View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14592_low_15 (Length: 267)

Name: NF14592_low_15
Description: NF14592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14592_low_15
NF14592_low_15
[»] chr8 (18 HSPs)
chr8 (138-249)||(23858069-23858180)
chr8 (31-112)||(6886005-6886086)
chr8 (31-112)||(19265107-19265187)
chr8 (18-85)||(17977578-17977645)
chr8 (17-112)||(21315656-21315750)
chr8 (17-112)||(24583827-24583921)
chr8 (31-112)||(13313970-13314050)
chr8 (31-112)||(14271184-14271265)
chr8 (17-106)||(23868516-23868604)
chr8 (19-92)||(24519684-24519757)
chr8 (31-112)||(24722644-24722724)
chr8 (32-92)||(18829504-18829564)
chr8 (140-211)||(23857524-23857596)
chr8 (19-95)||(30487172-30487248)
chr8 (17-112)||(25233333-25233427)
chr8 (17-112)||(29381334-29381428)
chr8 (17-106)||(24109714-24109802)
chr8 (46-106)||(24389065-24389124)
[»] chr5 (17 HSPs)
chr5 (19-106)||(26121677-26121764)
chr5 (19-92)||(19762295-19762368)
chr5 (142-242)||(14216680-14216780)
chr5 (25-112)||(24658999-24659085)
chr5 (31-93)||(18227010-18227072)
chr5 (31-105)||(24341083-24341156)
chr5 (19-92)||(13692935-13693008)
chr5 (19-100)||(17831025-17831106)
chr5 (31-112)||(18831518-18831599)
chr5 (20-105)||(28254178-28254264)
chr5 (31-112)||(16522545-16522625)
chr5 (31-112)||(20859695-20859775)
chr5 (19-92)||(24188242-24188315)
chr5 (31-100)||(24264458-24264526)
chr5 (31-112)||(28665808-28665888)
chr5 (61-105)||(18938908-18938952)
chr5 (24-112)||(23388218-23388305)
[»] chr6 (12 HSPs)
chr6 (19-112)||(9898590-9898683)
chr6 (19-112)||(21687850-21687942)
chr6 (17-106)||(22409265-22409353)
chr6 (20-92)||(10504514-10504586)
chr6 (20-92)||(32759373-32759445)
chr6 (17-112)||(14075762-14075856)
chr6 (19-93)||(2587641-2587715)
chr6 (19-112)||(34479456-34479549)
chr6 (17-105)||(14078460-14078547)
chr6 (61-112)||(9519095-9519146)
chr6 (19-92)||(14726483-14726556)
chr6 (8-105)||(19245596-19245692)
[»] chr1 (21 HSPs)
chr1 (17-98)||(16360833-16360914)
chr1 (17-102)||(27116833-27116918)
chr1 (19-94)||(22621211-22621286)
chr1 (19-92)||(10063690-10063763)
chr1 (8-112)||(23035664-23035768)
chr1 (17-112)||(28009139-28009233)
chr1 (17-111)||(18528218-18528311)
chr1 (17-106)||(13267170-13267258)
chr1 (31-112)||(15527521-15527602)
chr1 (19-92)||(17443210-17443283)
chr1 (31-112)||(21333738-21333818)
chr1 (25-106)||(33191713-33191793)
chr1 (31-105)||(15812132-15812207)
chr1 (31-106)||(21983713-21983787)
chr1 (21-112)||(26612027-26612117)
chr1 (17-112)||(31234946-31235040)
chr1 (18-112)||(15542992-15543085)
chr1 (31-112)||(18735226-18735306)
chr1 (31-112)||(24055020-24055100)
chr1 (8-100)||(17120531-17120623)
chr1 (32-112)||(21450117-21450196)
[»] chr3 (28 HSPs)
chr3 (142-226)||(6476177-6476261)
chr3 (17-104)||(23699129-23699216)
chr3 (17-104)||(23717584-23717671)
chr3 (17-104)||(23736040-23736127)
chr3 (148-226)||(6745701-6745779)
chr3 (6-112)||(31284974-31285080)
chr3 (23-112)||(19575209-19575297)
chr3 (29-112)||(2166653-2166735)
chr3 (31-106)||(3115395-3115470)
chr3 (183-226)||(6516307-6516350)
chr3 (17-112)||(16244696-16244790)
chr3 (17-104)||(23755087-23755174)
chr3 (22-107)||(2722860-2722944)
chr3 (31-92)||(23055279-23055340)
chr3 (19-92)||(26092229-26092302)
chr3 (8-104)||(8144493-8144589)
chr3 (17-105)||(12771899-12771986)
chr3 (20-92)||(28369490-28369562)
chr3 (20-92)||(28377308-28377380)
chr3 (20-92)||(28385130-28385202)
chr3 (31-106)||(16229005-16229079)
chr3 (153-214)||(6475619-6475680)
chr3 (153-214)||(6515728-6515789)
chr3 (153-214)||(6746276-6746337)
chr3 (31-112)||(8115932-8116012)
chr3 (31-112)||(20022559-20022639)
chr3 (31-92)||(20886168-20886229)
chr3 (52-112)||(12372957-12373016)
[»] scaffold0263 (1 HSPs)
scaffold0263 (17-112)||(16582-16676)
[»] chr7 (31 HSPs)
chr7 (17-112)||(9134122-9134216)
chr7 (17-106)||(12330386-12330474)
chr7 (14-106)||(18362691-18362782)
chr7 (8-106)||(6006992-6007090)
chr7 (22-92)||(9501307-9501377)
chr7 (31-92)||(18448941-18449002)
chr7 (20-112)||(8310472-8310563)
chr7 (17-112)||(8053088-8053182)
chr7 (17-112)||(8977979-8978073)
chr7 (31-105)||(25692119-25692192)
chr7 (31-112)||(9917509-9917590)
chr7 (31-112)||(9925421-9925502)
chr7 (31-112)||(23297695-23297775)
chr7 (31-112)||(39272141-39272221)
chr7 (8-92)||(9288244-9288328)
chr7 (8-92)||(9298036-9298120)
chr7 (20-92)||(10938600-10938672)
chr7 (20-92)||(13708474-13708546)
chr7 (20-92)||(21884296-21884368)
chr7 (17-104)||(4820217-4820303)
chr7 (31-106)||(19154261-19154336)
chr7 (31-106)||(20753660-20753735)
chr7 (31-112)||(2565483-2565563)
chr7 (61-106)||(2570277-2570322)
chr7 (61-106)||(2573691-2573736)
chr7 (8-109)||(6014523-6014623)
chr7 (19-92)||(21502198-21502271)
chr7 (19-92)||(22468314-22468387)
chr7 (18-78)||(3586225-3586285)
chr7 (20-92)||(5221710-5221782)
chr7 (19-95)||(6040022-6040098)
[»] chr2 (15 HSPs)
chr2 (17-112)||(20175169-20175264)
chr2 (19-92)||(26652360-26652433)
chr2 (17-112)||(25886870-25886964)
chr2 (17-112)||(27908144-27908238)
chr2 (31-112)||(24089894-24089974)
chr2 (34-106)||(13777474-13777546)
chr2 (19-106)||(23010765-23010851)
chr2 (20-92)||(8502173-8502245)
chr2 (34-105)||(32086378-32086448)
chr2 (17-87)||(17350387-17350457)
chr2 (31-112)||(17629387-17629467)
chr2 (31-112)||(17674679-17674759)
chr2 (31-112)||(25921874-25921954)
chr2 (17-113)||(28929673-28929769)
chr2 (20-92)||(34368684-34368756)
[»] scaffold0005 (1 HSPs)
scaffold0005 (8-112)||(244504-244608)
[»] chr4 (20 HSPs)
chr4 (8-112)||(14572768-14572872)
chr4 (31-92)||(9264038-9264099)
chr4 (19-92)||(15049222-15049295)
chr4 (19-92)||(15105129-15105202)
chr4 (8-112)||(12577972-12578075)
chr4 (17-112)||(7583329-7583423)
chr4 (17-112)||(11781872-11781966)
chr4 (17-112)||(15165788-15165882)
chr4 (19-112)||(5529299-5529392)
chr4 (31-112)||(10105628-10105708)
chr4 (8-101)||(19093589-19093681)
chr4 (31-92)||(19547752-19547813)
chr4 (32-92)||(1832613-1832673)
chr4 (32-92)||(18448112-18448172)
chr4 (32-92)||(23975169-23975229)
chr4 (14-112)||(5680225-5680323)
chr4 (17-112)||(16730604-16730698)
chr4 (31-92)||(11520173-11520234)
chr4 (19-92)||(23082975-23083048)
chr4 (20-92)||(10782882-10782954)
[»] scaffold0386 (1 HSPs)
scaffold0386 (28-112)||(14197-14280)
[»] scaffold0054 (1 HSPs)
scaffold0054 (20-112)||(72993-73084)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-111)||(40611-40702)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-88)||(27462-27530)
[»] scaffold0056 (2 HSPs)
scaffold0056 (25-112)||(22308-22394)
scaffold0056 (31-112)||(53824-53904)
[»] scaffold1156 (1 HSPs)
scaffold1156 (31-112)||(592-672)
[»] scaffold0085 (1 HSPs)
scaffold0085 (20-92)||(23351-23423)
[»] scaffold1339 (1 HSPs)
scaffold1339 (61-106)||(599-644)
[»] scaffold0034 (1 HSPs)
scaffold0034 (31-112)||(81064-81144)
[»] scaffold0016 (1 HSPs)
scaffold0016 (24-112)||(4163-4250)


Alignment Details
Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 138 - 249
Target Start/End: Complemental strand, 23858180 - 23858069
Alignment:
Q  138 taaataacgggtaatatttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaattgagctaaaattttggcgcaattt 237  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23858180 taaataacgcgtaatatttaattatttccttaaaacctcccacgcaattgatatataaaatcacaagttaataaattgagctaaaattttggcgcaattt 23858081  T
Q  238 actcttctccct 249  Q
    ||||||||||||    
T  23858080 actcttctccct 23858069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 6886005 - 6886086
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| |||||||||||  ||||| |||| |||||||| |||||| ||  || |||||||||||||||||| |||||    
T  6886005 atcttagaactctagcctataactaattagttactcatggtaactaaagacaagatataaaaagataaaaacataccctaga 6886086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 19265107 - 19265187
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  19265107 atcttagaacgctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-aaaagataaaaacataccctaga 19265187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 17977578 - 17977645
Alignment:
Q  18 taaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaat 85  Q
    ||||||||| ||||||||||||| ||||| || ||||| ||| ||||||||||||| |||||| ||||    
T  17977578 taaatagaggtttatcttagaactctagcttaaaaagatttagttacacatggtaactaaagacaaat 17977645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 21315656 - 21315750
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| || ||||||||||  || |||| ||||||||| |||||||| |||| |||| | ||||||| ||| ||||||||||||| |||||    
T  21315656 ataaatagaggttcatcttagaactttaacctaaaaagaattagttacacatagtaactaaaaaaaaattactaaa-gataaaaacataccctaga 21315750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 24583921 - 24583827
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| || |  ||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  24583921 ataaatagaggttcactttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 24583827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 13314050 - 13313970
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||| ||||| |||||    
T  13314050 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaatcataccctaga 13313970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 14271184 - 14271265
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||||||  || |||||||  | ||| ||||||||||||| |||||| ||  ||||||||||||||||||||| |||||    
T  14271184 atcttagaactttaacctataactacttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctaga 14271265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 23868604 - 23868516
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    ||||| |||| || |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  23868604 ataaacagaggttcatcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacatac 23868516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 24519757 - 24519684
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||| |||||||||||| ||||| ||| || |||||||||| |||||| ||| |||||||    
T  24519757 aaatagaggttcatcttaaaaccctagcctaaaaagatttagttgcacatggtaactaaagacaaactacaaaa 24519684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 24722724 - 24722644
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  24722724 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 24722644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 18829504 - 18829564
Alignment:
Q  32 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||||||||| |||| ||||||||| |||| || |||||  |||||||||||||||||    
T  18829504 tcttagaaccctaccctaaaaagaattagttacgcaaggtaacaaaagataaattacaaaa 18829564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 23857524 - 23857596
Alignment:
Q  140 aataacgggtaatatttaattatttccttaaaa-cctcccatgcaattgatatataaaatcacaagttaataa 211  Q
    |||||||  ||| ||||||||||||  |||||| ||| ||||| |||||||||| ||||||||||||||||||    
T  23857524 aataacgcataagatttaattatttttttaaaaaccttccatgtaattgatatacaaaatcacaagttaataa 23857596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 30487172 - 30487248
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaaga 95  Q
    |||||||| |||||||||||||| || |||| ||||| ||| |||| |||  ||| |||||| ||||||||||||||    
T  30487172 aaatagaggtttatcttagaaccataacctaaaaagatttagttactcatcataactaaagacaaattacaaaaaga 30487248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 25233333 - 25233427
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||| || |||||||||| ||| |||| ||||| ||| ||||||||||||| ||||   |||||||  |||||||||||||||| |||||    
T  25233333 ataaaaagaggttcatcttagaactctaacctaaaaagatttagttacacatggtaactaaaagcaaattac-taaagataaaaacataccctaga 25233427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 29381428 - 29381334
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||| || |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||| ||||||| |||||    
T  29381428 ataaacagaggttcatcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataataacataccctaga 29381334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 24109802 - 24109714
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||||  || |||||||||| ||| |||| ||||| ||| ||||||||| ||| |||| ||||||||  ||| |||||||||||||    
T  24109802 ataaatagatgttcatcttagaactctaacctaaaaagatttagttacacatgctaactaaaaataaattattaaa-gataaaaacatac 24109714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 24389065 - 24389124
Alignment:
Q  46 cctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||| ||||||||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  24389065 cctaaaaagaattagttacacatggtaactaaaaaaaaattac-taaagataaaaacatac 24389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 26121677 - 26121764
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||| || |||||||||||||| |||| ||||| ||| |||||||| |||| |||||| |||||||||||||||||||||||||    
T  26121677 aaatagaggttcatcttagaaccctatcctaaaaagatttagttacacattgtaactaaagacaaattacaaaaagataaaaacatac 26121764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 19762368 - 19762295
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| |||||||||||||||||||||| ||| | ||| |||| |||||||| |||| | |||||||||||    
T  19762368 aaatagaggtttatcttagaaccctagcctaaaaatatttagttacccatggtaactaaaaacaaattacaaaa 19762295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 14216780 - 14216680
Alignment:
Q  142 taacgggtaatatttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaattgagctaaaattttggcgcaatttactc 241  Q
    ||||| |||| ||||||||||||  |||||| ||||| || |||||||||| |||||||||| |||| ||| ||||||  ||||| | | ||||||||||    
T  14216780 taacgcgtaagatttaattattttattaaaatctcccgtgtaattgatatacaaaatcacaaattaacaaaatgagctgcaatttggccacaatttactc 14216681  T
Q  242 t 242  Q
    |    
T  14216680 t 14216680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 24659085 - 24658999
Alignment:
Q  25 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||||||||| ||| |||| ||||| ||| | ||||||||||| |||| |||||||||||||| | |||||||||| |||||    
T  24659085 agattcatcttagaactctaacctaaaaagatttagtaacacatggtaactaaaaataaattacaaaaa-agaaaaacataccctaga 24658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 18227010 - 18227072
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaa 93  Q
    |||||||||||||||||||  |||| |||  ||| |||||||| |||||||||||||||||||    
T  18227010 atcttagaaccctagcctaacaagatttagctactcatggtaactaaagataaattacaaaaa 18227072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 24341156 - 24341083
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 105  Q
    |||||||||||||||| |||||| | ||| ||||||||| ||||| |||| ||| ||| ||||||||||||||||    
T  24341156 atcttagaaccctagcatataaatatttagttacacatgataatt-aagacaaaatacgaaaagataaaaacata 24341083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 13692935 - 13693008
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||||||||||||| || ||||  ||| |||| |||||||| |||||| |||||||||||    
T  13692935 aaatagaggttcatcttagaaccctagcgtaaaaagttttagttactcatggtaactaaagacaaattacaaaa 13693008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 17831025 - 17831106
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaa 100  Q
    |||||||| || |||||||||||||| |||| ||||| ||| |||| |||| ||| ||| ||||||||||||| | ||||||    
T  17831025 aaatagaggttcatcttagaaccctaacctaaaaagatttagttactcatgataactaaggataaattacaaacaaataaaa 17831106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 18831518 - 18831599
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||||||  | ||| |||||||| |||| |||||| ||  ||||||||||||||||||||| |||||    
T  18831518 atcttagaactctaacctataactatttagttacacatcgtaactaaagacaagatacaaaaagataaaaacataccctaga 18831599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 28254178 - 28254264
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa-agataaaaacata 105  Q
    ||||||| || || ||| || ||||| ||| ||||| ||| |||| |||||||| |||||||||||||||||| | |||||||||||    
T  28254178 aatagaggttcattttataaacctaggctaaaaagatttagttactcatggtaactaaagataaattacaaaagaaataaaaacata 28254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 16522625 - 16522545
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| |||||| |||||| |||| | ||||||| ||| ||||||||||||| |||||    
T  16522625 atcttagaacgctaacctaaaaagatttagttacacgtggtaactaaaaacaaattactaaa-gataaaaacataccctaga 16522545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 20859695 - 20859775
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||| | ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  20859695 atcttagaactctaacctaaaaaaatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 20859775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 24188242 - 24188315
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || ||||||||| ||||||||| || || ||| |||| |||||||| |||| | |||||||||||    
T  24188242 aaatagaggttcatcttagaatcctagcctaaaacgatttagttacccatggtaactaaaaacaaattacaaaa 24188315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 24264526 - 24264458
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaa 100  Q
    |||||||||||||||| |||||| | ||| ||||||||| ||||| |||| ||| ||| |||||||||||    
T  24264526 atcttagaaccctagcatataaatatttagttacacatgataatt-aagacaaaatacgaaaagataaaa 24264458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 28665808 - 28665888
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| ||||   |||||||  |||||||||||||||| |||||    
T  28665808 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaatcaaattac-taaagataaaaacataccctaga 28665888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 18938908 - 18938952
Alignment:
Q  61 ttacacatggtaattaaagataaattacaaaaagataaaaacata 105  Q
    ||||||||||||| |||||| ||  ||||||||||||||||||||    
T  18938908 ttacacatggtaactaaagacaagatacaaaaagataaaaacata 18938952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 23388305 - 23388218
Alignment:
Q  24 gagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||| |||||||||| ||| |||| ||||| | | ||||||||||||| |||| | ||| |||  |||||||||||||||| |||||    
T  23388305 gagattcatcttagaactctaacctaaaaagattcagttacacatggtaactaaaaacaaactac-taaagataaaaacataccctaga 23388218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 9898683 - 9898590
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||| || |||||||||||||||| |||||| |  || |||||| |||||| |||||||||| ||||||||||||||| ||||| |||||    
T  9898683 aaatagaggttcatcttagaaccctagcttataaacatctagttacacgtggtaactaaagataaagtacaaaaagataaaatcataccctaga 9898590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 21687942 - 21687850
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||| || ||||||||||||||||||||||| |  || ||||||||| ||| | |||| ||| ||||||||| ||||||||||| |||||    
T  21687942 aaatagaggttcatcttagaaccctagcctataaatatctagttacacatgataact-aagacaaaatacaaaaaggtaaaaacataccctaga 21687850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 22409353 - 22409265
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||||| || |||||| ||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  22409353 ataaatagaggttcatcttataactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacatac 22409265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 10504514 - 10504586
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || |||||| ||| |||||||| ||||| ||| |||||||||| || ||||||||||||||||||    
T  10504514 aatagaggttcatcttataacgctagcctaaaaagatttagttacacatggcaactaaagataaattacaaaa 10504586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 32759373 - 32759445
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || |||||||||||||| |||| ||||| ||| ||||||| ||||| |||||| |||||||||||    
T  32759373 aatagaggttcatcttagaaccctatcctaaaaagatttacttacacacggtaactaaagacaaattacaaaa 32759445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 14075762 - 14075856
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||| ||||| ||||||| ||| |||| ||||| ||| ||||||||||||||| || | |||||||  |||||||||||||||| |||||    
T  14075762 ataaacagaggtttattttagaactctaacctaaaaagatttatttacacatggtaattgaaaacaaattac-taaagataaaaacatactctaga 14075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 2587641 - 2587715
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaa 93  Q
    |||||||| || ||||||||||||||||||| | ||| ||| |||| |||||||| |||| | ||||||||||||    
T  2587641 aaatagaggttcatcttagaaccctagcctaaacagatttagttacccatggtaactaaaaacaaattacaaaaa 2587715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 34479456 - 34479549
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||||||| |||||||||||| | |||| ||||  ||| |||| |||||||| |||||| |||||||||||  |  ||| |||||||||||    
T  34479456 aaatagagattcatcttagaacccaaccctaaaaaggtttatttactcatggtaactaaagacaaattacaaaagaaataaagcatacgctaga 34479549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 14078547 - 14078460
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 105  Q
    |||||||||| || |||||| ||| ||| | |||||||||||| ||| ||||||||| |||| | |||||||  |||||||||||||||    
T  14078547 ataaatagaggttcatcttaaaactctaacttataaagaattagttaaacatggtaagtaaaaacaaattac-taaagataaaaacata 14078460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 9519095 - 9519146
Alignment:
Q  61 ttacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  9519095 ttacacatggtaactaaaaacaaattactaaaagataaaaacatacactaga 9519146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 14726483 - 14726556
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||||||| |||||||| || || ||| |||| |||||||| |||| | |||||||||||    
T  14726483 aaatagaggttcatcttagaacactagcctaaaaggatttagttactcatggtaactaaaaacaaattacaaaa 14726556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 19245596 - 19245692
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 105  Q
    ||||| || |||| ||||| || |||||| |||||||||||||||| |  || ||||||||| ||||| |||| ||| || | |||||||||||||||    
T  19245596 tccaacaaaataagtagaggttcatcttaaaaccctagcctataaatatctagttacacatgataatt-aagacaaaatatagaaagataaaaacata 19245692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 16360833 - 16360914
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataa 98  Q
    |||||||||| || ||||||||||||||||||||||| |  || ||||||||||||| |||||| ||| |||||||||||||    
T  16360833 ataaatagaggttcatcttagaaccctagcctataaatatctagttacacatggtaactaaagacaaaatacaaaaagataa 16360914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 27116918 - 27116833
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaac 102  Q
    |||||||||| || |||||||||||||||| || ||| | ||| ||||||||||||| |||||| ||||| |||||||||||||||    
T  27116918 ataaatagaggttcatcttagaaccctagcttaaaaatatttagttacacatggtaactaaagacaaatttcaaaaagataaaaac 27116833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 22621211 - 22621286
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaag 94  Q
    |||||||| || || |||||||||||||||| ||||| ||| ||||||||||||| |||||| |||||||||||||    
T  22621211 aaatagaggttcattttagaaccctagcctaaaaagatttagttacacatggtaaataaagacaaattacaaaaag 22621286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 10063763 - 10063690
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || ||||||||||||||||||| ||||| ||| |||  |||||||| |||||| |||||||||||    
T  10063763 aaatagaggttcatcttagaaccctagcctaaaaagatttagttattcatggtaactaaagacaaattacaaaa 10063690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 23035768 - 23035664
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacg 107  Q
    ||||| || ||||| |||| || |||||||||| ||| |||||||  | ||| ||||||||||||| |||||| ||  |||||||| ||||||||||||     
T  23035768 tccaacaaaataaacagaggttcatcttagaactctaacctataactacttagttacacatggtaactaaagacaacatacaaaaatataaaaacatacc 23035669  T
Q  108 ctaga 112  Q
    |||||    
T  23035668 ctaga 23035664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 28009139 - 28009233
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| || |||||||||  ||| |||| ||||| ||| ||||||||||||  |||| |||||||||  |||||||||||||||| |||||    
T  28009139 ataaatagaggttcatcttagaatactaacctaaaaagatttagttacacatggtagctaaaaataaattac-taaagataaaaacataccctaga 28009233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 18528311 - 18528218
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctag 111  Q
    ||||| |||| || |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||| ||||| ||||    
T  18528311 ataaacagaggttcatcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaagcataccctag 18528218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 13267170 - 13267258
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||||| || |||||| ||  ||| |||| ||||||||| ||||||||||||| |||| |||||||||  || |||||||||||||    
T  13267170 ataaatagaggttcatcttataattctaacctaaaaagaattagttacacatggtaactaaaaataaattac-taaggataaaaacatac 13267258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 15527602 - 15527521
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||||||  | ||| ||| ||||||||| |||||| ||  ||||||||||||||||||||| |||||    
T  15527602 atcttagaactctaacctataactatttagttatacatggtaactaaagacaagatacaaaaagataaaaacataccctaga 15527521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 17443210 - 17443283
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || ||||||||||||| ||||| ||||| ||| |||| |||||| | |||||| |||||||||||    
T  17443210 aaatagaggttcatcttagaaccctggcctaaaaagatttagttacccatggtgactaaagacaaattacaaaa 17443283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 21333818 - 21333738
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||| ||||| |||||    
T  21333818 atcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaagcataccctaga 21333738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 33191713 - 33191793
Alignment:
Q  25 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    ||||| ||||||||||| ||||||||||| |  || |||||| || ||||||| || ||| |||||||||||||||||||||    
T  33191713 agattcatcttagaaccgtagcctataaatatctagttacacgtgataattaa-gacaaaatacaaaaagataaaaacatac 33191793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 15812207 - 15812132
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacat-ggtaattaaagataaattacaaaaagataaaaacata 105  Q
    |||||||||| ||| |||||||  ||||| ||||| || ||||| |||||||||  ||||||||||||||||||||    
T  15812207 atcttagaactctaacctataactaattagttacaaattggtaactaaagataagatacaaaaagataaaaacata 15812132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 21983787 - 21983713
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  21983787 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacatac 21983713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 26612117 - 26612027
Alignment:
Q  21 atagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||| || |||||||||| ||| |||| ||||| ||| ||| ||||||||| |||| | ||||||| ||| ||||||||||||| |||||    
T  26612117 atagaggttcatcttagaactctatcctaaaaagatttagttaaacatggtaactaaaaacaaattactaaa-gataaaaacataccctaga 26612027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 31235040 - 31234946
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||  | ||||||| ||| |||||||||||||| | |||||||||||||||| | |||| |   |||||||||||||||| |||||    
T  31235040 ataaatagaggttcgttttagaactctaacctataaagaattagtaacacatggtaattaaaaacaaatca-gtaaagataaaaacataccctaga 31234946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 15543085 - 15542992
Alignment:
Q  18 taaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||||  || |||||||||| ||| | || ||||||||||||| |||||||||  ||| | |||||||  |||||||||||||||| |||||    
T  15543085 taaatagaagttcatcttagaactctaacgtaaaaagaattaattatacatggtaacaaaaaacaaattac-taaagataaaaacataccctaga 15542992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 18735306 - 18735226
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  ||||||||||||| || |||||    
T  18735306 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacaaaccctaga 18735226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 24055020 - 24055100
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| | || ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  24055020 atcttagaactctaacataaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 24055100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 17120623 - 17120531
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaa 100  Q
    ||||| || ||||| |||| || |||||| |||| || |||| ||||| ||  ||||||||||||| |||||| ||||||  |||||||||||    
T  17120623 tccaacaaaataaacagaggttcatcttataaccataacctaaaaagattttgttacacatggtaactaaagaaaaattaacaaaagataaaa 17120531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 21450117 - 21450196
Alignment:
Q  32 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||||| ||| |||| ||||| ||| ||||||||||||  |||| |||||||||  ||||||||||| |||| |||||    
T  21450117 tcttagaactctaacctaaaaagatttagttacacatggtacctaaaaataaattac-taaagataaaaatataccctaga 21450196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 6476261 - 6476177
Alignment:
Q  142 taacgggtaatatttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaattgagctaaaattt 226  Q
    ||||| |||| |||||||||||| |||||||||| || || |||||||||| ||||||| | ||||||||||||||||| |||||    
T  6476261 taacgagtaagatttaattattttcttaaaaccttccgtgtaattgatatacaaaatcagaggttaataaattgagctacaattt 6476177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 23699216 - 23699129
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 104  Q
    |||||||||| || ||||||||||| || |||| ||| | ||||||||||||||||| |||| | ||||||| |||||||||||||||    
T  23699216 ataaatagaggttcatcttagaaccataacctaaaaatatttaattacacatggtaactaaaaacaaattactaaaagataaaaacat 23699129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 23717671 - 23717584
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 104  Q
    |||||||||| || ||||||||||| || |||| ||| | ||||||||||||||||| |||| | ||||||| |||||||||||||||    
T  23717671 ataaatagaggttcatcttagaaccataacctaaaaatatttaattacacatggtaactaaaaacaaattactaaaagataaaaacat 23717584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 23736127 - 23736040
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 104  Q
    |||||||||| || ||||||||||| || |||| ||| | ||||||||||||||||| |||| | ||||||| |||||||||||||||    
T  23736127 ataaatagaggttcatcttagaaccataacctaaaaatatttaattacacatggtaactaaaaacaaattactaaaagataaaaacat 23736040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 6745701 - 6745779
Alignment:
Q  148 gtaatatttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaattgagctaaaattt 226  Q
    |||| |||||||||||| ||||||| || || || |||||||||| ||||| ||||||||||||||||||||| |||||    
T  6745701 gtaagatttaattattttcttaaaatcttccgtgtaattgatatacaaaattacaagttaataaattgagctacaattt 6745779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 31285080 - 31284974
Alignment:
Q  6 tgtccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 105  Q
    ||||||| || |||||||||| || ||||||||||| || | ||  |||| ||| ||||||| ||||| |||||| ||||||| |||||||||||| |||    
T  31285080 tgtccaacaaaataaatagaggttcatcttagaaccataacataataagatttagttacacaaggtaactaaagacaaattactaaaagataaaaatata 31284981  T
Q  106 cgctaga 112  Q
    | |||||    
T  31284980 ccctaga 31284974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 19575297 - 19575209
Alignment:
Q  23 agagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||| |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  19575297 agagattcatcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacatacactaga 19575209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 2166735 - 2166653
Alignment:
Q  29 ttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||||  ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  2166735 ttatcttagaattctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 2166653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 3115470 - 3115395
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||||| ||| |||||||  | ||| ||||||||| |||||||||| ||  |||||||||||||||||||||    
T  3115470 atcttagaactctaacctataactacttagttacacatgataattaaagacaagatacaaaaagataaaaacatac 3115395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 6516350 - 6516307
Alignment:
Q  183 aattgatatataaaatcacaagttaataaattgagctaaaattt 226  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  6516350 aattgatatacaaaatcacaagttaataaattgagctacaattt 6516307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 16244790 - 16244696
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| || |||||||||| ||| |||| ||||||||| ||||||||| ||| |||| | ||||| | ||| ||||||||||||| |||||    
T  16244790 ataaatagaggttcatcttagaactctaacctaaaaagaattagttacacatgataactaaaaacaaattcctaaa-gataaaaacataccctaga 16244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 23755174 - 23755087
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 104  Q
    |||||||||| || ||||||||||| || |||| ||| | ||| ||||||||||||| |||| | ||||||  |||||||||||||||    
T  23755174 ataaatagaggttcatcttagaaccataacctaaaaatatttagttacacatggtaactaaaaacaaattaataaaagataaaaacat 23755087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 2722944 - 2722860
Alignment:
Q  22 tagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacg 107  Q
    ||||| || ||||||||||||||||||||||| |  || ||||| ||| ||| | |||| ||| ||||||||||||||||||||||    
T  2722944 tagaggttcatcttagaaccctagcctataaatatctagttacatatgataact-aagacaaaatacaaaaagataaaaacatacg 2722860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 23055340 - 23055279
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||| |||||||||||| ||||| ||| |||| |||||||| |||||| |||||||||||    
T  23055340 atcttacaaccctagcctaaaaagacttagttactcatggtaactaaagacaaattacaaaa 23055279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 26092229 - 26092302
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||||||||||| ||||  |||  ||| |||| ||||||||||||| |||||||||||||    
T  26092229 aaatagaggttcatcttagaaccctaccctaataaggtttatttactcatggtaattaaatataaattacaaaa 26092302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 8144493 - 8144589
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 104  Q
    ||||| || |||||||||  || ||||||||| | || |||  ||||| ||| |||||||| |||| |||||| ||||||| |||||||||||||||    
T  8144493 tccaacaaaataaatagaagttcatcttagaatcataacctcaaaagatttagttacacattgtaactaaagacaaattactaaaagataaaaacat 8144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 12771986 - 12771899
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 105  Q
    |||||||||| || |||||||||  ||| |||| |||||| || ||||||||||||| |||| |||||||||  | |||||||||||||    
T  12771986 ataaatagaggttcatcttagaattctaacctaaaaagaactagttacacatggtaactaaaaataaattac-tatagataaaaacata 12771899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 28369562 - 28369490
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || |||||||||||| |||||| ||||| ||| |||| |||||||| |||||| |||||| ||||    
T  28369562 aatagaggttaatcttagaacccaagcctaaaaagatttagttacccatggtaactaaagagaaattataaaa 28369490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 28377380 - 28377308
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || |||||||||||| |||||| ||||| ||| |||| |||||||| |||||| |||||| ||||    
T  28377380 aatagaggttaatcttagaacccaagcctaaaaagatttagttacccatggtaactaaagagaaattataaaa 28377308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 28385202 - 28385130
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || |||||||||||| |||||| ||||| ||| |||| |||||||| |||||| |||||| ||||    
T  28385202 aatagaggttaatcttagaacccaagcctaaaaagatttagttacccatggtaactaaagagaaattataaaa 28385130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 16229079 - 16229005
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||||| ||| |||| ||||| ||||||||||||||||| ||||   |||||||  ||||||||||||||||    
T  16229079 atcttagaactctaacctaaaaagatttaattacacatggtaactaaaagcaaattac-taaagataaaaacatac 16229005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 6475619 - 6475680
Alignment:
Q  153 atttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaatt 214  Q
    |||||||||||| ||||||| ||| |||| |||||||| | | |||||||| ||||||||||    
T  6475619 atttaattatttgcttaaaatctcgcatgtaattgatacacacaatcacaacttaataaatt 6475680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 6515728 - 6515789
Alignment:
Q  153 atttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaatt 214  Q
    |||||||||||| ||||||| ||| |||| |||||||| | | |||||||| ||||||||||    
T  6515728 atttaattatttgcttaaaatctcgcatgtaattgatacacacaatcacaacttaataaatt 6515789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 6746337 - 6746276
Alignment:
Q  153 atttaattatttccttaaaacctcccatgcaattgatatataaaatcacaagttaataaatt 214  Q
    |||||||||||| ||||||| ||| |||| |||||||| | | |||||||| ||||||||||    
T  6746337 atttaattatttgcttaaaatctcgcatgtaattgatacacacaatcacaacttaataaatt 6746276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 8116012 - 8115932
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| |||||||||||||  ||| | |||||||  |||||||||||||||| |||||    
T  8116012 atcttagaactctaacctaaaaagatttagttacacatggtaacaaaaaaaaaattac-taaagataaaaacataccctaga 8115932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 20022639 - 20022559
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| || || ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  20022639 atcttagaactctaacctaaaatgatttagttacacatggtaactaaacacaaattac-taaagataaaaacataccctaga 20022559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 20886168 - 20886229
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||||||| ||||||| ||| | ||| |||| |||||||| |||||| |||||||||||    
T  20886168 atcttagaaccttagcctaaaaatatttagttactcatggtaactaaagacaaattacaaaa 20886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 12373016 - 12372957
Alignment:
Q  52 aagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||| ||| ||||||||||||| |||||| |||||||  |||||||||||||||| |||||    
T  12373016 aagatttagttacacatggtaaataaagacaaattac-taaagataaaaacataccctaga 12372957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 16582 - 16676
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||||||||||||||||| ||| |||  ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  16582 ataaacagagatttatcttagaactctaacctcaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 16676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 9134122 - 9134216
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| || |||||||||| ||| |||| ||||||||| ||| ||||||||| |||| | ||||||| ||| |||||||||||||||||||    
T  9134122 ataaatagaggttcatcttagaactctaacctaaaaagaattagttatacatggtaactaaaaacaaattactaaa-gataaaaacatacgctaga 9134216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 12330386 - 12330474
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    ||||| |||| || |||||||||| ||| |||| ||||||||| ||||||||||||| |||| |||||||||  ||||||||||||||||    
T  12330386 ataaacagaggttcatcttagaactctaacctaaaaagaattagttacacatggtaactaaaaataaattac-taaagataaaaacatac 12330474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 18362782 - 18362691
Alignment:
Q  14 aatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||| |||| ||||||||||||| ||| |||| ||| ||||| ||||||||||||| |||| | |||||||  ||||||||||||||||    
T  18362782 aatataaacagaggtttatcttagaactctaacctaaaaataattagttacacatggtaactaaaaacaaattac-taaagataaaaacatac 18362691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 6006992 - 6007090
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    ||||| || |||||||||| || ||||||||||| || ||||  |||| ||| ||||||||||||| |||||| ||||||   ||||||||||||||||    
T  6006992 tccaacaaaataaatagaggttcatcttagaaccataacctaataagatttagttacacatggtaactaaagacaaattatttaaagataaaaacatac 6007090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 9501307 - 9501377
Alignment:
Q  22 tagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||| || ||||||||||||||||||| ||||| |||||||| |||||||| |||| |||||| ||||||    
T  9501307 tagaggttcatcttagaaccctagcctaaaaagatttaattacccatggtaactaaaaataaatcacaaaa 9501377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 18448941 - 18449002
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||||||||||| ||| ||||| ||| ||||||||||||| |||||| |||||||||||    
T  18448941 atcttagaaccctagactaaaaagatttagttacacatggtaactaaagacaaattacaaaa 18449002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 8310563 - 8310472
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||||||||||||||||||||||| |  || ||||||||| ||| | |||  ||| ||||||||||||||||| ||| |||||    
T  8310563 aatagagattcatcttagaaccctagcctataaatatctagttacacatgataact-aaggcaaaatacaaaaagataaaaacctactctaga 8310472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 8053182 - 8053088
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||| || |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  ||||||| |||||||| |||||    
T  8053182 ataaacagaggttcatcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagatagaaacataccctaga 8053088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 8978073 - 8977979
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||| || |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  8978073 ataaacagaggttcatcttagaactctaacctaaaaagatttagttacacatggtaactaaaaaaaaattac-taaagataaaaacataccctaga 8977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 25692119 - 25692192
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 105  Q
    |||||||||  ||| |||| ||||||||| ||||||||||||| |||| |||||||||  |||||||||||||||    
T  25692119 atcttagaattctaacctaaaaagaattagttacacatggtaactaaaaataaattac-taaagataaaaacata 25692192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 9917509 - 9917590
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||||||||||| ||| ||| | ||| | ||||||||||| |||||| |||||||||||| |  ||||||||| |||||    
T  9917509 atcttagaaccctagtctaaaaatatttagtcacacatggtaactaaagacaaattacaaaaaaaataaaacataccctaga 9917590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 9925421 - 9925502
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||||||||||| ||| ||| | ||| | ||||||||||| |||||| |||||||||||| |  ||||||||| |||||    
T  9925421 atcttagaaccctagtctaaaaatatttagtcacacatggtaactaaagacaaattacaaaaaaaataaaacataccctaga 9925502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 23297695 - 23297775
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  23297695 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacatacactaga 23297775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 39272221 - 39272141
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  39272221 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 39272141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 9288244 - 9288328
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||| |||||| ||| ||||| |||||||||||||||| || ||| | ||| |||| |||||||| |||| |||| ||||||||    
T  9288244 tccaaaaatatatatatagattcatcttagaaccctagcttaaaaatatttagttacccatggtaactaaaaataacttacaaaa 9288328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 9298036 - 9298120
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||| |||||| ||| ||||| |||||||||||||||| || ||| | ||| |||| |||||||| |||| |||| ||||||||    
T  9298036 tccaaaaatatatatatagattcatcttagaaccctagcttaaaaatatttagttacccatggtaactaaaaataacttacaaaa 9298120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 10938600 - 10938672
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || ||||||||||||||||||| ||||| ||| ||||  | ||||| |||||| |||||||||||    
T  10938600 aatagaggttcatcttagaaccctagcctaaaaagatttagttacttagggtaactaaagacaaattacaaaa 10938672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 13708474 - 13708546
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || ||||||||||||||||||| | ||| ||| |  |||||||||| |||||| |||||||||||    
T  13708474 aatagaggttcatcttagaaccctagcctacagagatttagtatcacatggtaactaaagacaaattacaaaa 13708546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 21884368 - 21884296
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || || |||||||| ||||||| ||||| ||| |||| |||||||| |||||| |||||||||||    
T  21884368 aatagaggttcatgttagaaccttagcctaaaaagatttagttactcatggtaactaaagacaaattacaaaa 21884296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 4820217 - 4820303
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacat 104  Q
    |||||||||| || ||||| |||| | | |||| ||||||||| ||||||||||||| |||| | |||||||  ||||||||||||||    
T  4820217 ataaatagaggttcatcttcgaactccaacctaaaaagaattagttacacatggtaaataaaaacaaattac-taaagataaaaacat 4820303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 19154261 - 19154336
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||||| ||| |||||||  | ||| ||||||||||||| |||||| |   |||||||||||||||||||||    
T  19154261 atcttagaactctaacctataactacttagttacacatggtaactaaagacatgatacaaaaagataaaaacatac 19154336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 20753660 - 20753735
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||||| ||| |||||||  | ||| ||||||||||||| |||||| |   |||||||||||||||||||||    
T  20753660 atcttagaactctaacctataactacttagttacacatggtaactaaagacatgatacaaaaagataaaaacatac 20753735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 2565483 - 2565563
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||| | ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  2565483 atcttagacctctaacctaaaaagatttatttacacatggtaactaaaaacaaattac-gaaagataaaaacataccctaga 2565563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 2570322 - 2570277
Alignment:
Q  61 ttacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||    
T  2570322 ttacacatggtaactaaagacaagatacaaaaagataaaaacatac 2570277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 2573736 - 2573691
Alignment:
Q  61 ttacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||    
T  2573736 ttacacatggtaactaaagacaagatacaaaaagataaaaacatac 2573691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 6014523 - 6014623
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacg 107  Q
    ||||| || ||||||| || || |||||| ||| |||||||||||| |  || ||||||||  ||| ||| || ||| ||||||||||||||||||||||    
T  6014523 tccaacaaaataaataaaggttcatcttataacgctagcctataaatatctagttacacatcataactaa-gacaaaatacaaaaagataaaaacatacg 6014621  T
Q  108 ct 109  Q
    ||    
T  6014622 ct 6014623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 21502198 - 21502271
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||||||||||||| || ||||| ||| ||||  ||||||| |||| | |||||||||||    
T  21502198 aaatagaggttcatcttagaaccctagcgtaaaaagatttagttaccaatggtaactaaaaacaaattacaaaa 21502271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 22468314 - 22468387
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||||||||||| |||| ||||| ||| |||| | |||||| |||| | |||||||||||    
T  22468314 aaatagaggttcatcttagaaccctatcctaaaaagatttagttacccttggtaactaaaaacaaattacaaaa 22468387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 3586285 - 3586225
Alignment:
Q  18 taaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaa 78  Q
    ||||||||| || |||||||||| ||| |||| ||||| ||| ||||||||||||| ||||    
T  3586285 taaatagaggttcatcttagaactctaacctaaaaagatttagttacacatggtaactaaa 3586225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 5221782 - 5221710
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || |||||||||| |||||||| ||||| ||| |||| ||||||||  ||| | |||||||||||    
T  5221782 aatagaggttcatcttagaactctagcctaaaaagatttagttacccatggtaacaaaaaacaaattacaaaa 5221710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 6040098 - 6040022
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaaga 95  Q
    |||||||| || |||||| |||||||||||| ||| | ||| |||| |||||||| |||| | |||||| |||||||    
T  6040098 aaatagaggttcatcttaaaaccctagcctaaaaatatttagttactcatggtaactaaaaacaaattaaaaaaaga 6040022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 20175169 - 20175264
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||  || ||||||||||||||||||| ||||| |||  |||||||||||| |||||| |||||||||||||| |  ||||||| |||||    
T  20175169 ataaatagacgttcatcttagaaccctagcctaaaaagatttagctacacatggtaactaaagacaaattacaaaaagaaatgaacataccctaga 20175264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 26652433 - 26652360
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| ||||||||| |||||||||||| ||||| ||| |||| |||||||| |||||| |||||||||||    
T  26652433 aaatagaggtttatcttaaaaccctagcctaaaaagatttagttactcatggtaactaaagacaaattacaaaa 26652360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 25886964 - 25886870
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||| ||||| || |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  25886964 ataattagaggttcatcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 25886870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 27908238 - 27908144
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||| || |||||||||| ||| |||| ||||| ||| ||||||||||||| |||||| |||||||  |||||||||||||||| |||||    
T  27908238 ataaacagaggttcatcttagaactctaacctaaaaagatttagttacacatggtaactaaagacaaattac-taaagataaaaacataccctaga 27908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 24089974 - 24089894
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| |||||||||  |||||||||||||||| |||||    
T  24089974 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaataaattac-taaagataaaaacataccctaga 24089894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 13777474 - 13777546
Alignment:
Q  34 ttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    ||||||| ||| |||||||  | ||| ||||||||||||| |||||||||  |||||||||||||||||||||    
T  13777474 ttagaactctaacctataagtatttagttacacatggtaactaaagataagatacaaaaagataaaaacatac 13777546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 23010851 - 23010765
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||| || ||||||||||||| ||||||||| |  || ||||||||| ||| | |||| ||| |||||||||||||||||||||    
T  23010851 aaatagaggttcatcttagaaccctggcctataaatatctagttacacatgataact-aagacaaaatacaaaaagataaaaacatac 23010765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 8502245 - 8502173
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || |||||||||||||||||||  |||| |||  ||| |||||||| |||||| |||||||||||    
T  8502245 aatagaggttcatcttagaaccctagcctaacaagatttagctacccatggtaactaaagacaaattacaaaa 8502173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 32086378 - 32086448
Alignment:
Q  34 ttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacata 105  Q
    |||||||||||||||||||| |  || ||||||||| ||| ||| || ||| ||||||||||||||||||||    
T  32086378 ttagaaccctagcctataaatatctagttacacatgataactaa-gacaaaatacaaaaagataaaaacata 32086448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 17350387 - 17350457
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaatta 87  Q
    ||||| |||| || |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | ||||||    
T  17350387 ataaacagaggttcatcttagaactctaacctaaaaagaattagttacacatggtaactaaaaacaaatta 17350457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 17629467 - 17629387
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||  ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  17629467 atcttagaattctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 17629387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 17674759 - 17674679
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||  ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  17674759 atcttagaattctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 17674679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 25921874 - 25921954
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| | ||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  25921874 atcttagaacactatcctaaaaagatttagtaacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 25921954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 28929673 - 28929769
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaa-gaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctagat 113  Q
    ||||| |||| || |||||||||| ||| |||| ||| |||||| ||||||||||||| |||| | ||||| |  |||||||||||||||| ||||||    
T  28929673 ataaacagaggttcatcttagaactctaacctaaaaaagaattagttacacatggtaactaaaaacaaattgc-taaagataaaaacataccctagat 28929769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 34368684 - 34368756
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| ||||||||||||  |||||||| ||||  ||| |||| |||||||| |||| | |||||||||||    
T  34368684 aatagaggtttatcttagaattctagcctaaaaaggtttagttactcatggtaactaaaaacaaattacaaaa 34368756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 244608 - 244504
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacg 107  Q
    ||||| || |||||||||| || ||||||||||| ||  |||  |||| ||| ||||||||||||| |||| | ||||||| |||||||||||||||||     
T  244608 tccaacaaaataaatagaggttcatcttagaaccataatctaataagatttagttacacatggtaactaaacacaaattactaaaagataaaaacataca 244509  T
Q  108 ctaga 112  Q
    |||||    
T  244508 ctaga 244504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 14572768 - 14572872
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacg 107  Q
    ||||| || |||||||||| || ||||||||||| ||  |||  |||| ||| ||||||||||||| |||| | ||||||| |||||||||||||||||     
T  14572768 tccaacaaaataaatagaggttcatcttagaaccataatctaataagatttagttacacatggtaactaaacacaaattactaaaagataaaaacataca 14572867  T
Q  108 ctaga 112  Q
    |||||    
T  14572868 ctaga 14572872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 9264099 - 9264038
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||||||||||||||||||| | ||| |||| |||||||| |||||| |||||||||||    
T  9264099 atcttagaaccctagcctataaatatttagttactcatggtaactaaagacaaattacaaaa 9264038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 15049295 - 15049222
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||||||||||| || | ||||| ||| |||| |||||||| ||||||||||||||||||    
T  15049295 aaatagaggttcatcttagaaccctatccaaaaaagatttagttactcatggtaactaaagataaattacaaaa 15049222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 15105129 - 15105202
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||||||||||| || | ||||| ||| |||| |||||||| ||||||||||||||||||    
T  15105129 aaatagaggttcatcttagaaccctatccaaaaaagatttagttactcatggtaactaaagataaattacaaaa 15105202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 12578075 - 12577972
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacg 107  Q
    ||||| || ||||| |||| || |||||||||| ||| | || ||||| ||| |||||||||||||||||| | |||||||  ||||||||||||||||     
T  12578075 tccaaaaaaataaacagaggttcatcttagaactctaacataaaaagatttagttacacatggtaattaaaaacaaattac-taaagataaaaacatacc 12577977  T
Q  108 ctaga 112  Q
    |||||    
T  12577976 ctaga 12577972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 7583329 - 7583423
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||| || |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  7583329 ataaacagaggttcatcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 7583423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 11781872 - 11781966
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| || |||||||| | ||| ||||  |||||||||||||||||| ||| |||| | |||||||  |||||||||||||||| |||||    
T  11781872 ataaatagaggttcatcttagatctctaacctaacaagaattaattacacatgataactaaaaacaaattac-taaagataaaaacataccctaga 11781966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 15165788 - 15165882
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||||||||| |||||| ||| ||| |||| ||||| ||||||| |||| |||| |||| | ||||||| |||| |||||||||||| |||||    
T  15165788 ataaatagagattcatcttataactctaacctaaaaagatttaattatacattgtaactaaaaacaaattactaaaa-ataaaaacataccctaga 15165882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 5529299 - 5529392
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagata-aaaacatacgctaga 112  Q
    |||||||| || |||||||||||||| |||| ||||| ||| |||| |||||||| |||||| |||||| ||||||| | ||||||||| |||||    
T  5529299 aaatagagtttcatcttagaaccctaacctaaaaagatttagttactcatggtaactaaagacaaatta-aaaaagaaataaaacataccctaga 5529392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 10105628 - 10105708
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| |||  ||| ||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  10105628 atcttagaactctaaactaaaaagaattagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 10105708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 19093589 - 19093681
Alignment:
Q  8 tccaagaatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaa 101  Q
    ||||| || |||||||||| || |||||||||||||| |||||||| |  || ||||||||  ||||| |||| ||| ||||||||||||||||    
T  19093589 tccaacaaaataaatagaggttcatcttagaaccctaacctataaatatctagttacacattataatt-aagacaaaatacaaaaagataaaaa 19093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 19547813 - 19547752
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||||||| ||||||| |||| |||| |||| |||||||| |||||| |||||||||||    
T  19547813 atcttagaaccttagcctaaaaaggattagttactcatggtaactaaagacaaattacaaaa 19547752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 1832673 - 1832613
Alignment:
Q  32 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||||||||||||| ||||| ||| |||  |||||||| |||||| |||||||||||    
T  1832673 tcttagaaccctagcctaaaaagagttagttattcatggtaactaaagacaaattacaaaa 1832613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 18448172 - 18448112
Alignment:
Q  32 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||||||||| |||| ||||| |||||||| |||||||| |||||| |||| ||||||    
T  18448172 tcttagaaccctatcctaaaaagatttaattactcatggtaactaaagacaaataacaaaa 18448112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 23975169 - 23975229
Alignment:
Q  32 tcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||||||||||| || ||||| ||| |||||||||| || |||||| |||||||||||    
T  23975169 tcttagaaccctagcttaaaaagatttagttacacatggcaactaaagacaaattacaaaa 23975229  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 5680225 - 5680323
Alignment:
Q  14 aatataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagat-aaaaacatacgctaga 112  Q
    |||| |||||||| |||||||||||||||||||||||||  |  |  ||||||||| ||| | |||| ||| ||||| ||||| ||||||||||||||||    
T  5680225 aataaaaatagaggtttatcttagaaccctagcctataagtatctggttacacatgataact-aagacaaaatacaacaagataaaaaacatacgctaga 5680323  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 16730604 - 16730698
Alignment:
Q  17 ataaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| || |||||||||| ||| |||| ||| ||||| ||||||||||||| |||| | ||||||   |||||| ||||||||| |||||    
T  16730604 ataaatagaggttcatcttagaactctaacctaaaaataattagttacacatggtaactaaaaacaaatta-ttaaagattaaaacataccctaga 16730698  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 11520234 - 11520173
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||||||||||| || ||||  |||||||  |||||||| |||||| |||||||||||    
T  11520234 atcttagaaccctagcataaaaaggtttaattattcatggtaactaaagacaaattacaaaa 11520173  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 23082975 - 23083048
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    |||||||| || |||||||||||| |||||| ||||| ||| || | |||||||| |||| | |||||||||||    
T  23082975 aaatagaggttaatcttagaacccaagcctaaaaagatttagtttctcatggtaactaaaaacaaattacaaaa 23083048  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 10782882 - 10782954
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || ||||||||||||||||||| ||| | ||| |||  ||| |||| |||||| |||||||||||    
T  10782882 aatagaggttcatcttagaaccctagcctaaaaatatttagttaatcatagtaactaaagaaaaattacaaaa 10782954  T

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Target: scaffold0386 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 14280 - 14197
Alignment:
Q  28 tttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||||||||||||||||||  | ||| ||||||||| |||   |||| ||| |||||||||||||||| ||||||||||    
T  14280 tttatcttagaaccctagcctataagtatttagttacacatgataa-ccaagacaaaatacaaaaagataaaaaaatacgctaga 14197  T

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Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 72993 - 73084
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||||| || |||||||||| ||| |||| ||||||||| ||||||||||||| |||| | |||||||  |||| ||||||||||| |||||    
T  72993 aatagaggttcatcttagaactctaacctaaaaagaattagttacacatggtaactaaaaaaaaattac-taaagttaaaaacataccctaga 73084  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 40611 - 40702
Alignment:
Q  19 aaatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctag 111  Q
    |||||||| ||||||||||||||||| |||||||| |  || ||||||||| ||| | |||| ||| || |||||||||||||||||| ||||    
T  40611 aaatagaggtttatcttagaaccctaacctataaatatctagttacacatgataact-aagacaaaatataaaaagataaaaacataccctag 40702  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 27462 - 27530
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattac 88  Q
    ||||||| || ||||||||||||||||||| ||| | ||| ||||| |||||||||||||| |||||||    
T  27462 aatagaggttcatcttagaaccctagcctaaaaatatttagttacatatggtaattaaagacaaattac 27530  T

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Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 22308 - 22394
Alignment:
Q  25 agatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    ||||| |||||||||| ||| |||| ||| | ||| |||||||||||||||||| | |||||||  |||||||||||||||| |||||    
T  22308 agattcatcttagaactctaacctaaaaatatttagttacacatggtaattaaaaacaaattac-taaagataaaaacataccctaga 22394  T

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Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 53824 - 53904
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| | |||||||  |||||||||||||||| |||||    
T  53824 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaga 53904  T

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Target: scaffold1156 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 592 - 672
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| |||  ||| ||||| ||| ||||||||||||| |||| | ||||||| ||||||||||||||||| |||||    
T  592 atcttagaactctaaactaaaaagatttagttacacatggtaactaaaaacaaattac-aaaagataaaaacataccctaga 672  T

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Target: scaffold0085 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 23351 - 23423
Alignment:
Q  20 aatagagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaa 92  Q
    ||||||| || ||||||||||||||||||| ||||  ||| | || |||||||| |||||| |||||||||||    
T  23351 aatagaggttcatcttagaaccctagcctaaaaagggttagtcactcatggtaactaaagacaaattacaaaa 23423  T

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Target: scaffold1339 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 599 - 644
Alignment:
Q  61 ttacacatggtaattaaagataaattacaaaaagataaaaacatac 106  Q
    |||||||| |||| |||||| |||||||||||| ||||||||||||    
T  599 ttacacatagtaactaaagacaaattacaaaaaaataaaaacatac 644  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 81064 - 81144
Alignment:
Q  31 atcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||| |||| |  ||||||  |||||||||||||||| |||||    
T  81064 atcttagaactctaacctaaaaagatttagttacacatggtaactaaaaaataattac-taaagataaaaacataccctaga 81144  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 4163 - 4250
Alignment:
Q  24 gagatttatcttagaaccctagcctataaagaattaattacacatggtaattaaagataaattacaaaaagataaaaacatacgctaga 112  Q
    |||||| |||||||||| ||| |||| ||||| | | ||||||||||||| |||| | ||| |||  |||||||||||||||| |||||    
T  4163 gagattcatcttagaactctaacctaaaaagattcagttacacatggtaactaaaaacaaactac-taaagataaaaacataccctaga 4250  T

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