View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14589_low_21 (Length: 226)
Name: NF14589_low_21
Description: NF14589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14589_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 7 - 216
Target Start/End: Complemental strand, 39945597 - 39945388
Alignment:
| Q |
7 |
attttgtcattaacaattacttctcacaacgaattctatttgagagcgtcatta---gacaaagtttgtgagatttaaatcctgttttagtaaaactcca |
103 |
Q |
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| T |
39945597 |
attttgtcattaacaattacttctcacaacgaattctatttgagagcgtcattattagacaaagtttgtgagatttaaatcctgttttagtaaaac---a |
39945501 |
T |
|
| Q |
104 |
ataatagctatgcaactactgaaaatatatttttgataaattagattatatgaagaagcaaaccagaaaatggatcaacaccatctctgcattattatta |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39945500 |
ataatagctatgcaactactgaaaatatatttttgataaattagattatatgaagaagcaaaccagaaaatggatcaacaccatctctgcattattatta |
39945401 |
T |
|
| Q |
204 |
aactatagtagaa |
216 |
Q |
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||||||||||||| |
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| T |
39945400 |
aactatagtagaa |
39945388 |
T |
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