View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14586_low_48 (Length: 203)
Name: NF14586_low_48
Description: NF14586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14586_low_48 |
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Alignment Details
Target: chr2 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 43651382 - 43651214
Alignment:
| Q |
15 |
gaaatgaacattagttaataatgaacacatgcaaaattagcatttccacaaatgtgttactaatttttcttaagaaggaaatagtatacaccaaacactt |
114 |
Q |
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| T |
43651382 |
gaaaagaacattagttaataatgaacacatgcaaaattagcatttccacaaatgtgttactaatttttcttaagaaggaaatagtatacaccaaacactt |
43651283 |
T |
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| Q |
115 |
gttttgattctatctaattacttgatacaattagaattttggacatgtgaacaatttgttggagtggtt |
183 |
Q |
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| T |
43651282 |
gttttgattctatctaattacttgatacaattagaattttgaacatgtgaacaatttgttggagtggtt |
43651214 |
T |
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