View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14587_high_4 (Length: 328)

Name: NF14587_high_4
Description: NF14587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14587_high_4
NF14587_high_4
[»] chr5 (18 HSPs)
chr5 (14-311)||(15327730-15328027)
chr5 (14-311)||(18710732-18711029)
chr5 (28-311)||(725451-725734)
chr5 (14-305)||(22454790-22455081)
chr5 (14-311)||(5603334-5603631)
chr5 (15-311)||(30451547-30451843)
chr5 (57-305)||(24297532-24297780)
chr5 (45-167)||(20951029-20951151)
chr5 (15-311)||(24415364-24415660)
chr5 (245-311)||(20951229-20951295)
chr5 (57-167)||(18382920-18383030)
chr5 (57-167)||(26199376-26199486)
chr5 (57-167)||(27415328-27415438)
chr5 (57-167)||(33942500-33942610)
chr5 (240-310)||(18383103-18383173)
chr5 (240-310)||(26199233-26199303)
chr5 (240-310)||(27415511-27415581)
chr5 (240-310)||(33942683-33942753)
[»] chr4 (10 HSPs)
chr4 (14-311)||(14935041-14935338)
chr4 (28-311)||(114898-115181)
chr4 (15-311)||(54696731-54697027)
chr4 (57-167)||(16268281-16268391)
chr4 (264-311)||(26815275-26815322)
chr4 (57-166)||(7843510-7843619)
chr4 (15-118)||(26815026-26815129)
chr4 (57-135)||(6695398-6695476)
chr4 (240-310)||(6695581-6695651)
chr4 (245-311)||(7843365-7843431)
[»] chr8 (14 HSPs)
chr8 (14-311)||(45496181-45496478)
chr8 (14-305)||(33598848-33599139)
chr8 (57-305)||(12918393-12918641)
chr8 (223-311)||(19753651-19753739)
chr8 (15-305)||(18235464-18235754)
chr8 (15-305)||(18244915-18245205)
chr8 (15-118)||(20737848-20737951)
chr8 (57-167)||(14888740-14888850)
chr8 (240-310)||(14888597-14888667)
chr8 (57-167)||(22833918-22834028)
chr8 (243-311)||(22834104-22834172)
chr8 (15-118)||(20724950-20725053)
chr8 (240-310)||(21209878-21209948)
chr8 (57-135)||(21210053-21210131)
[»] chr3 (15 HSPs)
chr3 (15-311)||(25508317-25508613)
chr3 (28-311)||(19687547-19687830)
chr3 (27-289)||(5147740-5148002)
chr3 (14-311)||(48981437-48981734)
chr3 (264-311)||(28361637-28361684)
chr3 (57-167)||(6425488-6425598)
chr3 (45-110)||(40090815-40090880)
chr3 (57-168)||(8976026-8976137)
chr3 (15-118)||(28361830-28361933)
chr3 (240-310)||(8976209-8976279)
chr3 (240-310)||(9540498-9540568)
chr3 (57-135)||(16404789-16404867)
chr3 (240-310)||(16404972-16405042)
chr3 (61-110)||(2158033-2158082)
chr3 (245-310)||(6425676-6425741)
[»] chr6 (17 HSPs)
chr6 (28-311)||(8997596-8997879)
chr6 (28-311)||(11376546-11376829)
chr6 (28-311)||(9006779-9007048)
chr6 (14-311)||(27747957-27748254)
chr6 (15-305)||(25897232-25897521)
chr6 (83-163)||(17945905-17945984)
chr6 (57-167)||(16901126-16901236)
chr6 (240-310)||(16901309-16901379)
chr6 (57-167)||(18163245-18163355)
chr6 (57-167)||(24929216-24929326)
chr6 (57-167)||(29562600-29562710)
chr6 (57-167)||(31359999-31360109)
chr6 (14-60)||(17945853-17945899)
chr6 (240-310)||(18163428-18163498)
chr6 (240-310)||(24929073-24929143)
chr6 (240-310)||(29562783-29562853)
chr6 (240-310)||(31360182-31360252)
[»] scaffold0096 (1 HSPs)
scaffold0096 (28-311)||(51765-52048)
[»] chr7 (22 HSPs)
chr7 (28-311)||(609482-609765)
chr7 (61-305)||(14641731-14641975)
chr7 (222-311)||(15178478-15178567)
chr7 (57-167)||(5388966-5389076)
chr7 (57-167)||(26306736-26306846)
chr7 (57-167)||(26359972-26360082)
chr7 (57-167)||(32101560-32101670)
chr7 (57-167)||(44900479-44900589)
chr7 (57-167)||(46500294-46500404)
chr7 (15-118)||(15178271-15178374)
chr7 (57-168)||(16139234-16139345)
chr7 (240-310)||(5388823-5388893)
chr7 (57-135)||(6537664-6537742)
chr7 (57-167)||(8504229-8504339)
chr7 (240-310)||(8504412-8504482)
chr7 (57-167)||(9542291-9542401)
chr7 (240-310)||(26306919-26306989)
chr7 (240-310)||(26359829-26359899)
chr7 (240-310)||(32101743-32101813)
chr7 (240-310)||(44900662-44900732)
chr7 (240-310)||(46500477-46500547)
chr7 (245-310)||(9542148-9542213)
[»] scaffold0028 (2 HSPs)
scaffold0028 (28-311)||(84572-84855)
scaffold0028 (15-311)||(101245-101541)
[»] chr2 (12 HSPs)
chr2 (28-311)||(24991803-24992086)
chr2 (14-311)||(1793719-1794016)
chr2 (45-167)||(27167031-27167153)
chr2 (51-167)||(22905319-22905435)
chr2 (245-311)||(22905513-22905579)
chr2 (245-311)||(27166887-27166953)
chr2 (57-167)||(18654398-18654508)
chr2 (57-167)||(45017530-45017640)
chr2 (240-310)||(9510672-9510742)
chr2 (57-135)||(9510847-9510925)
chr2 (240-310)||(18654581-18654651)
chr2 (240-310)||(45017713-45017783)
[»] scaffold0021 (1 HSPs)
scaffold0021 (14-311)||(166013-166310)
[»] scaffold0049 (3 HSPs)
scaffold0049 (14-311)||(17725-18022)
scaffold0049 (245-311)||(85434-85500)
scaffold0049 (42-167)||(85578-85703)
[»] scaffold0500 (2 HSPs)
scaffold0500 (118-311)||(8783-8976)
scaffold0500 (28-121)||(6602-6695)
[»] chr1 (2 HSPs)
chr1 (14-305)||(14279009-14279300)
chr1 (57-167)||(16158063-16158173)
[»] scaffold0773 (1 HSPs)
scaffold0773 (57-305)||(5845-6093)
[»] scaffold0313 (2 HSPs)
scaffold0313 (45-167)||(12725-12847)
scaffold0313 (245-311)||(12925-12991)
[»] scaffold0003 (2 HSPs)
scaffold0003 (45-167)||(148180-148302)
scaffold0003 (245-311)||(148380-148446)
[»] scaffold0142 (2 HSPs)
scaffold0142 (243-311)||(33808-33876)
scaffold0142 (58-167)||(33952-34061)
[»] scaffold0141 (2 HSPs)
scaffold0141 (45-167)||(29112-29234)
scaffold0141 (245-311)||(29312-29378)
[»] scaffold0014 (1 HSPs)
scaffold0014 (45-167)||(149843-149965)
[»] scaffold0058 (2 HSPs)
scaffold0058 (57-167)||(51634-51744)
scaffold0058 (240-310)||(51491-51561)
[»] scaffold0010 (1 HSPs)
scaffold0010 (15-305)||(259607-259896)
[»] scaffold0611 (1 HSPs)
scaffold0611 (57-167)||(1224-1334)
[»] scaffold0254 (2 HSPs)
scaffold0254 (240-310)||(4477-4547)
scaffold0254 (57-135)||(4650-4728)
[»] scaffold0163 (1 HSPs)
scaffold0163 (61-110)||(18683-18732)


Alignment Details
Target: chr5 (Bit Score: 298; Significance: 1e-167; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 14 - 311
Target Start/End: Complemental strand, 15328027 - 15327730
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15328027 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 15327928  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15327927 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 15327828  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15327827 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 15327730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 18710732 - 18711029
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18710732 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 18710831  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18710832 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcgggaaaaatcttatttaccggatctcgaaacaaaaatg 18710931  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18710932 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatctcttgaaaaggataaatggatttggcataaaagggctggacatataagt 18711029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 28 - 311
Target Start/End: Complemental strand, 725734 - 725451
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||| |    
T  725734 ttattggtaagataaattctactaaaattgaaaatgttcaatatgtagaaggattaaaacataacctaattagcatcagtcaattgtgtgatagtggttt 725635  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||  |||| |||||||| ||     |||||    
T  725634 tgaagtaatattcaaacctcacacatgcgaagtcagacaaatatcttcaggaaaaatcctatttaccggatcaagaaataaaaatgtctacactctatac 725535  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  725534 ttagatgaactccctgtcgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggcaggccatataagt 725451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 305
Target Start/End: Complemental strand, 22455081 - 22454790
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    |||||||||  | ||||||||||| |  |||||||| || || ||| | ||||||||||| |||||||||||||||||| || | ||||| ||||||||     
T  22455081 caaaggtaaatgtattattggtaaaaataattctgctaaaatagaagacgttcaatatgttgaaggattaaaacacaacctactaagcataagtcaatta 22454982  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    |||||||| ||| ||||||| |  || |||||  ||| ||| ||||| | |||||| ||| ||||||| ||||| ||||| || |||||||| ||||||     
T  22454981 tgtgacagtggttttgaagtaatctttaaacccaacatatgtgaagtcaaacaagtttctacaggaaacatcttttttactggctctcgaaagaaaaatc 22454882  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
    ||||||| ||||  ||||||||  | || | |||| | || || || |||  ||| || ||||||||||||||||||||||| |||||||||    
T  22454881 tttatgttttatttttagatgatattccagctgaaacctgtttcatgtccaatgacaaagataaatggatttggcataaaagagctggacat 22454790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 5603334 - 5603631
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||| || ||||||||||||| |||| |||| || || ||||||||||||||||| ||||| |||||||||||  |  | ||||| ||||||||     
T  5603334 caaaggtaaaggtattattggtaagaaaaatactgctaaaatcgaaaatgttcaatatgttgaaggtttaaaacacaatctgctaagcataagtcaatta 5603433  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    ||||| || ||| ||||||| |  || |||||| ||| ||| ||||||| ||||  ||| || |||||||| || ||||| || ||| |||  |||||      
T  5603434 tgtgatagtggttttgaagtcaattttaaacctaacatatgtgaagtaaaacaaacatcctcgggaaaaattttctttactggttctagaataaaaaact 5603533  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    | ||||| |||||| ||||||| || || | ||||||||| |||||     ||||||| || |||||||||||||| ||||| ||||||||| |||||    
T  5603534 tatatgttttatacctagatgatcttccagctgaatcatgttttatgggttttgaaaaagacaaatggatttggcacaaaagagctggacatgtaagt 5603631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 311
Target Start/End: Complemental strand, 30451843 - 30451547
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || ||||||||||| | | | |||||||| |||||  ||||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  30451843 aaaggtaaaggtattattggtaaaaaagactctgcaaaaattgaggatgttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 30451744  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    |||| || ||  |||||||||  ||||||||| | |||||    |||| |||   ||| ||||| || || || |||||||  ||| |||| |||||  |    
T  30451743 gtgatagtggctttgaagttattttcaaacctaatacatgtattgtaaaacatacatcctcaggtaagattttctttaccgcttctagaaagaaaaacct 30451644  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
     ||||  ||||||||||||||  | || |  ||| |||| |||||  | |||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  30451643 atatgctttatacttagatgatattccagcagaaacatgttttatgacacttgaaaaagataaatggatttggcacaaaagagctggacatataagt 30451547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 305
Target Start/End: Complemental strand, 24297780 - 24297532
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||||||||| ||||| |||||||| ||  || | |||||||||||||| |||||||| ||  |||||||||  || |||||| ||| ||| |    
T  24297780 gaaaatgttcaatatgttgaaggtttaaaacataatctactaagcatcagtcaattatgtgacagtggctttgaagttatttttaaacctaacatatgtg 24297681  T
Q  157 aagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatacttagatgaactccctgttgaatcatgctt 256  Q
    |||| | ||||||  |  ||||||| ||  | || || || |||||||  |||||| | || || ||||   |||||||  | || | |||||| |||||    
T  24297680 aagtcaaacaagtgaccacaggaaatattctcttcactgggtctcgaatgaaaaatctctacgttttatttctagatgacattccagctgaatcttgctt 24297581  T
Q  257 tatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
    ||| ||| |||| || ||||||||||||||||||||||| |||||||||    
T  24297580 tatgtccattgacaaagataaatggatttggcataaaagagctggacat 24297532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 20951029 - 20951151
Alignment:
Q  45 tctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaac 144  Q
    ||||| ||||| ||||||||||| ||||||||||| || ||||||||  || ||||||| |||||||||||||| || ||  ||||||||| ||| ||||    
T  20951029 tctgctaagatagaaaatgttcagtatgtagaaggtttgaaacacaatctacttagcataagtcaattgtgtgatagtggatttgaagttatatttaaac 20951128  T
Q  145 ctcacacatgcgaagtaagacaa 167  Q
    || ||| ||| ||| ||||||||    
T  20951129 ctaacatatgtgaaataagacaa 20951151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 311
Target Start/End: Original strand, 24415364 - 24415660
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || || |||||||| | | | |||||||| |||||  ||||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  24415364 aaaggtaaaggtatcattggtaaaaaagactctgcaaaaattgaggatgttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 24415463  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    |||| || ||  | ||||||   ||||||||| | | |||    |||| |||   ||| ||||| || || || |||||||  ||| |||| |||||  |    
T  24415464 gtgatagtggcttcgaagttgttttcaaacctaatatatgtattgtaaaacatacatcctcaggtaagattttctttaccgcttctagaaagaaaaacct 24415563  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
     ||||  ||||||||||||||  | || || ||| |||| |||||  | |||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  24415564 atatgctttatacttagatgatattccagtagaaacatgttttatgacacttgaaaaagataaatggatttggcacaaaagagctggacatataagt 24415660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 20951229 - 20951295
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  20951229 tgaatcatgttttatttctcttgaaaaagataaatggatttggcacaaaagagctggtcatataagt 20951295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 18382920 - 18383030
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  18382920 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 18383019  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  18383020 aagtcagacaa 18383030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 26199486 - 26199376
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  26199486 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 26199387  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  26199386 aagtcagacaa 26199376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 27415328 - 27415438
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  27415328 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 27415427  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  27415428 aagtcagacaa 27415438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 33942500 - 33942610
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  33942500 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 33942599  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  33942600 aagtcagacaa 33942610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 18383103 - 18383173
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  18383103 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 18383173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 26199303 - 26199233
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  26199303 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 26199233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 27415511 - 27415581
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  27415511 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 27415581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 33942683 - 33942753
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  33942683 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 33942753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 14935041 - 14935338
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14935041 caaaggtaagggaattattggtaagataaattctgcaaaaattgaaaatgttcaatatgtagaaggtttaaaacacaacttaattagcatcagtcaattg 14935140  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14935141 tgtgacagcggtcttgaagttaccttcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 14935240  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14935241 tttatgttttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 14935338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 114898 - 115181
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||| |    
T  114898 ttattggtaagataaattctgctaaaattgaaaatgttcaatatgtagaaggattaaaacataacctaattagcatcagtcaattgtgtgatagtggttt 114997  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | |||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||| |||||||  |||| |||||||| ||     |||||    
T  114998 tgaagtaatattcaaacctcacacatgtgaagtcagacaaatatcttcaggaaaaatcctattttccggatcaagaaataaaaatgtctacactctatac 115097  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  115098 ttagatgaactccctgtcgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggcaggccatataagt 115181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 311
Target Start/End: Complemental strand, 54697027 - 54696731
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || ||||||||||| | | | |||||||| |||||  ||||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  54697027 aaaggtaaaggtattattggtaaaaaagactctgcaaaaattgaggatgttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 54696928  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    |||| || ||  | ||||||   ||||||||| ||| |||    |||| |||   ||| ||||| || || || |||||||  ||| |||| |||||  |    
T  54696927 gtgatagtggcttcgaagttgttttcaaacctaacatatgtattgtaaaacatacatcctcaggtaagattttctttaccgcttctagaaagaaaaacct 54696828  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
     ||||  ||||||||||||||  | || |  ||| |||| |||||  | |||||||| ||||||||||||||||| |||||  ||||||||||||||    
T  54696827 atatgctttatacttagatgatattccagcagaaacatgttttatgacacttgaaaaagataaatggatttggcacaaaagaactggacatataagt 54696731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 16268281 - 16268391
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  ||||||||  ||| |||||| ||| ||| |    
T  16268281 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtatttaaacctaacatatgtg 16268380  T
Q  157 aagtaagacaa 167  Q
    |||||||||||    
T  16268381 aagtaagacaa 16268391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 26815275 - 26815322
Alignment:
Q  264 cttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  26815275 cttgaaaaagataaatggatttggcacaaaagagctggacatataagt 26815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 7843619 - 7843510
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  ||||||||   || |||||| ||| ||| |    
T  7843619 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtctttaaacctaacatatgtg 7843520  T
Q  157 aagtaagaca 166  Q
    ||||||||||    
T  7843519 aagtaagaca 7843510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 26815026 - 26815129
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || || |||||||| | | | |||||||| |||||  ||||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  26815026 aaaggtaaaggtatcattggtaaaaaagactctgcaaaaattgaggatgttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 26815125  T
Q  115 gtga 118  Q
    ||||    
T  26815126 gtga 26815129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 6695398 - 6695476
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagtta 135  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||    
T  6695398 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagtta 6695476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 6695581 - 6695651
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  6695581 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 6695651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 7843431 - 7843365
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||| |||||||| ||  ||||||| || |||||||| ||||| ||||||||||| |||||||||    
T  7843431 tgaatcctgctttatgtctattgaaaaagacaaatggatctggcacaaaagggctggtcatataagt 7843365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 14 - 311
Target Start/End: Complemental strand, 45496478 - 45496181
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45496478 caaaggtaagggaattattggtaagataaattctgcaaaaattgaaaatgttcaatatgtagaaggtttaaaacacaacttaattagcatcagtcaattg 45496379  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45496378 tgtgacagcggtcttgaagttaccttcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 45496279  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45496278 tttatgttttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggttggacatataagt 45496181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 305
Target Start/End: Complemental strand, 33599139 - 33598848
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||| || ||||||||||| |  || ||||| || || ||| | ||||||||||| |||||||||||||||||| || | ||||| ||||||||     
T  33599139 caaaggtaaaggtattattggtaaaaacaactctgctaaaatagaagacgttcaatatgttgaaggattaaaacacaacctactaagcataagtcaatta 33599040  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    |||||||| ||| ||||||| |  || |||||  ||| ||| ||| | | |||||| ||| | ||||| ||||| || || || |||||||| ||||||     
T  33599039 tgtgacagtggttttgaagtaatctttaaacccaacatatgtgaaatcaaacaagtttctacgggaaacatctttttcactggctctcgaaagaaaaatc 33598940  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
    ||||||| ||||  ||||||||  | || |  ||| |||| || || ||| |||| || ||||||||||||||||||||||| |||||||||    
T  33598939 tttatgtattatttttagatgatattccagccgaaacatgtttcatgtccattgacaaagataaatggatttggcataaaagagctggacat 33598848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 57 - 305
Target Start/End: Original strand, 12918393 - 12918641
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||||||||| |||||||||||||| ||| || | ||||| |||||||| || ||||| ||| ||||||| |  || |||||  ||| ||| |    
T  12918393 gaaaatgttcaatatgttgaaggattaaaacataacctactaagcataagtcaattatgcgacagtggttttgaagtaatctttaaacccaacatatgtg 12918492  T
Q  157 aagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatacttagatgaactccctgttgaatcatgctt 256  Q
    |||| | |||||| ||| | |||||||  || || || || ||| |||| |||||| ||||||| |||| |||||||||  | || | |||| | |||||    
T  12918493 aagtcaaacaagtctctactggaaaaaatttcttcactggctctagaaagaaaaatctttatgttttattcttagatgacattccagctgaaacttgctt 12918592  T
Q  257 tatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
    ||| ||| |||| || ||||||||||||||||||||| | |||||||||    
T  12918593 tatgtccattgacaaagataaatggatttggcataaacgagctggacat 12918641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 19753651 - 19753739
Alignment:
Q  223 tatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||| |||||||| || |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  19753651 tatacctagatgaattctctgtcgaatcatgttttatatcccttgaaaaggataaatggatttggcataaaaaggctggccatataagt 19753739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 305
Target Start/End: Original strand, 18235464 - 18235754
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || | ||| |||||||  || ||||| || || ||||||||||||||||| ||||| |||||||| ||  || | |||||||||||||| |    
T  18235464 aaaggtaaaggtactatcggtaagaataactctgctaaaatagaaaatgttcaatatgttgaaggtttaaaacataatctactaagcatcagtcaattat 18235563  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    ||||||| ||  |||||||||  || |||||| ||| ||| ||||| | ||||||  |  ||||||| ||  | || || || |||||||  |||||| |    
T  18235564 gtgacagtggctttgaagttatttttaaacctaacatatgtgaagtcaaacaagtgaccacaggaaatattctcttcactgggtctcgaatgaaaaatct 18235663  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
     || || ||||   |||||||  | || | |||||| |||||||| ||| |||| || ||||||||||||||||||||||| |||||||||    
T  18235664 ctacgttttatttctagatgacattccagctgaatcttgctttatgtccattgacaaagataaatggatttggcataaaagagctggacat 18235754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 305
Target Start/End: Original strand, 18244915 - 18245205
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || | ||| |||||||  || ||||| || || ||||||||||||||||| ||||| |||||||| ||  || | |||||||||||||| |    
T  18244915 aaaggtaaaggtactatcggtaagaataactctgctaaaatagaaaatgttcaatatgttgaaggtttaaaacataatctactaagcatcagtcaattat 18245014  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    ||||||| ||  |||||||||  || |||||| ||| ||| ||||| | ||||||  |  ||||||| ||  | || || || |||||||  |||||| |    
T  18245015 gtgacagtggctttgaagttatttttaaacctaacatatgtgaagtcaaacaagtgaccacaggaaatattctcttcactgggtctcgaatgaaaaatct 18245114  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
     || || ||||   |||||||  | || | |||||| |||||||| ||| |||| || ||||||||||||||||||||||| |||||||||    
T  18245115 ctacgttttatttctagatgacattccagctgaatcttgctttatgtccattgacaaagataaatggatttggcataaaagagctggacat 18245205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 20737848 - 20737951
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || ||||||||||||| | | |||||||| |||||  ||||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  20737848 aaaggtaaaggtattattggtaagaaagactctgcaaaaattgaggatgttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 20737947  T
Q  115 gtga 118  Q
    ||||    
T  20737948 gtga 20737951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 14888850 - 14888740
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||||||||| |||||||| ||  || ||||||| |||||||||||||| || ||  ||||||||   || |||||| ||| ||| |    
T  14888850 gaaaatgttcagtatgtagaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtctttaaacctaacatatgtg 14888751  T
Q  157 aagtaagacaa 167  Q
    |||||||||||    
T  14888750 aagtaagacaa 14888740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 14888667 - 14888597
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| |||||||| ||  ||||||| || |||||||| ||||||||||||||||| ||||||||    
T  14888667 cctgctgaatcctgctttatgtctattgaaaaagacaaatggatctggcataaaagggctggtcatataag 14888597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 22833918 - 22834028
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||||||||| | |||||| ||  || ||||||| |||||||||||||| || ||  ||||||||   || |||||| ||| ||| |    
T  22833918 gaaaatgttcagtatgtagaaggttcaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtctttaaacctaacatatgtg 22834017  T
Q  157 aagtaagacaa 167  Q
    |||||||||||    
T  22834018 aagtaagacaa 22834028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 22834104 - 22834172
Alignment:
Q  243 gttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||||| || ||||| || |||||||| || |||| ||||||||| ||||||||||| |||||||||    
T  22834104 gttgaatcttgttttatgtctcttgaaaaagacaaatagatttggcacaaaagggctggtcatataagt 22834172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 20724950 - 20725053
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || ||||||||||||| | | |||||||| ||| |  | ||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  20724950 aaaggtaaaggtattattggtaagaaagactctgcaaaaattaaggaagttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 20725049  T
Q  115 gtga 118  Q
    ||||    
T  20725050 gtga 20725053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 21209948 - 21209878
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  21209948 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 21209878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 21210131 - 21210053
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagtta 135  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||    
T  21210131 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagtta 21210053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 311
Target Start/End: Complemental strand, 25508613 - 25508317
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||    
T  25508613 aaaggtaaaggtgttattggtaagataaattctgcaaaaattgaaaatgttcaatatgtagaaggtttaaaacacaacttgatcatcatcagtcaattgt 25508514  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||    
T  25508513 gtgacagtggttttgaagtgacattcaaacctcacacatgcgaagtaagacaagaatcttcaggaaaaatcttatttaccggatcaagaaataaaaatgt 25508414  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||| ||||||||||||||||||||||||||||| || || ||||| |||||||| || |||||||||||||| |||||||||||||||||||||    
T  25508413 ttatgttttatacttagatgaactccctgttgaatcctgtttaatatctcttgaaaaagacaaatggatttggcacaaaagggctggacatataagt 25508317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 19687547 - 19687830
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |    
T  19687547 ttattggtaagataaattctgctaaaattgaaaatgttcaatatgtagaaggattaaaacataacctaattagcatcagtcaattgtgtgacagtggttt 19687646  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  |||| |||||||| ||     |||||    
T  19687647 tgaagtaatattcaaacctcacacatgcgaagtaagacaaatatcttcaggaaaaatcctatttaccggatcaagaaataaaaatgtctacactctatac 19687746  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||| || |||||||||    
T  19687747 ttagatgaactctctgtcgaatcatgctttatatcccttgaaaaggatagatggatttggcacaaaagggcaggccatataagt 19687830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 27 - 289
Target Start/End: Complemental strand, 5148002 - 5147740
Alignment:
Q  27 attattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtc 126  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| || |||     
T  5148002 attattgttaaaataaattctgcaaaaattgaaaatgttcaatatgtagaaggtttaaaacataacttgattagcatcagtcaattgtgtgatagtggtt 5147903  T
Q  127 ttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttata 226  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||    ||||||||||||||||| |||||    
T  5147902 ttgaagtaacattcaaacctcacacatgagaagtaagacaagaatcttcaggaaatatcttgtttaccggatcaaagaacaaaaatgtttatgttttata 5147803  T
Q  227 cttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggca 289  Q
    |||||||||||||||| | ||||| || |||||||| |||||||| |||||||||||||||||    
T  5147802 cttagatgaactccctatcgaatcttgttttatatctcttgaaaaagataaatggatttggca 5147740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 48981437 - 48981734
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||| || ||||||||||||| |||| |||| || || ||||||||||||||||| ||||| |||||||||||  |  | ||||| ||||||||     
T  48981437 caaaggtaaaggtattattggtaagaaaaatactgctaaaatcgaaaatgttcaatatgttgaaggtttaaaacacaatctgctaagcataagtcaatta 48981536  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    ||||| || ||| ||||||| |  || |||||| ||| ||| ||||||| ||||  ||| || |||||||| || ||||| || ||| |||  |||||      
T  48981537 tgtgatagtggttttgaagtcaattttaaacctaacatatgtgaagtaaaacaaacatcctcgggaaaaattttctttactggttctagaataaaaaact 48981636  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    | ||||| |||||| ||||||| || || | ||||||||| |||||     ||||||| || |||||||||||||| ||||| ||||||||| |||||    
T  48981637 tatatgttttatacctagatgatcttccagctgaatcatgttttatgggttttgaaaaagacaaatggatttggcacaaaagagctggacatgtaagt 48981734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 28361684 - 28361637
Alignment:
Q  264 cttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  28361684 cttgaaaaagataaatggatttggcacaaaagagctggacatataagt 28361637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 6425488 - 6425598
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  6425488 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 6425587  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  6425588 aagtcagacaa 6425598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 40090880 - 40090815
Alignment:
Q  45 tctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaa 110  Q
    ||||| |||||| | |||||||||||||||||||| |||||||| |||||  | ||||||||||||    
T  40090880 tctgctaagattaagaatgttcaatatgtagaaggtttaaaacataacttgctaagcatcagtcaa 40090815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 8976026 - 8976137
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||| ||||| || ||  |||||||||  || |||||| ||| ||| |    
T  8976026 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattatgtgatagtggatttgaagttatctttaaacctaacatatgtg 8976125  T
Q  157 aagtaagacaag 168  Q
    |||| |||||||    
T  8976126 aagtcagacaag 8976137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 28361933 - 28361830
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || || |||||||| | | | |||||||| |||||  ||||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  28361933 aaaggtaaaggtatcattggtaaaaaagactctgcaaaaattgaggatgttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 28361834  T
Q  115 gtga 118  Q
    ||||    
T  28361833 gtga 28361830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 8976209 - 8976279
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  8976209 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 8976279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 9540498 - 9540568
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  9540498 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 9540568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 16404789 - 16404867
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagtta 135  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||    
T  16404789 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagtta 16404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 16404972 - 16405042
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  16404972 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 16405042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 2158033 - 2158082
Alignment:
Q  61 atgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaa 110  Q
    ||||||||||||||||||| |||||||| |||||  | ||||||||||||    
T  2158033 atgttcaatatgtagaaggtttaaaacataacttgctaagcatcagtcaa 2158082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 6425676 - 6425741
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  6425676 tgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 6425741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 8997596 - 8997879
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |    
T  8997596 ttattggtaagataaattctgctaaaattgaaaatgttcaatatgtagaaggattaaaacataacctaattagcatcagtcaattgtgtgacagtggttt 8997695  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||  |||| |||||||| ||     |||||    
T  8997696 tgaagtaatattcaaacctcacacatgcgaagtcagacaaatatcttcaggaaaaatcctatttaccggatcaagaaataaaaatgtctacactctatac 8997795  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  8997796 ttagatgaactccctgtcgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggcaggccatataagt 8997879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 11376546 - 11376829
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||| ||||| |||||||| ||||| || | ||| |||||||| | |||||  |||||    
T  11376546 ttattggtaagataaattctgcaaaaattgaaaaagtttaatatgtggaaggtttaaaacataacttgatcaacataagtcaattatttgacaatggtct 11376645  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| || |||||| |||||||||||||||| ||||||| ||| |||||||||||||| ||||| |||||  ||||  ||||||||||||| |||||     
T  11376646 tgaagtaactttcaaaactcacacatgcgaagttagacaagaatcctcaggaaaaatcttgtttactggatcaagaaattaaaatgtttatgttttatat 11376745  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||||||||||||||||||||  | |||||||| |||||||| || |||||||||||||| |||||||||||||||||||||    
T  11376746 ttagatgaactccctgttgaatcccgttttatatctcttgaaaaagacaaatggatttggcacaaaagggctggacatataagt 11376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 9006779 - 9007048
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||| ||| |    
T  9006779 ttattggtaagataaattccgctaaaattgaaaatgttcaatatgtagaaggactgaaacataacctaattagcatcagtcaattgtgtgacagtggttt 9006878  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | ||||||||||||||||||||||              ||||||||||||| | |||||||||||  |||| |||||||| ||    ||||||    
T  9006879 tgaagtaatattcaaacctcacacatgcgaa--------------ttcaggaaaaatcctttttaccggatcaagaaataaaaatgtctacactttatac 9006964  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  9006965 ttagatgaactccctgtcgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggcaggtcatataagt 9007048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 311
Target Start/End: Complemental strand, 27748254 - 27747957
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||| ||  |||||||||||||||| |||| ||| |||||||||||||||||||| ||||| |||||||| ||||| || ||||| ||||||||     
T  27748254 caaaggtaaaggtgttattggtaagataaactctgaaaaaattgaaaatgttcaatatgtggaaggtttaaaacataacttgatcagcataagtcaatta 27748155  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    |||||||  | ||||||||| |  |||||| | || ||||| ||||| | ||||||||| |||||||||||||| |||||||||||  ||||||||||||    
T  27748154 tgtgacaatgatcttgaagtaattttcaaaacccatacatgtgaagttaaacaagtatcctcaggaaaaatcttgtttaccggatcaagaaacaaaaatg 27748055  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||| ||||  ||||||||||||||| ||||||| || ||||| || || ||||| || |||||||||||||| |||||||||||||||||||||    
T  27748054 tttatgttttatttttagatgaactccctattgaatcctgttttatttctctcgaaaaagacaaatggatttggcacaaaagggctggacatataagt 27747957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 305
Target Start/End: Original strand, 25897232 - 25897521
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || | ||| |||||||  || ||||| || || ||||||||||||||||| ||||| |||||||| ||  || | ||||||| |||||| |    
T  25897232 aaaggtaaaggtactatcggtaagaataactctgctaaaatagaaaatgttcaatatgttgaaggtttaaaacataatctactaagcatcattcaattat 25897331  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    ||||||| ||  |||||||||  || |||||| ||| ||| ||||| | ||||||  |  ||||||| ||  | || || || |||||||  |||||| |    
T  25897332 gtgacagtggctttgaagttatttt-aaacctaacatatgtgaagtcaaacaagtgaccacaggaaatattctcttcactgggtctcgaatgaaaaatct 25897430  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
     || || ||||   |||||||  | || | |||||| |||||||| ||| |||| || ||||||||||||||||||||||| |||||||||    
T  25897431 ctacgttttatttctagatgacattccagctgaatcttgctttatgtccattgacaaagataaatggatttggcataaaagagctggacat 25897521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 17945905 - 17945984
Alignment:
Q  83 aaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaag 163  Q
    |||||||||||| || | ||||| ||||||||||||||  ||| || |||| || ||||||||||||||||||||||||||    
T  17945905 aaaacacaacttgatcaacatcaatcaattgtgtgacat-ggttttaaagtaaccttcaaacctcacacatgcgaagtaag 17945984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 16901126 - 16901236
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  16901126 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatttttaaacctaacatatgtg 16901225  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  16901226 aagtcagacaa 16901236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 16901309 - 16901379
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || |||||||| |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  16901309 cctgctgaatcttgttttatatctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 16901379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 18163245 - 18163355
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  18163245 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 18163344  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  18163345 aagtcagacaa 18163355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 24929326 - 24929216
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  24929326 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 24929227  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  24929226 aagtcagacaa 24929216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 29562600 - 29562710
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||||||||| | |||||| ||  || ||||||| |||||||||||||| || ||  ||||||||   || |||||| ||| ||| |    
T  29562600 gaaaatgttcagtatgtagaaggttaaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtctttaaacctaacatatgtg 29562699  T
Q  157 aagtaagacaa 167  Q
    |||||||||||    
T  29562700 aagtaagacaa 29562710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 31359999 - 31360109
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  31359999 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 31360098  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  31360099 aagtcagacaa 31360109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 17945853 - 17945899
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaa 60  Q
    ||||||||| ||||| ||||||||||||||||||| ||| |||||||    
T  17945853 caaaggtaaaggaatcattggtaagataaattctgtaaaaattgaaa 17945899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 18163428 - 18163498
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  18163428 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 18163498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 24929143 - 24929073
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  24929143 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 24929073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 29562783 - 29562853
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    ||||||||||| || ||||| ||  ||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  29562783 cctgttgaatcttgttttatgtctattgaaaaagacaaatggatctggcacaaaagggctggtcatataag 29562853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 31360182 - 31360252
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  31360182 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 31360252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 51765 - 52048
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||| |    
T  51765 ttattggtaagataaattctgctaaaattgaaaatgttcaatatgtagaaggattaaaacataacctaattagcatcagtcaattgtgtgatagtggttt 51864  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||  |||| |||||||| ||     |||||    
T  51865 tgaagtaatattcaaacctcacacatgcgaagtcagacaaatatcttcaggaaaaatcctatttaccggatcaagaaataaaaatgtctacactctatac 51964  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  51965 ttagatgaactccctgtcgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggcaggccatataagt 52048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 609482 - 609765
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||| |    
T  609482 ttattggtaagataaattctgctaaaattgaaaatgttcaatatgtagaaggattaaaacataacctaattagcatcagtcaattgtgtgatagtggttt 609581  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||  |||| |||||||| ||     |||||    
T  609582 tgaagtaatattcaaacctcacacatgcgaagtcagacaaatatcttcaggaaaaatcctatttaccggatcaagaaataaaaatgtctacactctatac 609681  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  609682 ttagatgaactccctgtcgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggcaggccatataagt 609765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 305
Target Start/End: Complemental strand, 14641975 - 14641731
Alignment:
Q  61 atgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagt 160  Q
    ||||||||||||| |||||||||||||| ||| || | ||||| |||||||| || ||||| ||| ||||||| |  || ||| |  ||| ||| |||||    
T  14641975 atgttcaatatgttgaaggattaaaacataacctactaagcataagtcaattatgcgacagtggttttgaagtaatctttaaatccaacatatgtgaagt 14641876  T
Q  161 aagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatacttagatgaactccctgttgaatcatgctttata 260  Q
     | |||||| ||| | |||||||| || || || || ||| || | |||||| ||||||| |||| |||||||||  | || | |||| | ||||||||     
T  14641875 caaacaagtctctactggaaaaattttcttcactggttctagacagaaaaatctttatgttttattcttagatgacattccagctgaaacttgctttatg 14641776  T
Q  261 tcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
    ||| || | || ||||| ||||||||||||||| | |||||||||    
T  14641775 tccattaacaaagataagtggatttggcataaacgagctggacat 14641731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 15178478 - 15178567
Alignment:
Q  222 ttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||||  | || | |||| |||| |||||  | |||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  15178478 ttatacttagatgatattccagctgaaacatgttttatgacgcttgaaaaagataaatggatttggcacaaaagagctggacatataagt 15178567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 5389076 - 5388966
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  5389076 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 5388977  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  5388976 aagtcagacaa 5388966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 26306736 - 26306846
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  26306736 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 26306835  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  26306836 aagtcagacaa 26306846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 26360082 - 26359972
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  26360082 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 26359983  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  26359982 aagtcagacaa 26359972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 32101560 - 32101670
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  32101560 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 32101659  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  32101660 aagtcagacaa 32101670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 44900479 - 44900589
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  44900479 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 44900578  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  44900579 aagtcagacaa 44900589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 46500294 - 46500404
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  46500294 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 46500393  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  46500394 aagtcagacaa 46500404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 15178271 - 15178374
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || ||||||||||||| | | |||||||| ||| |  | ||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  15178271 aaaggtaaaggtattattggtaagaaagactctgcaaaaattaaggacgttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 15178370  T
Q  115 gtga 118  Q
    ||||    
T  15178371 gtga 15178374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 168
Target Start/End: Complemental strand, 16139345 - 16139234
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||| ||||| || ||  |||||||||  || |||||| ||| ||| |    
T  16139345 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattatgtgatagtggatttgaagttatctttaaacctaacatatgtg 16139246  T
Q  157 aagtaagacaag 168  Q
    |||| |||||||    
T  16139245 aagtcagacaag 16139234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 5388893 - 5388823
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  5388893 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 5388823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 6537664 - 6537742
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagtta 135  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||    
T  6537664 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagtta 6537742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 8504229 - 8504339
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| ||  |  |||||||||  || |||||| ||| ||| |    
T  8504229 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtagatttgaagttatctttaaacctaacatatgtg 8504328  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  8504329 aagtcagacaa 8504339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 8504412 - 8504482
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  8504412 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 8504482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 9542401 - 9542291
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  ||||||||   || |||||| ||| ||| |    
T  9542401 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtctttaaacctaacatatgtg 9542302  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  9542301 aagtcagacaa 9542291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 26306919 - 26306989
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  26306919 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 26306989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 26359899 - 26359829
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  26359899 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 26359829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 32101743 - 32101813
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  32101743 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 32101813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 44900662 - 44900732
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  44900662 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 44900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 46500477 - 46500547
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  46500477 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 46500547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 9542213 - 9542148
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  9542213 tgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 9542148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 176; Significance: 8e-95; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 84572 - 84855
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    |||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||    
T  84572 ttattggtaagataaactctacaaaaattgaaaatgttcaataggtagaaggattaaaacataacctaattagcatcagtcaattgtgtgacagtgatct 84671  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||  |||| |||||||| ||     |||||    
T  84672 tgaagtaatattcaaacctcacacatgcaaagtaagacaaatatcttcaggaaaaatcctatttaccggatcaagaaataaaaatgtctacactctatac 84771  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||    
T  84772 ttagatgaactccttgtcgaatcatgctttatatcccttgaaaaggataaatgcatttggcataaaagggcaggccatataagt 84855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 311
Target Start/End: Complemental strand, 101541 - 101245
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || ||||||||||| | | | |||||||| |||||  ||||||||||||| ||||| |||||||||||  || | ||||| |||||||| |    
T  101541 aaaggtaaaggtattattggtaaaaaagactctgcaaaaattgaggatgttcaatatgttgaaggtttaaaacacaatctactaagcataagtcaattat 101442  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    |||| || ||  | ||||||   ||||||||| ||| |||    |||| |||   ||| ||||| || || || |||||||  ||| |||| |||||  |    
T  101441 gtgatagtggcttcgaagttgttttcaaacctaacatatgtattgtaaaacatacatcctcaggtaagattttctttaccgcttctagaaagaaaaacct 101342  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
     ||||  ||||||||||||||  | || |  ||| |||| |||||  | |||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  101341 atatgctttatacttagatgatattccagcagaaacatgttttatgacacttgaaaaagataaatggatttggcacaaaagagctggacatataagt 101245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 24991803 - 24992086
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtct 127  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| || ||| |    
T  24991803 ttattggtaagataaattctgctaaaattgaaaatgttcaatatgtagaaggatttaaacataacctaattagcatcagtcaattgtgtgatagtggttt 24991902  T
Q  128 tgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatac 227  Q
    |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||  |||| |||||||| ||     |||||    
T  24991903 tgaagtaatattcaaacctcacacatgcgaagttagacaaatatcttcaggaaaaatcctatttaccggatcaagaaataaaaatgtctacactctatac 24992002  T
Q  228 ttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||| ||| ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  24992003 ttagatgaaatccatgtcgaatcatgttttatatcccttgaaagggataaatggatttggcataaaagggcaggccatataagt 24992086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 1793719 - 1794016
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||| || ||||||||||||| |||| |||| || || ||||||||||||||||| ||||| |||||||||||  |  | ||||| ||||||||     
T  1793719 caaaggtaaaggtattattggtaagaaaaatactgctaaaatcgaaaatgttcaatatgttgaaggtttaaaacacaatctgctaagcataagtcaatta 1793818  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    ||||| || ||| ||||||| |  || |||||| ||| ||| ||||||| ||||  ||| || |||||||| || ||||| || ||| |||  |||||      
T  1793819 tgtgatagtggttttgaagtcaattttaaacctaacatatgtgaagtaaaacaaacatcctcgggaaaaattttctttactggttctagaataaaaaact 1793918  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    | ||||| |||||| ||||||| || || | ||||||||| |||||     ||||||| || |||||||||||||| ||||| ||||||||| |||||    
T  1793919 tatatgttttatacctagatgatcttccagctgaatcatgttttatgggttttgaaaaagacaaatggatttggcacaaaagagctggacatgtaagt 1794016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 27167153 - 27167031
Alignment:
Q  45 tctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaac 144  Q
    ||||| ||||| ||||||||||| ||||||||||| || ||||||||  || ||||||| |||||||||||||| || ||  ||||||||| ||| ||||    
T  27167153 tctgctaagatagaaaatgttcagtatgtagaaggtttgaaacacaatctacttagcataagtcaattgtgtgatagtggatttgaagttatatttaaac 27167054  T
Q  145 ctcacacatgcgaagtaagacaa 167  Q
    || ||| ||| ||| ||||||||    
T  27167053 ctaacatatgtgaaataagacaa 27167031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 22905319 - 22905435
Alignment:
Q  51 aagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcaca 150  Q
    ||||| ||||||||||| ||||||||||| || ||||||||  || ||||||| |||||||||||||| || ||  ||||||||| ||| |||||  |||    
T  22905319 aagatagaaaatgttcagtatgtagaaggttttaaacacaatctacttagcattagtcaattgtgtgatagtggatttgaagttatatttaaaccaaaca 22905418  T
Q  151 catgcgaagtaagacaa 167  Q
     ||| ||||||||||||    
T  22905419 tatgtgaagtaagacaa 22905435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 22905513 - 22905579
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  22905513 tgaatcatgttttatttctcttgaaaaagataaatggatttggcacaaaagagctggtcatataagt 22905579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 27166953 - 27166887
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  27166953 tgaatcatgttttatttctcttgaaaaagataaatggatttggcacaaaagagctggtcatataagt 27166887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 18654398 - 18654508
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  18654398 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatctttaaacctaacatatgtg 18654497  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  18654498 aagtcagacaa 18654508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 45017530 - 45017640
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||  || |||||| ||| ||| |    
T  45017530 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttatttttaaacctaacatatgtg 45017629  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  45017630 aagtcagacaa 45017640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 9510742 - 9510672
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  9510742 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 9510672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 9510925 - 9510847
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagtta 135  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||    
T  9510925 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagtta 9510847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 18654581 - 18654651
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  18654581 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 18654651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 45017713 - 45017783
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  45017713 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 45017783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 166013 - 166310
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| || ||||| ||||||||     
T  166013 caaaggtaaaggtgttattggtaagataaattctgcaaaaattgaaaatgttcaatatgtggaaggtttaaaacataacttgatcagcataagtcaatta 166112  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    |||||||| ||||||||||| || |||||| |||||||||||||||| | ||||| ||| |||||||||||||| |||||||||||  |||| |||||||    
T  166113 tgtgacagtggtcttgaagtaactttcaaaactcacacatgcgaagttaaacaagaatcctcaggaaaaatcttgtttaccggatcaagaaataaaaatg 166212  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||| ||||| |||||| |||||||| ||||||| || |||||||| || ||||| || |||||||||||||| |||||||||||||||||||||    
T  166213 tttatgttttatatttagattaactccctattgaatcctgttttatatctctagaaaaagacaaatggatttggcacaaaagggctggacatataagt 166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 146; Significance: 7e-77; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 17725 - 18022
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||| || ||||| ||||||||     
T  17725 caaaggtaagggtgttattggtaagataaattttgcaaaaattgaaaatgttcaatatgtggaaggtttaaaacataacttgatcagcataagtcaatta 17824  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    |||||||  ||||||| ||| |  |||||| | |||||||| ||||| | ||||| ||| |||||||||||||| |||||||||||  ||||||||||||    
T  17825 tgtgacaatggtcttgtagtaattttcaaaacccacacatgtgaagttaaacaagaatcctcaggaaaaatcttgtttaccggatcaagaaacaaaaatg 17924  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||| ||||| ||||||||||||| ||||||||| || |||||||| || ||||| || |||||||||||||| ||||||| |||||||||||||    
T  17925 tttatgttttatatttagatgaactccttgttgaatcctgttttatatctctcgaaaaagacaaatggatttggcacaaaagggttggacatataagt 18022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 85500 - 85434
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||| |||||||| || |||||||| || |||||||||||||| ||||||||||| |||||||||    
T  85500 tgaatcttgctttatgtctcttgaaaaagacaaatggatttggcacaaaagggctggtcatataagt 85434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 85703 - 85578
Alignment:
Q  42 aattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattca 141  Q
    |||||||| || || ||||||||||| ||||| ||||| |||||| | ||  || ||||||| |||||||||||||| || ||  ||||||||   || |    
T  85703 aattctgctaatatagaaaatgttcagtatgttgaaggtttaaaatataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtcttta 85604  T
Q  142 aacctcacacatgcgaagtaagacaa 167  Q
    ||||| ||| ||| ||||||||||||    
T  85603 aacctaacatatgtgaagtaagacaa 85578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 118 - 311
Target Start/End: Original strand, 8783 - 8976
Alignment:
Q  118 acagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgttta 217  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||| |||||||||||    
T  8783 acagtggtcttgaagtaatattcaaacctcacacatgcgaagtaagacaaatatcttcaggaaaaatcttatttaccggatcaagaaataaaaatgttta 8882  T
Q  218 tgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
         |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  8883 cactctatagtcagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggatggccatataagt 8976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 6602 - 6695
Alignment:
Q  28 ttattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacag 121  Q
    ||||||||||||||||||| || || ||| ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  6602 ttattggtaagataaattcagctaaaattaaaaatgttcaatacgtagaaggattaaaacataatttaattagcatcagtcaattgtgtgacag 6695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 305
Target Start/End: Complemental strand, 14279300 - 14279009
Alignment:
Q  14 caaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattg 113  Q
    ||||||||| || ||||||||||| |   | ||||| || || ||| ||||||||||||| |||||||||||||||||| || | ||||| ||||||||     
T  14279300 caaaggtaaaggtattattggtaaaaatgactctgctaaaatagaagatgttcaatatgttgaaggattaaaacacaacctactaagcataagtcaatta 14279201  T
Q  114 tgtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatg 213  Q
    |||||||| ||| ||||||| |  || |||||  ||| ||| ||||| | |||||| ||| | |||||||  || || || |  ||| |||| ||||||     
T  14279200 tgtgacagtggttttgaagtaatctttaaacccaacatatgtgaagtcaaacaagtctctactggaaaaaatttcttcactgcctctagaaagaaaaatc 14279101  T
Q  214 tttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
    ||||||| |||| |||||||||  | || | |||| | |||||||| ||| |||| || |||||||||||||| |||||| | |||||||||    
T  14279100 tttatgttttattcttagatgacattccagctgaaacttgctttatgtccattgacaaagataaatggatttgacataaacgagctggacat 14279009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 16158063 - 16158173
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| ||||||||||| || || ||  |||||||||  || |||||| ||| ||| |    
T  16158063 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgcgatagtggatttgaagttatctttaaacctaacatatgtg 16158162  T
Q  157 aagtaagacaa 167  Q
    |||| ||||||    
T  16158163 aagtcagacaa 16158173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 305
Target Start/End: Original strand, 5845 - 6093
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||||||| | |||||||||||||| ||| || | ||||| |||||||| || ||||| ||| ||||||| |  || |||||  ||| ||| |    
T  5845 gaaaatgttcaatatattgaaggattaaaacataacctactaagcataagtcaattatgcgacagtggttttgaagtaatctttaaacccaacatatgtg 5944  T
Q  157 aagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgtttatgtcttatacttagatgaactccctgttgaatcatgctt 256  Q
    |||| | |||||| ||| | |||||||  || || || |  ||| |||| |||||| ||||||| |||| |||||||||  | || | |||| | |||||    
T  5945 aagtcaaacaagtctctactggaaaaaatttcttcactgactctagaaagaaaaatctttatgttttattcttagatgacattccagctgaaacttgctt 6044  T
Q  257 tatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
    ||| ||| |||| || ||||||||||||||||||||| | |||||||||    
T  6045 tatgtccattgacaaagataaatggatttggcataaacgagctggacat 6093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 12725 - 12847
Alignment:
Q  45 tctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaac 144  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||||||||  || ||||||| |||||||| ||||| || ||  ||||||||| ||| ||||    
T  12725 tctgctaagatagaaaatgttcagtatgtagaaggtttaaaacacaatctacttagcataagtcaattatgtgatagtggatttgaagttatatttaaac 12824  T
Q  145 ctcacacatgcgaagtaagacaa 167  Q
    || ||| ||| ||| ||||||||    
T  12825 ctaacatatgtgaaataagacaa 12847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 12925 - 12991
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||| || || || |||||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  12925 tgaatcatgtttcatctctcttgaaaaagataaatggatttggcacaaaagagctggtcatataagt 12991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 148180 - 148302
Alignment:
Q  45 tctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaac 144  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||||||||  || |||| || |||||||||||||| |  ||  ||||||||| ||| ||||    
T  148180 tctgctaagatagaaaatgttcagtatgtagaaggtttaaaacacaatctacttagtataagtcaattgtgtgataatggatttgaagttatatttaaac 148279  T
Q  145 ctcacacatgcgaagtaagacaa 167  Q
    || ||| ||| ||||||||||||    
T  148280 ctaacatatgtgaagtaagacaa 148302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 148380 - 148446
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||| || || || |||||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  148380 tgaatcatgtttcatctctcttgaaaaagataaatggatttggcacaaaagagctggtcatataagt 148446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 33876 - 33808
Alignment:
Q  243 gttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||||| ||| |||||||||    
T  33876 gttgaatcatgttttatgtctcttgaaaaagataaatggatttggcacaaaagggttggtcatataagt 33808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 167
Target Start/End: Complemental strand, 34061 - 33952
Alignment:
Q  58 aaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcga 157  Q
    |||||||||| ||||||||||| || ||||| ||  || ||||||| |||||||| ||||| || ||  ||||||||  ||| |||||| ||| ||| ||    
T  34061 aaaatgttcagtatgtagaaggtttgaaacataatctacttagcataagtcaattatgtgatagtggatttgaagttgtatttaaacctaacatatgtga 33962  T
Q  158 agtaagacaa 167  Q
    | ||||||||    
T  33961 aataagacaa 33952  T

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Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 29112 - 29234
Alignment:
Q  45 tctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaac 144  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||| | ||  || ||||||| |||||||||||||| || ||  ||||||||   || ||||    
T  29112 tctgctaagatagaaaatgttcagtatgtagaaggtttaaaaaataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtctttaaac 29211  T
Q  145 ctcacacatgcgaagtaagacaa 167  Q
    || ||| ||| ||||||||||||    
T  29212 ctaacatatgtgaagtaagacaa 29234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 29312 - 29378
Alignment:
Q  245 tgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataagt 311  Q
    |||||| |||||||| || |||||||| || |||||||||||||| ||||||||||| |||||||||    
T  29312 tgaatcttgctttatgtctcttgaaaaagacaaatggatttggcacaaaagggctggtcatataagt 29378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 149843 - 149965
Alignment:
Q  45 tctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaac 144  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||||| ||  || ||||||| |||||||||||||| || ||  ||||||||   || ||||    
T  149843 tctgctaagatagaaaatgttcagtatgtagaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtctttaaac 149942  T
Q  145 ctcacacatgcgaagtaagacaa 167  Q
     | ||| ||| ||||||||||||    
T  149943 gtaacatatgtgaagtaagacaa 149965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 51744 - 51634
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  ||||||||   || |||||| ||| ||| |    
T  51744 gaaaatgttcagtatgttgaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtctttaaacctaacatatgtg 51645  T
Q  157 aagtaagacaa 167  Q
    |||||||||||    
T  51644 aagtaagacaa 51634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 51561 - 51491
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| |||||||| ||  ||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  51561 cctgctgaatcctgctttatgtctattgaaaaagacaaatggatctggcacaaaagggctggtcatataag 51491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 305
Target Start/End: Original strand, 259607 - 259896
Alignment:
Q  15 aaaggtaagggaattattggtaagataaattctgcaaagattgaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgt 114  Q
    |||||||| || | ||| |||||||  || ||||| || || ||||||||||||||||| ||||| |||||||| ||  || | ||||||| |||||| |    
T  259607 aaaggtaaaggtactatcggtaagaataactctgctaaaatagaaaatgttcaatatgttgaaggtttaaaacataatctactaagcatcactcaattat 259706  T
Q  115 gtgacagcggtcttgaagttacattcaaacctcacacatgcgaagtaagacaagtatcttcaggaaaaatcttatttaccggatctcgaaacaaaaatgt 214  Q
    ||||||| ||  |||||||||  || |||||| ||| ||| ||||| | | ||||  |  || |||| ||  | || || || |||||||  |||||| |    
T  259707 gtgacagtggctttgaagtta-ttttaaacctaacatatgtgaagtcaaagaagtgaccacatgaaatattctcttcactggctctcgaatgaaaaatct 259805  T
Q  215 ttatgtcttatacttagatgaactccctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacat 305  Q
    ||| || ||||   |||||||  | || | |||||| |||||||| ||| |||| || ||||||| ||||||||||||||| |||||||||    
T  259806 ttacgttttatttctagatgacattccagctgaatcttgctttatgtccattgataaagataaattgatttggcataaaagagctggacat 259896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 1224 - 1334
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagttacattcaaacctcacacatgcg 156  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  ||||||||    | |||||| ||| ||| |    
T  1224 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagttgtccttaaacctaacatatgtg 1323  T
Q  157 aagtaagacaa 167  Q
    |||||||||||    
T  1324 aagtaagacaa 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 4547 - 4477
Alignment:
Q  240 cctgttgaatcatgctttatatcccttgaaaaggataaatggatttggcataaaagggctggacatataag 310  Q
    |||| |||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| ||||||||    
T  4547 cctgctgaatcttgttttatgtctcttgaaaaagacaaatggatctggcacaaaagggctggtcatataag 4477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 4728 - 4650
Alignment:
Q  57 gaaaatgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaattgtgtgacagcggtcttgaagtta 135  Q
    ||||||||||| ||||| ||||| |||||||| ||  || ||||||| |||||||||||||| || ||  |||||||||    
T  4728 gaaaatgttcagtatgtggaaggtttaaaacataatctacttagcataagtcaattgtgtgatagtggatttgaagtta 4650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 18683 - 18732
Alignment:
Q  61 atgttcaatatgtagaaggattaaaacacaacttaattagcatcagtcaa 110  Q
    ||||||||||||||||||| |||||||| |||||  | ||||||||||||    
T  18683 atgttcaatatgtagaaggtttaaaacataacttgctaagcatcagtcaa 18732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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