaattactaaatacaataaagtatggttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 27393562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 30127955 - 30127868
Alignment:
Q  5 gaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||  ||||  |||||||||||||||||||||| || |||||||||  ||||||||| |||||||| ||| ||||||||||    
T  30127955 gaaaaattactaaagtagattaagtatggttatttaaaagcgaattttatactataaattataaaattaataaaaaactatttaaatt 30127868  T

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Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44950674 - 44950583
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || || ||||| ||||||||||||||||||| |||||||||  ||| ||||| |||||||| ||| ||||||||||    
T  44950674 atgtgaaaaattactaaattcgattaaatatggttatttaaaagtgaattttatactataaaatataaaattaataagaaattatttaaatt 44950583  T

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Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 53490412 - 53490503
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||| |||||| ||||||||||| || |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  53490412 atgtgaaaaattactaaagtcgattgagtatgattatttaaaagcgaattttgtactctaaattataaaattaattacaaaatatttaaatt 53490503  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 6296456 - 6296547
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  6296456 atgtgaaaaattactaaagacaataaaacatggttatttaaaagttaattttatactctaaattataaaatcaatagaaaaatatttaaatt 6296547  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28724007 - 28724098
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||   ||| ||||||| |||||||||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  28724007 atgtgaaaaattactaaaaaaaataaagtatgattatttaaaagttaattttatactctaaattataaaattaatagaaaaatatttaaatt 28724098  T

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Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30605058 - 30605149
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| ||||||||||| ||||||||||||  | |||||||||  |||||||||  ||||||  ||||||||||||||    
T  30605058 atgtgaaaaattactaaagacaattaagtattgttatttaaaagataattttatactataaattataaacttaatagcaaaatatttaaatt 30605149  T

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Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11397363 - 11397296
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataa 68  Q
    |||||||||||||   |||| ||| ||| |||||||||||||||| |||||||||||| |||||||||    
T  11397363 atgtgaaaaattattaaagtaaataaagcatggttatttaaaagttatttttatactctaaattataa 11397296  T

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Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 33314403 - 33314462
Alignment:
Q  33 gttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||| |||||||||| |||||||||  ||||| | ||||||||||||||    
T  33314403 gttatttaaaagtgaattttatactctaaattataaatttaattacaaaatatttaaatt 33314462  T

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Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40927876 - 40927951
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaata 76  Q
    ||||||||||||||  ||| |||| || ||||||||||||||||| | |||||||||| ||| ||||| |||||||    
T  40927876 atgtgaaaaattactaaagacaataaaatatggttatttaaaagttaattttatactctaaaatataaaattaata 40927951  T

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Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 54403925 - 54403834
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| ||| |||||||||||| | |||||||||  ||||||||| || ||||  ||||||||||||||    
T  54403925 atgtgaaaaattactaaagacaataaagcatgattatttaaaagttaattttatactttaaattataaaatcaatagcaaaatatttaaatt 54403834  T

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Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22517345 - 22517422
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttat--actccaaattataacattaata 76  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| | ||||||  |||| ||||||||| |||||||    
T  22517345 atgtgaaaaattactaaagacaataaagtatggttatttaaaagttagttttatacactctaaattataaaattaata 22517422  T

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Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 33114914 - 33114862
Alignment:
Q  17 aagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataa 68  Q
    |||||||||||||| || ||||||||| |||| ||||||||||||||||||||    
T  33114914 aagtcaattaagtaatgcttatttaaatgtgaattttatactccaaattataa 33114862  T

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Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 45306725 - 45306637
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  ||| |||| ||| || | ||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  45306725 tgaaaaattactaaagacaataaagcattgctatttaaaagttaattttatactctaaattataaaatcaatagaaaaatatttaaatt 45306637  T

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Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8449527 - 8449618
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  |||||||||||||||| | ||||||| |  ||||||||| || ||||  ||||||||||||||    
T  8449527 atgtgaaaaattactaaagacaataaatcatggttatttaaaagttaattttataatttaaattataaaatcaatagcaaaatatttaaatt 8449618  T

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Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 11582278 - 11582341
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||| | |||||||||  ||||||||| ||| |||  ||||||||||||||    
T  11582278 tatggttatttaaaagttaattttatactttaaattataaaattgatagcaaaatatttaaatt 11582341  T

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Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 17058206 - 17058269
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||| ||| ||||||| || || |||||| |||||||| ||||||||||||||    
T  17058206 tatgattatttaaaaatgaattttatattctaagttataaaattaataacaaaatatttaaatt 17058269  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17764701 - 17764744
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaag 44  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||    
T  17764701 atgtgaaaaattactaaagtcgattaagtatggttatttaaaag 17764744  T

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Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19066021 - 19066064
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaag 44  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||    
T  19066021 atgtgaaaaattactaaagtcgattaagtatggttatttaaaag 19066064  T

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Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27346404 - 27346495
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||  ||| ||| |||||||||||||||| | |||||||||| |||||| |  || ||||  ||||||||||||||    
T  27346404 atgtgaaaaattactaaagataataaagcatggttatttaaaagttaattttatactctaaattacataatcaatagcaaaatatttaaatt 27346495  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27397213 - 27397122
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| ||| |||||||||| | | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  27397213 atgtgaaaaattactaaagacaataaagcatgcttatttaaaatttaattttatactctaaattatcaaatcaatagaaaaatatttaaatt 27397122  T

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Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41044493 - 41044584
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||  |||| ||| || ||||||||||||| | |||||||||| ||||||||| ||  |||  ||||||||||||||    
T  41044493 atgtgaaaaattactaaaaacaataaagcatagttatttaaaagttaattttatactctaaattataaaatcgatagcaaaatatttaaatt 41044584  T

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Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7724928 - 7724842
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaa 90  Q
    ||||||||||||| | |||| | | |||||||||||||||||||||| |||||||||  ||||| ||  | |||||| ||||||||||||    
T  7724928 atgtgaaaaattatgaaagtga-taaagtatggttatttaaaagtgaattttatactttaaatttta--aataataacaaaatatttaaa 7724842  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 291475 - 291383
Alignment:
Q  1 atgtgaaaaattacgtaag-tcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| ||||| || |||||| |||||||||| | |||||||||| ||| | ||| ||| |||  ||||||||||||||    
T  291475 atgtgaaaaattactaaagatcaataaaatatggtaatttaaaagtaaattttatactctaaaatctaaaatttatagcaaaatatttaaatt 291383  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14600720 - 14600652
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagt-atggttatttaaaagtgatttttatactccaaattataa 68  Q
    ||||||||||| ||  ||||||||||||| ||| ||||||||| |||| | ||||||| ||||||||||    
T  14600720 atgtgaaaaataactaaagtcaattaagtaatgcttatttaaatgtgaatattatactgcaaattataa 14600652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 19546691 - 19546647
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacatta 73  Q
    ||||||||||||||||| | |||||||||| ||||||||| ||||    
T  19546691 tatggttatttaaaagttaattttatactctaaattataaaatta 19546647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 20030292 - 20030380
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||| |||  ||| |||| || ||||||||||||||||| | |||||||||| ||| ||||  |||||||   |||||||||||||    
T  20030292 tgaaaaagtactaaagacaataaaatatggttatttaaaagttaattttatactctaaaatatataattaatagacaaatatttaaatt 20030380  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 45241504 - 45241444
Alignment:
Q  32 ggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||| ||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  45241504 ggttatttgaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 45241444  T

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Target: scaffold0712 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4029 - 4120
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || || |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  4029 atgtgaaaaattactaaattcgattaagtatgattatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 4120  T

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Target: scaffold0709 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4049 - 4140
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || || |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  4049 atgtgaaaaattactaaattcgattaagtatgattatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 4140  T

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Target: scaffold0289 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 3763 - 3849
Alignment:
Q  6 aaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||  |||||  |||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  3763 aaaaattactaaagtcgcttaagtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaaatatttaaatt 3849  T

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Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34250419 - 34250510
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  |||||  ||||||||| |||||||||||||| |||| ||||| ||||||||| |||||||| ||||||||||||||    
T  34250419 atgtgaaaaattactaaagtcgcttaagtatgattatttaaaagtgaattttctactctaaattataaaattaataacaaaatatttaaatt 34250510  T

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Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2092049 - 2092140
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| ||||||| |  ||||||||| | | |||| ||||||||||||||    
T  2092049 atgtgaaaaattactaaagtcgattaagtatggttatttaaaagtgaattttatattttaaattataaaaattataacaaaatatttaaatt 2092140  T

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Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21802316 - 21802407
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  || || ||||||||| ||||||||||||||| |||| ||||| ||||||||| |||||| | ||||||||||||||    
T  21802316 atgtgaaaaattactaaaatcgattaagtatagttatttaaaagtgaattttgtactctaaattataaaattaattaaaaaatatttaaatt 21802407  T

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Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24620258 - 24620349
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||| ||||| |||  ||||||||| ||||||||  | |||||||||||    
T  24620258 atgtgaaaaattaccaaagtcgattaagtatggttatttaaaagtgaattttaaactttaaattataaaattaataacgacatatttaaatt 24620349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 14313531 - 14313462
Alignment:
Q  23 attaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||| |||| |||||||||    
T  14313531 attaagtatgattatttaaaagtgaattttatactctaaattataaaattaataacaaaagatttaaatt 14313462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33950598 - 33950688
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  || || ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| | || |||||||||    
T  33950598 atgtgaaaaagtactaaaatcgattaagtatggttatttaaaagtgaattttatactctaaattataa-attaataacacaaaatttaaatt 33950688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7448588 - 7448500
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    ||||||||||||||  ||| | || || ||||||||||||||||| | |||||||||| ||||||||| |||||||  |||||||||||    
T  7448588 atgtgaaaaattactaaagacgataaaatatggttatttaaaagttaattttatactctaaattataaaattaatagcaaaatatttaa 7448500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 33276085 - 33276024
Alignment:
Q  29 tatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||| |||||||||| ||||||||  | |||||||||||||||||||||    
T  33276085 tatggttatttaaaagtgaattttatactctaaattata--aataataataaaatatttaaatt 33276024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 15499223 - 15499298
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| |||||||||||||||||||||| || |||| ||||| |||||||||  ||||| | ||||||||||||||    
T  15499223 aagtcgattaagtatggttatttaaaagcgaattttgtactctaaattataaagttaattagaaaatatttaaatt 15499298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31281957 - 31282048
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||| | ||| |||||| ||||||||| || ||||  ||||||||||||||    
T  31281957 atgtgaaaaattactaaagacaataaagcatggttatttaaaagttaatttcatactctaaattataaaatcaatagcaaaatatttaaatt 31282048  T

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Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31882223 - 31882314
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  ||| |||| || | ||||||||||||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  31882223 atgtgaaaaatgactaaagacaataaaatttggttatttaaaagttaattttatactctaaattataaaattaatagcaaaatatttaaatt 31882314  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 2522999 - 2522941
Alignment:
Q  34 ttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| |||| |||||||||||||| ||||| |||||||| ||||||||||||||    
T  2522999 ttatttaaatgtgaattttatactccaaaatataaaattaataacaaaatatttaaatt 2522941  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 4126268 - 4126357
Alignment:
Q  2 tgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaat 91  Q
    |||||||||||||  ||| |||| ||| ||| |||||||||||| | |||||||||| ||||||||| || ||||  |||||||||||||    
T  4126268 tgtgaaaaattactaaagacaataaagcatgattatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaat 4126357  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 32522195 - 32522107
Alignment:
Q  4 tgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||  |||||  |||||||| |||||||||||||   |||||||||| | ||||||| |||| ||| ||||||||||||||    
T  32522195 tgaaaaattactaaagtcggttaagtattgttatttaaaagtatattttatactctagattataaaattactaacaaaatatttaaatt 32522107  T

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Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2655296 - 2655205
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  |||||||||||||||| | ||||| |||| ||||||||| || ||||  ||||||||||||||    
T  2655296 atgtgaaaaattactaaagacaataaatcatggttatttaaaagttaattttaaactctaaattataaaatcaatagcaaaatatttaaatt 2655205  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 17337212 - 17337295
Alignment:
Q  7 aaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaa 90  Q
    ||||||||  ||| |||| |||||||||||||||||| | | |||||||||| ||||| ||| |||||||  ||||||||||||    
T  17337212 aaaattactaaagacaataaagtatggttatttaaaatttaattttatactctaaattttaaaattaatagcaaaatatttaaa 17337295  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30461803 - 30461712
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  ||| |||| ||| |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||| ||||    
T  30461803 atgtgaaaaactactaaagacaataaagcatggttatttaaaagttaattttatactctaaattataaaatcaatagaaaaatatttgaatt 30461712  T

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Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 13444185 - 13444123
Alignment:
Q  30 atggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||| | ||||||| || |||| |||| ||||||| |||||||||||||||    
T  13444185 atggttatttaaaagttaattttatagtctaaatgataaaattaatagtaaaatatttaaatt 13444123  T

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Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 4100905 - 4100994
Alignment:
Q  2 tgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaat 91  Q
    |||||||||||||  ||| |||| ||  ||| |||||||||||| | |||||||||| ||||||||| || ||||  |||||||||||||    
T  4100905 tgtgaaaaattactaaagacaataaaacatgattatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaat 4100994  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14224202 - 14224293
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||| |||  ||| |||| ||  |||||||||||||||| | ||||||||||  |||||||| || ||||  ||||||||||||||    
T  14224202 atgtgaaaaactactaaagacaataaaacatggttatttaaaagttaattttatactcttaattataaaatcaatagcaaaatatttaaatt 14224293  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 32114139 - 32114210
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| ||| |||||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||| ||||    
T  32114139 caataaagcatggttatttaaaagttaattttatactctaaattataaaatcaatagaaaaatatttgaatt 32114210  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 13489782 - 13489737
Alignment:
Q  47 atttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||| |||||| || |||||||| ||||||||||||||    
T  13489782 atttttatactctaaattacaaaattaataacaaaatatttaaatt 13489737  T

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Target: scaffold0201 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15687 - 15597
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaat 91  Q
    ||||||||||||||  ||||| |||||||||| |||||||||||||| |||||||||| ||||||||| |||| ||| ||| |||||||||    
T  15687 atgtgaaaaattactaaagtcgattaagtatgattatttaaaagtgaattttatactctaaattataaaattattaacaaagtatttaaat 15597  T

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Target: scaffold0201; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15070 - 15161
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||||| ||||| ||| ||||||||| ||||| |||||||||| ||||||||| |||| ||| ||||||||||||||    
T  15070 atgtgaaaaattactaaagtcgattaactatagttatttaatagtgaattttatactctaaattataaaattattaacaaaatatttaaatt 15161  T

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Target: scaffold0695 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2583 - 2492
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||| ||  ||  |||| |||||||||||||||||||| | |||||||||| ||| ||||| |||||||| ||||||||||||||    
T  2583 atgtgaaaaataactaaatacaataaagtatggttatttaaaagttaattttatactctaaaatataaaattaataacaaaatatttaaatt 2492  T

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Target: scaffold0159 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34744 - 34653
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||  |||| || ||||||||||||||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  34744 atgtgaaaaattactaaaaacaataaaatatggttatttaaaagttaattttatactctaaattataaaattaatagcaaaatatttaaatt 34653  T

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Target: scaffold0051 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 11375 - 11438
Alignment:
Q  27 agtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaa 90  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||| ||||||||    
T  11375 agtatggttatttaaaagtgaattttatactctaaattataaaattaataacaaagtatttaaa 11438  T

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Target: scaffold0971 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 3447 - 3374
Alignment:
Q  17 aagtcaattaagta-tggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaa 89  Q
    |||||||||||||| |  ||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||    
T  3447 aagtcaattaagtaatccttatttaaatgtgaattttatactccaaattataaaattaataaaaaaatatttaa 3374  T

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Target: scaffold1192 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 554 - 629
Alignment:
Q  17 aagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||| || |||| |||||||| |||| |||||||||||||| ||||||||| |||||||| | ||||||||||||    
T  554 aagtcgataaagtgtggttattcaaaaatgatttttatactctaaattataaaattaataacacaatatttaaatt 629  T

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Target: scaffold0361 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16860 - 16951
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| |||||||||  ||| |||| ||||||||||  |||||||| | ||||||| || ||||||||| ||||||| |||||||||||||||    
T  16860 atgtaaaaaattactaaagacaataaagtatggttgcttaaaagttaattttataatctaaattataaaattaatagtaaaatatttaaatt 16951  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 161619 - 161528
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||| | |||||||||||||| | |||||||||| ||||||||| || ||||  ||||||||||||||    
T  161619 atgtgaaaaattactaaagacaataaagcagggttatttaaaagttaattttatactctaaattataaaatcaatagcaaaatatttaaatt 161528  T

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Target: scaffold0004 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 351611 - 351540
Alignment:
Q  21 caattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||| ||| |||||||||||||||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  351611 caataaagaatggttatttaaaagttaattttatactctaaattataaaattaatagaaaaatatttaaatt 351540  T

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Target: scaffold0533 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9847 - 9756
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  ||| ||||||| |||| | |||||||||| ||||||||| |||||||  ||||||||||||||    
T  9847 atgtgaaaaattactaaagacaataaaacatgattatttagaagtcaattttatactctaaattataaaattaatagcaaaatatttaaatt 9756  T

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Target: scaffold0068 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 26148 - 26082
Alignment:
Q  26 aagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||||||||   |||||||||| ||||||||| | |||||  ||||||||||||||    
T  26148 aagtatggttatttaaaagtttattttatactctaaattataaaagtaatagcaaaatatttaaatt 26082  T

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Target: scaffold0340 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12554 - 12463
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||| ||  ||| |||||||||||| | |||||||||| ||||||| | || ||||  ||||||||||||||    
T  12554 atgtgaaaaattactaaagacaataaaacatgattatttaaaagttaattttatactctaaattatcaaatcaatagcaaaatatttaaatt 12463  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25579 - 25488
Alignment:
Q  1 atgtgaaaaattacgtaagtcaattaagtatggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||||||||  ||| |||  | || ||||| ||||||||| | |||||| ||| ||||||||| |||||||  ||||||||||||||    
T  25579 atgtgaaaaattactaaagacaacaaggtttggttgtttaaaagttaattttattctctaaattataaaattaatagcaaaatatttaaatt 25488  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 26212 - 26150
Alignment:
Q  30 atggttatttaaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    |||||||||||||||| | |||||||||| ||||||||| || || |  ||||||||||||||    
T  26212 atggttatttaaaagttaattttatactctaaattataaaatcaacatcaaaatatttaaatt 26150  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 31030 - 30977
Alignment:
Q  39 taaaagtgatttttatactccaaattataacattaataataaaatatttaaatt 92  Q
    ||||||||| |||||||||| |||||||||  ||||||  ||||||||||||||    
T  31030 taaaagtgaattttatactctaaattataaagttaatagcaaaatatttaaatt 30977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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