View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14592_high_7 (Length: 348)
Name: NF14592_high_7
Description: NF14592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14592_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 19 - 330
Target Start/End: Original strand, 25955817 - 25956128
Alignment:
| Q |
19 |
caaaggcaaaagactaaggtcaatagatttacttacagtatctacaatattttcatcaccattaacaccaccaatcacatagatagaatctttgacaact |
118 |
Q |
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| T |
25955817 |
caaaggcaaaagactaaggtcaatagatttacttacagtatctacaatattttcatcaccattaacaccaccaatcacatagatagaatctttgacgact |
25955916 |
T |
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| Q |
119 |
gcagcagcaaaataccccctaggatgattcattgttgtttcctccaccgtccattttccaagacgaggatcgaatacttcaacacttggaaccattgtga |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25955917 |
gcagcagcaaaataccccctaggatgattcattgttgtttcctccaccgtccattttccaagacgaggatcgaatacttcaacacttggaaccattgtga |
25956016 |
T |
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| Q |
219 |
ctccatcaaagccacctaatgcatacctatacagggaatgaagaagtttagttaagcatgtttcgaccaagaacagaacattacaggtggggaaagttac |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
25956017 |
ctccatcaaagccacctaatgcatacctatacagggaatgaagaagtttagttaagcatgtttcgaccaagaacagaacattacaggtgtggaaagttac |
25956116 |
T |
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| Q |
319 |
ctggctagaaat |
330 |
Q |
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|||||||||||| |
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| T |
25956117 |
ctggctagaaat |
25956128 |
T |
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