View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14592_high_2 (Length: 572)

Name: NF14592_high_2
Description: NF14592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14592_high_2
NF14592_high_2
[»] chr1 (35 HSPs)
chr1 (1-555)||(21711736-21712291)
chr1 (1-555)||(21707194-21707748)
chr1 (181-555)||(11945639-11946016)
chr1 (1-180)||(13212815-13212997)
chr1 (1-171)||(21342123-21342296)
chr1 (1-171)||(21346988-21347161)
chr1 (1-147)||(13988893-13989040)
chr1 (1-147)||(15859996-15860144)
chr1 (1-147)||(21475075-21475222)
chr1 (1-147)||(21923279-21923426)
chr1 (1-147)||(40389181-40389329)
chr1 (1-147)||(29776715-29776862)
chr1 (1-141)||(23593729-23593870)
chr1 (1-147)||(29298164-29298310)
chr1 (1-147)||(31612340-31612487)
chr1 (9-147)||(16275351-16275491)
chr1 (1-147)||(21840794-21840941)
chr1 (1-141)||(16361944-16362085)
chr1 (1-147)||(22123055-22123203)
chr1 (1-147)||(45574830-45574978)
chr1 (1-178)||(433039-433217)
chr1 (1-119)||(50210186-50210304)
chr1 (1-81)||(34509810-34509891)
chr1 (1-120)||(27250701-27250820)
chr1 (1-124)||(22532299-22532422)
chr1 (45-131)||(21861531-21861616)
chr1 (1-72)||(20847173-20847245)
chr1 (1-124)||(22468664-22468787)
chr1 (36-131)||(21896217-21896310)
chr1 (162-206)||(13881263-13881308)
chr1 (162-206)||(20345998-20346043)
chr1 (163-206)||(22130712-22130756)
chr1 (45-130)||(35261043-35261124)
chr1 (164-206)||(27653104-27653147)
chr1 (163-206)||(45574688-45574732)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-180)||(85533-85715)
scaffold0001 (1-147)||(501111-501258)
[»] scaffold0247 (2 HSPs)
scaffold0247 (4-189)||(2072-2261)
scaffold0247 (47-178)||(17937-18071)
[»] chr4 (52 HSPs)
chr4 (1-178)||(15367720-15367900)
chr4 (1-178)||(15402733-15402913)
chr4 (1-178)||(15371232-15371412)
chr4 (1-178)||(15373513-15373693)
chr4 (1-178)||(15370048-15370227)
chr4 (1-178)||(16223562-16223742)
chr4 (1-147)||(15355312-15355460)
chr4 (1-147)||(44773075-44773222)
chr4 (1-147)||(12295-12442)
chr4 (1-147)||(15118340-15118487)
chr4 (1-147)||(52312537-52312684)
chr4 (1-147)||(18215262-18215409)
chr4 (1-190)||(44928821-44929015)
chr4 (1-141)||(19242726-19242867)
chr4 (16-147)||(20149871-20150004)
chr4 (1-190)||(44102241-44102433)
chr4 (1-147)||(18239407-18239554)
chr4 (1-147)||(44615315-44615462)
chr4 (4-190)||(21815528-21815717)
chr4 (1-131)||(50222345-50222474)
chr4 (1-147)||(1837497-1837644)
chr4 (1-147)||(3515034-3515181)
chr4 (1-147)||(19618160-19618307)
chr4 (1-147)||(51463856-51464003)
chr4 (1-147)||(14970695-14970842)
chr4 (1-147)||(23803253-23803400)
chr4 (1-147)||(12610977-12611117)
chr4 (1-147)||(7641180-7641317)
chr4 (1-81)||(54798764-54798845)
chr4 (1-124)||(14038678-14038801)
chr4 (1-81)||(14280343-14280423)
chr4 (47-190)||(22353910-22354056)
chr4 (1-124)||(7798804-7798927)
chr4 (1-73)||(8574887-8574958)
chr4 (1-81)||(52873377-52873458)
chr4 (1-119)||(16377496-16377612)
chr4 (1-131)||(7893733-7893863)
chr4 (1-76)||(7088907-7088983)
chr4 (1-120)||(12902787-12902906)
chr4 (1-76)||(22636465-22636541)
chr4 (1-124)||(16270204-16270326)
chr4 (1-76)||(44052859-44052935)
chr4 (1-81)||(23374369-23374450)
chr4 (45-131)||(13812-13897)
chr4 (162-206)||(10056832-10056877)
chr4 (36-81)||(16239980-16240024)
chr4 (1-56)||(3096323-3096379)
chr4 (163-203)||(630553-630594)
chr4 (1-81)||(6899921-6900001)
chr4 (45-131)||(15464892-15464977)
chr4 (162-206)||(17333474-17333519)
chr4 (163-206)||(23803111-23803155)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-189)||(161033-161225)
scaffold0007 (53-189)||(164534-164674)
[»] chr6 (47 HSPs)
chr6 (1-190)||(18456746-18456938)
chr6 (1-147)||(16448514-16448662)
chr6 (1-147)||(12742344-12742491)
chr6 (1-147)||(19005073-19005220)
chr6 (1-147)||(19858907-19859054)
chr6 (1-147)||(24422574-24422721)
chr6 (1-147)||(33861821-33861968)
chr6 (1-147)||(33864305-33864452)
chr6 (1-147)||(1540899-1541046)
chr6 (1-147)||(8055056-8055203)
chr6 (1-147)||(18334580-18334727)
chr6 (1-147)||(22782254-22782401)
chr6 (1-147)||(2291168-2291315)
chr6 (1-147)||(26924628-26924775)
chr6 (1-147)||(34963400-34963547)
chr6 (1-147)||(30676698-30676845)
chr6 (1-127)||(18461906-18462031)
chr6 (1-147)||(20556882-20557027)
chr6 (1-147)||(1595576-1595723)
chr6 (1-147)||(25754836-25754983)
chr6 (1-146)||(25688529-25688675)
chr6 (1-143)||(3852009-3852152)
chr6 (1-147)||(25656656-25656803)
chr6 (1-124)||(29060570-29060693)
chr6 (1-70)||(18821866-18821935)
chr6 (1-97)||(20593803-20593899)
chr6 (1-119)||(25629328-25629446)
chr6 (1-94)||(18409825-18409918)
chr6 (1-81)||(16496274-16496355)
chr6 (1-81)||(17287806-17287887)
chr6 (1-97)||(19303536-19303631)
chr6 (1-76)||(20360975-20361051)
chr6 (1-81)||(20076730-20076810)
chr6 (1-76)||(20638298-20638374)
chr6 (1-131)||(25644350-25644481)
chr6 (1-81)||(22780237-22780318)
chr6 (45-178)||(8227421-8227557)
chr6 (162-206)||(18696681-18696726)
chr6 (162-206)||(18706499-18706544)
chr6 (162-206)||(33443239-33443284)
chr6 (45-128)||(20109213-20109295)
chr6 (162-206)||(15817404-15817449)
chr6 (97-147)||(19847937-19847989)
chr6 (42-82)||(15041559-15041599)
chr6 (163-206)||(23415079-23415123)
chr6 (167-206)||(25619604-25619644)
chr6 (163-206)||(27556837-27556881)
[»] chr3 (65 HSPs)
chr3 (1-175)||(12119683-12119860)
chr3 (1-147)||(8899121-8899268)
chr3 (1-147)||(17463205-17463352)
chr3 (1-147)||(38961879-38962026)
chr3 (1-147)||(45606895-45607042)
chr3 (1-190)||(53070596-53070788)
chr3 (1-147)||(7781335-7781482)
chr3 (1-147)||(17446643-17446790)
chr3 (1-147)||(28848599-28848746)
chr3 (1-147)||(34159353-34159500)
chr3 (1-147)||(55476518-55476665)
chr3 (1-147)||(6469122-6469269)
chr3 (1-147)||(9707595-9707742)
chr3 (1-147)||(10247711-10247858)
chr3 (1-147)||(16282799-16282946)
chr3 (1-147)||(16454269-16454416)
chr3 (1-147)||(41123917-41124061)
chr3 (1-147)||(13151778-13151926)
chr3 (1-147)||(13154243-13154391)
chr3 (1-131)||(15412456-15412586)
chr3 (1-131)||(29172589-29172718)
chr3 (1-141)||(8499545-8499687)
chr3 (1-175)||(17672653-17672829)
chr3 (1-147)||(12567587-12567734)
chr3 (1-147)||(13544052-13544199)
chr3 (1-147)||(50242849-50242996)
chr3 (1-102)||(15977542-15977642)
chr3 (1-147)||(43550466-43550614)
chr3 (1-81)||(55500969-55501049)
chr3 (1-93)||(10557012-10557104)
chr3 (1-81)||(21618476-21618555)
chr3 (1-81)||(36166625-36166704)
chr3 (1-73)||(44494836-44494908)
chr3 (1-81)||(14972884-14972965)
chr3 (1-97)||(40213716-40213811)
chr3 (1-81)||(43840962-43841043)
chr3 (1-124)||(25476353-25476476)
chr3 (1-100)||(42386440-42386539)
chr3 (1-81)||(12399239-12399320)
chr3 (1-81)||(18438564-18438645)
chr3 (1-81)||(26686917-26686998)
chr3 (1-76)||(17487886-17487962)
chr3 (1-76)||(17499368-17499444)
chr3 (1-81)||(23083371-23083452)
chr3 (1-124)||(13442304-13442427)
chr3 (91-190)||(17248184-17248287)
chr3 (1-76)||(20698450-20698526)
chr3 (47-178)||(24340633-24340767)
chr3 (1-70)||(14572619-14572688)
chr3 (45-178)||(22147436-22147571)
chr3 (1-72)||(17737263-17737337)
chr3 (1-124)||(24153177-24153299)
chr3 (9-81)||(14576843-14576915)
chr3 (1-70)||(11424781-11424850)
chr3 (45-178)||(23274762-23274898)
chr3 (45-178)||(37642175-37642311)
chr3 (162-206)||(14966362-14966407)
chr3 (52-178)||(2051110-2051238)
chr3 (162-206)||(324428-324473)
chr3 (162-206)||(52989604-52989649)
chr3 (9-112)||(53301530-53301634)
chr3 (163-206)||(43550324-43550368)
chr3 (162-206)||(21837617-21837662)
chr3 (163-206)||(5223498-5223542)
chr3 (163-206)||(15465269-15465313)
[»] chr5 (42 HSPs)
chr5 (1-147)||(18319021-18319169)
chr5 (1-190)||(11581143-11581334)
chr5 (3-147)||(24067136-24067282)
chr5 (1-147)||(264756-264903)
chr5 (1-189)||(31061095-31061287)
chr5 (1-147)||(29329961-29330108)
chr5 (1-147)||(39245163-39245310)
chr5 (1-147)||(39363411-39363558)
chr5 (1-178)||(36154739-36154915)
chr5 (1-131)||(10732946-10733075)
chr5 (1-131)||(10775681-10775811)
chr5 (1-147)||(20909039-20909186)
chr5 (1-147)||(29346007-29346154)
chr5 (1-147)||(42245353-42245500)
chr5 (1-147)||(29348480-29348627)
chr5 (1-147)||(29350953-29351100)
chr5 (1-147)||(2154601-2154749)
chr5 (1-147)||(20901996-20902144)
chr5 (1-131)||(38619461-38619591)
chr5 (9-147)||(32027428-32027567)
chr5 (1-131)||(23064538-23064668)
chr5 (1-147)||(20917940-20918083)
chr5 (2-97)||(9077983-9078078)
chr5 (1-124)||(23390464-23390587)
chr5 (1-78)||(21997547-21997625)
chr5 (1-81)||(21729074-21729155)
chr5 (1-81)||(21808399-21808480)
chr5 (1-81)||(24529250-24529331)
chr5 (1-81)||(25421562-25421643)
chr5 (1-81)||(25431424-25431505)
chr5 (1-81)||(1096497-1096578)
chr5 (1-76)||(8286857-8286934)
chr5 (30-81)||(20766130-20766180)
chr5 (1-81)||(24493599-24493679)
chr5 (1-81)||(13025341-13025421)
chr5 (1-81)||(13095525-13095605)
chr5 (1-81)||(22075049-22075130)
chr5 (36-81)||(22412250-22412294)
chr5 (163-206)||(30138810-30138854)
chr5 (83-178)||(40725965-40726064)
chr5 (1-70)||(21292992-21293060)
chr5 (1-33)||(20806845-20806877)
[»] chr8 (50 HSPs)
chr8 (1-147)||(19936993-19937141)
chr8 (1-145)||(45290684-45290830)
chr8 (1-190)||(41598215-41598407)
chr8 (1-147)||(1484429-1484576)
chr8 (1-147)||(5853280-5853427)
chr8 (1-147)||(20403254-20403401)
chr8 (1-147)||(14409432-14409579)
chr8 (1-147)||(15203219-15203366)
chr8 (1-178)||(19801338-19801516)
chr8 (1-147)||(22001780-22001927)
chr8 (1-147)||(16413304-16413451)
chr8 (1-147)||(20046183-20046330)
chr8 (1-131)||(15070585-15070715)
chr8 (1-147)||(4483308-4483454)
chr8 (1-147)||(14823800-14823947)
chr8 (1-147)||(19896292-19896442)
chr8 (1-147)||(4542361-4542508)
chr8 (2-147)||(26223947-26224093)
chr8 (4-147)||(25484263-25484400)
chr8 (1-119)||(6759288-6759403)
chr8 (1-81)||(16092352-16092433)
chr8 (1-81)||(26219744-26219823)
chr8 (1-81)||(26225303-26225382)
chr8 (1-81)||(7372808-7372889)
chr8 (1-118)||(28649018-28649135)
chr8 (1-81)||(18818419-18818500)
chr8 (1-81)||(21919010-21919091)
chr8 (1-81)||(23406409-23406490)
chr8 (1-124)||(20536238-20536361)
chr8 (1-124)||(21923896-21924019)
chr8 (1-119)||(22875095-22875212)
chr8 (1-81)||(22626766-22626846)
chr8 (47-178)||(13507995-13508129)
chr8 (1-178)||(13597527-13597708)
chr8 (88-147)||(24486032-24486093)
chr8 (1-70)||(31971287-31971356)
chr8 (162-206)||(22237901-22237946)
chr8 (1-70)||(45131019-45131087)
chr8 (165-206)||(17460934-17460976)
chr8 (45-178)||(17612023-17612156)
chr8 (45-131)||(20498637-20498722)
chr8 (166-206)||(19808244-19808285)
chr8 (1-76)||(18879251-18879322)
chr8 (162-205)||(23943876-23943920)
chr8 (163-206)||(25484121-25484165)
chr8 (162-206)||(20533290-20533335)
chr8 (162-206)||(40492734-40492779)
chr8 (163-206)||(14397744-14397788)
chr8 (1-70)||(16199666-16199735)
chr8 (98-147)||(32810054-32810105)
[»] chr7 (49 HSPs)
chr7 (1-178)||(38898332-38898512)
chr7 (1-147)||(456348-456495)
chr7 (1-147)||(11393275-11393422)
chr7 (1-147)||(11972523-11972670)
chr7 (1-147)||(15376701-15376848)
chr7 (1-147)||(16232547-16232694)
chr7 (1-147)||(18640299-18640446)
chr7 (1-147)||(20385111-20385258)
chr7 (1-147)||(21189583-21189730)
chr7 (1-147)||(27216887-27217034)
chr7 (1-147)||(32125518-32125665)
chr7 (1-147)||(41522944-41523091)
chr7 (1-147)||(41525406-41525553)
chr7 (1-147)||(14949110-14949257)
chr7 (1-147)||(24702265-24702412)
chr7 (1-190)||(44116536-44116728)
chr7 (5-190)||(12756614-12756802)
chr7 (1-131)||(16410086-16410215)
chr7 (1-131)||(13869373-13869503)
chr7 (1-143)||(3386360-3386503)
chr7 (1-147)||(18430739-18430886)
chr7 (1-120)||(24275198-24275316)
chr7 (1-147)||(24704715-24704859)
chr7 (1-147)||(13647355-13647503)
chr7 (1-177)||(17061872-17062050)
chr7 (1-147)||(16213711-16213858)
chr7 (30-147)||(26355971-26356089)
chr7 (30-147)||(26358423-26358541)
chr7 (1-147)||(20110583-20110720)
chr7 (1-101)||(13831400-13831499)
chr7 (3-94)||(48273421-48273512)
chr7 (1-119)||(3564337-3564455)
chr7 (67-147)||(15081937-15082019)
chr7 (1-124)||(38227511-38227633)
chr7 (1-124)||(12698861-12698985)
chr7 (1-124)||(9509219-9509342)
chr7 (1-81)||(10589069-10589150)
chr7 (1-124)||(18456381-18456503)
chr7 (9-81)||(26212034-26212107)
chr7 (1-77)||(15144052-15144128)
chr7 (45-131)||(2280080-2280165)
chr7 (162-206)||(46580557-46580602)
chr7 (45-178)||(19486654-19486790)
chr7 (162-206)||(14273708-14273753)
chr7 (1-70)||(16386268-16386339)
chr7 (164-206)||(16998788-16998831)
chr7 (163-206)||(13647603-13647647)
chr7 (163-206)||(13918407-13918451)
chr7 (163-206)||(25927133-25927177)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-147)||(20774-20921)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-147)||(37848-37995)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-147)||(94438-94585)
scaffold0023 (1-147)||(17428-17575)
scaffold0023 (1-131)||(44481-44611)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-147)||(158438-158585)
[»] chr2 (48 HSPs)
chr2 (1-147)||(18808970-18809117)
chr2 (1-147)||(23709520-23709667)
chr2 (1-147)||(23712001-23712148)
chr2 (1-147)||(24367801-24367948)
chr2 (1-147)||(39682340-39682487)
chr2 (1-147)||(571424-571571)
chr2 (1-147)||(6726022-6726169)
chr2 (1-147)||(21155048-21155195)
chr2 (1-147)||(23130889-23131036)
chr2 (1-147)||(23133356-23133503)
chr2 (1-147)||(23135617-23135764)
chr2 (1-147)||(32039486-32039633)
chr2 (1-147)||(34402510-34402657)
chr2 (1-147)||(24898183-24898331)
chr2 (1-147)||(24900666-24900814)
chr2 (1-147)||(24903143-24903291)
chr2 (1-147)||(24905620-24905768)
chr2 (1-147)||(24908095-24908243)
chr2 (1-131)||(38967401-38967531)
chr2 (1-147)||(26505406-26505553)
chr2 (1-147)||(26507884-26508031)
chr2 (1-147)||(28577126-28577273)
chr2 (1-147)||(32214909-32215056)
chr2 (1-150)||(45029839-45029989)
chr2 (1-147)||(22105439-22105587)
chr2 (1-143)||(43137326-43137469)
chr2 (1-147)||(24529516-24529664)
chr2 (59-147)||(24642844-24642933)
chr2 (1-81)||(23076472-23076553)
chr2 (1-119)||(22337145-22337263)
chr2 (1-174)||(19671860-19672034)
chr2 (1-81)||(23060543-23060624)
chr2 (1-76)||(22731249-22731325)
chr2 (1-52)||(24643034-24643085)
chr2 (1-70)||(38136-38205)
chr2 (1-124)||(22738148-22738270)
chr2 (1-76)||(23285895-23285967)
chr2 (45-131)||(7694-7779)
chr2 (1-81)||(298824-298906)
chr2 (162-206)||(18358616-18358661)
chr2 (1-100)||(23103389-23103486)
chr2 (162-206)||(34874094-34874139)
chr2 (163-206)||(22173675-22173719)
chr2 (162-206)||(21081618-21081663)
chr2 (9-81)||(23660061-23660133)
chr2 (166-206)||(26392579-26392620)
chr2 (162-206)||(27472613-27472658)
chr2 (98-147)||(22173817-22173868)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-190)||(79227-79419)
scaffold0056 (1-119)||(17188-17308)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-147)||(13419-13566)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-147)||(13974-14121)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-178)||(16811-16990)
[»] scaffold0819 (1 HSPs)
scaffold0819 (1-131)||(4241-4371)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-178)||(20336-20513)
scaffold0031 (1-81)||(128781-128861)
[»] scaffold0028 (5 HSPs)
scaffold0028 (1-147)||(134238-134385)
scaffold0028 (1-147)||(136707-136854)
scaffold0028 (1-147)||(139176-139323)
scaffold0028 (1-147)||(144114-144261)
scaffold0028 (1-147)||(141645-141792)
[»] scaffold0761 (1 HSPs)
scaffold0761 (1-178)||(4324-4503)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-147)||(4721-4868)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-147)||(29959-30106)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-147)||(1268-1416)
[»] scaffold0145 (3 HSPs)
scaffold0145 (1-147)||(9776-9924)
scaffold0145 (1-124)||(32972-33094)
scaffold0145 (1-76)||(38791-38866)
[»] scaffold0044 (1 HSPs)
scaffold0044 (4-147)||(40430-40574)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-147)||(10800-10947)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-147)||(9269-9416)
[»] scaffold1439 (2 HSPs)
scaffold1439 (3-147)||(135-280)
scaffold1439 (163-206)||(378-422)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-144)||(11315-11459)
[»] scaffold0037 (3 HSPs)
scaffold0037 (1-147)||(82099-82246)
scaffold0037 (1-131)||(22632-22761)
scaffold0037 (163-204)||(82348-82390)
[»] scaffold0494 (1 HSPs)
scaffold0494 (3-147)||(12237-12382)
[»] scaffold0394 (2 HSPs)
scaffold0394 (23-147)||(12107-12232)
scaffold0394 (166-206)||(12333-12374)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-124)||(22913-23035)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-81)||(116457-116536)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-81)||(44717-44798)
scaffold0122 (1-119)||(26038-26156)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-81)||(16610-16691)
[»] scaffold1128 (1 HSPs)
scaffold1128 (483-555)||(1-73)
[»] scaffold0228 (3 HSPs)
scaffold0228 (8-119)||(4544-4655)
scaffold0228 (8-119)||(12126-12237)
scaffold0228 (8-119)||(22078-22189)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-124)||(39507-39629)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-124)||(75183-75305)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-124)||(1881-2004)
[»] scaffold0327 (1 HSPs)
scaffold0327 (36-119)||(3503-3585)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-81)||(51943-52024)
scaffold0011 (1-120)||(167950-168069)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-120)||(3123-3241)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-76)||(13241-13317)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-119)||(3159-3277)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-81)||(4879-4960)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-120)||(1020-1139)
[»] scaffold0183 (1 HSPs)
scaffold0183 (58-131)||(13092-13164)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-81)||(32967-33047)
scaffold0120 (1-81)||(45958-46038)
scaffold0120 (1-77)||(16143-16220)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-81)||(28444-28525)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-124)||(24270-24394)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-120)||(1982-2101)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-81)||(8509-8590)
[»] scaffold0621 (1 HSPs)
scaffold0621 (1-128)||(8496-8623)
[»] scaffold0503 (2 HSPs)
scaffold0503 (1-50)||(11993-12042)
scaffold0503 (83-174)||(12041-12135)
[»] scaffold0175 (1 HSPs)
scaffold0175 (36-81)||(13158-13203)
[»] scaffold0292 (1 HSPs)
scaffold0292 (1-76)||(3500-3576)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-124)||(6089-6215)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-70)||(11464-11534)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-82)||(39943-40024)
[»] scaffold0075 (1 HSPs)
scaffold0075 (45-131)||(53510-53595)
[»] scaffold0358 (1 HSPs)
scaffold0358 (1-61)||(4742-4803)
[»] scaffold0290 (1 HSPs)
scaffold0290 (162-206)||(353-398)
[»] scaffold0123 (1 HSPs)
scaffold0123 (162-206)||(731-776)
[»] scaffold0107 (1 HSPs)
scaffold0107 (162-206)||(9966-10011)
[»] scaffold0012 (1 HSPs)
scaffold0012 (45-177)||(225482-225616)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-100)||(25926-26024)
scaffold0026 (1-100)||(39888-39986)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-81)||(8543-8620)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-70)||(13527-13596)
[»] scaffold0165 (1 HSPs)
scaffold0165 (45-131)||(27710-27795)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-70)||(15485-15554)
[»] scaffold0780 (1 HSPs)
scaffold0780 (162-206)||(3209-3254)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-190)||(11494-11688)
[»] scaffold0260 (1 HSPs)
scaffold0260 (162-206)||(8321-8366)
[»] scaffold0130 (1 HSPs)
scaffold0130 (51-120)||(27911-27979)
[»] scaffold0125 (1 HSPs)
scaffold0125 (166-206)||(1756-1797)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-141)||(38651-38793)
[»] scaffold0347 (1 HSPs)
scaffold0347 (163-206)||(222-266)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-70)||(32097-32165)
[»] scaffold0081 (1 HSPs)
scaffold0081 (165-206)||(4578-4620)
[»] scaffold1766 (1 HSPs)
scaffold1766 (162-206)||(1328-1373)
[»] scaffold0708 (1 HSPs)
scaffold0708 (162-206)||(2308-2353)
[»] scaffold0561 (1 HSPs)
scaffold0561 (162-206)||(10667-10712)
[»] scaffold0395 (1 HSPs)
scaffold0395 (47-124)||(931-1006)
[»] scaffold0156 (1 HSPs)
scaffold0156 (162-206)||(15933-15978)
[»] scaffold0020 (1 HSPs)
scaffold0020 (162-206)||(169631-169676)
[»] scaffold0556 (1 HSPs)
scaffold0556 (45-81)||(8090-8126)
[»] scaffold0413 (1 HSPs)
scaffold0413 (45-93)||(12643-12690)


Alignment Details
Target: chr1 (Bit Score: 402; Significance: 0; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 1 - 555
Target Start/End: Original strand, 21711736 - 21712291
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  21711736 tcatgcagcttagttaaataacaacaacaacacaatagtatacaaaaaaagcatgacagaataatatcaaatgcaagtcaa-caacgtctcaattattca 21711834  T
Q  101 caaataattcaattaatgcacatacaattat--cacaatataacaacatgaa-tcatcagaaatcagcttcacagatcatcgtaatattatattcaacct 197  Q
    || |||| |||  ||||||  ||||||||||  |||||||||||| ||| || |||||||||||||| ||||||||||||| | ||||||||||||||||    
T  21711835 catataaatcatgtaatgcctatacaattatatcacaatataacatcatcaaatcatcagaaatcagattcacagatcatcatcatattatattcaacct 21711934  T
Q  198 ccattcctaaatttatacatacggtgtgcatataaatatagcaataagttattcattgacatcaaaacaaatacttcatcaatnnnnnnnngtatgcata 297  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||    
T  21711935 tcgttcctaaatttatacatacggtgtgcatataaatatagcaataagttattcattgacatcaaaacaaatacttcatcaataaaaaaa-gtatgcata 21712033  T
Q  298 taattgttccctcaaattagtatcacgatttccaacagttctcaagtaaaaatctaaacataggagtttcattcatttacaaaaagaaattatatacact 397  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21712034 taattgttccctcaaattagtatcacagtttccaacagttttcaagtaaaaatctaaacatacgagtttcattcatttacaaaaagaaattatatacact 21712133  T
Q  398 tgtagctcaattttcatttagatagttatagagatgtatattactttaagagttccattgacaactgtttgaaataaatatacaggatcaattaaggaca 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21712134 tgtagctcaattttcatttagatagttatagagatgtatattactttaagagttccattgataactgtttgaaataaatatacaggatcaattaaggaca 21712233  T
Q  498 aggtaaaatagagagagatcgaaatatagctgaaaagctatcactattagtactatat 555  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  21712234 aggtaaaatagagagagatcggaatatagctgaaaagctatcactattagtagtatat 21712291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 1 - 555
Target Start/End: Original strand, 21707194 - 21707748
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  21707194 tcatgcagcttagttaaataacaacaacaacacaatagtatacaaaaaaagcatgacagaataatatcaaatgcaagtcaa-caacgtctcaattattca 21707292  T
Q  101 caaataattcaattaatgcacatacaattat--cacaatataacaacatgaa-tcatcagaaatcagcttcacagatcatcgtaatattatattcaacct 197  Q
    || |||| |||  ||||||  ||||||||||  |||||||||||| ||| || |||||||||||||| ||||||||||||| | ||||||||||||||||    
T  21707293 catataaatcatgtaatgcctatacaattatatcacaatataacatcatcaaatcatcagaaatcagattcacagatcatcatcatattatattcaacct 21707392  T
Q  198 ccattcctaaatttatacatacggtgtgcatataaatatagcaataagttattcattgacatcaaaacaaatacttcatcaatnnnnnnnngtatgcata 297  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||    
T  21707393 tcgttcctaaatttatacatacggtgtgcatataaatatagcaataagttattcattgacatcaaaacaaatacttcatcaataaaaaaa-gtatgcata 21707491  T
Q  298 taattgttccctcaaattagtatcacgatttccaacagttctcaagtaaaaatctaaacataggagtttcattcatttacaaaaagaaattatatacact 397  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  21707492 taattgttccctcaaattagtatcacagtttccaacagttttcaagtaaaaatctaaacatacgagtttcattcatttacaaaaagaa-ttatatacact 21707590  T
Q  398 tgtagctcaattttcatttagatagttatagagatgtatattactttaagagttccattgacaactgtttgaaataaatatacaggatcaattaaggaca 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21707591 tgtagctcaattttcatttagatagttatagagatgtatattactttaagagttccattgataactgtttgaaataaatatacaggatcaattaaggaca 21707690  T
Q  498 aggtaaaatagagagagatcgaaatatagctgaaaagctatcactattagtactatat 555  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  21707691 aggtaaaatagagagagatcggaatatagctgaaaagctatcactatcagtactatat 21707748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 181 - 555
Target Start/End: Original strand, 11945639 - 11946016
Alignment:
Q  181 aatattatattcaacctccattcctaaatttatacatacggtgtgcatataaatatagcaataagttattcattgacatcaaaacaaatacttcatcaat 280  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945639 aatattatattcaacctccatttctaaatttatacatacggtgtgcatataaatatagcaataagttattcattgacatcaaaacaaatacttcatcaat 11945738  T
Q  281 nnnnnnnngtatgcatataattgttccctcaaattagtatcacgatttccaacagttctcaagtaaaaatctaaacataggagtttcattcatttacaaa 380  Q
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  11945739 aaaaaaaagtatgcatataattgttccctcaaattagtatcacggtttccaacagttctcaagtaaaaatctaaacatacaagtttcattcatttacaaa 11945838  T
Q  381 aagaaattatatacacttgtagctcaattttcatttagatagttatagagatgtatattactttaagagttccattgacaactgtttg----aaataaat 476  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    ||||||||    
T  11945839 aag-aattatatacacttgtagctcaattttcatttagatagttatagagatgtatattactttaagagttccattgataactgtttggaataaataaat 11945937  T
Q  477 atacaggatcaattaaggacaaggtaaaatagagagagatcgaaatatagctgaaaagctatcactattagtactatat 555  Q
    ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  11945938 atagaggatcaattaaggacaaggtaaaatatagagagatcggaatatagctgaaaagctatcactatcagtactatat 11946016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 13212997 - 13212815
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13212997 tcatgcagcttagttaaataacaacagcgacgcaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 13212898  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatcgt 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||  |||||||| |||||| ||||||||||||||||    
T  13212897 caaataattcaattaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcaacttcacagatcatcgt 13212815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21342123 - 21342296
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21342123 tcatgcagcttagttaaataacaacaaagacacagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 21342222  T
Q  101 caaataattcaattaatgcacatacaatt--atcacaatataacaacat-gaatcatcagaaatcagcttcaca 171  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||  |||||||| ||||||||||||||    
T  21342223 caaataattcaattaatgcatatacaattacatcacaatataacaacatcaaatcatcataaatcagcttcaca 21342296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21346988 - 21347161
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21346988 tcatgcagcttagttaaataacaacaaagacacagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 21347087  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcaca 171  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||  |||||||| ||||||||||||||    
T  21347088 caaataattcaattaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcaca 21347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 13988893 - 13989040
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13988893 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 13988991  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  13988992 catataattcaagtaatgcatatacaattatatcacaatataacaacat 13989040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 15860144 - 15859996
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| |||    
T  15860144 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacaacatgacataataatattaaatgcaagtcaatcaacgtcttaattactca 15860045  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  15860044 caaataattcaatcaatgcacatacaattatatcacaatataacaacat 15859996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21475222 - 21475075
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21475222 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 21475124  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  21475123 catataattcaagtaatgcatatacaattatatcacaatataacaacat 21475075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21923426 - 21923279
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21923426 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 21923328  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  21923327 catataattcaagtaatgcatatacaattatatcacaatataacaacat 21923279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 40389181 - 40389329
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40389181 tcatgcaacttggttaaataacaacagcgacacatcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattca 40389280  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||||||||||| |||||||  |||||||||||||||||||    
T  40389281 catataattcaattaatgcatatacaattatatcacaatataacaacat 40389329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29776715 - 29776862
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29776715 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaataacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 29776813  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  29776814 catataattcaagtaatgcatatacaattatatcacaatataacaacat 29776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 23593870 - 23593729
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23593870 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 23593772  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataa 141  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||    
T  23593771 catataattcaagtaatgcatatataattatatcacaatataa 23593729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29298164 - 29298310
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  29298164 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatga-ataataatatcaaatgcaagtcaa-caacgtctcaattattca 29298261  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||||||||| |||||    
T  29298262 catataattcaagtaatgcatatacaattatatcacaatataataacat 29298310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 31612340 - 31612487
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  31612340 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcagttattca 31612438  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  31612439 catataattcaagtaatgcatatacaattatatcacaatataacaacat 31612487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 16275491 - 16275351
Alignment:
Q  9 cttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataat 108  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||    
T  16275491 cttagttaaataacaacaacgacatagcagtatacaaaaacagcatgacataataatatcaattgcaagtcaatcaacgtctcaattattcacataaaat 16275392  T
Q  109 tcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    |||||||||||| |||| ||  |||||||||||||||||||    
T  16275391 tcaattaatgcatataccattatatcacaatataacaacat 16275351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21840794 - 21840941
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21840794 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 21840892  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || |||||| || ||||||| ||| |||  |||||||||||||||||||    
T  21840893 catataatttaagtaatgcatatataattatatcacaatataacaacat 21840941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 16361944 - 16362085
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16361944 tcatgcagcttagttaaataacgacagcaacacaacagtatataaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 16362042  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataa 141  Q
    |||||||||||| ||||||| ||| |||  |||||||||||||    
T  16362043 caaataattcaagtaatgcatatataattatatcacaatataa 16362085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 22123203 - 22123055
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  22123203 tcatgcagcttagttaaatagcaaacagcaacacaacagtatacaaaaatagcatgacataataatatcaaatgcaagtcaa-caatgtctcaattattc 22123105  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    |||  |||||||| ||||||| |||||||  |||||||||||||||||||    
T  22123104 acatttaattcaagtaatgcatatacaattatatcacaatataacaacat 22123055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 45574978 - 45574830
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  |||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||     
T  45574978 tcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataataccaaatgcaagtcaa-caacgtctcaattatta 45574880  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  ||||||||||||| |||||    
T  45574879 acatataattcaagtaatgcatatacaattatatcacaatataagaacat 45574830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 433039 - 433217
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||||||||||||||  ||   |||||  ||||||||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||||    
T  433039 tcatgcagcttagttaaataacggca---acacaggcagtatacaaaaacatcaagacataataatatcaaatgcaagtcaa-caacatctcaattattc 433134  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatat-aacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    ||| ||||||||| ||||||| |||||||  ||||||||||| ||||||||  |||||||| |||||||||| ||||||||||    
T  433135 acatataattcaagtaatgcatatacaattatatcacaatataaacaacatcaaatcatcataaatcagctttacagatcatc 433217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 50210304 - 50210186
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| ||| |    
T  50210304 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacatctcaagtatac 50210206  T
Q  100 acaaataattcaattaatgc 119  Q
    |   ||||||||| ||||||    
T  50210205 attcataattcaagtaatgc 50210186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34509810 - 34509891
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  34509810 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaa 34509891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27250820 - 27250701
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||| ||| ||| |  ||||||||||||||||||||||||||||||||||| ||||| || |||||| ||| || |||||    
T  27250820 tcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc-atcaacatcttaaatattc 27250722  T
Q  100 acaaataattcaattaatgca 120  Q
    | | || |||||| |||||||    
T  27250721 aaatattattcaagtaatgca 27250701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 22532299 - 22532422
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||  ||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||| | ||||| |||| |||| ||| || |||||    
T  22532299 tcatgcaatttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaa-caacatcttaaatattc 22532397  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||||||||| |||||||||||    
T  22532398 attcataattcaagtaatgcacata 22532422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 21861616 - 21861531
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||  ||||| | ||||||||| ||||| | ||||||||||    
T  21861616 aaaacagcatgatataacaatatcaaatgcaagtc-atcaacatctcaaacattcatatataattcaagtaatgtatatacaattat 21861531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20847245 - 20847173
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaat 72  Q
    |||||||||||||||||||||||||||| ||| |  ||||| |||||| |||||||||||||  |||||||||    
T  20847245 tcatgcagcttagttaaataacaacagcaacataggcagtacacaaaatcagcatgacataaatatatcaaat 20847173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 22468787 - 22468664
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||| |||||||||||||||| ||| ||| |  |||  ||||| ||||||||||||| |||||||||| ||||| |||| |||| ||| ||||||||    
T  22468787 tcatgcaacttagttaaataacaatagcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaa-caacatcttaattattc 22468689  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |  ||||  |||| |||||||||||    
T  22468688 aataatatctcaagtaatgcacata 22468664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 21896310 - 21896217
Alignment:
Q  36 cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||||||||||| |||||||| |||| ||||||||||||||||| |||||| ||||||  ||||| | ||||||||  ||||| | ||||||||||    
T  21896310 cagtatacaaaa-cagcatgatataacaatatcaaatgcaagtc-atcaacatctcaaacattcatatataattcatgtaatgtatatacaattat 21896217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 13881308 - 13881263
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  13881308 cagcttcacagatcatcagtaatgttatattcaacctccattccta 13881263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 20345998 - 20346043
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||    
T  20345998 cagcttcaaagatcatcagtaatattatattcaacctccattccta 20346043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 22130756 - 22130712
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  22130756 agcttcacagatcatcagtaatattatattcaacttccattccta 22130712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 35261124 - 35261043
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaatta 130  Q
    |||||||||||| |||| |||||||||||||    ||||||| ||||||  ||||| | ||||||||| ||||||| |||||||||    
T  35261124 aaaacagcatgatataacaatatcaaatgca----aatcaacatctcaaacattcatacataattcaagtaatgcatatacaatta 35261043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 27653147 - 27653104
Alignment:
Q  164 gcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||    
T  27653147 gcttctcagatcatcagtaatattatattcaacctccattccta 27653104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 45574732 - 45574688
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  45574732 agcttcacagatcatcagtaatattatattcaacccacattccta 45574688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 148; Significance: 8e-78; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 85715 - 85533
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  85715 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctgaattattca 85616  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatcgt 180  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  85615 caaataattcaattaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcatcgt 85533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 501111 - 501258
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  501111 tcatgcagcttagttaaataacaacagcaacacagcaatatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 501209  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  501210 catataattcaagtaatgcatatataattatatcacaatataacaacat 501258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 143; Significance: 7e-75; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 2261 - 2072
Alignment:
Q  4 tgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2261 tgcagcttagttaaataacaacagcgacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaattaacgtctcaattattcacaa 2162  T
Q  104 ataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatcg-taatattata 189  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||||    
T  2161 ataattcaattaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcatcgttaatattata 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 18071 - 17937
Alignment:
Q  47 aacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataa-ca 143  Q
    |||| ||||| ||||||||||| || |||||| || |||| |||||| |||||||| ||||||||| ||||||| ||||||||||  |||| ||||| ||    
T  18071 aacatcatgatataataatatcgaacgcaagtaaa-caacatctcaaatattcacatataattcaagtaatgcatatacaattatatcacattataaaca 17973  T
Q  144 acatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    |||| || |||||| |||||||||||||||||||||    
T  17972 acatcaaatcatcataaatcagcttcacagatcatc 17937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 7e-72; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 15367720 - 15367900
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15367720 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15367819  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||| ||| |||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  15367820 catataattcaactaacgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcatc 15367900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 15402733 - 15402913
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15402733 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15402832  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||| ||| |||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  15402833 catataattcaactaacgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcatc 15402913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 15371232 - 15371412
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15371232 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaatgtctcaattattca 15371331  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||| ||| |||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  15371332 catataattcaactaacgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcatc 15371412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 15373513 - 15373693
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15373513 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaatgtctcaattattca 15373612  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||| ||| |||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  15373613 catataattcaactaacgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcatc 15373693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 15370048 - 15370227
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15370048 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15370147  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| | | ||| |||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  15370148 catataattcaact-acgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcatc 15370227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 16223562 - 16223742
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16223562 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatctaatgcaagtcaatcaacgtctcaattattca 16223661  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacatga-atcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| |||  || |||||||  ||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  16223662 catataattcaactaacccatatacaattatatcacaatataacaacatcacatcatcataaatcagcttcacagatcatc 16223742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 15355460 - 15355312
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15355460 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15355361  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||||||||||| |||||||  |||||||||||||||||||    
T  15355360 catataattcaattaatgcatatacaattatatcacaatataacaacat 15355312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 44773222 - 44773075
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44773222 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 44773124  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    |||||||||||| ||||||| |||||||  |||||||||||||||||||    
T  44773123 caaataattcaagtaatgcatatacaattatatcacaatataacaacat 44773075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12442 - 12295
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12442 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 12344  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  12343 catataattcaagtaatgcatatacaattatatcacaatataacaacat 12295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 15118487 - 15118340
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15118487 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 15118389  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  15118388 catataattcaagtaatgcatatacaattatatcacaatataacaacat 15118340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 52312537 - 52312684
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52312537 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 52312635  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  52312636 catataattcaagtaatgcatatacaattatatcacaatataacaacat 52312684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 18215409 - 18215262
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18215409 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 18215311  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  18215310 catataattcaagtaatgcatatacaattatatcacaatataacaacat 18215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 44929015 - 44928821
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  44929015 tcatgcagcttagttaaataacaacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaat-aacatctcaattattc 44928917  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatat-aacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    ||| ||||||||| ||||||| |||||||  ||||||||||| ||||||||  |||||||| |||||||||||||||||||||  |||||||||||    
T  44928916 acatataattcaagtaatgcatatacaattatatcacaatataaacaacataaaatcatcataaatcagcttcacagatcatcattaatattatat 44928821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 19242726 - 19242867
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19242726 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 19242824  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataa 141  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||    
T  19242825 catataattcaagtaatgcatatataattatatcacaatataa 19242867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 20149871 - 20150004
Alignment:
Q  16 aaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaatta 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20149871 aaataacaacagcgacacatcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattcacatataattcaatta 20149970  T
Q  116 atgcacatacaat--tatcacaatataacaacat 147  Q
    ||||| |||||||  |||||||||||||||||||    
T  20149971 atgcatatacaattatatcacaatataacaacat 20150004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 44102241 - 44102433
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||   |||||  |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  44102241 tcatgcagcttagttaaataacaacaataacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagt-aaacaacgtctcaattattca 44102339  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    || ||||||||| ||||||| |||||||  ||||||||||||||| |||  |||||||| |||||||||||||||||||||  |||||||||||    
T  44102340 catataattcaagtaatgcatatacaattatatcacaatataacatcatcaaatcatcataaatcagcttcacagatcatcattaatattatat 44102433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 18239554 - 18239407
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18239554 tcatgcagcttagttaaataacaacagcagcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 18239456  T
Q  101 caaataattcaattaatgcacatacaatt--atcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||||||||  |||||| |||||||||||    
T  18239455 catataattcaagtaatgcatatacaattacatcacagtataacaacat 18239407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 44615315 - 44615462
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44615315 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 44615413  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  44615414 catataattcaagtaatgcatatacaattatatcacagtataacaacat 44615462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 21815717 - 21815528
Alignment:
Q  4 tgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaa 103  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||     
T  21815717 tgcagcttagttaaataacgacagcaacacaactgtatacaaaaacagcatgacataataatataaaatgcaagtcaa-caacgtctcaattattcacat 21815619  T
Q  104 ataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    ||||||||| ||||||| |||||||  ||||| |||||||||||||  ||||| || |||||||||||||| ||||||  |||||||||||    
T  21815618 ataattcaagtaatgcatatacaattatatcataatataacaacatcaaatcaccataaatcagcttcacatatcatcattaatattatat 21815528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 50222474 - 50222345
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50222474 tcatgcagcttagttaaataacaacagcaacacaacattatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 50222376  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || ||||||||| ||||||| ||||||||||    
T  50222375 catataattcaagtaatgcatatacaattat 50222345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1837644 - 1837497
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  1837644 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataataccaaatgcaagtcaa-caacgtctcaattattca 1837546  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||| ||  ||||||| |||||||||||    
T  1837545 catataattcaagtaatgcatatacgattatatcacattataacaacat 1837497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 3515034 - 3515181
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  3515034 tcatgcagcttagttaaaaaacaacagcaacacagcagtatacaaaaacagcaagacataataatatcaaatgcaagtcaa-caacgtctcaattattca 3515132  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  3515133 catataattcaagtaatgcatatataattatatcacaatataacaacat 3515181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 19618307 - 19618160
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19618307 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 19618209  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    |  ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  19618208 cctataattcaagtaatgcatatataattatatcacaatataacaacat 19618160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 51464003 - 51463856
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  51464003 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattca 51463905  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  51463904 catataattcaaataatgcatatataattatatcacaatataacaacat 51463856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14970842 - 14970695
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14970842 tcatgcagcttagttaaataacaacagcaaaacagcaatatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 14970744  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| |||| || ||| |||  |||||||||||||||||||    
T  14970743 catataattcaagtaatacatatataattatatcacaatataacaacat 14970695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 23803400 - 23803253
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  23803400 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctaaattattca 23803302  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  23803301 catataattcaagtaatgcatatataattatatcacaatataacaacat 23803253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12610977 - 12611117
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  12610977 tcatgcagcttagttaaataacaacagcaacacaaca-------aaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattca 12611068  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  12611069 catataattcaagtaatgcatatataattatatcacaatataacaacat 12611117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 7641317 - 7641180
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||          ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |    
T  7641317 tcatgcagcttagttaaataacaacagcaacacaa----------aaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattta 7641229  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  7641228 catataattcaagtaatgcatatacaattatatcacaatataacaacat 7641180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 54798845 - 54798764
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54798845 tcatgcagcttagttgaataacaacagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 54798764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 14038678 - 14038801
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||| |    
T  14038678 tcatgcagcttagttaaataacaacagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaa-caacatctcaattatac 14038776  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||| ||||| |||||||||||    
T  14038777 attcatatttcaagtaatgcacata 14038801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14280343 - 14280423
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  14280343 tcatgcagcttagttaaataacaacagcaacacggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa 14280423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 22353910 - 22354056
Alignment:
Q  47 aacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat--tatcacaatataacaa 144  Q
    |||| |||||||||| |||||||| | ||| |||| |||||||||||||||||||| ||||||||| ||||||| |||||||  ||||||||||||||||    
T  22353910 aacaacatgacataacaatatcaattacaattcaa-caacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacaatataacaa 22354008  T
Q  145 c-atgaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    | || |||||||| ||||||| |||||||||||||  |||||||||||    
T  22354009 caataaatcatcataaatcagtttcacagatcatcattaatattatat 22354056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 7798804 - 7798927
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| || |||||    
T  7798804 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtc-atcaacatcttaaatattc 7798902  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||| ||||| |||||||||||    
T  7798903 aattatacttcaagtaatgcacata 7798927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8574958 - 8574887
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatg 73  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  8574958 tcatgcagcttagttaaataacaacagcgacacaacagtatac-aaaacaacatgacataataatatcaaatg 8574887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 52873458 - 52873377
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  52873458 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaa 52873377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 16377612 - 16377496
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||  ||||||||||||||||||||||||||||||||| |||| |||||||||| |    
T  16377612 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaa--cagcatgacataataatatcaaatgcaagtcaa-caacatctcaattatac 16377516  T
Q  100 acaaataattcaattaatgc 119  Q
    |   ||||||||| ||||||    
T  16377515 attcataattcaagtaatgc 16377496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 7893733 - 7893863
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||| ||| ||| |  ||||||||||||||||||||||||||||||||||| |||||||||| || | ||| || |||||    
T  7893733 tcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaa-catcatcttaaatattc 7893831  T
Q  100 acaaataattcaattaatgcacatacaattat 131  Q
    |   ||| ||||| |||||||||||| |||||    
T  7893832 aattatacttcaagtaatgcacataccattat 7893863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7088907 - 7088983
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| |||||    
T  7088907 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaa 7088983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 12902787 - 12902906
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| || || || |||||| ||| || |||||    
T  12902787 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattc-atcaacatcttaaatattc 12902885  T
Q  100 acaaataattcaattaatgca 120  Q
    | | || |||||| |||||||    
T  12902886 aaatattattcaagtaatgca 12902906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22636465 - 22636541
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||| | ||| | ||||| |||||||||||||||||||||||||||||| |||||    
T  22636465 tcatgcagcttagttaaataacaacaacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaa 22636541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 16270326 - 16270204
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||| ||||||||||| ||| ||| |  |||||||||||| |||||||||||||||||||||||||||||| || |||| ||| || |||||    
T  16270326 tcatgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagttaa-caacatcttaaatattc 16270229  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||| ||||| |||||||||||    
T  16270228 aattatacttcaagtaatgcacata 16270204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44052859 - 44052935
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||| ||||||||||||||| | ||| |  ||||||||||||||||||||||||||||||||||| |||||    
T  44052859 tcatgcagctcagttaaataacaacatcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaa 44052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23374450 - 23374369
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||| |||||||||||||  ||||||| ||||| ||||    
T  23374450 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaa 23374369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 13897 - 13812
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||||| ||||| |||| ||||||||||||||||| |||||| |||||| |||||| | ||||||||| ||||| | ||||||||||    
T  13897 aaaacaacatgatataacaatatcaaatgcaagtc-atcaacatctcaaatattcatatataattcaagtaatgtatatacaattat 13812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 10056832 - 10056877
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  10056832 cagcttcacagatcatcagtaatattatattcaacctccattccta 10056877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 16240024 - 16239980
Alignment:
Q  36 cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  16240024 cagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaa 16239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3096323 - 3096379
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatga 56  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||    
T  3096323 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatga 3096379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 630594 - 630553
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattc 203  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  630594 agcttcacagatcatcagtaatattatattcaacctccattc 630553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6899921 - 6900001
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||| |||||||||||||||| ||| ||| |  |||||||||||| || |||  |||||||||||||||||||||||||    
T  6899921 tcatgcatcttagttaaataacaatagcaacataggcagtatacaaaa-caacatagcataataatatcaaatgcaagtcaa 6900001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 15464977 - 15464892
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||| ||||||| |||| |||||||||||||| |||| |||| ||||||  ||||| | ||||||||| || |||| ||||||||||    
T  15464977 aaaatagcatgatataacaatatcaaatgcaaatcaa-caacatctcaaacattcatatataattcaagtattgcatatacaattat 15464892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 17333474 - 17333519
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  17333474 cagcttcacagaacatcagtattattatattcaacctccattccta 17333519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 23803155 - 23803111
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  23803155 agcttcacagatcatcagtaatattatattcaaccctcattccta 23803111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 161225 - 161033
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  161225 tcatgcagcttagttaaatatcaacagcgacacagcagtatacaaaaacataatgacataataatatcaaatgcaagtcaatcaacatctcaattattca 161126  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatcg-taatattata 189  Q
    |||||||||||||||||||| |||||||  |||||||||||||||| ||  |||||||| |||||||||||||||||||||| ||||||||||    
T  161125 caaataattcaattaatgcatatacaattatatcacaatataacaatatcaaatcatcataaatcagcttcacagatcatcgttaatattata 161033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 164674 - 164534
Alignment:
Q  53 atgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat--tatcacaatataacaacat-ga 149  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||  |    
T  164674 atgacataataatatcaaatgcaagtcaatcaacatctcaattattcacaaataattcaattaatgcatatacaattatatcacaatataacaacatcaa 164575  T
Q  150 atcatcagaaatcagcttcacagatcatcg-taatattata 189  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  164574 atcatcataaatcagcttcacagatcatcgttaatattata 164534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 3e-65; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 18456746 - 18456938
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18456746 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 18456844  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||  |||||||||||    
T  18456845 catataattcaagtaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcatcattaatattatat 18456938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 16448662 - 16448514
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16448662 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 16448563  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||||||||||| |||||||  |||||||||||||||||||    
T  16448562 catataattcaattaatgcatatacaattatatcacaatataacaacat 16448514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12742344 - 12742491
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12742344 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 12742442  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  12742443 catataattcaagtaatgcatatacaattatatcacaatataacaacat 12742491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19005073 - 19005220
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19005073 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 19005171  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  19005172 catataattcaagtaatgcatatacaattatatcacaatataacaacat 19005220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 19859054 - 19858907
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19859054 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 19858956  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  19858955 catataattcaagtaatgcatatacaattatatcacaatataacaacat 19858907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 24422574 - 24422721
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24422574 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 24422672  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  24422673 catataattcaagtaatgcatatacaattatatcacaatataacaacat 24422721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 33861821 - 33861968
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33861821 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 33861919  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  33861920 catataattcaagtaatgcatatacaattatatcacaatataacaacat 33861968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 33864305 - 33864452
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33864305 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 33864403  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  33864404 catataattcaagtaatgcatatacaattatatcacaatataacaacat 33864452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1541046 - 1540899
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1541046 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagtatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 1540948  T
Q  101 caaataattcaattaatgcacatacaatt--atcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||||||||  ||||||||||||||||||    
T  1540947 catataattcaagtaatgcatatacaattacatcacaatataacaacat 1540899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 8055056 - 8055203
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8055056 tcatgcagcttagttaaataacaacagcaacacaaaagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 8055154  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  8055155 catataattcaagtaatgcatatacaattatatcacaatataacaacat 8055203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 18334727 - 18334580
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18334727 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 18334629  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  18334628 catataattcaagtaatgcatatacaattatatcacagtataacaacat 18334580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 22782254 - 22782401
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22782254 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 22782352  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  22782353 cacataattcaagtaatgcatatacaattatatcacaatataacaacat 22782401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 2291315 - 2291168
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2291315 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 2291217  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  2291216 catataattcaagtaatgcatatacaattatatcacagtataacaacat 2291168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 26924775 - 26924628
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26924775 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 26924677  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  26924676 catataattcaagtaatgcatatacaattatatcacagtataacaacat 26924628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 34963400 - 34963547
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34963400 tcatgcaacttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 34963498  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  34963499 catataattcaagtaatgcatatataattatatcacaatataacaacat 34963547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 30676845 - 30676698
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  30676845 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaa-caacgtctcaattattca 30676747  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  30676746 catataattcaagtaatgcatatataattatatcacaatataacaacat 30676698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18461906 - 18462031
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18461906 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 18462004  T
Q  101 caaataattcaattaatgcacatacaa 127  Q
    || ||||||||| ||||||| ||||||    
T  18462005 catataattcaagtaatgcatatacaa 18462031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20557027 - 20556882
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||  ||||    
T  20557027 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatggcataataatatcaaatgcaagtcaa-caacgtctcaat--ttca 20556931  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  20556930 catataattcaagtaatgcatatacaattatatcacaatataacaacat 20556882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1595576 - 1595723
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  1595576 tcatgcagcttagttaaataacaacagcaacataacagtatacaaaaacaacatgacataataatatcaaatgcaattcaa-caacgtctcaattattca 1595674  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||| | |||||||  |||||||||||||||||||    
T  1595675 catataattcaagtaatggatatacaattatatcacaatataacaacat 1595723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 25754836 - 25754983
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25754836 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattca 25754934  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  25754935 catataattcaagtaatgcatatataattatatcacaatataacaacat 25754983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 25688529 - 25688675
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  25688529 tcatgcagcttagttaaataacaacagcaacataacagtatacaaaaacagcatgacataataatatcaactgcaagtcaa-caacgtctcaattattca 25688627  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaaca 146  Q
    || ||||||||| |||| || ||| |||  ||||||||||||||||||    
T  25688628 catataattcaagtaatacatatataatcatatcacaatataacaaca 25688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 3852152 - 3852009
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  3852152 tcatgcagcttagtttaataacaacagcaacacaatagtatacaaaaacagcatgacatgataatataaaatgcaagtcaa-caacgtctcaattattca 3852054  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataaca 143  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||    
T  3852053 catataattcaagtaatgcatatacaattatatcacaatataaca 3852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 25656656 - 25656803
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  25656656 tcatgcagcttagttaaataacaacagcaacatagcagtatacaaaaacagcatgacataataatatcaaatgcaagttaat-aacgtctcaattattca 25656754  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| |||| || ||| |||  ||||||||||||| |||||    
T  25656755 catataattcaactaatacatatataattatatcacaatataaaaacat 25656803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 29060570 - 29060693
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| ||| |    
T  29060570 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacatctcaagtatac 29060668  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||||||||| |||||||||||    
T  29060669 attcataattcaagtaatgcacata 29060693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18821935 - 18821866
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  18821935 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgccataacaatatcaa 18821866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20593803 - 20593899
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattat 97  Q
    |||||||||| |||||||||| |||||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  20593803 tcatgcagctcagttaaataaaaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaattat 20593899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25629446 - 25629328
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||||||||||| |||||||  |||||  |||||||| ||||||||||||||||| ||||||||||||||||||| |||| |||||||||| |    
T  25629446 tcatgcagcttagttaaattacaacaggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtcaa-caacatctcaattatac 25629348  T
Q  100 acaaataattcaattaatgc 119  Q
    |   ||||||||| ||||||    
T  25629347 attcataattcaagtaatgc 25629328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18409918 - 18409825
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaat 94  Q
    |||||||||| ||||||||||||||||| |||||  |||||||| |||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  18409918 tcatgcagctcagttaaataacaacagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaa-caacatctcaat 18409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16496274 - 16496355
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||| |||||||||||||||||||||| ||||| ||||    
T  16496274 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaa 16496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17287887 - 17287806
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |   |||||||||| ||||||||||||||||||||||| ||||||||||    
T  17287887 tcatgcagcttagttaaataacaacagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaa 17287806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 19303631 - 19303536
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaaca-gtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattat 97  Q
    |||||||||||||||||||||||||| | |||||  | |||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||||    
T  19303631 tcatgcagcttagttaaataacaacaacaacacaggaagtatacaaaa-caacatgacataataatatcaaatgcaagtcaa-caacatctcaattat 19303536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20361051 - 20360975
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| ||| |  ||| ||||||||||||||||||||||||||||||| |||||    
T  20361051 tcatgcagcttagttaaataacaacagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaa 20360975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20076730 - 20076810
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||| |||||| |||||||||||||||||||||||||||| ||||    
T  20076730 tcatgcagcttagttaaataacaacagcaacataggcagtaaacaaaa-cagcatgacataataatatcaaatgcaaatcaa 20076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20638374 - 20638298
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||| | ||| |  ||||||||||||||| ||||||||||||||||||| |||||    
T  20638374 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaa 20638298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 25644350 - 25644481
Alignment:
Q  1 tcatgcagcttagttaaataaca-acagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    ||||||||||||||||||||||| ||||| ||| |  |||||| |||||||||| ||| |||| ||||||||||| ||||| |||||| ||||||  |||    
T  25644350 tcatgcagcttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtc-atcaacatctcaaacatt 25644448  T
Q  99 cacaaataattcaattaatgcacatacaattat 131  Q
    || | ||||||||| ||||||  ||||||||||    
T  25644449 catatataattcaagtaatgcgtatacaattat 25644481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22780318 - 22780237
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||||||||||||||   ||| |  || |||||||||||||| ||||||||||||||||| ||||||||||    
T  22780318 tcatgcagcttagttaaataacaacaaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaa 22780237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 8227557 - 8227421
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataa- 141  Q
    |||||| ||||| |||||||||||  | | |||| || |||| |||||| || ||||| ||||||||| ||||||| ||||||||||  |||| |||||     
T  8227557 aaaacatcatgatataataatatcgcacgtaagtaaa-caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaa 8227459  T
Q  142 caacatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    |||||| || |||||| |||||||||||||||||||||    
T  8227458 caacatcaaatcatcataaatcagcttcacagatcatc 8227421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 18696681 - 18696726
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18696681 cagcttcacagatcatcagtaatattatattcaacctccattccta 18696726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 18706499 - 18706544
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18706499 cagcttcacagatcatcagtaatattatattcaacctccattccta 18706544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 33443239 - 33443284
Alignment:
Q  162 cagcttcacagatcatcg-taatattatattcaacctccattccta 206  Q
    |||||||||||||||||  |||||||||||||||||||||||||||    
T  33443239 cagcttcacagatcatcaataatattatattcaacctccattccta 33443284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 20109213 - 20109295
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat 128  Q
    |||||| ||| | |||| ||||||||||||||||| |||||| |||||| |||||| | ||||||||| ||||| | |||||||    
T  20109213 aaaacaacataatataacaatatcaaatgcaagtc-atcaacatctcaaatattcatatataattcaagtaatgtatatacaat 20109295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 15817449 - 15817404
Alignment:
Q  162 cagcttcacagatcatcgt-aatattatattcaacctccattccta 206  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  15817449 cagcttcacagatcatcattaatatcatattcaacctccattccta 15817404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 19847989 - 19847937
Alignment:
Q  97 ttcacaaataattcaattaatgcacatacaattat--cacaatataacaacat 147  Q
    |||||| ||||||||| ||||||| ||||||||||  ||||||||||||||||    
T  19847989 ttcacatataattcaaataatgcatatacaattatatcacaatataacaacat 19847937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 15041599 - 15041559
Alignment:
Q  42 acaaaaacagcatgacataataatatcaaatgcaagtcaat 82  Q
    |||| ||||||||||||| |||||||||||||||| |||||    
T  15041599 acaacaacagcatgacattataatatcaaatgcaattcaat 15041559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 23415079 - 23415123
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  23415079 agcttcacagatcatcagtaatattatattcaacccacattccta 23415123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 25619644 - 25619604
Alignment:
Q  167 tcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  25619644 tcacagatcatcagtaatgttatattcaacctccattccta 25619604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 27556837 - 27556881
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  27556837 agcttcacagatcatcagtaatattatattcaacccacattccta 27556881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 3e-65; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 12119860 - 12119683
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12119860 tcatgcagctttgttaaataacaacagcgacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 12119761  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatc 175  Q
    || |||||  |||||||||| |||||||  |||||||||||||||||||  |||||||| ||||||||||||||||||    
T  12119760 cagataatctaattaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatc 12119683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 8899121 - 8899268
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8899121 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 8899219  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  8899220 catataattcaagtaatgcatatacaattatatcacaatataacaacat 8899268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 17463205 - 17463352
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17463205 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 17463303  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  17463304 catataattcaagtaatgcatatacaattatatcacaatataacaacat 17463352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 38962026 - 38961879
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38962026 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 38961928  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  38961927 catataattcaagtaatgcatatacaattatatcacaatataacaacat 38961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 45607042 - 45606895
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45607042 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 45606944  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  45606943 catataattcaagtaatgcatatacaattatatcacaatataacaacat 45606895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 53070788 - 53070596
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  53070788 tcatgcagcttagttaaataacaacagcaacataacagtatacaaaaacaacaagacataataatatcaaatgcaagtcaa-caacgtctcaattattca 53070690  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    || ||||||||| ||||||| |||||||  ||||||||| |||||||||  |||||||| |||||||||||||| ||||||  |||||||||||    
T  53070689 catataattcaagtaatgcatatacaattatatcacaatctaacaacatcaaatcatcataaatcagcttcacaaatcatcattaatattatat 53070596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 7781482 - 7781335
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  7781482 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattca 7781384  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  7781383 catataattcaagtaatgcatatacaattatatcacaatataacaacat 7781335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17446790 - 17446643
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17446790 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 17446692  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || || |||||| ||||||| |||||||  |||||||||||||||||||    
T  17446691 catatcattcaagtaatgcatatacaattatatcacaatataacaacat 17446643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 28848746 - 28848599
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28848746 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 28848648  T
Q  101 caaataattcaattaatgcacatacaatt--atcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||||||||  |||||| |||||||||||    
T  28848647 catataattcaagtaatgcatatacaattacatcacagtataacaacat 28848599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 34159353 - 34159500
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34159353 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 34159451  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  34159452 catataattcaagtaatgcatatacaattatatcacagtataacaacat 34159500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 55476518 - 55476665
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55476518 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 55476616  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  55476617 catataattcaagtaatgcatatacaattatatcacagtataacaacat 55476665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 6469269 - 6469122
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  6469269 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattagtca 6469171  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || |||||| || ||||||| |||||||  |||||||||||||||||||    
T  6469170 catataattgaagtaatgcatatacaattatatcacaatataacaacat 6469122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 9707742 - 9707595
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  9707742 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatacaagtcaa-caacgtctcaattattca 9707644  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  9707643 catataattcaagtaatgcatatacaattatatcacaatataacaacat 9707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 10247858 - 10247711
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10247858 tcatacagcttagttaaataacaacagcagcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 10247760  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  10247759 catataattcaagtaatgcatatacaattatatcacaatataacaacat 10247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 16282946 - 16282799
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  16282946 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatattgaatgcaagtcaa-caacgtctcaattattca 16282848  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  16282847 catataattcaagtaatgcatatacaattatatcacaatataacaacat 16282799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 16454416 - 16454269
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16454416 tcatgcaacttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 16454318  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  16454317 catataattcaagtaatgcatatacaattatatcacagtataacaacat 16454269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 41123917 - 41124061
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41123917 tcatgcagcttagttaaataacaaca---acacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 41124012  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  41124013 catataattcaagtaatgcatatacaattatatcacaatataacaacat 41124061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 13151926 - 13151778
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13151926 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 13151828  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  13151827 acatataattcaagtaatgcatatacaattatatcacagtataacaacat 13151778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 13154391 - 13154243
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13154391 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 13154293  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  13154292 acatataattcaagtaatgcatatacaattatatcacagtataacaacat 13154243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15412456 - 15412586
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15412456 tcatgcagcttagttaaataacaacagcgacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15412555  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || |||||  |||| ||||| ||||||||||    
T  15412556 cagataatctaattgatgcatatacaattat 15412586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 29172718 - 29172589
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29172718 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 29172620  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || ||||||||| ||||||| ||||||||||    
T  29172619 catataattcaagtaatgcatatacaattat 29172589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 8499545 - 8499687
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8499545 tcatgcagcttagttaaataacaacagcgacacagtagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaatgtctcaattattca 8499644  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataa 141  Q
    || |||||  |||||||||| |||||||  |||||||||||||    
T  8499645 cagataatctaattaatgcatatacaattatatcacaatataa 8499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 17672653 - 17672829
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  17672653 tcatgcagcttagttaaataacaacaacaacatagcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattca 17672751  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatc 175  Q
    || ||||||||| ||||||| ||| |||  ||||||||||||||| |||  |||||||| |||| |||||||||||||    
T  17672752 catataattcaaataatgcatatataattatatcacaatataacatcatcaaatcatcataaataagcttcacagatc 17672829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12567587 - 12567734
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12567587 tcatgcagcttagttaaataacaacagcaacacagcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 12567685  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  12567686 catataattcaagtaatgcatatataattatatcacaatataacaacat 12567734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 13544052 - 13544199
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13544052 tcatgcagcttagttaaataacaacagcaacacagcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 13544150  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  13544151 catataattcaagtaatgcatatataattatatcacaatataacaacat 13544199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 50242849 - 50242996
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  50242849 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacaacatgacataataatatcaaatgcaaatcaa-caacgtctcaattattca 50242947  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  50242948 catataattcaagtaatgcatatataattatatcacaatataacaacat 50242996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15977542 - 15977642
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15977542 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 15977640  T
Q  101 ca 102  Q
    ||    
T  15977641 ca 15977642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 43550614 - 43550466
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||  ||||| ||| |  |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  43550614 tcatgcagcttagttaaataatgacagcaacatatgcagtatgcaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 43550516  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||| | |||||||  |||||||||||||||||||    
T  43550515 acatataattcaagtaatgtatatacaattatatcacaatataacaacat 43550466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 55500969 - 55501049
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55500969 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 55501049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10557012 - 10557104
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaa 93  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  10557012 tcatgcagcttagttaaataacaacagcgacacatcagcatacaaaaacggcatgacataataatatcaaatgcaagccaatcaacatctcaa 10557104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21618476 - 21618555
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21618476 tcatgcagcttagttaaataacaacagcgacacaacagtatac-aaaacagcatgacataataatatcaaatgcaagtcaa 21618555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36166625 - 36166704
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  36166625 tcatgcagcttagttaaataacaacagcgacacagcagtatac-aaaacagcatgacataataatatcaaatgcaagtcaa 36166704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44494836 - 44494908
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatg 73  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  44494836 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacagcataacataataatatcaaatg 44494908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14972884 - 14972965
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14972884 tcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa 14972965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40213811 - 40213716
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattat 97  Q
    ||||| |||||||||||||||||||| | ||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||    
T  40213811 tcatgtagcttagttaaataacaacatcaacacagcagtatacataaacatcatgacataataatatcaaatgcaagtcaa-caacatctcaattat 40213716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43840962 - 43841043
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  43840962 tcatgcagcttagttaaataacaacaacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaa 43841043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 25476476 - 25476353
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||| |||||||||||| ||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| |    
T  25476476 tcatgtagcttagttaaaaaacaacagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaagtatac 25476378  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||||||||| |||||| ||||    
T  25476377 attcataattcaagtaatgcgcata 25476353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 42386440 - 42386539
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||| ||||||||||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||| |||||    
T  42386440 tcatgcagtttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaa-caacatctcaaatattc 42386538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12399239 - 12399320
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||| |||||||||||||||||||||||||||| ||||    
T  12399239 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaa 12399320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18438564 - 18438645
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||| |||||||||||||||||||||| ||| |  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  18438564 tcatgtagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaa 18438645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26686917 - 26686998
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||| | ||| |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  26686917 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaa 26686998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17487886 - 17487962
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||| |||||    
T  17487886 tcatgcagcttagttaaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaa 17487962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17499368 - 17499444
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||| |||||    
T  17499368 tcatgcagcttagttaaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaa 17499444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23083452 - 23083371
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||| ||| ||| |  |||||||||||||||| |||||||||||||||||| ||||||||||    
T  23083452 tcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaa 23083371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 13442304 - 13442427
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||||||||||||||||| || ||| |  ||||||||||||||| ||||||||||||||||||| ||||| || |||||| ||| || |||||    
T  13442304 tcatgcagcttagttaaataacaacggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattc-atcaacatcttaaatattc 13442402  T
Q  100 acaaataattcaattaatgcacata 124  Q
    | | ||  ||||| |||||||||||    
T  13442403 aaatattcttcaagtaatgcacata 13442427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 17248287 - 17248184
Alignment:
Q  91 caattattcacaaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatatt 186  Q
    |||||||||||| ||||||||| ||||||| |||||||  |||||||||||||||||||  |||||||| |||||| ||||||||||||||  |||||||    
T  17248287 caattattcacatataattcaaataatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcatcttcacagatcatctttaatatt 17248188  T
Q  187 atat 190  Q
    ||||    
T  17248187 atat 17248184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20698526 - 20698450
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||| |||||||||||| |||||    
T  20698526 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaa 20698450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 24340767 - 24340633
Alignment:
Q  47 aacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataa-ca 143  Q
    |||| ||||| ||||||||||| || |||||| || |||| |||||| |||||||| ||||||||| ||||||| ||||||||||  |||| ||||| ||    
T  24340767 aacatcatgatataataatatcgaacgcaagtaaa-caacatctcaaatattcacatataattcaagtaatgcatatacaattatatcacattataaaca 24340669  T
Q  144 acatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    |||| || |||||| |||||||||||||||||||||    
T  24340668 acatcaaatcatcataaatcagcttcacagatcatc 24340633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14572619 - 14572688
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||||||    
T  14572619 tcatgcagcttagttaaataacaacagcaacatagacagtatac-aaaacagcatgacataataatatcaa 14572688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 22147571 - 22147436
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataa- 141  Q
    |||||| ||||| |||||||||||  | | |||| || |||| |||||| || ||||| ||||||||| ||||||| ||||||||||  |||| |||||     
T  22147571 aaaacatcatgatataataatatcgcacgtaagtaaa-caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaa 22147473  T
Q  142 caacatgaatcatcagaaatcagcttcacagatcatc 178  Q
    |||||| |||||||| |||||||||||||||||||||    
T  22147472 caacataaatcatcataaatcagcttcacagatcatc 22147436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 17737263 - 17737337
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagta---tacaaaaacagcatgacataataatatcaaat 72  Q
    |||||||||||||||||||||||||||| ||||| || ||   ||||| ||||||||||||||||||||||||||    
T  17737263 tcatgcagcttagttaaataacaacagcaacacagcaatatactacaacaacagcatgacataataatatcaaat 17737337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 24153299 - 24153177
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||| | ||| ||| |   ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| || |||||    
T  24153299 tcatgcagcttagttaaataacgatagcaacataggtagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaa-caacatcttaaatattc 24153202  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||| ||||| |||||||||||    
T  24153201 aattatacttcaaataatgcacata 24153177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 14576915 - 14576843
Alignment:
Q  9 cttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||| ||| | |||||||| || |||||||||||||||||||||||| ||||||||||    
T  14576915 cttagttaaataacaacagcaacatagacagtata-aacaacagcatgacataataatatcaattgcaagtcaa 14576843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11424850 - 11424781
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| ||| |  |||||||| ||||||||||||||||| ||||||||    
T  11424850 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacagcatgacataacaatatcaa 11424781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 178
Target Start/End: Original strand, 23274762 - 23274898
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaatta--tcacaatataa- 141  Q
    |||||| ||||| ||||||||||| || |||||| || |||| |||||| |||||||| ||||||||| ||| | | |||||||||  ||||| |||||     
T  23274762 aaaacatcatgatataataatatcgaacgcaagtaaa-caacatctcaaatattcacatataattcaagtaaagaatatacaattacatcacattataaa 23274860  T
Q  142 caacatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    |||||| || |||||| || ||||||||||||||||||    
T  23274861 caacatcaaatcatcataattcagcttcacagatcatc 23274898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 37642311 - 37642175
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataa- 141  Q
    |||||| ||||| |||||||||||  | | |||| || |||| |||||| || ||||| ||||||||| ||||||| ||||||||||  |||| |||||     
T  37642311 aaaacatcatgatataataatatcgcacgtaagtaaa-caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaa 37642213  T
Q  142 caacatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    |||||| || |||||| |||||||||||||||||||||    
T  37642212 caacatcaaatcatcataaatcagcttcacagatcatc 37642175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 14966362 - 14966407
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  14966362 cagcttcacagatcatcagtaatattatattcaacctccattccta 14966407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 178
Target Start/End: Complemental strand, 2051238 - 2051110
Alignment:
Q  52 catgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat--tatcacaatat-aacaacatg 148  Q
    ||||| |||| |||||||||||||| |||| |||| ||||||  ||||| | ||||||||| ||||||| |||||||  ||||||| ||| ||||||||     
T  2051238 catgatataacaatatcaaatgcaaatcaa-caacatctcaaacattcatatataattcaagtaatgcatatacaattatatcacattataaacaacatc 2051140  T
Q  149 aatcatcagaaatcagcttcacagatcatc 178  Q
    |||||||  | | |||||||||| ||||||    
T  2051139 aatcatcttatagcagcttcacaaatcatc 2051110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 324428 - 324473
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  324428 cagcttcacagatcattagtaatattatattcaacctccattccta 324473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 52989649 - 52989604
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  52989649 cagcttcacagatcatcagtaatattatattcaaccttcattccta 52989604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 53301634 - 53301530
Alignment:
Q  9 cttagttaaataacaa-cagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaata 106  Q
    |||||||||||||||| |||| ||| | ||||||| ||||| || ||||| |||| |||||||||||||||||| ||||  |||||| |||||| | |||    
T  53301634 cttagttaaataacaaacagcaacatagacagtatgcaaaa-caacatgatataacaatatcaaatgcaagtcattcaatatctcaaatattcatatata 53301536  T
Q  107 attcaa 112  Q
    ||||||    
T  53301535 attcaa 53301530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 43550368 - 43550324
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| |||||||||||||||||| |||||||||    
T  43550368 agcttcacagatcatcagtaatattatattcaacccccattccta 43550324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 21837617 - 21837662
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||    
T  21837617 cagcttcactgatcatcagtaatattatattcaacctcaattccta 21837662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 5223498 - 5223542
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  5223498 agcttcacagatcatcagtaatattatattcaacccacattccta 5223542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 15465269 - 15465313
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  15465269 agcttcacagatcatcagtaatattatattcaacccacattccta 15465313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 18319169 - 18319021
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18319169 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 18319070  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||||||||||| |||||||  |||||||||||||||||||    
T  18319069 catataattcaattaatgcatatacaattatatcacaatataacaacat 18319021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 11581334 - 11581143
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11581334 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaat-aacgtctcaattattca 11581236  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacatgaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    |  ||||||||| ||||| | |||||||  ||||||||||||||||||| |||||||| |||||| |||||||||| |||  |||||||||||    
T  11581235 cgtataattcaagtaatgtatatacaattatatcacaatataacaacatcaatcatcataaatcaacttcacagattatcattaatattatat 11581143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 24067136 - 24067282
Alignment:
Q  3 atgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcaca 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24067136 atgcagcttggttaaataacaacagcgacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcatcgtctcaattattcaca 24067235  T
Q  103 aataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
     ||||||||||||||||| |||||||  |||||||||||||||||||    
T  24067236 tataattcaattaatgcatatacaattatatcacaatataacaacat 24067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 264903 - 264756
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  264903 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 264805  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  264804 catataattcaagtaatgcatatacaattatatcacaatataacaacat 264756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 31061095 - 31061287
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||| |||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31061095 tcatgcaacttagttaaataacaacagcaaaacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtatcaattattca 31061194  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatcg-taatattata 189  Q
    ||||||||| |||||||||| ||| |||  |||||||||||||||||||  ||||| || ||||||||||| |||||||||| ||||||||||    
T  31061195 caaataatttaattaatgcatataaaattatatcacaatataacaacatcaaatcaccataaatcagcttcgcagatcatcgttaatattata 31061287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29329961 - 29330108
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29329961 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 29330059  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  29330060 catataattcaagtaatgcatatacaattatatcacaatataacaacat 29330108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39245163 - 39245310
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  39245163 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaat-aacgtcccaattattca 39245261  T
Q  101 caaataattcaattaatgcacatacaatt--atcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||||||||  ||||||||||||||||||    
T  39245262 catataattcaagtaatgcatatacaattacatcacaatataacaacat 39245310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39363411 - 39363558
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39363411 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 39363509  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  39363510 catataattcaagtaatgcatatacaattatatcacagtataacaacat 39363558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 36154915 - 36154739
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36154915 tcatgcagcttagttaaataacaaca---acacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 36154820  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||||||| |||||||  ||||||||||||||| |||  |||||||| |||||||||||||| ||||||    
T  36154819 catataattcaagtaatgcatatacaattatatcacaatataacatcatcaaatcatcataaatcagcttcacatatcatc 36154739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10733075 - 10732946
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10733075 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 10732977  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || ||||||||| ||||||| ||||||||||    
T  10732976 catataattcaagtaatgcatatacaattat 10732946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10775811 - 10775681
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10775811 tcatgcagcttagttaaataacgacagcgacacagcagtatataaaaccagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 10775712  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || ||||||||||||||||| ||||||||||    
T  10775711 catataattcaattaatgcatatacaattat 10775681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 20909039 - 20909186
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20909039 tcatgcagcttagttaaataacaaaagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 20909137  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  20909138 catataattcaagtaatgcatatacaattatatcacagtataacaacat 20909186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29346007 - 29346154
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29346007 tcatacagcttagttaaataacaacagcatcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 29346105  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  29346106 catataattcaagtaatgcatatacaattatatcacaatataacaacat 29346154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 42245500 - 42245353
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42245500 tcatgcaacttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 42245402  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  42245401 catataattcaagtaatgcatatacaattatatcacagtataacaacat 42245353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29348480 - 29348627
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||| |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29348480 tcatacagcttagttaaataagaacagcatcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 29348578  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  29348579 catataattcaagtaatgcatatacaattatatcacaatataacaacat 29348627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29350953 - 29351100
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||| |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29350953 tcatacagcttagttaaataagaacagcatcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 29351051  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  29351052 catataattcaagtaatgcatatacaattatatcacaatataacaacat 29351100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 2154749 - 2154601
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaatta-ttc 99  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||    
T  2154749 tcatgcagcttagttaaataacaatagcaacacaacagtatacaaaaacagcatgacataataatatcaactgcaagtcaa-caacgtctcaattatttc 2154651  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  2154650 acatataattcaaataatgcatatacaattatatcacaatataacaacat 2154601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20902144 - 20901996
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaatta-ttc 99  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||    
T  20902144 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaagtgcaagtcaa-caacgtctcaattatttc 20902046  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  20902045 acatataattcaaataatgcatatacaattatatcacaatataacaacat 20901996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 38619461 - 38619591
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38619461 tcatgcagcttagttaaataacaacaacgacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 38619560  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || |||||  |||| ||||| ||||||||||    
T  38619561 cagataatctaattgatgcatatacaattat 38619591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 32027428 - 32027567
Alignment:
Q  9 cttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataat 108  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||    
T  32027428 cttagttaaataacaacaacaacacaacagtatacaaaaacagcatgacataataatatcaaatccaagtcaa-caacgtctcaattattcacatataat 32027526  T
Q  109 tcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    |||| ||||||| |||||||  |||||||||||||||||||    
T  32027527 tcaagtaatgcatatacaattatatcacaatataacaacat 32027567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 23064538 - 23064668
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23064538 tcatgcagcttagttaaataacaacaacgacacagtagtatacaaaaacagcatgacctaataatatcaaatgcaagtcaatcaacgtctcaattattca 23064637  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || |||||  |||| ||||| ||||||||||    
T  23064638 cagataatctaattgatgcatatacaattat 23064668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20918083 - 20917940
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||    ||||||| ||||||||||||||||||    
T  20918083 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacaaaataatataaa----aagtcaa-caacgtctcaattattca 20917989  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||  |||||||| ||| ||| ||| |||  |||||||||||||||||||    
T  20917988 catctaattcaagtaaagcatatataattatatcacaatataacaacat 20917940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 9077983 - 9078078
Alignment:
Q  2 catgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattat 97  Q
    ||||||||||||||||||||||||||| ||| |  |||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  9077983 catgcagcttagttaaataacaacagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaa-caacatctcaattat 9078078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23390587 - 23390464
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||||||||||||||| ||||| || |||||| ||| || |||||    
T  23390587 tcatgcagcttagttaaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattc-atcaacatcttaaatattc 23390489  T
Q  100 acaaataattcaattaatgcacata 124  Q
    | | ||  ||||| |||||||||||    
T  23390488 aaatattcttcaagtaatgcacata 23390464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21997625 - 21997547
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagt 78  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||| |||||||||||||||||||||||||||    
T  21997625 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagt 21997547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21729155 - 21729074
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||| |||||||||||||||||||||| ||||| ||||    
T  21729155 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaa 21729074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21808480 - 21808399
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||| |||||||||||||||||||||| ||||| ||||    
T  21808480 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaa 21808399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24529250 - 24529331
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||| | ||| |  ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  24529250 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaa 24529331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25421562 - 25421643
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||| | ||| |  ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  25421562 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaa 25421643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25431424 - 25431505
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||| |||||||||||||||||||| ||| |  ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  25431424 tcatgcatcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaa 25431505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1096497 - 1096578
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| |||||   ||||| |||||||| ||| ||||||||||||||||||||| ||||    
T  1096497 tcatgcagcttagttaaataacaacagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaa 1096578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8286934 - 8286857
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaa-cagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||| |||||||||||||||||||||| |||||    
T  8286934 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaa 8286857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 20766180 - 20766130
Alignment:
Q  30 acacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20766180 acacaacagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaa 20766130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24493599 - 24493679
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||| ||||| |||||| ||| ||| |  |||||||||||| |||||||||||||||||||||||||||||||||    
T  24493599 tcatgcagcttggttaagtaacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaa 24493679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13025341 - 13025421
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||| |||||||||||||| ||| ||| |  |||||||||||| |||||||||||| | ||||||||||||||||||    
T  13025341 tcatgcagcatagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacatattgatatcaaatgcaagtcaa 13025421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13095525 - 13095605
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||| |||||||||||||| ||| ||| |  |||||||||||| |||||||||||| | ||||||||||||||||||    
T  13095525 tcatgcagcatagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacatattgatatcaaatgcaagtcaa 13095605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22075049 - 22075130
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaaca-gtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||| ||||||||||||||||||||||| ||| |  | |||||||||| || ||||||||||||||||||| ||||| ||||    
T  22075049 tcattcagcttagttaaataacaacagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaa 22075130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22412250 - 22412294
Alignment:
Q  36 cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  22412250 cagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaa 22412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 30138854 - 30138810
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  30138854 agcttcacagatcatcagtaatattatattcaacctccattccta 30138810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 178
Target Start/End: Original strand, 40725965 - 40726064
Alignment:
Q  83 caacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataa-caacatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    |||| |||||| || ||||| ||||||||| ||||||| ||||||||||  |||| ||||| |||||| || |||||| |||||||||||||||||||||    
T  40725965 caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcatcataaatcagcttcacagatcatc 40726064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21293060 - 21292992
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| ||| |  ||||| ||  |||||| ||||||||||||||||||    
T  21293060 tcatgcagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 21292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20806877 - 20806845
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacac 33  Q
    |||||||||||| ||||||||||||||||||||    
T  20806877 tcatgcagcttaattaaataacaacagcgacac 20806845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 3e-62; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 19937141 - 19936993
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  19937141 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataagatcaaatgcaagtcaatcaacgtctcaattactca 19937042  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||||||||||||| |||||||||||| |  |||||||||||||||||||    
T  19937041 caaataattcaatcaatgcacatacagttatatcacaatataacaacat 19936993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 45290830 - 45290684
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  45290830 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgtaagccaatcaacgtctcaattattca 45290731  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaac 145  Q
    || ||||||||||||||||| |||||||  ||||||| |||||||||    
T  45290730 catataattcaattaatgcagatacaattatatcacagtataacaac 45290684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 41598215 - 41598407
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41598215 tcatgcagcttagttgaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 41598313  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||  |||||||| ||||||| |||||||||||||  |||||||||||    
T  41598314 catataattcaagtaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagtttcacagatcatcattaatattatat 41598407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1484429 - 1484576
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1484429 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 1484527  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  1484528 catataattcaagtaatgcatatacaattatatcacaatataacaacat 1484576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 5853427 - 5853280
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5853427 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 5853329  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  5853328 catataattcaagtaatgcatatacaattatatcacaatataacaacat 5853280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 20403254 - 20403401
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20403254 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 20403352  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  20403353 catataattcaagtaatgcatatacaattatatcacaatataacaacat 20403401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14409579 - 14409432
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14409579 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 14409481  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  14409480 catataattcaagtaatgcatatacaattatatcacaatataacaacat 14409432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 15203366 - 15203219
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  15203366 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgtaagtcaa-caacgtctcaattattca 15203268  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  15203267 catataattcaagtaatgcatatacaattatatcacaatataacaacat 15203219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 19801516 - 19801338
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  19801516 tcatgcagcttagttaaataacaatagcaacacaacagtatac-aaaacagcatgacataataatatcaaacgcaagtcaa-caacgtctcaattattca 19801419  T
Q  101 caaataattcaattaatgcacatacaattat--cacaatataacaacatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||||||| ||||||||||  |||||||||||||||| || |||||  |||||||||||||||||||||    
T  19801418 catataattcaagtaatgcatatacaattataacacaatataacaacatcaagtcatcgtaaatcagcttcacagatcatc 19801338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 22001780 - 22001927
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22001780 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 22001878  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  22001879 catataattcaagtaatgcatatacaattatatcacagtataacaacat 22001927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 16413451 - 16413304
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16413451 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 16413353  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  16413352 catataattcaagtaatgcatatataattatatcacaatataacaacat 16413304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20046330 - 20046183
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20046330 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattta 20046232  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  20046231 catataattcaagtaatgcatatacaattatatcacaatataacaacat 20046183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15070585 - 15070715
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15070585 tcatgcagcttagttaaataacaacagcgacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15070684  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || |||||  |||| ||||| ||||||||||    
T  15070685 cagataatctaattgatgcatatacaattat 15070715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 4483308 - 4483454
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4483308 tcatgcagcttagttaa-taacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 4483405  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  4483406 catataattcaagtaatgcatatacaattatatcacagtataacaacat 4483454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 14823800 - 14823947
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||  ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14823800 tcatgcagcaaagttaaataacaacaacaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 14823898  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  14823899 catataattcaagtaatgcatatacaattatatcacaatataacaacat 14823947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19896292 - 19896442
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgac---ataataatatcaaatgcaagtcaatcaacgtctcaattat 97  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||    
T  19896292 tcatgcagcttagttaaataacaacagcaacacaacggtatacaaaaacagcatgacataataataatatcaaatgcaagtcaa-caacgtctcaattat 19896390  T
Q  98 tcacaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||||| ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  19896391 tcacatataattcaagtaatgcatatacaattatatcacaatataacaacat 19896442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 4542508 - 4542361
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4542508 tcatgcagcttagttaaataacaacagcaacacaacaagatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 4542410  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||| ||||| ||||||| |||||||  ||||||| |||||||||||    
T  4542409 catatagttcaagtaatgcatatacaattatatcacagtataacaacat 4542361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 26223947 - 26224093
Alignment:
Q  2 catgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcac 101  Q
    ||||||||||| ||||||||||||||| | | | || |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  26223947 catgcagcttaattaaataacaacagcaataaagcaatatacaaaaatagcatgacataataatatcaaatgcaagtcaa-caacatctcaattattcac 26224045  T
Q  102 aaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    | |||||| |||||||||| |||||||  |||||||||||||||||||    
T  26224046 atataatttaattaatgcatatacaattatatcacaatataacaacat 26224093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 25484400 - 25484263
Alignment:
Q  4 tgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaa 103  Q
    ||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||     
T  25484400 tgcagcttagttaaataacaacagcta-------gtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattcacat 25484309  T
Q  104 ataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||||||||| ||||||| |||||||  ||||||||||||| |||||    
T  25484308 ataattcaagtaatgcatatacaattatatcacaatataataacat 25484263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6759288 - 6759403
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||    ||||| |||||||||| |    
T  6759288 tcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaag----tcaacatctcaattatac 6759383  T
Q  100 acaaataattcaattaatgc 119  Q
    ||  ||||||||||||||||    
T  6759384 actcataattcaattaatgc 6759403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16092433 - 16092352
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  16092433 tcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 16092352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26219744 - 26219823
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||| || |||||||||||||||||||||||||||||    
T  26219744 tcatgcagcttagttaaataacaacagcgacacagcagtatac-aaaatagtatgacataataatatcaaatgcaagtcaa 26219823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26225382 - 26225303
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||    
T  26225382 tcatgcagcttagttaaataacaacagcgacacaacaatatac-aaaacagtatgacataataatatcaaatacaagtcaa 26225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7372808 - 7372889
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  7372808 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaa 7372889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28649135 - 28649018
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||| ||| ||| |  |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |    
T  28649135 tcatgcagcttagttaaataacaaaagcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaa-caacatcttaattatac 28649037  T
Q  100 acaaataattcaattaatg 118  Q
    |   ||||||||| |||||    
T  28649036 attcataattcaagtaatg 28649018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18818500 - 18818419
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| || |||||||    
T  18818500 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaa 18818419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21919091 - 21919010
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  21919091 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaa 21919010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23406409 - 23406490
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  23406409 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaa 23406490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 20536238 - 20536361
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||  ||| |  ||||||||||||||||||||||||||||||||||| ||||| || |||||| ||| || |||||    
T  20536238 tcatgcagcttagttaaataacaacagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattc-atcaacatcttaaatattc 20536336  T
Q  100 acaaataattcaattaatgcacata 124  Q
    | | ||  ||||| |||||||||||    
T  20536337 aaatattcttcaagtaatgcacata 20536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 21924019 - 21923896
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  |||| |||||||||| |||||||| |||||||||| |||||||||| |||| ||| || |||||    
T  21924019 tcatgcagcttagttaaataacaacagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaa-caacatcttaaatattc 21923921  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||| ||||| |||||||||||    
T  21923920 aattatacttcaagtaatgcacata 21923896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 22875095 - 22875212
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||| || |||| |||||  |||||||||||| || |||||||||||||||||||||||||||||| |||| |||||| ||| |    
T  22875095 tcatgcagcttagttaaatagcagcagcaacacaggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaa-caacatctcaaatatac 22875192  T
Q  100 acaaataattcaattaatgc 119  Q
    |   ||||||||| ||||||    
T  22875193 attcataattcaagtaatgc 22875212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22626766 - 22626846
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  22626766 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacaacatgacataataatatcaaatacaaatcaa 22626846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 13508129 - 13507995
Alignment:
Q  47 aacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataa-ca 143  Q
    |||| ||||| ||||||||||| || |||||| || |||| |||||| |||||||| ||||||||| ||||||| ||||||||||  |||| ||||| ||    
T  13508129 aacatcatgatataataatatcgaacgcaagtaaa-caacatctcaaatattcacatataattcaagtaatgcatatacaattatatcacattataaaca 13508031  T
Q  144 acatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    |||| || |||||| || |||| |||||||||||||    
T  13508030 acatcaaatcatcataattcagtttcacagatcatc 13507995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 13597708 - 13597527
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    ||||||||||||||||| |||||| |||| ||| || ||| || | |||||| ||||| ||||||||||| || |||||| || |||| || ||| ||||    
T  13597708 tcatgcagcttagttaattaacaatcagcaacataagcagaatgc-aaaacatcatgatataataatatcgaacgcaagt-aaacaacatcccaaatatt 13597611  T
Q  99 cacaaataattcaattaatgcacatacaat--tatcacaatat-aacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    |||| ||||||||| ||||||| |||||||  ||||||| ||| ||||||||  |||||||| || |||| |||||||||||||    
T  13597610 cacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcatcataattcagtttcacagatcatc 13597527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 24486093 - 24486032
Alignment:
Q  88 tctcaattattcacaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||||||||||||||| ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  24486093 tctcaattattcacatataattcaagtaatgcatatacaattatatcacaatataacaacat 24486032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31971287 - 31971356
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| ||| |  |||||||| |||||| |||||||||||||||||||    
T  31971287 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacaacatgacataataatatcaa 31971356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 22237946 - 22237901
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  22237946 cagcttcacagatcatcagtaatattatattcaacctccattccta 22237901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45131087 - 45131019
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| ||| |  ||||| ||  |||||||||||||||||||||||||    
T  45131087 tcatgcagcttagttaaataacaacagcaacataggcagtaaac--aaacagcatgacataataatatcaa 45131019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 17460976 - 17460934
Alignment:
Q  165 cttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  17460976 cttcacagatcatcagtaatattatattcaacctccattccta 17460934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 17612156 - 17612023
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataac 142  Q
    |||||| ||||| |||||||||||  | | |||| || |||| |||||| || ||||| ||||||||| ||||||| ||||||||||  |||| |||||     
T  17612156 aaaacatcatgatataataatatcgcacgtaagtaaa-caacatctcaaataatcacatataattcaagtaatgcatatacaattatatcacattataa- 17612059  T
Q  143 aacatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
     |||| || |||||| |||||||||||||||||||||    
T  17612058 -acatcaaatcatcataaatcagcttcacagatcatc 17612023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 20498637 - 20498722
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||| ||||||| |||| ||||||||||||||||| |||||| ||||||  ||||| | ||||||||| ||||| | ||||||||||    
T  20498637 aaaatagcatgatataacaatatcaaatgcaagtc-atcaacatctcaaacattcatatataattcaagtaatgtatatacaattat 20498722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 19808285 - 19808244
Alignment:
Q  166 ttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  19808285 ttcacagatcatcagtaatattatattcaacctccattccta 19808244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18879322 - 18879251
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||||||     ||||||||||||||| |||||    
T  18879322 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaca-----acataataatatcaattgcaa 18879251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 23943920 - 23943876
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattcct 205  Q
    |||||||||||| |||| |||||||||||||||||||||||||||    
T  23943920 cagcttcacagaacatcagtaatattatattcaacctccattcct 23943876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 25484165 - 25484121
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| |||||||||||||||||| |||||||||    
T  25484165 agcttcacagatcatcagtaatattatattcaacccccattccta 25484121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 20533335 - 20533290
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||    
T  20533335 cagcttcacagaacatcagtaatgttatattcaacctccattccta 20533290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 40492779 - 40492734
Alignment:
Q  162 cagcttcacagatcatcgt-aatattatattcaacctccattccta 206  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||    
T  40492779 cagcttcacagatcatcattaatattatatacaacctccattccta 40492734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 14397788 - 14397744
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  14397788 agcttcacagatcatcagtaatattatattcaacccacattccta 14397744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16199735 - 16199666
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||| |||||| ||| | ||||||| |  ||||| |||||||||||||||||||    
T  16199735 tcatgcagcttagttaaataacaaacagcaacatagacagtattc--aaacaacatgacataataatatcaa 16199666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 32810054 - 32810105
Alignment:
Q  98 tcacaaataattcaattaatgcacatacaattat--cacaatataacaacat 147  Q
    ||||| ||||||||| ||||||| ||||||||||  ||||||||||||||||    
T  32810054 tcacatataattcaagtaatgcatatacaattatatcacaatataacaacat 32810105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 3e-62; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 38898512 - 38898332
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38898512 tcatgcagcttagttaaataacaacaacgacacagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaatcaacatctcaattattca 38898413  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    |||||||||||||||||||| |||||||  ||||||| ||||||||| |  |||||||| ||||||||||| |||||||||    
T  38898412 caaataattcaattaatgcatatacaattatatcacagtataacaacgtcaaatcatcataaatcagcttcgcagatcatc 38898332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 456348 - 456495
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  456348 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 456446  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  456447 catataattcaagtaatgcatatacaattatatcacaatataacaacat 456495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 11393422 - 11393275
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11393422 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 11393324  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  11393323 catataattcaagtaatgcatatacaattatatcacaatataacaacat 11393275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 11972523 - 11972670
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11972523 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 11972621  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  11972622 catataattcaagtaatgcatatacaattatatcacaatataacaacat 11972670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 15376848 - 15376701
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15376848 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 15376750  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  15376749 catataattcaagtaatgcatatacaattatatcacaatataacaacat 15376701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16232547 - 16232694
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16232547 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 16232645  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  16232646 catataattcaagtaatgcatatacaattatatcacaatataacaacat 16232694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 18640299 - 18640446
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18640299 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 18640397  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  18640398 catataattcaagtaatgcatatacaattatatcacaatataacaacat 18640446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20385258 - 20385111
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20385258 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 20385160  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  20385159 catataattcaagtaatgcatatacaattatatcacaatataacaacat 20385111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21189730 - 21189583
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21189730 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 21189632  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  21189631 catataattcaagtaatgcatatacaattatatcacaatataacaacat 21189583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 27216887 - 27217034
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27216887 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 27216985  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  27216986 catataattcaagtaatgcatatacaattatatcacaatataacaacat 27217034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 32125518 - 32125665
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32125518 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 32125616  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  32125617 catataattcaagtaatgcatatacaattatatcacaatataacaacat 32125665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 41522944 - 41523091
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41522944 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 41523042  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  41523043 catataattcaagtaatgcatatacaattatatcacaatataacaacat 41523091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 41525406 - 41525553
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41525406 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 41525504  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  41525505 catataattcaagtaatgcatatacaattatatcacaatataacaacat 41525553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14949257 - 14949110
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14949257 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 14949159  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  14949158 catataattcaagtaatgcatatacaattatatcacagtataacaacat 14949110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 24702265 - 24702412
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24702265 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 24702363  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  24702364 catataattcaagtaatgcatatacaattatatcacaatataacaacat 24702412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 44116536 - 44116728
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44116536 tcatgcagcttggttaaataacaacagcaacacagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 44116634  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    || |||||||||  |||||| |||||||  |||||||||||||||||||  |||||||| ||||||| |||||| ||||||  |||||||||||    
T  44116635 catataattcaagcaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagtttcacatatcatcattaatattatat 44116728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 12756802 - 12756614
Alignment:
Q  5 gcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaa 104  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||| |    
T  12756802 gcagtttagttaaataacaacagcaacacaacaatatacaaaaacaacatgacataataatatcaaatgcaagt-aaacaacgtctcaattattcacata 12756704  T
Q  105 taattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
     ||||||| ||||||| |||||||  |||||||||||||||||||  |||||||| |||||||| ||||||||||||  |||||||||||    
T  12756703 aaattcaagtaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcatcacagatcatcattaatattatat 12756614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16410086 - 16410215
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16410086 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 16410184  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || ||||||||| |||| || ||||||||||    
T  16410185 catataattcaagtaatacatatacaattat 16410215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 13869373 - 13869503
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13869373 tcatgcagcttagttaaataacaacagcgacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 13869472  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
     | |||||  |||| ||||| ||||||||||    
T  13869473 aagataatctaattgatgcatatacaattat 13869503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 3386360 - 3386503
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  3386360 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacatgataatatcaaatgcaagtcaa-caacgtctcaattattca 3386458  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataaca 143  Q
    || ||||||||| |||| || |||||||  |||||||||||||||    
T  3386459 catataattcaagtaatacatatacaattatatcacaatataaca 3386503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 18430739 - 18430886
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  18430739 tcatgcagcttagttaaataacaacagcaacacaacagtatataaaaacatcatgacataataatatcaaatgcaagtcaa-caacatctcaattattca 18430837  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  18430838 catataattcaagtaatgcatatacaattatatcacagtataacaacat 18430886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24275198 - 24275316
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24275198 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 24275296  T
Q  101 caaataattcaattaatgca 120  Q
    || ||||||||| |||||||    
T  24275297 catataattcaagtaatgca 24275316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 24704715 - 24704859
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||   || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24704715 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaa---caagacataataatatcaaatgcaagtcaa-caacgtctcaattattca 24704810  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  24704811 catataattcaagtaatgcatatacaattatatcacaatataacaacat 24704859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 13647355 - 13647503
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13647355 tcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 13647453  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  13647454 acatataattcaagtaatgcatatacaattatatcacaatataacaacat 13647503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 17062050 - 17061872
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||| |||| || || ||||||||||||  |||||||||||||||||||||||||||||||  ||||||||||||||||     
T  17062050 tcatgcagcttagttaaataacaatcagcaactcagcagtatacaaaat-agcatgacataataatatcaaatgcaagtcag-caacgtctcaattatta 17061953  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcat 177  Q
    ||| ||||||||| ||||||| |||||||  |||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  17061952 acatataattcaagtaatgcatatacaattatatcacaatataacaacatcaaatcatcataaatcagcttcacagatcat 17061872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16213711 - 16213858
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  16213711 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacaacatgacataataatatcaaatccaagtcaa-caacgtcttaattattca 16213809  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||| ||||||||||    
T  16213810 catataattcaagtaatgcatatataattatatcacaacataacaacat 16213858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 26356089 - 26355971
Alignment:
Q  30 acacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat- 128  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||     
T  26356089 acacaacagtatacaaaaacagcataacataataatatcaaatgcaagtcaa-caacgtctcaattattcacatataattcaagtaatgcatatacaatt 26355991  T
Q  129 -tatcacaatataacaacat 147  Q
     |||||||||||||||||||    
T  26355990 atatcacaatataacaacat 26355971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 26358541 - 26358423
Alignment:
Q  30 acacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat- 128  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||     
T  26358541 acacaacagtatacaaaaacagcataacataataatatcaaatgcaagtcaa-caacgtctcaattattcacatataattcaagtaatgcatatacaatt 26358443  T
Q  129 -tatcacaatataacaacat 147  Q
     |||||||||||||||||||    
T  26358442 atatcacaatataacaacat 26358423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 20110583 - 20110720
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20110583 tcatgcagcttagttaaataacaacagc----------tatacaaaaacagcatgacataataatatcaaatgcaagtcaat-aacgtctcaattattca 20110671  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  20110672 catataattcaagtaatgcatatacaattatatcacaatataacaacat 20110720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13831400 - 13831499
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| | ||||   |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  13831400 tcatgcagcttagttaaataacaacaacaacacggtagtatacaaaaacaacatgacataataatataaaatgcaagtcaa-caacgtctcaattattca 13831498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 48273421 - 48273512
Alignment:
Q  3 atgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaat 94  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  48273421 atgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaat 48273512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3564455 - 3564337
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||| |||||||||||||||||||||| ||||||| |||| |||||||||| |    
T  3564455 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaa-caacatctcaattatac 3564357  T
Q  100 acaaataattcaattaatgc 119  Q
    |   ||||||||| ||||||    
T  3564356 attcataattcaagtaatgc 3564337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 15082019 - 15081937
Alignment:
Q  67 tcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||    
T  15082019 tcaaatgcaagtcaatcaatgtctcaattattcacatataattcaattaatgcatatacaattatatcacaatataacaacat 15081937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 38227511 - 38227633
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||| ||| ||| |  |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| || |||||    
T  38227511 tcatgcagcttagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaa-caacatcttaaatattc 38227608  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||| ||||||||||| |||||    
T  38227609 aattatacttcaattaatgtacata 38227633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12698861 - 12698985
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaa-acagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||| ||||||||||||||||||||||| ||||| || |||||| ||| || ||||    
T  12698861 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattc-atcaacatcttaaatatt 12698959  T
Q  99 cacaaataattcaattaatgcacata 124  Q
    || | ||  ||||| |||||||||||    
T  12698960 caaatattcttcaagtaatgcacata 12698985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 9509219 - 9509342
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||  ||| |  |||||||||| |||||||||||||||||||||||| ||||| || |||||| ||| || |||||    
T  9509219 tcatgcagcttagttaaataacaacagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattc-atcaacatcttaaatattc 9509317  T
Q  100 acaaataattcaattaatgcacata 124  Q
    | | ||  ||||| |||||||||||    
T  9509318 aaatattcttcaagtaatgcacata 9509342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10589069 - 10589150
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||| ||||||||||| ||||||| ||||| ||||    
T  10589069 tcatgcagcttagttaaataacaacagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaa 10589150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18456503 - 18456381
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||| | ||| ||| |  |||||||||||| || |||||||||||||||||||||||||||||| |||| ||| || |||||    
T  18456503 tcatgcagcttagttaaataacgatagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaa-caacatcttaaatattc 18456406  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||| ||||| |||||||||||    
T  18456405 aattatacttcaagtaatgcacata 18456381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 26212034 - 26212107
Alignment:
Q  9 cttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||| ||| |  |||||||||||| |||||||||||||||||||||| ||||| ||||    
T  26212034 cttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaa 26212107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 15144128 - 15144052
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaag 77  Q
    |||||||||||||||||||||||||||| |||   |||||| ||| ||||||| || || |||||||||||||||||    
T  15144128 tcatgcagcttagttaaataacaacagcaacatctcagtatgcaataacagcaagatatcataatatcaaatgcaag 15144052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 2280165 - 2280080
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||||||||||| ||||||||||||||||||| |||| |||| |||||| |||||| | ||||||||| |||| || ||| ||||||    
T  2280165 aaaacagcatgatataataatatcaaatgcaaatcaa-caacatctcaaatattcatatataattcaaataatacatataaaattat 2280080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 46580602 - 46580557
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  46580602 cagcttcacagatcatcagtaatattatattcaacctccattccta 46580557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 19486790 - 19486654
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat--cacaatataa- 141  Q
    |||||| ||||| |||||||||||  | | |||| || |||| |||||| || ||||| ||||||||| | ||||| ||||||||||  |||| |||||     
T  19486790 aaaacatcatgatataataatatcgcacgtaagtaaa-caacatctcaaataatcacatataattcaagttatgcatatacaattatatcacattataaa 19486692  T
Q  142 caacatgaa-tcatcagaaatcagcttcacagatcatc 178  Q
    |||||| || |||||| |||||||||||||||||||||    
T  19486691 caacatcaaatcatcataaatcagcttcacagatcatc 19486654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 14273708 - 14273753
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  14273708 cagcttcacagatcatcagtaatattatattcaaccttcattccta 14273753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16386339 - 16386268
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||| |||| ||||| |  |||||||||||| |||||||||||||  |||||||    
T  16386339 tcatgcagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaa 16386268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 16998788 - 16998831
Alignment:
Q  164 gcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  16998788 gcttcacagatcatcagtaatattatattcaatctccattccta 16998831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 13647603 - 13647647
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||| ||||||||| |||||||||||||||||| |||||||||    
T  13647603 agcttcgcagatcatcagtaatattatattcaacccccattccta 13647647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 13918451 - 13918407
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  13918451 agcttcacagatcatcagtaatattatattcaacccacattccta 13918407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 25927177 - 25927133
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  25927177 agcttcacagatcatcagtaatattatattcaacccacattccta 25927133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 20774 - 20921
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20774 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 20872  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  20873 catataattcaagtaatgcatatacaattatatcacaatataacaacat 20921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 37848 - 37995
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37848 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 37946  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  37947 catataattcaagtaatgcatatacaattatatcacaatataacaacat 37995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 114; Significance: 2e-57; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 94438 - 94585
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  94438 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 94536  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  94537 catataattcaagtaatgcatatacaattatatcacaatataacaacat 94585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17575 - 17428
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17575 tcatgcagcttagttaaataacaatagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 17477  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  ||||||| |||||||||||    
T  17476 catataattcaagtaatgcatatataattatatcacagtataacaacat 17428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 44481 - 44611
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatac-aaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  44481 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaattattc 44579  T
Q  100 acaaataattcaattaatgcacatacaattat 131  Q
    ||| ||||||||| ||||||| ||| ||||||    
T  44580 acatataattcaagtaatgcatatagaattat 44611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 158585 - 158438
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  158585 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 158487  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  158486 catataattcaagtaatgcatatacaattatatcacaatataacaacat 158438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 2e-57; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 18808970 - 18809117
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18808970 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 18809068  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  18809069 catataattcaagtaatgcatatacaattatatcacaatataacaacat 18809117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 23709667 - 23709520
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23709667 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 23709569  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  23709568 catataattcaagtaatgcatatacaattatatcacaatataacaacat 23709520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 23712148 - 23712001
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23712148 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 23712050  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  23712049 catataattcaagtaatgcatatacaattatatcacaatataacaacat 23712001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 24367801 - 24367948
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24367801 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 24367899  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  24367900 catataattcaagtaatgcatatacaattatatcacaatataacaacat 24367948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39682340 - 39682487
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39682340 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 39682438  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  39682439 catataattcaagtaatgcatatacaattatatcacaatataacaacat 39682487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 571424 - 571571
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  571424 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattgttca 571522  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  571523 catataattcaagtaatgcatatacaattatatcacaatataacaacat 571571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6726022 - 6726169
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  6726022 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgtaagtcaa-caacgtctcaattattca 6726120  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  6726121 catataattcaagtaatgcatatacaattatatcacaatataacaacat 6726169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21155195 - 21155048
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  21155195 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaattgcaagtcaa-caacgtctcaattattca 21155097  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  21155096 catataattcaagtaatgcatatacaattatatcacaatataacaacat 21155048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 23130889 - 23131036
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23130889 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 23130987  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  23130988 catataattcaagtaatgcatatacaattatatcacagtataacaacat 23131036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 23133356 - 23133503
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23133356 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 23133454  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  23133455 catataattcaagtaatgcatatacaattatatcacagtataacaacat 23133503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 23135617 - 23135764
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23135617 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 23135715  T
Q  101 caaataattcaattaatgcacatacaatt--atcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||||||||  |||||| |||||||||||    
T  23135716 catataattcaagtaatgcatatacaattacatcacagtataacaacat 23135764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32039633 - 32039486
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32039633 tcatgcagcttagttaaataacaacagtaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 32039535  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  32039534 catataattcaagtaatgcatatacaattatatcacaatataacaacat 32039486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 34402657 - 34402510
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34402657 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 34402559  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  34402558 catataattcaagtaatgcatatacaattatatcacagtataacaacat 34402510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24898331 - 24898183
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24898331 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 24898233  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  24898232 acatataattcaagtaatgcatatacaattatatcacagtataacaacat 24898183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24900814 - 24900666
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24900814 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 24900716  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  24900715 acatataattcaagtaatgcatatacaattatatcacagtataacaacat 24900666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24903291 - 24903143
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24903291 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 24903193  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  24903192 acatataattcaagtaatgcatatacaattatatcacagtataacaacat 24903143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24905768 - 24905620
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24905768 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 24905670  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  24905669 acatataattcaagtaatgcatatacaattatatcacagtataacaacat 24905620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24908243 - 24908095
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24908243 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattc 24908145  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  24908144 acatataattcaagtaatgcatatacaattatatcacagtataacaacat 24908095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 38967401 - 38967531
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  38967401 tcatgcagcttagttaaataacaacatcgacacaacaatatacaaaaatagcatgaaataataatatcaaatgcaagtcaatcaacatctcaattattca 38967500  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || ||||||||||||||||| ||||||||||    
T  38967501 catataattcaattaatgcatatacaattat 38967531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 26505406 - 26505553
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26505406 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 26505504  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  26505505 catataattcaagtaatgcatatacaattatatcacagtataacaacat 26505553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 26507884 - 26508031
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26507884 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 26507982  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  26507983 catataattcaagtaatgcatatacaattatatcacagtataacaacat 26508031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 28577126 - 28577273
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  28577126 tcatgcagcttagttaaataacaacagcaacgcaacagtatacaaaaacagcatgatataataatatcaaatgcaagccaa-caacgtctcaattattca 28577224  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  28577225 catataattcaagtaatgcatatacaattatatcacaatataacaacat 28577273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32215056 - 32214909
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32215056 tcatgcagcttagttaaataacaacaacaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 32214958  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  32214957 catataattcaagtaatgcatatataattatatcacaatataacaacat 32214909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 45029989 - 45029839
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45029989 tcatgcagcttagttaaataacaacaacaacacaacaatatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 45029891  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacatgaa 150  Q
    || ||||||||| ||||||| ||||| |  ||||||||||||||||||||||    
T  45029890 catataattcaagtaatgcatatacatttatatcacaatataacaacatgaa 45029839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 22105439 - 22105587
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  22105439 tcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaa-caacttctcaattattc 22105537  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  22105538 acatataattcaagtaatgcatatacaattatatcacaatataacaacat 22105587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 43137326 - 43137469
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||  | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  43137326 tcatgcagcttagttaaataacaacagcaacacagtaatatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattgttca 43137424  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataaca 143  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||    
T  43137425 catataattcaagtaatgcatatacaattatatcacaatataaca 43137469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24529664 - 24529516
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaatta-ttc 99  Q
    ||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| |||    
T  24529664 tcatgcagcatagttaaataacaacaacaacacatcagtatacaaaaacagcatgacataataatatcaagtgcaagttaa-caacgtctcaattatttc 24529566  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    | | ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  24529565 atatataattcaaataatgcatatacaattatatcacaatataacaacat 24529516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 24642933 - 24642844
Alignment:
Q  59 taataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  24642933 taataatatcaaatgcaagtcaa-caacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacaatataacaacat 24642844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23076472 - 23076553
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  23076472 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaa 23076553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 22337145 - 22337263
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| |||||  | ||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||| ||| |    
T  22337145 tcatgcagcttagttaaataacaacagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaa-caacatctcaaatatac 22337243  T
Q  100 acaaataattcaattaatgc 119  Q
    |   ||||||||| ||||||    
T  22337244 attcataattcaagtaatgc 22337263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 19671860 - 19672034
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    ||||||||||||||||| |||||| |||| ||| |  |||||| | |||||| ||||| ||||||||||| || |||||| || |||| |||||| ||||    
T  19671860 tcatgcagcttagttaattaacaatcagcaacataggcagtatgc-aaaacatcatgatataataatatcgaacgcaagt-aaacaacatctcaa-tatt 19671956  T
Q  99 cacaaataattcaattaatgcacatacaat--tatcacaatataacaacatgaatcatcagaaatcagcttcacagat 174  Q
    |||| ||||||||| ||||||| |||||||  ||||||| ||||||||||| |||||||| | |||||||||||||||    
T  19671957 cacatataattcaagtaatgcatatacaattatatcacattataacaacatcaatcatcatagatcagcttcacagat 19672034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23060543 - 23060624
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  23060543 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaa 23060624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22731325 - 22731249
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| ||| |  |||| |||||||||||||||||||||||||||||| |||||    
T  22731325 tcatgcagcttagttaaataacaacagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaa 22731249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24643085 - 24643034
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagc 52  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  24643085 tcatgcagcttagttaaataacaacagcaacacatcagtatacaaaaacagc 24643034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38205 - 38136
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| ||| |  |||||||| ||||||||||||||||||||||||||    
T  38205 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacagcatgacataataatatcaa 38136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 22738270 - 22738148
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||||||||||||||||   |     |||| |||||||||||||||||||||||||||||| ||||| || |||||| ||| || ||||||    
T  22738270 tcatgcagcttagttaaataacaacattaaataggcagtttacaaaaacagcatgacataataatatcaattgcaattc-atcaacatcttaaatattca 22738172  T
Q  101 caaataattcaattaatgcacata 124  Q
     | ||  ||||| |||||||||||    
T  22738171 aatattcttcaagtaatgcacata 22738148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23285895 - 23285967
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||||||    |||||||||||||||| |||||    
T  23285895 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaca----gacataataatatcaattgcaa 23285967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 7779 - 7694
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||||| ||||| |||| ||||||||||||||||| |||||| ||||||  ||||| | ||||||||| ||||| | ||||||||||    
T  7779 aaaacaacatgatataacaatatcaaatgcaagtc-atcaacatctcaaacattcatatataattcaagtaatgtatatacaattat 7694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 298906 - 298824
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||| |||| ||| |  |||||||||||| |||||||||||||  ||||||| ||||| ||||    
T  298906 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaa 298824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 18358661 - 18358616
Alignment:
Q  162 cagcttcacagatcatcg-taatattatattcaacctccattccta 206  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  18358661 cagcttcgcagatcatcggtaatattatattcaacctccattccta 18358616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23103486 - 23103389
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||||||||||||| |||||| ||| |  ||||||||  |||||||||||||| || ||||||||| ||| || |||||| ||||||| ||||    
T  23103486 tcatgcagcttagttaaataaaaacagcaacataggcagtatac--aaacagcatgacatgattatatcaaattcaattc-atcaacatctcaatcattc 23103390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 34874139 - 34874094
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||    
T  34874139 cagcttcacatatcatcagtaatattatattcaacctccattccta 34874094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 22173719 - 22173675
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| |||||||||||||||||| |||||||||    
T  22173719 agcttcacagatcatcagtaatattatattcaacccccattccta 22173675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 21081663 - 21081618
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||    
T  21081663 cagcttcacatatcatcagtaatattatattcatcctccattccta 21081618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 23660061 - 23660133
Alignment:
Q  9 cttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||| ||||||||| ||| |  |||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  23660061 cttagttaaacaacaacagcaacataggcagtatacgaaa-caggatgacataataatatcaaatgcaaatcaa 23660133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 26392579 - 26392620
Alignment:
Q  166 ttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||| |||| ||||||||||||||||||||||||||||    
T  26392579 ttcacagaacatcagtaatattatattcaacctccattccta 26392620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 27472613 - 27472658
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||    
T  27472613 cagcttcacagatcattagtaatattatattcaacctccagtccta 27472658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 22173868 - 22173817
Alignment:
Q  98 tcacaaataattcaattaatgcacatacaattat--cacaatataacaacat 147  Q
    ||||| ||||||||| ||||||| ||||||||||  ||||||||||||||||    
T  22173868 tcacatataattcaagtaatgcatatacaattatatcacaatataacaacat 22173817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 111; Significance: 9e-56; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 79419 - 79227
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  79419 tcatgcagcttagttaaataacaacagcaacacgacagtatataaaaacagcatgacataataatttcaaatgcaagtcaa-caacgtctcaattattca 79321  T
Q  101 caaataattcaattaatgcacatacaa--ttatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    || ||||||||| ||||||| ||||||   |||||||||||||||||||  |||||||| ||||||||||||| |||||||  |||||||||||    
T  79320 catataattcaagtaatgcatatacaagtatatcacaatataacaacatcaaatcatcataaatcagcttcactgatcatcattaatattatat 79227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 17308 - 17188
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaa--cagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattat 97  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||||  ||||||||||||||||||||||||||||||||| |||| |||||| |||    
T  17308 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaagtat 17210  T
Q  98 tcacaaataattcaattaatgc 119  Q
     ||   ||||||||| ||||||    
T  17209 acattcataattcaagtaatgc 17188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 13419 - 13566
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13419 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 13517  T
Q  101 caaataattcaattaatgcacatacaatt--atcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||||||||  |||||| |||||||||||    
T  13518 catataattcaagtaatgcatatacaattacatcacagtataacaacat 13566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 13974 - 14121
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13974 tcatgcagcttagataaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 14072  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  14073 catataattcaagtaatgcatatacaattatatcacaatataacaacat 14121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 16811 - 16990
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |    
T  16811 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattta 16909  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||||||| |||||||  ||||||||||||||| |||  |||||||| |||||||||||||||||||||    
T  16910 catataattcaagtaatgcatatacaattatatcacaatataacatcatcaaatcatcataaatcagcttcacagatcatc 16990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4241 - 4371
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4241 tcatgcaacttagttaaataacgacagcgacacagcagtatacaaaaccagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 4340  T
Q  101 caaataattcaattaatgcacatacaattat 131  Q
    || ||||||||||||||||| ||||||||||    
T  4341 catataattcaattaatgcatatacaattat 4371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 106; Significance: 9e-53; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 20513 - 20336
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20513 tcatgcagcttagttaaataacaacagcaacacatcagtatac-aaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 20416  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||||||| |||||||  ||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  20415 catataattcaagtaatgcatatacaattatatcacaatataa-aacatcaaatcatcataaatcagcttcacagatcatc 20336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 128781 - 128861
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||| |||||||||||||||| ||| ||| || |  | | ||||||||||||||||||||||||||||||||||||||    
T  128781 tcatgcaacttagttaaataacaaaagcaacaaaaaaaaaaaaaaaaacagcatgacataataatatcaaatgcaagtcaa 128861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 106; Significance: 9e-53; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 134238 - 134385
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  134238 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 134336  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  134337 catataattcaagtaatgcatatacaattatatcacagtataacaacat 134385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 136707 - 136854
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  136707 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 136805  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  136806 catataattcaagtaatgcatatacaattatatcacagtataacaacat 136854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 139176 - 139323
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  139176 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 139274  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  139275 catataattcaagtaatgcatatacaattatatcacagtataacaacat 139323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 144114 - 144261
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  144114 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 144212  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  144213 catataattcaagtaatgcatatacaattatatcacagtataacaacat 144261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 141645 - 141792
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  141645 tcatgtagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 141743  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  141744 catataattcaagtaatgcatatacaattatatcacagtataacaacat 141792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 4324 - 4503
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||| |||    
T  4324 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacaacatgacataataatatcaattgcaaatcaa-caacgtctcaattaatca 4422  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagatcatc 178  Q
    || ||||||||| ||||||| ||| |||  ||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  4423 catataattcaagtaatgcatatataattatatcacaatataacatcatcaaatcatcagaaatcagcttcacagatcatc 4503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 4721 - 4868
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4721 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 4819  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  4820 catataattcaagtaatgcatatataattatatcacaatataacaacat 4868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29959 - 30106
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  29959 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaagtgtaagtcaa-caacgtctcaattattca 30057  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| |||| || |||||||  |||||||||||||||||||    
T  30058 catataattcaaataattcatatacaattatatcacaatataacaacat 30106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1416 - 1268
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||||||| ||||||||||||||   |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1416 tcatgcagcttggttaaataacaacaataacacatgagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattca 1317  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||||||||||| |||||||  |||||||||||||||||||    
T  1316 catataattcaattaatgcatatacaattatatcacaatataacaacat 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 99; Significance: 1e-48; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 9776 - 9924
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaatta-ttc 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||    
T  9776 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagaatgacataataatatcaagtgcaagtcaa-caacgtctcaattatttc 9874  T
Q  100 acaaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    ||| ||||||||| ||||||| |||||||  |||||||||||||||||||    
T  9875 acatataattcaaataatgcatatacaattatatcacaatataacaacat 9924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 32972 - 33094
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||| ||||||||||| ||| ||| |  |||||||||||| |||||||||||||||||||||||||||||| || |||| ||| || |||||    
T  32972 tcatgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagttaa-caacatcttaaatattc 33069  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||| ||||| |||||||||||    
T  33070 aattatacttcaagtaatgcacata 33094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38791 - 38866
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||| ||||||||||| ||| ||| |  |||||||||||| ||||||||||||||||||||||||||||    
T  38791 tcatgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaa 38866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 40430 - 40574
Alignment:
Q  4 tgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaa 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  40430 tgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaggatgacataataatatcaaatgcaagtcaa-caacgtctcaattattcacat 40528  T
Q  104 ataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    | ||||||| ||||||| |||||||  ||||||| |||||||||||    
T  40529 aaaattcaagtaatgcatatacaattatatcacagtataacaacat 40574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 10800 - 10947
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10800 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 10898  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || |||||| || ||||||| ||| |||  |||||||||||||||||||    
T  10899 catataatttaagtaatgcatatataattatatcacaatataacaacat 10947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 9269 - 9416
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9269 tcatgcagcttagttaaataacaacagcaacacaacagtatataaaaacatcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 9367  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || |||||| || ||||||| ||| |||  |||||||||||||||||||    
T  9368 catataatttaagtaatgcatatataattatatcacaatataacaacat 9416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 96; Significance: 8e-47; HSPs: 2)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 135 - 280
Alignment:
Q  3 atgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcaca 102  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  135 atgcagcttagttaaataacaacagcaacacaatagtatacaaaaacaacatgacataataatatcaaatgcaaatcaa-caacgtctcaattattcaca 233  T
Q  103 aataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
     ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  234 tataattcaagtaatgcatatataattatatcacaatataacaacat 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 378 - 422
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  378 agcttcacagatcatcagtaatattatattcaacctccattccta 422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 11315 - 11459
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11315 tcatgcaacttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattca 11413  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaa 144  Q
    || || |||||| ||||||| ||| |||  ||||||||||||||||    
T  11414 catatgattcaagtaatgcatatataattatatcacaatataacaa 11459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 94; Significance: 1e-45; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 82099 - 82246
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    ||||| |||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  82099 tcatgaagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattca 82197  T
Q  101 caaataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
    || ||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  82198 catataattcaagtaatgcatatataattatatcacaatataacaacat 82246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22761 - 22632
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    |||||||||||||||||||||| |||||||||| | ||||||| | ||| || ||||| |||| |||||| |||||||||| |||||| |||||| || |    
T  22761 tcatgcagcttagttaaataacaaacagcgacatagacagtatgc-aaatcatcatgatataacaatatcgaatgcaagtc-atcaacatctcaaata-t 22665  T
Q  99 cacaaataattcaattaatgcacatacaattat 131  Q
    || | ||||||||  ||||| | ||||||||||    
T  22664 caaacataattcatgtaatgtatatacaattat 22632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 82348 - 82390
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattcc 204  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  82348 agcttcacagatcatcagtaatattatattcaacccccattcc 82390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 12382 - 12237
Alignment:
Q  3 atgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcaca 102  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  12382 atgcagcttagttaaataacaacagcaacacagcagaatacaaaaacagcatgacaaaataatatcaaatgcaagtcaa-caacgtctcaattattcaca 12284  T
Q  103 aataattcaattaatgcacatacaat--tatcacaatataacaacat 147  Q
      |||||||| ||||||| ||| |||  |||||||||||||||||||    
T  12283 tttaattcaagtaatgcatatataattatatcacaatataacaacat 12237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 12107 - 12232
Alignment:
Q  23 aacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcaca 122  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |    
T  12107 aacagcaacacagcagtatactaaaacagcatgacataataatatcaaatgcaagtcaa-caacgtctcaattattcacatataattcaagtaatgcata 12205  T
Q  123 tacaat--tatcacaatataacaacat 147  Q
    ||||||  |||||||||||||||||||    
T  12206 tacaattatatcacaatataacaacat 12232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 12333 - 12374
Alignment:
Q  166 ttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  12333 ttcacagatcatcagtaatattatattcaacccccattccta 12374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 22913 - 23035
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || ||||||    
T  22913 tcatgcagcttagttaaataacaacagcaacacaccagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacatcttaaatattca 23011  T
Q  101 caaataattcaattaatgcacata 124  Q
       ||| ||||| |||||||||||    
T  23012 attatacttcaagtaatgcacata 23035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 116457 - 116536
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  116457 tcatgcagcttagttaaataacaacagcgacacaacagtatac-aaaacagcatgacataatcatatcaaatgcaagtcaa 116536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44798 - 44717
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  44798 tcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 44717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 26156 - 26038
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| ||| |    
T  26156 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaa-caacgtctcaagtatac 26058  T
Q  100 acaaataattcaattaatgc 119  Q
    |   ||||||||| ||||||    
T  26057 attcataattcaagtaatgc 26038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16691 - 16610
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||| |||||||    
T  16691 tcatgcagcttagttaaataacaacagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaa 16610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 483 - 555
Target Start/End: Original strand, 1 - 73
Alignment:
Q  483 gatcaattaaggacaaggtaaaatagagagagatcgaaatatagctgaaaagctatcactattagtactatat 555  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  1 gatcaattaaggacaaggtaaaatatagagagatcggaatatagctgaaaagctatcactatcagtactatat 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 4544 - 4655
Alignment:
Q  8 gcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaata 106  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| ||| ||   |||    
T  4544 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaaatatacattcata 4642  T
Q  107 attcaattaatgc 119  Q
    |||||| ||||||    
T  4643 attcaagtaatgc 4655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 12126 - 12237
Alignment:
Q  8 gcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaata 106  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| ||| ||   |||    
T  12126 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaaatatacattcata 12224  T
Q  107 attcaattaatgc 119  Q
    |||||| ||||||    
T  12225 attcaagtaatgc 12237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 22078 - 22189
Alignment:
Q  8 gcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaata 106  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| ||| ||   |||    
T  22078 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaaatatacattcata 22176  T
Q  107 attcaattaatgc 119  Q
    |||||| ||||||    
T  22177 attcaagtaatgc 22189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 39507 - 39629
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||| | ||| |  |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||| |    
T  39507 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaa-caacatctcaaatatac 39604  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||||||||| |||||||||||    
T  39605 attcataattcaagtaatgcacata 39629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 75305 - 75183
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||| | ||| |  |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||| |    
T  75305 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaa-caacatctcaaatatac 75208  T
Q  100 acaaataattcaattaatgcacata 124  Q
    |   ||||||||| |||||||||||    
T  75207 attcataattcaagtaatgcacata 75183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 1881 - 2004
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||||||||||||||| ||||| || |||||| ||| || |||||    
T  1881 tcatgcagcttagttaaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattc-atcaacatcttaaatattc 1979  T
Q  100 acaaataattcaattaatgcacata 124  Q
    | | ||  ||||| |||||||||||    
T  1980 aaatattcttcaagtaatgcacata 2004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 3585 - 3503
Alignment:
Q  36 cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||  ||||||||| ||||||    
T  3585 cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa-caacatctcaattatacactcataattcaagtaatgc 3503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 51943 - 52024
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||||| ||| |  || |||||||||||||||||||||||||||||||| ||||||||||    
T  51943 tcatgcagcttagttaaataacaacagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaa 52024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 168069 - 167950
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||| | ||| |  ||||||||||||| ||||||||||||||||||||| ||||| || |||||| ||| || |||||    
T  168069 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattc-atcaacatcttaaatattc 167971  T
Q  100 acaaataattcaattaatgca 120  Q
    | | || |||||| |||||||    
T  167970 aaatattattcaagtaatgca 167950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3241 - 3123
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||| || |||||||||||||||||||||||||||||| |||| |||||| ||| |    
T  3241 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaa-caacatctcaaatatac 3144  T
Q  100 acaaataattcaattaatgca 120  Q
    |   ||||||||| |||||||    
T  3143 attcataattcaagtaatgca 3123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13241 - 13317
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||| |||||    
T  13241 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaa 13317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3277 - 3159
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||| |||||||||||||||| || |||| |||| |||||| ||| |    
T  3277 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaa-caacatctcaagtatac 3179  T
Q  100 acaaataattcaattaatgc 119  Q
    |   ||||||||| ||||||    
T  3178 attcataattcaagtaatgc 3159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4879 - 4960
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||| ||||||||||||||||||| ||| |  |||||||||||| |||||||||||||||||||||||||||| ||||    
T  4879 tcatgcagattagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaa 4960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1139 - 1020
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    |||||||||||||||||||||||||| | ||| |  ||||||||||||| ||||||||||||||||||||| ||||| || |||||| ||| || |||||    
T  1139 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattc-atcaacatcttaaatattc 1041  T
Q  100 acaaataattcaattaatgca 120  Q
    | | || |||||| |||||||    
T  1040 aaatattattcaagtaatgca 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 13092 - 13164
Alignment:
Q  58 ataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||| ||| ||||||    
T  13092 ataataatatcaaatgcaagtcaa-caacgtctcaattattcacatataattgaagtaatgcatatataattat 13164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 46; Significance: 6e-17; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 33047 - 32967
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||||| |||||||||| |||||  |||||||||||| |||||||||||||||||||||| ||||| ||||    
T  33047 tcatgcagcttagttaattaacaacagcaacacaggcagtatacaaaa-cagcatgacataataatatcaattgcaattcaa 32967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 45958 - 46038
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||||| |||||||||| |||||  |||||||||||| |||||||||||||||||||||| ||||| ||||    
T  45958 tcatgcagcttagttaattaacaacagcaacacaggcagtatacaaaa-cagcatgacataataatatcaattgcaattcaa 46038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16143 - 16220
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaag 77  Q
    |||||||||||||||||||||||||| | ||| |  |||||||||||||||||| || || |||||||||||||||||    
T  16143 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcaagatatcataatatcaaatgcaag 16220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28444 - 28525
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||||||||||||||||| | ||| |  ||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  28444 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaa 28525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 24394 - 24270
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaa-acagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||| |||||||||||||| |||||||| ||||| || |||||| ||| || ||||    
T  24394 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattc-atcaacatcttaaatatt 24296  T
Q  99 cacaaataattcaattaatgcacata 124  Q
    || | ||  ||||| |||||||||||    
T  24295 caaatattcttcaagtaatgcacata 24270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1982 - 2101
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||||||||||||||| |||||||||||||| |  |||||||||||| || ||||||||||| ||||||| ||||| |||| |||| ||| || |||||    
T  1982 tcatgcagcttagttaattaacaacagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaa-caacatcttaaatattc 2080  T
Q  100 acaaataattcaattaatgca 120  Q
    | | || |||||| |||||||    
T  2081 aaacattattcaagtaatgca 2101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8509 - 8590
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||| |||||||||||| ||| ||| |   ||||||||||||||| |||||||||||||||||| ||||||||||    
T  8509 tcatgcagcttggttaaataacaatagcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtcaa 8590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 8496 - 8623
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    |||||||||||||||||||||||| || | ||| |  |||||| ||||| |||||||| |||| ||||||||||||||||| |||||| |||||| ||||    
T  8496 tcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaa-cagcatgatataacaatatcaaatgcaagtc-atcaacatctcaaatatt 8593  T
Q  99 cacaaataattcaattaatgcacatacaat 128  Q
    || | ||||||||| ||||| | |||||||    
T  8594 catatataattcaagtaatgtatatacaat 8623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11993 - 12042
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaaca 50  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  11993 tcatgcagcttagttaaataacaacagcaacacaacagtataccaaaaca 12042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 12041 - 12135
Alignment:
Q  83 caacgtctcaattattcacaaataattcaattaatgcacatacaat--tatcacaatataacaacat-gaatcatcagaaatcagcttcacagat 174  Q
    ||||| |||||||||||||| |||||||||  |||||| |||||||  |||||||||||||||  ||  |||||||| |||||||||||||||||    
T  12041 caacgcctcaattattcacatataattcaagcaatgcatatacaattatatcacaatataacagtatcaaatcatcataaatcagcttcacagat 12135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 13158 - 13203
Alignment:
Q  36 cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  13158 cagtatacaaaaacagcatgacataataatatcaattgcaagtcaa 13203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3500 - 3576
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    ||||| |||||||||||||||| | ||| ||| |  ||||||||||||||||||||||||||||||||||| |||||    
T  3500 tcatgtagcttagttaaataactaaagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaa 3576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 6215 - 6089
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaacag----tatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaatta 96  Q
    |||||||||||||||||||||||||| | |||  | ||    ||||||||||||||||||||| |||||||||| ||||| || |||||| ||| || ||    
T  6215 tcatgcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattc-atcaacatcttaaata 6117  T
Q  97 ttcacaaataattcaattaatgcacata 124  Q
    |||| | ||  ||||| |||||||||||    
T  6116 ttcaaatattcttcaagtaatgcacata 6089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11534 - 11464
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaac-agtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||| | ||| |   |||||||||||||| |||||||||||||||||||    
T  11534 tcatgcagcttagttaaataacaacaacaacataggtagtatacaaaaacaacatgacataataatatcaa 11464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39943 - 40024
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaat 82  Q
    |||||||||||| ||||||||||| ||| ||| |  |||||||||||| || |||||||||||||||||||||||| ||||||    
T  39943 tcatgcagcttaattaaataacaatagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcatgtcaat 40024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 53595 - 53510
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||||| ||||| |||| ||||||||||||||||| |||||| |||||| |||||| | ||||||||| ||||| | ||||||||||    
T  53595 aaaacaacatgatataacaatatcaaatgcaagtc-atcaacatctcaaatattcatatataattcaagtaatgtatatacaattat 53510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4742 - 4803
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataa 61  Q
    |||||||||||||||||||||||||| | ||| |  ||||||||||||||||||||||||||    
T  4742 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcatgacataa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 353 - 398
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  353 cagcttcacagatcatcagtaatattatattcaacctccattccta 398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 731 - 776
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  731 cagcttcacagatcatcagtaatattatattcaacctccattccta 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 10011 - 9966
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  10011 cagcttcacagatcatcagtaatattatattcaacctccattccta 9966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 225482 - 225616
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaat--tatcacaatat-aa 141  Q
    |||||||| ||| ||||||||||||||||||| |||| |||| ||||||  ||||| | ||||||||| ||||||| |||||||  ||||||| ||| ||    
T  225482 aaaacagcgtgatataataatatcaaatgcaa-tcaa-caacatctcaaacattcatatataattcaagtaatgcatatacaattatatcacattataaa 225579  T
Q  142 caacat-gaatcatcagaaatcagcttcacagatcat 177  Q
    ||||||  |||||||| | ||||||||||||| ||||    
T  225580 caacatcaaatcatcatatatcagcttcacagttcat 225616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25926 - 26024
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||| |||||||||||||||||| ||| ||| |  ||||||||||||  | ||||||||||||||||||||||||||| || |||| |||||| |||||    
T  25926 tcatgaagcttagttaaataacaatagcaacataggcagtatacaaaat-atcatgacataataatatcaaatgcaagt-aaacaacatctcaaatattc 26023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39888 - 39986
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattc 99  Q
    ||||| |||||||||||||||||| ||| ||| |  ||||||||||||  | ||||||||||||||||||||||||||| || |||| |||||| |||||    
T  39888 tcatgaagcttagttaaataacaatagcaacataggcagtatacaaaat-atcatgacataataatatcaaatgcaagt-aaacaacatctcaaatattc 39985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8620 - 8543
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    ||||||||||||||||||||||| ||   ||| |  |||||| |||||||||||||||||||||||||||| ||||||||||    
T  8620 tcatgcagcttagttaaataacagca---acataggcagtat-caaaaacagcatgacataataatatcaattgcaagtcaa 8543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13527 - 13596
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| ||| |  |||||||| |||||| |||||||| ||||||||||    
T  13527 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacaacatgacatgataatatcaa 13596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 27795 - 27710
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacatacaattat 131  Q
    |||||||||||| |||| ||||||||||| || |||| |||| ||||||  ||||||| ||||||| | ||||||| ||||||||||    
T  27795 aaaacagcatgatataacaatatcaaatgtaaatcaa-caacatctcaaacattcacatataattctagtaatgcatatacaattat 27710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15554 - 15485
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||| ||| ||| |  |||||||| |||||| |||||||||||||||||||    
T  15554 tcatgcagcttagttaaataacaagagcaacataggcagtatac-aaaacaacatgacataataatatcaa 15485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 3254 - 3209
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  3254 cagcttcacagatcatcagtaatatcatattcaacctccattccta 3209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 11494 - 11688
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcgacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    ||||||||||||||||| |||||| |||| ||| |  |||||| ||||| || ||||| |||||||||||  | | |||| || |||| |||||| || |    
T  11494 tcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaa-catcatgatataataatatcgcacgtaagtaaa-caacatctcaaataat 11591  T
Q  99 cacaaataattcaattaatgcacatacaattat--cacaatataa-caacatgaa-tcatcagaaatcagcttcacagatcatc-gtaatattatat 190  Q
    |||| ||||||||| ||||||| ||||||||||  |||| ||||| |||||| || ||||||  | ||||||||||||||||||  |||||||||||    
T  11592 cacatataattcaagtaatgcatatacaattatatcacattataaacaacatcaaatcatcatcactcagcttcacagatcatcattaatattatat 11688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 8321 - 8366
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||    
T  8321 cagcttcaaagatcatcagtaatattatattcaacctccattccta 8366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 27911 - 27979
Alignment:
Q  51 gcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgca 120  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||| ||   ||||||||| |||||||    
T  27911 gcatgacataataatatcaaatgcaagtcaa-caacatctcaaatatacattcataattcaagtaatgca 27979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 1797 - 1756
Alignment:
Q  166 ttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  1797 ttcacagatcatcagtaatattatattcaacctccattccta 1756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 38793 - 38651
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 98  Q
    ||||||| |||||||||||||||| |||| ||| | ||||||| ||||| || ||||| |||| ||||||||||||||||| |||||  |||||| ||||    
T  38793 tcatgcaccttagttaaataacaaacagcaacatagacagtatgcaaaa-caacatgatataacaatatcaaatgcaagtc-atcaatatctcaaatatt 38696  T
Q  99 cacaaataattcaattaatgcacatacaat--tatcacaatataa 141  Q
     | | ||||||||| || |||  |||||||  |||||||||||||    
T  38695 tatatataattcaagtattgcgtatacaattatatcacaatataa 38651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 222 - 266
Alignment:
Q  163 agcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||||| |||||||||||||||||| |||||||||    
T  222 agcttcacagatcatcagtaatattatattcaacccccattccta 266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32097 - 32165
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcgacaca-acagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||| ||| |  ||||| ||  ||||| |||||||||||||||||||    
T  32097 tcatgcagcttagttaaataacaacagcaacataggcagtaaac--aaacaacatgacataataatatcaa 32165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 4620 - 4578
Alignment:
Q  165 cttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  4620 cttcacagatcatcagtaatattgtattcaacctccattccta 4578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 1373 - 1328
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||||    
T  1373 cagctttacagatcatcagtaatattatattcaaccttcattccta 1328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 2353 - 2308
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||    
T  2353 cagcttcacaggacatcagtaatattatattcaacctccattccta 2308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 10667 - 10712
Alignment:
Q  162 cagcttcacagatcatcgt-aatattatattcaacctccattccta 206  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  10667 cagcttcacagatcatcattaatatcatattcaacctccattccta 10712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 1006 - 931
Alignment:
Q  47 aacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattcacaaataattcaattaatgcacata 124  Q
    ||||||||| |||||||||||| |||||||||||| |||  |||||| ||||||   ||||||||| |||||||||||    
T  1006 aacagcatggcataataatatc-aatgcaagtcaa-caaaatctcaaatattcaatcataattcaagtaatgcacata 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 15933 - 15978
Alignment:
Q  162 cagcttcacagatcatcgt-aatattatattcaacctccattccta 206  Q
    |||||||||||||||||   ||||||||||||||||||||||||||    
T  15933 cagcttcacagatcatcaccaatattatattcaacctccattccta 15978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 169676 - 169631
Alignment:
Q  162 cagcttcacagatcatc-gtaatattatattcaacctccattccta 206  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||||    
T  169676 cagctttacagatcatcagtaatattatattcaaccttcattccta 169631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 8090 - 8126
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaa 81  Q
    |||||||||||| |||| |||||||||||||||||||    
T  8090 aaaacagcatgatataacaatatcaaatgcaagtcaa 8126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 12643 - 12690
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaa 93  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  12643 aaaacagcatgatataacaatatcaaatgcaagtc-atcaacatctcaa 12690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University