View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14587_low_11 (Length: 296)
Name: NF14587_low_11
Description: NF14587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14587_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 38680840 - 38680611
Alignment:
| Q |
7 |
gagatctcaacaatagtttctcattcacatgtcatgggttcattagaatatggtaaagccaaggttcacccatgaataaacacataacacttaaacaatt |
106 |
Q |
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| T |
38680840 |
gagatctcaacaatagtttctcattcacatgtcatgggttcattagaatatggtaaagccaaggttcacccatgaataaacacataacacttaaacaatt |
38680741 |
T |
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| Q |
107 |
acacaattacttgnnnnnnntgcatgcttacttgacagatctaatctcgtttctattccattttaactcggaacacatcatggaatgtgataaatattca |
206 |
Q |
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| T |
38680740 |
acacaattacttgaaaaaaatgcatgcttacttgacagttctaatctcgtttctattccattttaactccgaacacatcatggaatgtgataaatattca |
38680641 |
T |
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| Q |
207 |
ctccggctctgtttggataagctgaaactaacggaa |
242 |
Q |
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| T |
38680640 |
------ctctgttcggataagctggaactaacggaa |
38680611 |
T |
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