View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14589_low_12 (Length: 309)
Name: NF14589_low_12
Description: NF14589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14589_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 34862088 - 34861799
Alignment:
| Q |
1 |
taaattaaagttaataaatttacaaactttcaagaatttgattcttgatcattattctttcagactaaaatattcacccttttgatcattctttcgtcat |
100 |
Q |
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| T |
34862088 |
taaattaaagttaataaatttacaaacttccaagaatttgattcttgattatcattctttcagactaaaatattcacccttttgatcattctttcgtcat |
34861989 |
T |
|
| Q |
101 |
tgttttattcagggttcaagatcaatacctgaagaagaatcaaaccgattttcaatgacccaagtgagaaaaaattgagttttgaatcgtgggtgattgt |
200 |
Q |
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| T |
34861988 |
tgttttattcagggttcaagatcaatacctgaagaagaatcaaaccgattttcaatgacccaagtgagaaaaaattgagttttgaatcgtgggtgattgt |
34861889 |
T |
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| Q |
201 |
ttattataacatatttggatctagctgttgaaagattgaattttttgttgttttgggattgaagatgaagtcagagtcacttgatcagtg |
290 |
Q |
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| T |
34861888 |
ttattataacatatttggatctagctgttgaaagattgaattttttgttgttttgggattgaagatgaagtcagagtcacttgatcagtg |
34861799 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 26802756 - 26802799
Alignment:
| Q |
2 |
aaattaaagttaataaatttacaaactttcaagaatttgattct |
45 |
Q |
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| T |
26802756 |
aaattaaaggtaataaatttacaaacttttaagaatttgattct |
26802799 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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