View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1458_low_15 (Length: 357)
Name: NF1458_low_15
Description: NF1458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1458_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 16 - 342
Target Start/End: Original strand, 44840995 - 44841333
Alignment:
| Q |
16 |
gatgaaacttcccttattttcagtgccatcttgttcatgttcaataattgtacccaatataatgctcatgttccccggtctatgcaatccttgaacggat |
115 |
Q |
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| T |
44840995 |
gatgaaacttcccttattttcagtgccatcttgttcatgttcaataattgtacccaatataatgctcatgttccccggtctatgcaatccttgaacggat |
44841094 |
T |
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| Q |
116 |
tgagctaatttcgcataaaaagtagttgcaattctttataattttgtcaagtctagattctgaaaccagaaagaaatgcttcatattatcagataattgc |
215 |
Q |
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| T |
44841095 |
tgagctaatttcgcataaaaagtagttgcaattctttataattttgtcaagtctagattctgaaaccagatagaaatgcttcatattatcagataattgc |
44841194 |
T |
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| Q |
216 |
atccaatatttgatcatgttttgtaattg------------aaaggagataatcaacaatagctttaacttggaaaactttcttccaaaattgacacatc |
303 |
Q |
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| T |
44841195 |
atccaatatttgatcatgttttgtaattgaataaccaattaaaaggagataatcaacaatagctttaacttggaaaactttcttccaaaattgacacatc |
44841294 |
T |
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| Q |
304 |
tcgtcgtcctaaacttgaaatgcatgtatccaacaaatt |
342 |
Q |
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| T |
44841295 |
tcgtcgtcctaaacttgaaatgcatgtatccaacaaatt |
44841333 |
T |
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