View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1458_low_22 (Length: 303)
Name: NF1458_low_22
Description: NF1458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1458_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 16 - 285
Target Start/End: Original strand, 6320738 - 6321006
Alignment:
| Q |
16 |
ccctatgtcaagctaacaaaaacgtttatatgactttcaaaatgtttacatcattaaatgatactatacaatatgcattgtcacgtgtgtctaaatgatt |
115 |
Q |
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| T |
6320738 |
ccctatgtcaagctaacaaaaacgtttatatgactttcaaaatgtttacattattaaatgatactatacaatatgcattgtcacgtgtgtctaaatgatt |
6320837 |
T |
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| Q |
116 |
ttttatttcagattgtgatcataacagtgtttatcatttttatgacacaatgcaaacccaaccgtccttcaccaaatgtatataagacaatatcaatcat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
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| T |
6320838 |
ttttatttcagattgtgatcataacagtgtttatcatttttatgacacaatgcaaacccagctgtccttcaccaaatgtatataagacaatatcaatcat |
6320937 |
T |
|
| Q |
216 |
tatcaaagtatcacttatcactaattaaatacttaaataataattacaagttgtaaaacaacacactaag |
285 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
6320938 |
tatcaaagtatcacttatcactaattaaata-ataaataataattacaagttgtaaaacaacacactaag |
6321006 |
T |
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