View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14594_high_6 (Length: 327)
Name: NF14594_high_6
Description: NF14594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14594_high_6 |
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| [»] chr8 (25 HSPs) |
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| [»] chr4 (24 HSPs) |
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| [»] chr7 (26 HSPs) |
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| [»] chr3 (31 HSPs) |
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| [»] scaffold0078 (1 HSPs) |
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| [»] scaffold0195 (2 HSPs) |
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| [»] chr5 (29 HSPs) |
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| [»] scaffold0025 (2 HSPs) |
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| [»] chr2 (25 HSPs) |
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| [»] scaffold0077 (1 HSPs) |
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| [»] chr6 (17 HSPs) |
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| [»] scaffold0266 (2 HSPs) |
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| [»] chr1 (20 HSPs) |
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| [»] scaffold0049 (1 HSPs) |
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| [»] scaffold0026 (2 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0011 (3 HSPs) |
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| [»] scaffold0175 (1 HSPs) |
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| [»] scaffold0125 (1 HSPs) |
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| [»] scaffold0622 (1 HSPs) |
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| [»] scaffold0215 (2 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0141 (4 HSPs) |
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| [»] scaffold0124 (2 HSPs) |
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| [»] scaffold0302 (1 HSPs) |
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| [»] scaffold0132 (1 HSPs) |
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| [»] scaffold0008 (3 HSPs) |
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| [»] scaffold0498 (1 HSPs) |
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| [»] scaffold0413 (1 HSPs) |
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| [»] scaffold0106 (1 HSPs) |
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| [»] scaffold0075 (1 HSPs) |
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| [»] scaffold0529 (1 HSPs) |
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| [»] scaffold0012 (1 HSPs) |
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| [»] scaffold0218 (1 HSPs) |
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| [»] scaffold0369 (1 HSPs) |
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| [»] scaffold1542 (1 HSPs) |
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| [»] scaffold0001 (3 HSPs) |
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| [»] scaffold0076 (1 HSPs) |
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| [»] scaffold0162 (2 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0139 (2 HSPs) |
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| [»] scaffold0104 (1 HSPs) |
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| [»] scaffold1560 (1 HSPs) |
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| [»] scaffold0116 (1 HSPs) |
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| [»] scaffold0772 (1 HSPs) |
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| [»] scaffold0420 (1 HSPs) |
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| [»] scaffold0066 (1 HSPs) |
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| [»] scaffold0361 (1 HSPs) |
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| [»] scaffold1404 (1 HSPs) |
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| [»] scaffold0018 (1 HSPs) |
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| [»] scaffold0028 (1 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold1711 (1 HSPs) |
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| [»] scaffold0021 (1 HSPs) |
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| [»] scaffold0006 (1 HSPs) |
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| [»] scaffold0032 (1 HSPs) |
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| [»] scaffold0389 (1 HSPs) |
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| [»] scaffold0970 (1 HSPs) |
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| [»] scaffold0240 (1 HSPs) |
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| [»] scaffold0044 (1 HSPs) |
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| [»] scaffold0700 (1 HSPs) |
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| [»] scaffold0123 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 25)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 22907588 - 22907261
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22907588 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac |
22907489 |
T |
 |
| Q |
101 |
aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22907488 |
aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
22907389 |
T |
 |
| Q |
201 |
catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||| |
|
|
| T |
22907388 |
catagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat |
22907289 |
T |
 |
| Q |
300 |
catacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
22907288 |
catacaattattatcaattcatgcatac |
22907261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 83 - 326
Target Start/End: Original strand, 17345540 - 17345784
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| | |||||||||||| |||||||| |||| || ||| || |
|
|
| T |
17345540 |
caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa |
17345639 |
T |
 |
| Q |
183 |
catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac |
280 |
Q |
| |
|
||||| || |||||||||||| |||||||| || | ||| | | |||| |||| ||| ||||||||||||||||||| ||||| |||||| || ||| |
|
|
| T |
17345640 |
tatcaactgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac |
17345738 |
T |
 |
| Q |
281 |
atggaatctaaccaacaatcatacacttattatcaattcatgcata |
326 |
Q |
| |
|
||| || | ||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
17345739 |
atgtgatttcaccaacaatcatacaattatcatcaattcatgcata |
17345784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 5238184 - 5238303
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
5238184 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
5238283 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
5238284 |
tattatcaattcatgcatac |
5238303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 24661414 - 24661295
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
24661414 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
24661315 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
24661314 |
tattatcaattcatgcatac |
24661295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 43685643 - 43685762
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
43685643 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
43685742 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
43685743 |
tattatcaattcatgcatac |
43685762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 24548956 - 24549198
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||| |
|
|
| T |
24548956 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc |
24549055 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| ||||||||| | | ||| | ||| | ||| | | ||||||| | ||| |||| ||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
24549056 |
aattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt |
24549155 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
24549156 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
24549198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 43373761 - 43373515
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | |
|
|
| T |
43373761 |
tttcaccaaaacaccaacaa---ttcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca |
43373665 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
| ||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
43373664 |
tagcatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
43373565 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||| | |||| |||||||||||||||| |
|
|
| T |
43373564 |
aacatgtaatttcaccaacaatcatataattatcatcaattcatgcatac |
43373515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 6774535 - 6774293
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||| ||||||| |||| |||||| |||||||||| |||||||| | |||||||||||| |||||||| | || || ||| |||||| |
|
|
| T |
6774535 |
aaaacaccaacaacaaatcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc |
6774436 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| ||||||||| | ||||| | ||| | ||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
6774435 |
aattgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt |
6774336 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
6774335 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
6774293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 16194005 - 16193763
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
||||||||||||||| ||||||| |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | |||||| |
|
|
| T |
16194005 |
aaaacaccaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc |
16193906 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| |||||||||| | ||||| | ||| |||| || | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
16193905 |
aattgaacaagaatcaaatctcaaattaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt |
16193806 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | |||||||||||||| |||| |||||||||||||||| |
|
|
| T |
16193805 |
aatttccccaacaatcatacaattatcatcaattcatgcatac |
16193763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 16405268 - 16405022
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| |||||||||||||||| ||||||| ||||||||||| ||||||| || |||||||| | |||||||||||||| |||||| |||| || ||| |
|
|
| T |
16405268 |
tttcatcaaaacaccaacaacatctcaaattatcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaa |
16405169 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||||| |||||| | ||||| | | ||||||| | ||| |||||||||||| ||||| ||||| | | ||||| |
|
|
| T |
16405168 |
taacatcaattgaacaagaatcatatgtcaattta---acaacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg |
16405072 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
16405071 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
16405022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 21844856 - 21844607
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| | |||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
21844856 |
tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca |
21844758 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||| ||||| | ||||| | ||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| ||||||||| |
|
|
| T |
21844757 |
taacatcatttgaacaaaaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt |
21844658 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| ||| | ||||||||||||||| | || |||||||||||||||| |
|
|
| T |
21844657 |
aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatac |
21844607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 21852249 - 21852000
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| | |||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
21852249 |
tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca |
21852151 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| ||||||||| |
|
|
| T |
21852150 |
taacatcatttgaacaagaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt |
21852051 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| | || |||||||||||||||| |
|
|
| T |
21852050 |
aaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatac |
21852000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 327
Target Start/End: Complemental strand, 24929096 - 24928838
Alignment:
| Q |
70 |
aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta |
169 |
Q |
| |
|
||||||| |||||||| ||| ||||||||||||| || || ||| || ||| |||||||||| |||||||| | |||||||||||| |||||||| | |
|
|
| T |
24929096 |
aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaa |
24928998 |
T |
 |
| Q |
170 |
ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattt-gcacaattttcataacttctcatttc |
267 |
Q |
| |
|
||| || | | ||| ||||||| |||||| |||| |||||| |||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |
|
|
| T |
24928997 |
ttaacaaccataacctcaattgaacaagagacataactcaatccaaccacaacttagcgaaattcaccaattgagcacaattttcacaacttatcatttg |
24928898 |
T |
 |
| Q |
268 |
tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
24928897 |
ttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
24928838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5238144 - 5238197
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5238144 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac |
5238197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24661454 - 24661401
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24661454 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac |
24661401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43685603 - 43685656
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43685603 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac |
43685656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 299
Target Start/End: Complemental strand, 222975 - 222754
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
222975 |
tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
222877 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
222876 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat |
222777 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaat |
299 |
Q |
| |
|
|||||| ||| | ||||||||| |
|
|
| T |
222776 |
gaacatgtaatttcaccaacaat |
222754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 299
Target Start/End: Complemental strand, 736598 - 736377
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
736598 |
tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
736500 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
736499 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat |
736400 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaat |
299 |
Q |
| |
|
|||||| ||| | ||||||||| |
|
|
| T |
736399 |
gaacatgtaatttcaccaacaat |
736377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 299
Target Start/End: Complemental strand, 860493 - 860272
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
860493 |
tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
860395 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
860394 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat |
860295 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaat |
299 |
Q |
| |
|
|||||| ||| | ||||||||| |
|
|
| T |
860294 |
gaacatgtaatttcaccaacaat |
860272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 30120690 - 30120939
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| | |||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
30120690 |
tttcaccaaaacaccaaca-caattcaaattatcatcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca |
30120788 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||||||| ||| |||||| | ||||| | ||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
30120789 |
taacatcaattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat |
30120888 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| || || ||||||||||||| |
|
|
| T |
30120889 |
gaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatac |
30120939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 23837154 - 23837308
Alignment:
| Q |
70 |
aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
||||||| |||||||| ||| ||||| |||||| ||| || |||||| ||| ||||||| ||| |||||||| | |||| |||||||| |||||||| |
|
|
| T |
23837154 |
aattcaccaatttcacaaaaccaccaccaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatca |
23837252 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||||| ||||||||||||||| ||| || || || | ||||||||| ||||||| |
|
|
| T |
23837253 |
cttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat |
23837308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 13662561 - 13662481
Alignment:
| Q |
72 |
ttcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattca |
153 |
Q |
| |
|
||||| |||||||| ||| |||||||||||||| | || ||||||||||||||| | |||||||||||||| |||||||| |
|
|
| T |
13662561 |
ttcaccaatttcacaaaaccaccaacaacaatttag-ttctcatcatcaatccataattatgtatacccaaatcatgattca |
13662481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 16674672 - 16674624
Alignment:
| Q |
84 |
accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg |
133 |
Q |
| |
|
||||||||||||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
16674672 |
accaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatg |
16674624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 41246613 - 41246650
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattca |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
41246613 |
caattcacaaatttcaccaaaacaccaacaacatttca |
41246650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 16674512 - 16674428
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcata |
326 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || || |||||||||||| |
|
|
| T |
16674512 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcata |
16674428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 24)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 26680089 - 26680416
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||| |
|
|
| T |
26680089 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcgattcccaaatttcaccaaaacaccaacaac |
26680188 |
T |
 |
| Q |
101 |
aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26680189 |
aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
26680288 |
T |
 |
| Q |
201 |
catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||| |
|
|
| T |
26680289 |
catagctcaattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat |
26680388 |
T |
 |
| Q |
300 |
catacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
26680389 |
catacaattattatcaattcatgcatac |
26680416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 84 - 327
Target Start/End: Complemental strand, 15675381 - 15675136
Alignment:
| Q |
84 |
accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||| |
|
|
| T |
15675381 |
accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataac |
15675282 |
T |
 |
| Q |
184 |
atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca |
281 |
Q |
| |
|
|||||||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || |||| |
|
|
| T |
15675281 |
atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca |
15675182 |
T |
 |
| Q |
282 |
tggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
15675181 |
tgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
15675136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 31115603 - 31115845
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| |||||| |
|
|
| T |
31115603 |
aaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatc |
31115702 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| ||| |||||||| |||||| ||||| |||||| | |||||| |
|
|
| T |
31115703 |
aattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgt |
31115802 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
31115803 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
31115845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 327
Target Start/End: Original strand, 13246386 - 13246646
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |
|
|
| T |
13246386 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca |
13246485 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt |
266 |
Q |
| |
|
|||| || | | ||||||||||| |||||||||||| |||||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |
|
|
| T |
13246486 |
attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt |
13246585 |
T |
 |
| Q |
267 |
ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | ||||||||||||||| |||| || ||||||||||||| |
|
|
| T |
13246586 |
gttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatac |
13246646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 327
Target Start/End: Complemental strand, 54118551 - 54118291
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |
|
|
| T |
54118551 |
caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca |
54118452 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt |
266 |
Q |
| |
|
|||| || | | ||||||||||| |||||||||||| || ||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| ||| || |
|
|
| T |
54118451 |
attaacaactataacatcaattgaacaagaatcataactaaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaatt |
54118352 |
T |
 |
| Q |
267 |
ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
54118351 |
gttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
54118291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 10488659 - 10488778
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
10488659 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
10488758 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10488759 |
tattatcaattcatgcatac |
10488778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 16328092 - 16327973
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
16328092 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
16327993 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
16327992 |
tattatcaattcatgcatac |
16327973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 327
Target Start/End: Complemental strand, 10104523 - 10104297
Alignment:
| Q |
84 |
accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||| |
|
|
| T |
10104523 |
accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaa-------------------caacaac |
10104443 |
T |
 |
| Q |
184 |
atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca |
281 |
Q |
| |
|
|||||||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || |||| |
|
|
| T |
10104442 |
atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca |
10104343 |
T |
 |
| Q |
282 |
tggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
10104342 |
tgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
10104297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 10644187 - 10644436
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
10644187 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca |
10644285 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||||||| ||| |||||| | ||||| ||||| ||||| | | ||||||| | |||| ||||||| ||||||||| ||||| ||||||||| |
|
|
| T |
10644286 |
taacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatattt |
10644385 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | || |||||||||||| |||| |||||||||||||||| |
|
|
| T |
10644386 |
gaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatac |
10644436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 111362 - 111493
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| |||||||||||||||| ||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | |
|
|
| T |
111362 |
tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca |
111461 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaat |
211 |
Q |
| |
|
||||||||||| |||||||||||| |||||| |
|
|
| T |
111462 |
taacatcaattgaacaagaatcataactcaat |
111493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 122020 - 122105
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
122020 |
gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
122105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 47357622 - 47357871
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| || ||||||| ||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
47357622 |
tttcaccaaaacaccaaca-cagctcaaattctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattca |
47357720 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
47357721 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat |
47357820 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||| ||||||||| |
|
|
| T |
47357821 |
gaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatac |
47357871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 10488627 - 10488672
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10488627 |
caatcataacatataatcataccctccatcataattcaacaacaac |
10488672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 13048353 - 13048268
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||| |
|
|
| T |
13048353 |
gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatac |
13048268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 16328124 - 16328079
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16328124 |
caatcataacatataatcataccctccatcataattcaacaacaac |
16328079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 7849970 - 7850044
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaac |
158 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
7849970 |
caccaaaacaccaaca-caattcaaattttcatcaccaattcatgattatgtatactcaagtcatgattcatcaac |
7850044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 41166177 - 41166083
Alignment:
| Q |
130 |
tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||| |||||||| | ||||||||||||| |||||||| |||||| ||||||||||||||| ||| || || | | ||||||||| ||||||| |
|
|
| T |
41166177 |
tatgaatacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat |
41166083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 15044794 - 15044938
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatca |
178 |
Q |
| |
|
|||||||||| || ||||||||||| | || |||||||||| ||||| | ||| | |||||| | |||| |||||| | |||||||| |||||| || |
|
|
| T |
15044794 |
tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca |
15044892 |
T |
 |
| Q |
179 |
acaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
||||||||||||| ||| ||||| || | ||||||||| ||||||| |
|
|
| T |
15044893 |
acaacatcaattgaacatgaatcttatcacaattcaacaacaacat |
15044938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 44055870 - 44055902
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
44055870 |
caattcacaaatttcaccaaaacaccaacaaca |
44055902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 8374504 - 8374619
Alignment:
| Q |
109 |
ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc |
208 |
Q |
| |
|
||||||||||||||| || | ||||||||||||| | || ||||| | || |||||||| ||| | ||||||||||||| | ||| |||||| | ||| |
|
|
| T |
8374504 |
ttttcatcatcaatcgataattatgtatacccaagccataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc |
8374603 |
T |
 |
| Q |
209 |
aattcaactacaacat |
224 |
Q |
| |
|
| |||||| ||||||| |
|
|
| T |
8374604 |
atttcaacaacaacat |
8374619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 15109630 - 15109486
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatca |
178 |
Q |
| |
|
|||||||||| || ||||||||||| | || |||||||||| ||||| | ||| | |||||| | |||| |||||| | ||||||| |||||| || |
|
|
| T |
15109630 |
tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaaca |
15109532 |
T |
 |
| Q |
179 |
acaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
||||||||||||| ||| ||||| || | ||||||||| ||||||| |
|
|
| T |
15109531 |
acaacatcaattgaacatgaatcttatcacaattcaacaacaacat |
15109486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 17145917 - 17145796
Alignment:
| Q |
109 |
ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc |
208 |
Q |
| |
|
|||||||||||||||| | | ||||||||||||| || ||||| | || |||||||| ||| | ||||||||||||| | ||| |||||| | ||| |
|
|
| T |
17145917 |
ttttcatcatcaatccgtaattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc |
17145818 |
T |
 |
| Q |
209 |
aattcaactacaacatgtcaaa |
230 |
Q |
| |
|
| |||||| ||||||| ||||| |
|
|
| T |
17145817 |
atttcaacaacaacatatcaaa |
17145796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 13809711 - 13809647
Alignment:
| Q |
160 |
acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||| || ||||| || | ||||||||| ||||||| |
|
|
| T |
13809711 |
acaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat |
13809647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 52265757 - 52265645
Alignment:
| Q |
113 |
catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat |
211 |
Q |
| |
|
||||||||| ||||||| ||| | |||||| | |||| |||||||| ||| ||| |||||| ||||||||||||||| ||| ||||| || | |||| |
|
|
| T |
52265757 |
catcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat |
52265658 |
T |
 |
| Q |
212 |
tcaactacaacat |
224 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
52265657 |
tcaacaacaacat |
52265645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 7292905 - 7293232
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac |
100 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
7292905 |
atcaaccacaatcacaacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac |
7293004 |
T |
 |
| Q |
101 |
aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7293005 |
aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
7293104 |
T |
 |
| Q |
201 |
catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat |
299 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||| |
|
|
| T |
7293105 |
catagctcaattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat |
7293204 |
T |
 |
| Q |
300 |
catacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||||||| ||||||||||||| |
|
|
| T |
7293205 |
catacaattattattaattcatgcatac |
7293232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 11581035 - 11580786
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || | | |
|
|
| T |
11581035 |
tttcaccaaaacaccaacaacaattcaaattctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagcca |
11580936 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| | | ||||| |
|
|
| T |
11580935 |
taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg |
11580836 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
11580835 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
11580786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 68 - 327
Target Start/End: Complemental strand, 13037322 - 13037061
Alignment:
| Q |
68 |
tcaattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |
|
|
| T |
13037322 |
tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc |
13037223 |
T |
 |
| Q |
168 |
tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatt |
265 |
Q |
| |
|
|||| || | ||||| ||||| |||||||||||| |||||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| ||||| |
|
|
| T |
13037222 |
aattaatattcataacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt |
13037123 |
T |
 |
| Q |
266 |
tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | | ||||| |||||| ||| | | ||||||||||||| |||| |||||||||||||||| |
|
|
| T |
13037122 |
tgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatac |
13037061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 47481320 - 47481078
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| |||| | | | |||||| |
|
|
| T |
47481320 |
aaaacaccaacaacaattcaaattatcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatc |
47481221 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg |
283 |
Q |
| |
|
||||| |||||||||||| ||||||||||| ||||| | | ||||||| ||| ||| ||||||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
47481220 |
aattgaacaagaatcataactcaattcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatg |
47481122 |
T |
 |
| Q |
284 |
gaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | || |||||||||||| |||| |||||||||||||||| |
|
|
| T |
47481121 |
taatttcactaacaatcatacaattatcatcaattcatgcatac |
47481078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 36052634 - 36052880
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | |
|
|
| T |
36052634 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca |
36052733 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
|||||||||||| |||||||||| | ||||| | | ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
36052734 |
caacatcaattgaacaagaatcaaatctcaaatta---acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
36052830 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||| | |||| |||||||||||||||| |
|
|
| T |
36052831 |
aacatgtaattttaccaacaatcatataattatcatcaattcatgcatac |
36052880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 327
Target Start/End: Complemental strand, 16479244 - 16478997
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca |
181 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||| | || || ||| | |
|
|
| T |
16479244 |
caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata |
16479145 |
T |
 |
| Q |
182 |
acatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa |
279 |
Q |
| |
|
|||||||||| ||||||||| | ||||| | || | ||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| || |
|
|
| T |
16479144 |
acatcaattgagcaagaatcaaatctcaaattaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa |
16479045 |
T |
 |
| Q |
280 |
catggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
16479044 |
catgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
16478997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 18254130 - 18253882
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| || | || ||||||||| |||||||| |||| |||| | |
|
|
| T |
18254130 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca |
18254032 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |||| |||| |
|
|
| T |
18254031 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg |
18253932 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
18253931 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
18253882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 11516324 - 11516443
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
11516324 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
11516423 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
11516424 |
tattatcaattcatgcatac |
11516443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 15441730 - 15441611
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
15441730 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
15441631 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
15441630 |
tattatcaattcatgcatac |
15441611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 30262295 - 30262176
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
30262295 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
30262196 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
30262195 |
tattatcaattcatgcatac |
30262176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 16211733 - 16211982
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||| ||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | |
|
|
| T |
16211733 |
tttcaccaaaacaccaacaacaattcaaattctcttcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaacca |
16211832 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
|||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
16211833 |
taacatcaatttaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
16211932 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | || ||||||| |||| |||| |||||||||||||||| |
|
|
| T |
16211933 |
aacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatac |
16211982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 13320988 - 13321232
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| ||||||| || | |||||| ||||||||||||| |||||||| |||| || ||| |||||| |
|
|
| T |
13320988 |
aaaacaccaacaacaatccaaattctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatc |
13321087 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaacta-caacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaaca |
281 |
Q |
| |
|
||||| ||| |||||||| ||||||||||| | |||| | | ||||||| | ||| |||||| ||||||||||| ||||| |||||| || ||||| |
|
|
| T |
13321088 |
aattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattcaccaattgagcacaa-tttcataacttgacatttatacatactttgaaaca |
13321186 |
T |
 |
| Q |
282 |
tggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
13321187 |
tgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
13321232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 3059933 - 3060182
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| ||||||||| |||||| ||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | |
|
|
| T |
3059933 |
tttcatcaaaacacccacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca |
3060032 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattt--gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||| ||||| | | ||||||| |||||| ||| |||||||| || || |||||| ||||||||| |
|
|
| T |
3060033 |
taacatcaattgaacaagaatcataactcaatctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatattt |
3060131 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||| | |||| |||| ||||||| |||||||| |
|
|
| T |
3060132 |
gaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatac |
3060182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 13572644 - 13572893
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| || | || ||| | || ||| | |
|
|
| T |
13572644 |
tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca |
13572742 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||||| |||| | ||||| | ||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| ||||||||| |
|
|
| T |
13572743 |
taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt |
13572842 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| ||| | ||||||||||| ||| | || |||||||||||||||| |
|
|
| T |
13572843 |
aaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatac |
13572893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 2437425 - 2437674
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || ||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
2437425 |
tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattca |
2437523 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatt |
275 |
Q |
| |
|
||||||| ||| |||||||||| | |||| | ||| ||||| | | ||||||| ||| ||| |||||| |||||||||| |||||| | ||||| |
|
|
| T |
2437524 |
taacatcatttgaacaagaatcaaatctcatattaacaacaacttaggaaaaattca-ccaattgaacacaatcttcataacttatcatttttgcatata |
2437622 |
T |
 |
| Q |
276 |
taaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| |||||| ||| | ||||||||||||||| || |||||||||||||||| |
|
|
| T |
2437623 |
tgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatac |
2437674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15441770 - 15441717
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15441770 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac |
15441717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30262335 - 30262282
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30262335 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac |
30262282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 10989378 - 10989626
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
10989378 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca |
10989476 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | || ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
10989477 |
taacatcatttgaacaagaatcacaactcaaat-tacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat |
10989575 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| || |||||||||||||||| |
|
|
| T |
10989576 |
gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatac |
10989626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11516284 - 11516337
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
11516284 |
atcaaccacaatcataacatatactcatacactccatcataattcaacaacaac |
11516337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 327
Target Start/End: Complemental strand, 13911292 - 13911059
Alignment:
| Q |
98 |
aacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaag |
197 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| | |||||| || ||||||||| | || ||| | || ||| | ||||||||||| ||| | |
|
|
| T |
13911292 |
aacaattcaaattctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatg |
13911193 |
T |
 |
| Q |
198 |
aatcatagctcaattcaactacaacat---gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaacc |
293 |
Q |
| |
|
||||| | ||||| ||||| ||||| | | ||||||| | ||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | ||| |
|
|
| T |
13911192 |
aatcacatctcaaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcacc |
13911093 |
T |
 |
| Q |
294 |
aacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||| |
|
|
| T |
13911092 |
aacaatcatacaattaacatcaattcatgcatac |
13911059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 215
Target Start/End: Complemental strand, 296257 - 296128
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa |
182 |
Q |
| |
|
|||||||||||||||| ||||||| |||||| |||||||||||||||| | |||||||| | | |||||||| |||||||| |||| | |||||| |
|
|
| T |
296257 |
caccaaaacaccaacacaaattcaatttttcaacatcaatccatgaataagcatacccaatcagtaattcatca---acaacatcaattaatagcaacaa |
296161 |
T |
 |
| Q |
183 |
catcaattgcacaagaatcatagctcaattcaa |
215 |
Q |
| |
|
||||||||| ||| |||||| | | |||||||| |
|
|
| T |
296160 |
catcaattgaacatgaatcacaacacaattcaa |
296128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 25292470 - 25292385
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| ||||| |
|
|
| T |
25292470 |
gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatac |
25292385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 15822723 - 15822691
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
15822723 |
caattcacaaatttcaccaaaacaccaacaaca |
15822691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 296094 - 296016
Alignment:
| Q |
246 |
aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca |
324 |
Q |
| |
|
|||||| |||||||||||||| |||||| || |||||| ||| | ||||||||||||| |||| ||| ||||||||| |
|
|
| T |
296094 |
aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgca |
296016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 25292633 - 25292572
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa |
142 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||| | ||||||||||||||| | |||||| |
|
|
| T |
25292633 |
tttcaccaaaacaccaaca-caactcaaattctcattaacaatccatgaatatgcaaacccaa |
25292572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 17224230 - 17224075
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
|||||||| ||||| || ||| |||||||||||| ||| || |||||| ||| ||||||| ||| |||||||| | |||| |||||| |||||||| |
|
|
| T |
17224230 |
caattcaccaattttacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatc |
17224132 |
T |
 |
| Q |
168 |
tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||||| ||||||||||||||| ||| || || || ||||||||| ||||||| |
|
|
| T |
17224131 |
acttagcaacaacaacatcaattgaacatgactcttacaacaattcaacaacaacat |
17224075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 16744489 - 16744162
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16744489 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaac |
16744390 |
T |
 |
| Q |
101 |
aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16744389 |
aattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaat |
16744290 |
T |
 |
| Q |
201 |
catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat |
299 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||| ||| ||||||||||| |
|
|
| T |
16744289 |
catagctcaattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaat |
16744190 |
T |
 |
| Q |
300 |
catacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||||||||||||||||||| |||| |
|
|
| T |
16744189 |
catacacttattatcaattcatggatac |
16744162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 86 - 327
Target Start/End: Complemental strand, 17912771 - 17912529
Alignment:
| Q |
86 |
caaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacat |
185 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| | |||||||||||| |||||||| |||| || ||| ||||| |
|
|
| T |
17912771 |
caaaacacccacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacat |
17912672 |
T |
 |
| Q |
186 |
caattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
| |||| ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
17912671 |
cgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgt |
17912572 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
17912571 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
17912529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 69 - 327
Target Start/End: Complemental strand, 15859331 - 15859071
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
|||||||| | ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |
|
|
| T |
15859331 |
caattcaccattttcaccaaaacaacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca |
15859232 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt |
266 |
Q |
| |
|
|||| || | | ||||||||||| |||||||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |
|
|
| T |
15859231 |
attaacagccataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt |
15859132 |
T |
 |
| Q |
267 |
ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| ||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
15859131 |
gttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
15859071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 14842856 - 14842608
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || ||||||||| | |||||| |||| |||| | |
|
|
| T |
14842856 |
tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatcca |
14842758 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||||||||| |||||| |||| |||| |
|
|
| T |
14842757 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttg |
14842658 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
14842657 |
aacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatac |
14842608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 15936922 - 15936674
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| || | || ||||||||| |||||||| |||| |||| | |
|
|
| T |
15936922 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca |
15936824 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | ||| |||||||||||| ||||| |||||| |||| |||| |
|
|
| T |
15936823 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg |
15936724 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
15936723 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
15936674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 2049777 - 2050026
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | |
|
|
| T |
2049777 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca |
2049876 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
| ||||||||| |||| ||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| || || |||| | ||||||||| |
|
|
| T |
2049877 |
tagcatcaattgaacaaaaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttg |
2049976 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| ||||||||| |||||| |
|
|
| T |
2049977 |
aacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatac |
2050026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 322
Target Start/End: Complemental strand, 15938764 - 15938521
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| || | || ||||||||| |||||||| |||| |||| | |
|
|
| T |
15938764 |
tttcaccaaaacaccaaca-caattcaaattttcagcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca |
15938666 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | ||| |||||||||||| ||||| |||||| |||| |||| |
|
|
| T |
15938665 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg |
15938566 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatg |
322 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| ||||||||||| |
|
|
| T |
15938565 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatg |
15938521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 69 - 327
Target Start/End: Complemental strand, 51158325 - 51158065
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacacc-aacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
|||||||||||||| | |||||||| ||||||| ||||||| |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |
|
|
| T |
51158325 |
caattcacaaattt-agcaaaacacttaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc |
51158227 |
T |
 |
| Q |
168 |
tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatt |
265 |
Q |
| |
|
|||| || | | ||||||||||| |||||||||||| |||||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| ||||| |
|
|
| T |
51158226 |
aattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt |
51158127 |
T |
 |
| Q |
266 |
tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
51158126 |
tttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
51158065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 2449404 - 2449285
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
2449404 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
2449305 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
2449304 |
tattatcaattcatgcatac |
2449285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 12030443 - 12030194
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| |||| || | | |
|
|
| T |
12030443 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaacca |
12030344 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
| ||||||||| |||||||||| | |||| | ||| | ||| | | ||||||| | ||| |||||| ||||| ||||| ||| || ||||||||| |
|
|
| T |
12030343 |
tagcatcaattgaacaagaatcaaatatcaaattaacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttg |
12030244 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
12030243 |
aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
12030194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 70 - 327
Target Start/End: Original strand, 13838852 - 13839110
Alignment:
| Q |
70 |
aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta |
169 |
Q |
| |
|
||||||| |||||||| ||| ||||||||||||| || || ||| || ||| |||||||||| |||||||||| ||||||||||||| |||||||| | |
|
|
| T |
13838852 |
aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaaacaatgattcatcaaccacaacatcaa |
13838950 |
T |
 |
| Q |
170 |
ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttc |
267 |
Q |
| |
|
||| || | | ||||||||||| |||||||||||| |||||| |||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |
|
|
| T |
13838951 |
ttaacagccataacatcaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttg |
13839050 |
T |
 |
| Q |
268 |
tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
13839051 |
ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatac |
13839110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 15614808 - 15615050
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||| |
|
|
| T |
15614808 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc |
15614907 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| ||||||||| | | ||| | ||| | ||| | | ||||||| | ||| |||| || |||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
15614908 |
aattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgt |
15615007 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
15615008 |
aatttcaccaacaatcctacaattatcatcaattcatgcatac |
15615050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 15468686 - 15468555
Alignment:
| Q |
24 |
atcatacactccatcataattcaacaacaacttatcatatttcttcaatt-cacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaat |
122 |
Q |
| |
|
|||||||| |||||||| |||||||||||| | ||||| ||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
15468686 |
atcatacattccatcatgtttcaacaacaacatgtcataattcaccaatttcacaaatttcaccaaaacaacaacaacaattcaaattctcatcatcaat |
15468587 |
T |
 |
| Q |
123 |
ccatgaatatgtatacccaaacgatgattcat |
154 |
Q |
| |
|
|||||||||| |||||||| | ||||||||| |
|
|
| T |
15468586 |
tcatgaatatgcatacccaagcaatgattcat |
15468555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 22275119 - 22275250
Alignment:
| Q |
24 |
atcatacactccatcataattcaacaacaacttatcatatttcttcaatt-cacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaat |
122 |
Q |
| |
|
||||| || |||||||| |||||||||||| | ||||| ||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22275119 |
atcatgcattccatcatgtttcaacaacaacatgtcataattcactaatttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaat |
22275218 |
T |
 |
| Q |
123 |
ccatgaatatgtatacccaaacgatgattcat |
154 |
Q |
| |
|
|||||||||| ||||| || | ||||||||| |
|
|
| T |
22275219 |
tcatgaatatgcatacctaagcaatgattcat |
22275250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 47984624 - 47984759
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||| |||||||||| |||||||| ||||||||||||| |||||||| |||| || ||| |||||| |
|
|
| T |
47984624 |
aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc |
47984723 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaac |
222 |
Q |
| |
|
||||| ||| |||||| | |||||| |||| ||||| |
|
|
| T |
47984724 |
aattgaacatgaatcacatctcaatccaacaacaac |
47984759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 48003198 - 48003333
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||| |||||||||| |||||||| ||||||||||||| |||||||| |||| || ||| |||||| |
|
|
| T |
48003198 |
aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc |
48003297 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaac |
222 |
Q |
| |
|
||||| ||| |||||| | |||||| |||| ||||| |
|
|
| T |
48003298 |
aattgaacatgaatcacatctcaatccaacaacaac |
48003333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 47993911 - 47994046
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||| |||||||||| |||||||| ||||||||||||| |||| ||| |||| || ||| |||||| |
|
|
| T |
47993911 |
aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc |
47994010 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaac |
222 |
Q |
| |
|
||||| ||| |||||| | |||||| |||| ||||| |
|
|
| T |
47994011 |
aattgaacatgaatcacatctcaatccaacaacaac |
47994046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 48012484 - 48012619
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||| |||||||||| |||||||| ||||||||||||| |||| ||| |||| || ||| |||||| |
|
|
| T |
48012484 |
aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc |
48012583 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaac |
222 |
Q |
| |
|
||||| ||| |||||| | |||||| |||| ||||| |
|
|
| T |
48012584 |
aattgaacatgaatcacatctcaatccaacaacaac |
48012619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 16821099 - 16821356
Alignment:
| Q |
72 |
ttcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctatt |
171 |
Q |
| |
|
||||| |||||||| ||| |||||||||| ||| | || ||||||| |||||||||||||| | |||||| | || ||||||||| | || ||| | | |
|
|
| T |
16821099 |
ttcaccaatttcacaaaaccaccaacaaccatttat-ttatcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaat |
16821197 |
T |
 |
| Q |
172 |
agcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttct |
268 |
Q |
| |
|
| ||| | ||||||||||| ||| |||||| | ||||| ||||| ||||| | | ||||||| | |||| ||||||| ||||| ||| ||||| | |
|
|
| T |
16821198 |
aacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacattttt |
16821297 |
T |
 |
| Q |
269 |
acatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||| |||||| ||| | ||||||||||||||| |||| ||||||| |||||||| |
|
|
| T |
16821298 |
acatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatac |
16821356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 2449436 - 2449391
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2449436 |
caatcataacatataatcataccctccatcataattcaacaacaac |
2449391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 19231945 - 19231997
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatat |
132 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |
|
|
| T |
19231945 |
tttcaccaaaacaccaacaacaatccaaattatcatcatcaattcatgaatat |
19231997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 55316187 - 55316436
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| | |||||| | || |||||| || | | ||| | || ||| | |
|
|
| T |
55316187 |
tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca |
55316285 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||||| |||| | ||||| | ||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
55316286 |
taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat |
55316385 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| || |||||||||||||||| |
|
|
| T |
55316386 |
gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatac |
55316436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 41270043 - 41270104
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa |
142 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| | |||||| |
|
|
| T |
41270043 |
tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaa |
41270104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 13975853 - 13975768
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| |||||||||| |||||| ||| |||||||||||| ||| ||||||||||||||| | || | |||||||||||||| |
|
|
| T |
13975853 |
gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac |
13975768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 45860937 - 45861022
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| |||||||||| |||||| ||| |||||||||||| ||| ||||||||||||||| | || | |||||||||||||| |
|
|
| T |
45860937 |
gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac |
45861022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 13955185 - 13954936
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| || | | ||| | || ||| | |
|
|
| T |
13955185 |
tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca |
13955087 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||||| |||| | ||||| | || ||||| | | ||||||||| ||| ||||||| ||||||||| |||||| ||| ||||| |
|
|
| T |
13955086 |
taacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcatcaattgagcacaatattcataactgatcatttttacttattt |
13954987 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| ||| ||||||||||||||| | || | |||||||||||||| |
|
|
| T |
13954986 |
aaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac |
13954936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 13976017 - 13975944
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcat |
154 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| |
|
|
| T |
13976017 |
tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcat |
13975944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 45860773 - 45860834
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa |
142 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| |
|
|
| T |
45860773 |
tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaa |
45860834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 22144564 - 22144532
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
22144564 |
caattcacaaatttcaccaaaacaccaacaaca |
22144532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 12265050 - 12264932
Alignment:
| Q |
112 |
tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat |
211 |
Q |
| |
|
||||||||||||||| | ||||||||||||| || ||||| | || |||||||| ||| | ||||||||||||| | ||| |||||| | |||| | |
|
|
| T |
12265050 |
tcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatt |
12264951 |
T |
 |
| Q |
212 |
tcaactacaacatgtcaaa |
230 |
Q |
| |
|
||||| ||||||| ||||| |
|
|
| T |
12264950 |
tcaacaacaacatatcaaa |
12264932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 41270207 - 41270292
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| ||||||||||||||| || |||||||||||||||| |
|
|
| T |
41270207 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatac |
41270292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 37440 - 37113
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcttcaattcacaaatttcaccaaaacaccaacaac |
100 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
37440 |
atcaaccacaatcacaacatataatcatacactccatcataattcaacaaaaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac |
37341 |
T |
 |
| Q |
101 |
aattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37340 |
aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat |
37241 |
T |
 |
| Q |
201 |
catagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat |
299 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||| |
|
|
| T |
37240 |
catagctcaatccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat |
37141 |
T |
 |
| Q |
300 |
catacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
37140 |
catacaattattatcaattcatgcatac |
37113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0195 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0195
Description:
Target: scaffold0195; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 19173 - 19422
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| |
|
|
| T |
19173 |
tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa |
19272 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
19273 |
taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
19372 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
19373 |
aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
19422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0195; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 21257 - 21506
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| |
|
|
| T |
21257 |
tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa |
21356 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
21357 |
taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
21456 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
21457 |
aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
21506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 29)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 88 - 327
Target Start/End: Complemental strand, 18531355 - 18531114
Alignment:
| Q |
88 |
aaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatca |
187 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||| |||||||| |||| || ||| ||||||| |
|
|
| T |
18531355 |
aaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatca |
18531256 |
T |
 |
| Q |
188 |
attgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
|||| ||| |||||||| ||||||||||| ||||| | | ||||||| ||| ||| ||||||||||| |||||| ||||| |||||| || |||||| |
|
|
| T |
18531255 |
attgaacatgaatcatatctcaattcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgt |
18531157 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
18531156 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
18531114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 84 - 327
Target Start/End: Complemental strand, 22054125 - 22053880
Alignment:
| Q |
84 |
accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||| |||||||| |||| || ||| ||| |
|
|
| T |
22054125 |
accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataac |
22054026 |
T |
 |
| Q |
184 |
atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca |
281 |
Q |
| |
|
|||||||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || |||| |
|
|
| T |
22054025 |
atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca |
22053926 |
T |
 |
| Q |
282 |
tggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|| ||| | ||||||||||||||| ||| |||||||||| ||||| |
|
|
| T |
22053925 |
tgtaatttcaccaacaatcatacaactatcatcaattcatacatac |
22053880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 23506932 - 23507181
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | |
|
|
| T |
23506932 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca |
23507031 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
23507032 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
23507131 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
23507132 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
23507181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 327
Target Start/End: Complemental strand, 27182854 - 27182594
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||| | ||||||||||||| |||||||| |
|
|
| T |
27182854 |
caattcaaaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatca |
27182755 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt |
266 |
Q |
| |
|
|||| || | | ||||||||||| |||||||||||| |||||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |
|
|
| T |
27182754 |
attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt |
27182655 |
T |
 |
| Q |
267 |
ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | | ||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
27182654 |
gttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatac |
27182594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 327
Target Start/End: Original strand, 34939248 - 34939493
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| | |||||||||||| |||||||| |||| || ||| || |
|
|
| T |
34939248 |
caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataa |
34939347 |
T |
 |
| Q |
183 |
catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac |
280 |
Q |
| |
|
|||||| || |||||||||||| |||||||| || | || | | |||| |||| ||| ||||||||||||||||||| ||||| |||||| || ||| |
|
|
| T |
34939348 |
catcaactgaacaagaatcataactcaattc-acaatgacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac |
34939446 |
T |
 |
| Q |
281 |
atggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| || | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
34939447 |
atgtgatttcaccaacaatcatacaattatcatcaattcatgcatac |
34939493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 20623066 - 20623185
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
20623066 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
20623165 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
20623166 |
tattatcaattcatgcatac |
20623185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 21233694 - 21233575
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
21233694 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
21233595 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
21233594 |
tattatcaattcatgcatac |
21233575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 212 - 327
Target Start/End: Original strand, 37052844 - 37052960
Alignment:
| Q |
212 |
tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
310 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| |||| |
|
|
| T |
37052844 |
tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat |
37052943 |
T |
 |
| Q |
311 |
tatcaattcatgcatac |
327 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
37052944 |
tatcaattcatgcatac |
37052960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 16536294 - 16536413
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
16536294 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
16536393 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
16536394 |
tattataaattcatgcatac |
16536413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 25900571 - 25900453
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||| ||||||| |||||| ||| ||||||||||||||||| | |
|
|
| T |
25900571 |
aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat |
25900473 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
25900472 |
tatcatcaattcatgcatac |
25900453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 17471887 - 17471803
Alignment:
| Q |
70 |
aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcat |
154 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| | ||||||||| |
|
|
| T |
17471887 |
aattcaccaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcgtacccaagcaatgattcat |
17471803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 18778276 - 18778027
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || || | |
|
|
| T |
18778276 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattca |
18778178 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
18778177 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat |
18778078 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
18778077 |
gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatac |
18778027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 22366765 - 22366516
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
22366765 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
22366667 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||||| |||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
22366666 |
taacatcatttgaacaagcatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat |
22366567 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
22366566 |
gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatac |
22366516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 25426596 - 25426845
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
25426596 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
25426694 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | | || ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
25426695 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat |
25426794 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
25426795 |
gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatac |
25426845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 12342 - 12591
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
12342 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
12440 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | | || ||||||| |||||||||| ||| || | ||||| | |
|
|
| T |
12441 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatat |
12540 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
12541 |
gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatac |
12591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20623026 - 20623079
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20623026 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac |
20623079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 21073879 - 21073803
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa |
157 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || ||||||||| |
|
|
| T |
21073879 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaa |
21073803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21233734 - 21233681
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21233734 |
atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac |
21233681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 29190552 - 29190479
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaacta |
160 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
29190552 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaacta |
29190479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 327
Target Start/End: Complemental strand, 4200251 - 4200020
Alignment:
| Q |
99 |
acaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaaga |
198 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||| | |||||| | || ||||||||| | || ||| | || ||| | ||||||||||| ||| || |
|
|
| T |
4200251 |
acaattcaaattctcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatga |
4200152 |
T |
 |
| Q |
199 |
atcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaa |
295 |
Q |
| |
|
|||| | ||||| ||||| ||||||| | ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | ||||| |
|
|
| T |
4200151 |
atcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaa |
4200052 |
T |
 |
| Q |
296 |
caatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||| || |||||||||||||||| |
|
|
| T |
4200051 |
caatcatacaactaacatcaattcatgcatac |
4200020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 19499867 - 19500116
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| || | || ||| ||||| | || ||| | || ||| | |
|
|
| T |
19499867 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattca |
19499965 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | | || ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
19499966 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat |
19500065 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
19500066 |
gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatac |
19500116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 27009809 - 27010058
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| || | || ||| | || ||| | |
|
|
| T |
27009809 |
tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca |
27009907 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||||| |||| | ||||| | ||| ||||| | | ||||||| | ||| | ||||| |||||||||| |||||| ||||||||| |
|
|
| T |
27009908 |
taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagtacaatattcataacttatcatttttacatattt |
27010007 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| ||| | ||||||| ||||||| | || |||||||||||||||| |
|
|
| T |
27010008 |
aaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatac |
27010058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 43443679 - 43443430
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||||||||||| | |||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
43443679 |
tttcaccaaaacaccaaca-caattcaaatcctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca |
43443581 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||| ||| | ||||| ||||| ||||| | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
43443580 |
taacatcatttgaacaagactcacatctcaaatcaacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat |
43443481 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| || |||||||||||||||| |
|
|
| T |
43443480 |
gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatac |
43443430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 29188404 - 29188319
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
29188404 |
gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
29188319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 25900603 - 25900558
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25900603 |
caatcataacatataatcataccctccatcataattcaacaacaac |
25900558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37052801 - 37052854
Alignment:
| Q |
1 |
atcaaccccaatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
37052801 |
atcaaccacaatcataacatataatcataccctccatcataactcaacaacaac |
37052854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 16536262 - 16536307
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
16536262 |
caatcataacatacaatcataccctccatcataattcaacaacaac |
16536307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 23493916 - 23494029
Alignment:
| Q |
112 |
tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa |
210 |
Q |
| |
|
|||||||||| ||||||| ||| | |||||| | |||| |||||| | |||||||| |||||| ||||||||||||||| ||| ||||| || | ||| |
|
|
| T |
23493916 |
tcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa |
23494015 |
T |
 |
| Q |
211 |
ttcaactacaacat |
224 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
23494016 |
ttcaacaacaacat |
23494029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
| Q |
160 |
acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||||||| |||||| ||||||||||||||| ||| ||||| || | ||||||||| ||||||| |
|
|
| T |
7728466 |
acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat |
7728530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 84 - 327
Target Start/End: Original strand, 8820 - 9065
Alignment:
| Q |
84 |
accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac |
183 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| | ||| ||| |
|
|
| T |
8820 |
accaaaacaccaacaaaaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataac |
8919 |
T |
 |
| Q |
184 |
atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca |
281 |
Q |
| |
|
|||||||| ||| ||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || |||| |
|
|
| T |
8920 |
atcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca |
9019 |
T |
 |
| Q |
282 |
tggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
9020 |
tgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
9065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 148688 - 148937
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| | ||||||||||||| ||||| || |||| || | | |
|
|
| T |
148688 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaacca |
148787 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
148788 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
148887 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
148888 |
aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
148937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 106; Significance: 5e-53; HSPs: 25)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 69 - 327
Target Start/End: Complemental strand, 19795011 - 19794751
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaa-caccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| |
|
|
| T |
19795011 |
caattcacaa-tttcaccaaaaacaccaacaaaaattcaaattctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatc |
19794913 |
T |
 |
| Q |
168 |
tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatt |
265 |
Q |
| |
|
|||| | || ||||||||||| |||||||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| ||||| ||||| |
|
|
| T |
19794912 |
aattaacggaaataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt |
19794813 |
T |
 |
| Q |
266 |
tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | | ||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19794812 |
tgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatac |
19794751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 36982737 - 36982488
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||| || ||| |
|
|
| T |
36982737 |
tttcactaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaa |
36982638 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||||| ||||| || | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
36982637 |
taacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
36982538 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||| ||||| |||| |||| ||||||||||| |||| |
|
|
| T |
36982537 |
aacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatac |
36982488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 84 - 327
Target Start/End: Complemental strand, 24341681 - 24341436
Alignment:
| Q |
84 |
accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac |
183 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||| |||| || ||| ||| |
|
|
| T |
24341681 |
accaaaacaccaacaataattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataac |
24341582 |
T |
 |
| Q |
184 |
atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca |
281 |
Q |
| |
|
|||||||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || |||| |
|
|
| T |
24341581 |
atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca |
24341482 |
T |
 |
| Q |
282 |
tggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
24341481 |
tataatttcaccaacaatcatacaattatcatcaattcatgcatac |
24341436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 324
Target Start/End: Complemental strand, 7508138 - 7507894
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca |
181 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||| | || || ||| | |
|
|
| T |
7508138 |
caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata |
7508039 |
T |
 |
| Q |
182 |
acatcaatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||| ||| |||||||| ||||||| ||| ||||| | | |||||||| ||| ||| ||||||||||||||||| | |||| ||||||||| |
|
|
| T |
7508038 |
acatcaattaaaacatgaatcatatctcaatt-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttg |
7507941 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgca |
324 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
7507940 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca |
7507894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 25265679 - 25265437
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||| ||| |||||||| |||| || |||||||||| |
|
|
| T |
25265679 |
aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc |
25265580 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| ||| | || | | |||||||| ||||||| | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || |||||| |
|
|
| T |
25265579 |
aattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgt |
25265480 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
25265479 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
25265437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 8891209 - 8891458
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| | | | |
|
|
| T |
8891209 |
tttcaccaaaacaccaacaaccattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca |
8891308 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| | | ||||| |
|
|
| T |
8891309 |
taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg |
8891408 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||||||| |||| |||||||||||||||| |
|
|
| T |
8891409 |
aacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatac |
8891458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 19689567 - 19689448
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
19689567 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
19689468 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
19689467 |
tattatcaattcatgcatac |
19689448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 23820168 - 23820287
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
23820168 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
23820267 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
23820268 |
tattatcaattcatgcatac |
23820287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 14906606 - 14906487
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
14906606 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
14906507 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
14906506 |
tattatcaattcatgcatac |
14906487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 462706 - 462954
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| |||||||||||||||| |||||||| | ||| ||||| |||||||||| |||||||| | |||||||||||| || ||||| |||| || | | |
|
|
| T |
462706 |
tttcatcaaaacaccaacaaca-ttcaaattcttatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagcca |
462804 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||| ||||| | | ||||||| ||| ||| ||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
462805 |
taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatattt |
462903 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
462904 |
gaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
462954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 20015108 - 20015225
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||| ||| | |
|
|
| T |
20015108 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat |
20015207 |
T |
 |
| Q |
308 |
tattatcaattcatgcat |
325 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
20015208 |
tattatcaattcatgcat |
20015225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 43643250 - 43643004
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| ||||||||||||| | ||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||||||||||| |||| || ||| |
|
|
| T |
43643250 |
tttcatcaaaacaccaacatc---tcaaattatcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaa |
43643154 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
| ||||||||| |||||||||||| ||||| | || ||||| | | ||||||| | ||| |||||||||||| ||||| ||||| | | ||||| |
|
|
| T |
43643153 |
tagcatcaattgaacaagaatcatatctcaaattaataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg |
43643054 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
43643053 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
43643004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 20627609 - 20627360
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| |||||||||||||||| ||||||| ||||| ||||| ||||||||| |||||||| | ||||||||||||| |||||| | |||| || | | |
|
|
| T |
20627609 |
tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaacca |
20627510 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
|| |||||||| |||||||| | | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| || || |||||| ||||||||| |
|
|
| T |
20627509 |
taaaatcaattgaacaagaattaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttg |
20627410 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||| ||| | ||||||||||||||| |||| |||||||| ||||||| |
|
|
| T |
20627409 |
gacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatac |
20627360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 19886945 - 19886696
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
19886945 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
19886847 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | | || ||||||| |||||||||| ||| || | ||||| | |
|
|
| T |
19886846 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatat |
19886747 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
19886746 |
gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatac |
19886696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 19689599 - 19689554
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19689599 |
caatcataacatataatcatacactccatcataattcaacaacaac |
19689554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 14906638 - 14906593
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14906638 |
caatcataacatataatcataccctccatcataattcaacaacaac |
14906593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 17396784 - 17396699
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |
|
|
| T |
17396784 |
gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac |
17396699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 20015076 - 20015121
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
20015076 |
caatcataacatataatcataccctccatcataattcaacaacaac |
20015121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 23820136 - 23820181
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23820136 |
caatcataacatataatcataccctccatcataattcaacaacaac |
23820181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 17396948 - 17396887
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa |
142 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| |
|
|
| T |
17396948 |
tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaa |
17396887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 19669362 - 19669279
Alignment:
| Q |
109 |
ttttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg |
191 |
Q |
| |
|
|||||||||||| | ||||||| ||| |||||||| | |||| |||||||| | |||||| |||||| ||||||||||||||| |
|
|
| T |
19669362 |
ttttcatcatcagttcatgaattatgaatacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg |
19669279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 9636761 - 9636821
Alignment:
| Q |
130 |
tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt |
190 |
Q |
| |
|
|||| |||||||||| |||| |||||||| |||| |||| ||| || |||||||||||||| |
|
|
| T |
9636761 |
tatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt |
9636821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 19666525 - 19666605
Alignment:
| Q |
112 |
tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg |
191 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| ||| |||||| ||||||||||||||| |
|
|
| T |
19666525 |
tcatcatcaaaacatgaattatgaatacccaagccatgaatcatcaacgacaatatcacttagcaacaacaacatcaattg |
19666605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 24884718 - 24884762
Alignment:
| Q |
146 |
atgattcatcaactacaacatctattagcatcaacaacatcaatt |
190 |
Q |
| |
|
|||| |||||||| |||| ||||||||||| |||||||||||||| |
|
|
| T |
24884718 |
atgaatcatcaacaacaatatctattagcaacaacaacatcaatt |
24884762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 32465813 - 32465845
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
32465813 |
caattcataaatttcaccaaaacaccaacaaca |
32465845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 37209 - 36960
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | |
|
|
| T |
37209 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagcca |
37110 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||| ||||||| |||||| ||||| |||||| |||| ||||| | | ||||||| | |||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
37109 |
taacgtcaattgaacaagattcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttg |
37010 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||| | |||| |||| |||||||||||||||| |
|
|
| T |
37009 |
aacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatac |
36960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 69 - 327
Target Start/End: Original strand, 23153403 - 23153663
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
23153403 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatca |
23153502 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt |
266 |
Q |
| |
|
|||| || | | || |||||||| |||||||||||| |||||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |
|
|
| T |
23153503 |
attaacagccataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt |
23153602 |
T |
 |
| Q |
267 |
ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
23153603 |
gttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
23153663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 14626407 - 14626165
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||| |
|
|
| T |
14626407 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc |
14626308 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacatgtca-aattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg |
283 |
Q |
| |
|
||||| ||||||||| | ||||| | ||| ||||| | || |||||| ||| ||| ||||||||||||||||| |||||| ||||||||| |||||| |
|
|
| T |
14626307 |
aattgagcaagaatcaaatctcaagttaacaacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatg |
14626209 |
T |
 |
| Q |
284 |
gaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
14626208 |
taatttcaccaacaatcatacaattatcatcaattcatgcatac |
14626165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 35009735 - 35009486
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || ||| |
|
|
| T |
35009735 |
tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaa |
35009636 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
|||||||||||| ||| | || | | |||||||| ||||||| | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || |
|
|
| T |
35009635 |
caacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattg |
35009536 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
35009535 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
35009486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 83 - 325
Target Start/End: Complemental strand, 1658040 - 1657797
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| | |||||||||||| |||||||| |||| || ||| || |
|
|
| T |
1658040 |
caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa |
1657941 |
T |
 |
| Q |
183 |
catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac |
280 |
Q |
| |
|
|||||| || |||||||||||| |||||||| || | ||| | | |||| |||| ||| ||||||||||||||||||| ||||| |||||| || ||| |
|
|
| T |
1657940 |
catcaactgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac |
1657842 |
T |
 |
| Q |
281 |
atggaatctaaccaacaatcatacacttattatcaattcatgcat |
325 |
Q |
| |
|
||| || | ||||||||||||||| |||| |||||||||||||| |
|
|
| T |
1657841 |
atgtgatttcaccaacaatcatacaattatcatcaattcatgcat |
1657797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 327
Target Start/End: Original strand, 15862443 - 15862687
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| | |||||||||||| |||||||| |||| || ||| || |
|
|
| T |
15862443 |
caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataa |
15862542 |
T |
 |
| Q |
183 |
catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac |
280 |
Q |
| |
|
||| || || |||||||||||| |||||||| || | ||| | | |||| |||| ||| ||||||||||||||||||| ||||| |||||| || ||| |
|
|
| T |
15862543 |
cat-aaatgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaac |
15862640 |
T |
 |
| Q |
281 |
atggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| || | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
15862641 |
atgtgatttcaccaacaatcatacaattatcatcaattcatgcatac |
15862687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 1650382 - 1650140
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||| |||||||| | || || ||| |||||| |
|
|
| T |
1650382 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc |
1650283 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| ||||||||| | ||||| | ||| | ||| | | ||||||| | ||| |||||||||||| ||||| ||||| ||||||||| |||||| |
|
|
| T |
1650282 |
aattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgt |
1650183 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
1650182 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
1650140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 27740808 - 27740941
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa |
182 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| || |||||||| || | |||| | |
|
|
| T |
27740808 |
caccaaaacaccaacaccaattcaaattttcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaacca |
27740907 |
T |
 |
| Q |
183 |
catcaattgcacaagaatcatagctcaattcaac |
216 |
Q |
| |
|
||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
27740908 |
catcaattgaacatgaatcatatctcaattcaac |
27740941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 25175531 - 25175780
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
25175531 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
25175629 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| |||||||||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
25175630 |
taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat |
25175729 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
25175730 |
gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatac |
25175780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 27654267 - 27654018
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||| |||||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
27654267 |
tttcaccaaaacaccgaca-caattcaaattctcatcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca |
27654169 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| | | |||||||||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
27654168 |
taacatcattggaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat |
27654069 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
27654068 |
gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatac |
27654018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 18381975 - 18381821
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||| ||| || |||||| ||| ||||||| ||| |||||||| | |||| |||||||| |||||||| |
|
|
| T |
18381975 |
caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatc |
18381877 |
T |
 |
| Q |
168 |
tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
223 |
Q |
| |
|
|||||| ||||||||||||||| ||| || || || | ||||||||| |||||| |
|
|
| T |
18381876 |
acttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca |
18381821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 16826038 - 16825986
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg |
133 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
16826038 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatg |
16825986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 22362032 - 22361926
Alignment:
| Q |
94 |
caacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgc |
192 |
Q |
| |
|
||||||||| |||| || ||||||||||| ||||||| ||| | |||||| | |||| |||||||| |||| ||| |||||| ||||||||||||||| |
|
|
| T |
22362032 |
caacaacaactcaa-ttctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattga |
22361934 |
T |
 |
| Q |
193 |
acaagaat |
200 |
Q |
| |
|
||| |||| |
|
|
| T |
22361933 |
acatgaat |
22361926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 32898745 - 32898774
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaaca |
98 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
32898745 |
caattcacaaatttcaccaaaacaccaaca |
32898774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 21623123 - 21623278
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
|||||||| ||||| |||||| ||||||||||| ||| |||||||| ||| ||||||| ||| |||||||| | |||| |||| ||| ||||||| |
|
|
| T |
21623123 |
caattcaccaattttaccaaactaccaacaacaactcat-ttttcatccacaaatcatgaattatgaatacccaagccatgactcattaacatcaacatc |
21623221 |
T |
 |
| Q |
168 |
tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||||| ||||||||||||| | ||| || || || | ||||||||| ||||||| |
|
|
| T |
21623222 |
acttagcaacaacaacatcaatagaacatgattcttaccacaattcaacaacaacat |
21623278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
| Q |
160 |
acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||||||| |||||| ||||||||||||||| ||| ||||| || | ||||||||| ||||||| |
|
|
| T |
25367438 |
acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat |
25367374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 33324690 - 33324770
Alignment:
| Q |
112 |
tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg |
191 |
Q |
| |
|
|||||| |||| ||||||| ||| |||||||| | |||| |||||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
33324690 |
tcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattg |
33324770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 35136262 - 35136182
Alignment:
| Q |
112 |
tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg |
191 |
Q |
| |
|
|||||| |||| ||||||| ||| |||||||| | |||| |||||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
35136262 |
tcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattg |
35136182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 1091 - 1340
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||||| | || |||||||||| |||| ||| |||| || | | |
|
|
| T |
1091 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaacca |
1190 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
1191 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
1290 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1291 |
aacatgtaatttcaccaacaatcatacaattattatcaattcatgcatac |
1340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 3877 - 3629
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||| | || |||||||||||| |||||| |||||||| | || |||| |||| |||||||| |||| |||| | |
|
|
| T |
3877 |
tttcaccaaaacaccaaca-caattcaaactctcctcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatcca |
3779 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt--gcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | |||| | ||| || |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
3778 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttg |
3679 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
3678 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
3629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 94; Significance: 7e-46; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 20445646 - 20445895
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |
|
|
| T |
20445646 |
tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca |
20445745 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| ||||||||||| | ||||||||| ||||| | | ||||||| | ||| |||||||||||| |||| |||||| | | || || |
|
|
| T |
20445746 |
taacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttg |
20445845 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
20445846 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
20445895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 20531411 - 20531660
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |
|
|
| T |
20531411 |
tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca |
20531510 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| ||||||||||| | ||||||||| ||||| | | ||||||| | ||| |||||||||||| |||| |||||| | | || || |
|
|
| T |
20531511 |
taacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttg |
20531610 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
20531611 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
20531660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 69 - 327
Target Start/End: Complemental strand, 20893933 - 20893673
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||| |||||||| |
|
|
| T |
20893933 |
caattcacaaatttcttcaaaacaccaacaacaattcaaattctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatca |
20893834 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt |
266 |
Q |
| |
|
|||| || | ||||||||||| |||||||||||| ||||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |
|
|
| T |
20893833 |
attaacagtcataacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt |
20893734 |
T |
 |
| Q |
267 |
ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | | ||||||||||||| |||| |||||||||||||||| |
|
|
| T |
20893733 |
gttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatac |
20893673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 20931312 - 20931561
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||| || |||||||||| |||||||| |||| || | | |
|
|
| T |
20931312 |
tttcaccaaaacaccaacaacaattcaaattctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaacca |
20931411 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| |||| | | ||||||| | |||| |||||||||||||||||| |||||| ||||||| | |
|
|
| T |
20931412 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatg |
20931511 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
20931512 |
aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
20931561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 22227777 - 22228022
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || ||||||||| | |||||| |||| ||| | |
|
|
| T |
22227777 |
tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca |
22227875 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| | ||||||||||||||||| |||||| ||||||||| |
|
|
| T |
22227876 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg |
22227975 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgca |
324 |
Q |
| |
|
|||||| ||| | || |||||||||||| |||| ||||||||||||| |
|
|
| T |
22227976 |
aacatgtaatttcactaacaatcatacaattatcatcaattcatgca |
22228022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 22232474 - 22232719
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || ||||||||| | |||||| |||| ||| | |
|
|
| T |
22232474 |
tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca |
22232572 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| | ||||||||||||||||| |||||| ||||||||| |
|
|
| T |
22232573 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg |
22232672 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgca |
324 |
Q |
| |
|
|||||| ||| | || |||||||||||| |||| ||||||||||||| |
|
|
| T |
22232673 |
aacatgtaatttcactaacaatcatacaattatcatcaattcatgca |
22232719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 51452589 - 51452708
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
51452589 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
51452688 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
51452689 |
tattatcaattcatgcatac |
51452708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 327
Target Start/End: Original strand, 41394191 - 41394438
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca |
181 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||| | || || ||| | |
|
|
| T |
41394191 |
caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaata |
41394290 |
T |
 |
| Q |
182 |
acatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa |
279 |
Q |
| |
|
|||||||||| ||||||||| | ||||| ||| | ||| | | ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| || |
|
|
| T |
41394291 |
acatcaattgagcaagaatcaaatctcaacataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa |
41394390 |
T |
 |
| Q |
280 |
catggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||| || | ||||||||||||||| |||| ||||||| |||||||| |
|
|
| T |
41394391 |
catgtaacttcaccaacaatcatacaattatcatcaatttatgcatac |
41394438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 20913004 - 20913246
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||| ||| |||| || | | |
|
|
| T |
20913004 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaacca |
20913103 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| |||| ||| ||||| || ||||||| | ||| |||||||||||||||||| |||||| ||||||| | |
|
|
| T |
20913104 |
taacatcaattgaacaagaatca------aatt-aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatg |
20913196 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
20913197 |
aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
20913246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 2116228 - 2116471
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||| |
|
|
| T |
2116228 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc |
2116327 |
T |
 |
| Q |
187 |
aattgcacaagaatc-atagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatg |
283 |
Q |
| |
|
||||| |||||||| | | |||| | ||| | ||| | | ||||||| | ||| |||| ||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
2116328 |
aattgagcaagaatcaaaatatcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatg |
2116427 |
T |
 |
| Q |
284 |
gaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
2116428 |
taatttcaccaacaatcatacaattatcatcaattcatgcatac |
2116471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 37844746 - 37844497
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | | |
|
|
| T |
37844746 |
tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaacca |
37844648 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttca-taacttctcatttctacatattt |
276 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||| ||||| | | |||||||| ||| |||||||||||| || || |||||| | | || || |
|
|
| T |
37844647 |
taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctactt |
37844548 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
37844547 |
gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
37844497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 45051554 - 45051639
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
45051554 |
gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
45051639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 51452557 - 51452602
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51452557 |
caatcataacatataatcatacactccatcataattcaacaacaac |
51452602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 45051416 - 45051496
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||| | |||||| |
|
|
| T |
45051416 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaataacatc |
45051496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 18601402 - 18601153
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| || |||| |||||||||||||||||||||| | |||||| | || |||||| || | | ||| | || ||| | |
|
|
| T |
18601402 |
tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca |
18601304 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||||| |||| | ||||| | ||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |
|
|
| T |
18601303 |
taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat |
18601204 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| || |||||||||||||||| |
|
|
| T |
18601203 |
gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatac |
18601153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 5072672 - 5072611
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa |
142 |
Q |
| |
|
||||||||||||||||||| ||| || |||| |||||||||||||||||||||| | |||||| |
|
|
| T |
5072672 |
tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaa |
5072611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 5072508 - 5072424
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcata |
326 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || ||||||||||||||| |
|
|
| T |
5072508 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata |
5072424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 49967607 - 49967638
Alignment:
| Q |
70 |
aattcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
49967607 |
aattcacaaatttcaccaaaacaccaacaaca |
49967638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 20254308 - 20254389
Alignment:
| Q |
109 |
ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt |
190 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||| || ||||| | || ||||||| | | |||| |||||||||||||| |
|
|
| T |
20254308 |
ttttcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatgtctcagcaacaacaacatcaatt |
20254389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 22143611 - 22143531
Alignment:
| Q |
112 |
tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg |
191 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| ||| |||||| ||||||||||||||| |
|
|
| T |
22143611 |
tcatcatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcagcaacaacatcaattg |
22143531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 48155 - 48403
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| | || ||||||||| |||||||| |||| |||| | |
|
|
| T |
48155 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatcta |
48253 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| |||| |||| |
|
|
| T |
48254 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg |
48353 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
48354 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
48403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 107715 - 107963
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || ||||||||| |||||||| |||| |||| | |
|
|
| T |
107715 |
tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatcca |
107813 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | ||| |||||||||| | ||||| |||||| | || |||| |
|
|
| T |
107814 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttg |
107913 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
107914 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
107963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 64812 - 64585
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| || | || ||| | || ||| | |
|
|
| T |
64812 |
tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca |
64714 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||||| |||| | ||||| | ||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| ||||||||| |
|
|
| T |
64713 |
taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt |
64614 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcataca |
305 |
Q |
| |
|
||||||| ||| | ||||||||||||||| |
|
|
| T |
64613 |
aaacatgtaatttcaccaacaatcataca |
64585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 48565 - 48814
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| | | | |
|
|
| T |
48565 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca |
48664 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatcca-tttgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||||| |||||| | | ||||| | | ||||||| | | | |||||||||||| ||||| |||||| | | ||||| |
|
|
| T |
48665 |
taacatcaattgaacaagaatcataactcaatctagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttg |
48764 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
48765 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
48814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 36065 - 36137
Alignment:
| Q |
84 |
accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa |
157 |
Q |
| |
|
|||| |||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || ||||||||| |
|
|
| T |
36065 |
accataacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaa |
36137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 123460 - 123211
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | | |
|
|
| T |
123460 |
tttcaccaaaacaccaacaacaattcaaattctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaacca |
123361 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||||| || ||| ||| ||||| | | ||||||| | ||| |||||||||||| ||||| |||||| | | ||||| |
|
|
| T |
123360 |
taacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg |
123261 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
123260 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
123211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 255106 - 255074
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
255106 |
caattcacaaatttcacgaaaacaccaacaaca |
255074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 261712 - 261680
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
261712 |
caattcacaaatttcacgaaaacaccaacaaca |
261680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 1250 - 1003
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | || ||||||||| | ||||| |||| |||| | |
|
|
| T |
1250 |
tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatcca |
1152 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||| ||| |||||||| | | ||||||| ||| ||||| | | ||||||||| ||| |||||||||||| ||||| | |||| ||||||||| |
|
|
| T |
1151 |
taacatcacttgaacaagaataaaatctcaatt-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttg |
1053 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
1052 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
1003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0125 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0125
Description:
Target: scaffold0125; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 41622 - 41864
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||| || |||||||||| |
|
|
| T |
41622 |
aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatc |
41721 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg |
283 |
Q |
| |
|
||||| ||| | || | | |||||||| ||||||| | ||||||| ||| ||| ||||||||||| |||||| ||||| |||||| || |||||| |
|
|
| T |
41722 |
aattgaacatggttctcatcataattcaacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatg |
41820 |
T |
 |
| Q |
284 |
gaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
41821 |
taatttcaccaacaatcatacaattatcatcaattcatgcatac |
41864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0622 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0622
Description:
Target: scaffold0622; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 9338 - 9480
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |
|
|
| T |
9338 |
caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca |
9437 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaat |
211 |
Q |
| |
|
|||| || | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
9438 |
attaacagccataacatcaattgaacaagaatcataactcaat |
9480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0215 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0215
Description:
Target: scaffold0215; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 9626 - 9384
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||| |
|
|
| T |
9626 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc |
9527 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
| ||| ||||||||| | ||||| | ||| | ||| | | ||||||| | ||| |||| ||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
9526 |
atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt |
9427 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
9426 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
9384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0215; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 16524 - 16282
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | |||||| |
|
|
| T |
16524 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc |
16425 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
| ||| ||||||||| | ||||| | ||| | ||| | | ||||||| | ||| |||| ||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
16424 |
atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt |
16325 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
16324 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
16282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 80 - 324
Target Start/End: Complemental strand, 5498 - 5254
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||| || |||||||| |||| ||| | |
|
|
| T |
5498 |
tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattca |
5401 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatttg--cacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | ||||||| ||| ||| ||||||||||||||||| |||||| ||||||||| |
|
|
| T |
5400 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatattt |
5302 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgca |
324 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
5301 |
gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca |
5254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 80; Significance: 2e-37; HSPs: 4)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 22637 - 22756
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
22637 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
22736 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
22737 |
tattatcaattcatgcatac |
22756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 26892 - 27011
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
26892 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
26991 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
26992 |
tattatcaattcatgcatac |
27011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 22605 - 22650
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22605 |
caatcataacatataatcataccctccatcataattcaacaacaac |
22650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 26860 - 26905
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26860 |
caatcataacatataatcataccctccatcataattcaacaacaac |
26905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 1748 - 1629
Alignment:
| Q |
209 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
1748 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
1649 |
T |
 |
| Q |
308 |
tattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
1648 |
tattatcaattcatgcatac |
1629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 1780 - 1735
Alignment:
| Q |
9 |
caatcataacatataatcatacactccatcataattcaacaacaac |
54 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1780 |
caatcataacatataatcataccctccatcataattcaacaacaac |
1735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 12083 - 12329
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
|||||| |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||| || | |||||| |||| ||| | |
|
|
| T |
12083 |
tttcactaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattca |
12181 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattt-gcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||||| || ||||| | | ||||||| | |||| |||||||||||| ||||| |||||| |||| ||||| |
|
|
| T |
12182 |
taacatcaattgaacaagaatcaaatctcaatt--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacattta |
12279 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| | | | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
12280 |
aacatgtattttcaccaacaatcatacaattatcatcaattcatgcatac |
12329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0132
Description:
Target: scaffold0132; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 13480 - 13722
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||| |||| |||||||||| ||||| ||||| |||||||||| |||||||| ||||||||||||| |||||||| |||| || |||||||||| |
|
|
| T |
13480 |
aaaacacctacaaaaattcaaattctcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatc |
13579 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| ||| | || | | |||||||| ||||||| | ||||||||| ||| |||||||||||| |||||| ||||| |||||| || |||||| |
|
|
| T |
13580 |
aattgaacatggttctcatcataattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgt |
13679 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
13680 |
aatttcaccaacaatcatacaattatcatcaattcatgcatac |
13722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 79; Significance: 6e-37; HSPs: 3)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 128464 - 128216
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || ||||||||| |||||||| |||| |||| | |
|
|
| T |
128464 |
tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatcca |
128365 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt--gcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||||| ||| ||||| | |||| | ||| || |||||||||||| ||||| || | |||| |||| |
|
|
| T |
128364 |
taacatcaattgaacaagaatcaaatctcaatt-aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttg |
128266 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
128265 |
aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
128216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 31942 - 31884
Alignment:
| Q |
99 |
acaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaa |
157 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||| | |||||| | || ||||||||| |
|
|
| T |
31942 |
acaattcaaattctcatcattaatccatgaatatgcaaacccaagcaattattcatcaa |
31884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 101
Target Start/End: Original strand, 22650 - 22678
Alignment:
| Q |
73 |
tcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22650 |
tcacaaatttcaccaaaacaccaacaaca |
22678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0498 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0498
Description:
Target: scaffold0498; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 8846 - 9094
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||| | || ||||||||| |||||||| |||| |||| | |
|
|
| T |
8846 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatcca |
8944 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| |||||||||||| ||||| ||||| |||||| || |
|
|
| T |
8945 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattg |
9044 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | |||||||||| |||| |||| ||| |||||||||||| |
|
|
| T |
9045 |
aacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatac |
9094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0413 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0413
Description:
Target: scaffold0413; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 6358 - 6111
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | || ||||||||| | |||| |||| |||| | |
|
|
| T |
6358 |
tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatcca |
6260 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||| ||| |||||||||| | ||||||| ||| ||||| | | ||||||| | ||| |||||||||| | ||||| | |||| ||||||||| |
|
|
| T |
6259 |
taacatcacttgaacaagaatcaaatctcaatt-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttg |
6161 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
6160 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
6111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0106 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0106
Description:
Target: scaffold0106; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 327
Target Start/End: Original strand, 41686 - 41945
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct |
168 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| | || |||||| |||||||||| |||||||| | ||||||||||| |||||||| | |
|
|
| T |
41686 |
caattcacaa-tttcaccaaaacaccaacaacaattcaaattctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaaca |
41784 |
T |
 |
| Q |
169 |
attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt |
266 |
Q |
| |
|
|||| || | | | ||||||||| |||||||||||| |||||| ||| ||||| | | ||||||| | ||| |||||||||||| || || |||||| |
|
|
| T |
41785 |
attaacagccatagcatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcattt |
41884 |
T |
 |
| Q |
267 |
ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||||| | |||| ||| | ||||||||| ||| |||| |||||||||||||||| |
|
|
| T |
41885 |
ttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatac |
41945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 83 - 327
Target Start/End: Complemental strand, 34755 - 34507
Alignment:
| Q |
83 |
caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca |
181 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||||| | || || ||| | |
|
|
| T |
34755 |
caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaata |
34656 |
T |
 |
| Q |
182 |
acatcaatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaa |
278 |
Q |
| |
|
||||||||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| | |||||||||| |||||| |||| |||| | || | |
|
|
| T |
34655 |
acatcaattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattga |
34556 |
T |
 |
| Q |
279 |
acatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
34555 |
acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
34507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0529 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0529
Description:
Target: scaffold0529; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 2936 - 3179
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||| |||| ||| | |||||||||||| |||||||| | || || ||| |||||| |
|
|
| T |
2936 |
aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatc |
3035 |
T |
 |
| Q |
187 |
aatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatg |
283 |
Q |
| |
|
|||| ||| |||||||| ||||||||||| ||||| | | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || |||||| |
|
|
| T |
3036 |
aattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatg |
3135 |
T |
 |
| Q |
284 |
gaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| ||||||||||| |||| |
|
|
| T |
3136 |
taatttcaccaacaatcatacaattatcatcaattcatggatac |
3179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 247738 - 247489
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||| ||| | |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | |
|
|
| T |
247738 |
tttcaccaaaacaccaacaaccattcaaattctcatcctcagttcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca |
247639 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt--gcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||| ||||| | |||| | ||| || |||||||||||| ||||| |||||| | | ||||| |
|
|
| T |
247638 |
taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttg |
247539 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | ||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
247538 |
aacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatac |
247489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 5356 - 5108
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||||| | |||||||||||| |||||||| |||| || | | |
|
|
| T |
5356 |
tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca |
5258 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||||| |||| | ||| ||||| || ||||||| | ||| |||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
5257 |
taacatcaattgaacaagaatcataactcattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg |
5158 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| | | | |||||||||| |||| |||| ||||||||| |||||| |
|
|
| T |
5157 |
aacatgtactttcaccaacaatcttacaattatcatcaattcacgcatac |
5108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0369 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0369
Description:
Target: scaffold0369; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 324
Target Start/End: Original strand, 3690 - 3936
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||| || ||||||||| | |||||| |||| ||| | |
|
|
| T |
3690 |
tttcaccaaaacatcaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattca |
3788 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctca-tttctacatattt |
276 |
Q |
| |
|
||||||||||| |||||||||| | ||||| | ||| ||||| | | ||||||| | ||| | |||||||| |||||||| ||| ||| ||||||||| |
|
|
| T |
3789 |
taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatattt |
3888 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgca |
324 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
3889 |
gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca |
3936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1542 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1542
Description:
Target: scaffold1542; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 327
Target Start/End: Complemental strand, 828 - 581
Alignment:
| Q |
82 |
tcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca |
181 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||| ||||| | |||||||| |||||||| | ||||||||||||| |||||||| ||||||| | | | |
|
|
| T |
828 |
tcaccaaaacaccaacaaccattcaaattctcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccata |
729 |
T |
 |
| Q |
182 |
acatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa |
279 |
Q |
| |
|
||||||||| |||||||||||| || ||| ||| ||| | | ||||||| | ||| | |||||||||| |||| |||||| | | ||||| || |
|
|
| T |
728 |
acatcaattaaacaagaatcataacttaatctaacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaa |
629 |
T |
 |
| Q |
280 |
catggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
628 |
catgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 70 - 327
Target Start/End: Original strand, 171863 - 172121
Alignment:
| Q |
70 |
aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta |
169 |
Q |
| |
|
||||||| |||||||| ||| ||||||||||||| || | || | || ||| |||||||||| ||||| || | ||||||||||||| |||||||| | |
|
|
| T |
171863 |
aattcaccaatttcacaaaaccaccaacaacaatccatttcttaa-caacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa |
171961 |
T |
 |
| Q |
170 |
ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc |
267 |
Q |
| |
|
||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| | | ||||||| | |||| |||||||||||| ||||| |||||| |
|
|
| T |
171962 |
ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg |
172061 |
T |
 |
| Q |
268 |
tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| ||||| |
|
|
| T |
172062 |
ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatac |
172121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 70 - 327
Target Start/End: Original strand, 177566 - 177824
Alignment:
| Q |
70 |
aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta |
169 |
Q |
| |
|
||||||| |||||||| ||| ||||||||||||| || | || | || ||| |||||||||| ||||| || | ||||||||||||| |||||||| | |
|
|
| T |
177566 |
aattcaccaatttcacaaaaccaccaacaacaatccatttcttaa-caacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa |
177664 |
T |
 |
| Q |
170 |
ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc |
267 |
Q |
| |
|
||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| | | ||||||| | |||| |||||||||||| ||||| |||||| |
|
|
| T |
177665 |
ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg |
177764 |
T |
 |
| Q |
268 |
tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| ||||| |
|
|
| T |
177765 |
ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatac |
177824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 70914 - 70882
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaaca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
70914 |
caattcacaaatttcaccaaaacaccaacaaca |
70882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 326
Target Start/End: Original strand, 42965 - 43213
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| | |||||| | || ||||||||| | || ||| | || ||| | |
|
|
| T |
42965 |
tttcaccaaaacaccaaca-caatttaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca |
43063 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||| |||||| | ||||| | ||| ||||| | | ||||||| | |||| ||||||| |||||||||| ||||| ||||||||| |
|
|
| T |
43064 |
taacatcacttgaacacgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatattt |
43163 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcata |
326 |
Q |
| |
|
|||||| ||| | ||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
43164 |
gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata |
43213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 8466 - 8227
Alignment:
| Q |
87 |
aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc |
186 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||| |||| ||||| |||||||| | ||||||||| ||| |||||||| |||| || |||||||||| |
|
|
| T |
8466 |
aaaacaccagcaacaattcaaattctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc |
8367 |
T |
 |
| Q |
187 |
aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg |
284 |
Q |
| |
|
||||| ||| | || | | |||||| ||||||| | ||||||| | ||| |||||||||||| |||||| ||||| |||||| || ||| || |
|
|
| T |
8366 |
aattgaacatggttctcatcataattca---acaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgt |
8270 |
T |
 |
| Q |
285 |
aatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||| | ||||||||||||||| |||| | |||||||||||||| |
|
|
| T |
8269 |
aatttcaccaacaatcatacaattatcaccaattcatgcatac |
8227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 26710 - 26462
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| |||||||||||||||| | |||||| ||||| ||||| ||| |||||| |||||||| | |||||||||||| |||||||| |||| || | | |
|
|
| T |
26710 |
tttcatcaaaacaccaacaacact-caaattctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca |
26612 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| |||||||||||| |||| | ||| ||||| | | ||||||| | ||| | |||||||||| ||||| |||||| ||||||||| |
|
|
| T |
26611 |
taacatcaattgaacaagaatcataactcattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttg |
26512 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| | | | ||||| |||| |||| |||| ||||||||| |||||| |
|
|
| T |
26511 |
aacatgtactttcaccaataatcttacaattatcatcaattcacgcatac |
26462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 327
Target Start/End: Original strand, 271983 - 272241
Alignment:
| Q |
70 |
aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta |
169 |
Q |
| |
|
||||||| |||||||| ||| ||||||||||||| || | | || | |||| |||||||||| |||||||| | ||||||||||||| |||||||| | |
|
|
| T |
271983 |
aattcactaatttcacaaaaccaccaacaacaatccatttctctataa-caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa |
272081 |
T |
 |
| Q |
170 |
ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc |
267 |
Q |
| |
|
||| || | | |||| |||||| |||||||||||| |||||| |||| ||||| | | ||||||| | |||| |||||||||||| ||||| |||||| |
|
|
| T |
272082 |
ttaacagctataacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg |
272181 |
T |
 |
| Q |
268 |
tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
| | ||||| |||||| ||| | ||| |||||||||| |||| |||||||||| ||||| |
|
|
| T |
272182 |
ttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatac |
272241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 14344 - 14096
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || ||| | || ||||||||| | |||||| | | ||| | |
|
|
| T |
14344 |
tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattca |
14246 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||| ||||| ||||||||| | ||||| | | | ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| ||||||||| |
|
|
| T |
14245 |
taacattaattgaacaagaatccaatctcaaattatcaacaacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttc |
14146 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | || |||||||||| | |||| |||||||||||||||| |
|
|
| T |
14145 |
aacatgtaatttcactaacaatcatataattatcatcaattcatgcatac |
14096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 21399 - 21151
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| |||||||||||||| | || ||| | || ||||||||| | |||||| | || ||| | |
|
|
| T |
21399 |
tttcaccaaaacaccaaca-cagttcaaattttcatcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattca |
21301 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta |
277 |
Q |
| |
|
||||||||||| ||||||||| | ||||| | ||| ||||| | | ||||||| | ||| || |||| |||||||||| |||||| ||||||||| |
|
|
| T |
21300 |
taacatcaattgaacaagaatccaatctcaaattaacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttg |
21201 |
T |
 |
| Q |
278 |
aacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||| ||| | || |||||||||| | |||| ||||||| ||| |||| |
|
|
| T |
21200 |
aacatgtaatttcactaacaatcatataattatcatcaattaatggatac |
21151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0104 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0104
Description:
Target: scaffold0104; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 48482 - 48603
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || ||||||||| | |||||| |||| |||| | |
|
|
| T |
48482 |
tttcatcaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatcca |
48580 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatca |
202 |
Q |
| |
|
|||||||| || |||||||||| |
|
|
| T |
48581 |
taacatcaagtgaacaagaatca |
48603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1560 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1560
Description:
Target: scaffold1560; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 147 - 26
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| | || ||||||||| | |||||| |||| ||| | |
|
|
| T |
147 |
tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca |
49 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatca |
202 |
Q |
| |
|
|| |||| ||| |||||||||| |
|
|
| T |
48 |
taatatcatttgaacaagaatca |
26 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0116 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0116
Description:
Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 327
Target Start/End: Original strand, 3 - 252
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa |
179 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| |||| |||||||||| | |||||| | || |||||| || | || ||| | || ||| | |
|
|
| T |
3 |
tttcaccaaaacaccaaca-caactcaaattctcatcaacaattcatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca |
101 |
T |
 |
| Q |
180 |
caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt |
276 |
Q |
| |
|
||||||| ||| ||||| |||| | ||||| | ||| ||||| | | ||||||| | ||| ||||||| | |||||||| |||||| ||||||||| |
|
|
| T |
102 |
taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatatacataacttatcatttttacatattt |
201 |
T |
 |
| Q |
277 |
aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| ||| | ||||||||||||||| | || |||||||||||||||| |
|
|
| T |
202 |
aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatac |
252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0772 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0772
Description:
Target: scaffold0772; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 327
Target Start/End: Original strand, 5660 - 5745
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||||||||||||||| |
|
|
| T |
5660 |
gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatac |
5745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0420 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0420
Description:
Target: scaffold0420; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 13445 - 13360
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
13445 |
gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
13360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0066
Description:
Target: scaffold0066; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 324
Target Start/End: Original strand, 54415 - 54630
Alignment:
| Q |
112 |
tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat |
211 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||| | || |||||||| ||| | ||||||||||||| | ||| |||||| | |||| | |
|
|
| T |
54415 |
tcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatt |
54514 |
T |
 |
| Q |
212 |
tcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaacatggaatctaaccaacaatcatacact |
307 |
Q |
| |
|
||||| ||||||| || ||||||| | ||| | |||| ||||||||||| ||||| |||||| || ||||||| ||| | ||| ||||||||||| | |
|
|
| T |
54515 |
tcaacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaat |
54613 |
T |
 |
| Q |
308 |
tattatcaattcatgca |
324 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
54614 |
tatcatcaattcatgca |
54630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0361 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0361
Description:
Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 3183 - 3262
Alignment:
| Q |
88 |
aaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
|||||||||||||||||| |||| || |||||||| |||||||||| ||||||||| |||||||||||| |||||||| |
|
|
| T |
3183 |
aaacaccaacaacaattccaattctcttcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatc |
3262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1404 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1404
Description:
Target: scaffold1404; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 1815 - 1867
Alignment:
| Q |
80 |
tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg |
133 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
1815 |
tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatg |
1867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 51314 - 51229
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| |||||||||||||||| |
|
|
| T |
51314 |
gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac |
51229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 89586 - 89501
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
|||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
89586 |
gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac |
89501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 77139 - 76984
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc |
167 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||| ||| || |||||| ||| ||||||| ||| |||||||| | |||| ||||||| |||| ||| |
|
|
| T |
77139 |
caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatc |
77041 |
T |
 |
| Q |
168 |
tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||||| ||||||||||||||| ||| ||||| | | ||||||||| ||||||| |
|
|
| T |
77040 |
acttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacat |
76984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1711 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1711
Description:
Target: scaffold1711; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 1424 - 1339
Alignment:
| Q |
242 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatac |
327 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || |||||||||||||||| |
|
|
| T |
1424 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatac |
1339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 132542 - 132505
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaacaacaattca |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
132542 |
caattcacaaatttcaccaaaacaccaacaacatttca |
132505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 197525 - 197390
Alignment:
| Q |
89 |
aacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatca |
187 |
Q |
| |
|
|||| ||||||||| |||| || |||||||||| ||||| | ||| | |||||||| |||| |||||||| |||| ||| |||||| ||||||||||| |
|
|
| T |
197525 |
aacaacaacaacaactcaa-ttctcatcatcaaagcatgatttatgaagacccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatca |
197427 |
T |
 |
| Q |
188 |
attgcacaagaatcatagctcaattcaactacaacat |
224 |
Q |
| |
|
|||| ||| ||||| | | ||||||||| ||||||| |
|
|
| T |
197426 |
attgaacatgaatctcatcacaattcaacaacaacat |
197390 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 104872 - 104793
Alignment:
| Q |
112 |
tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt |
190 |
Q |
| |
|
||||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| ||| |||||| |||||||||||||| |
|
|
| T |
104872 |
tcatcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt |
104793 |
T |
 |
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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0389
Description:
Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 10642 - 10739
Alignment:
| Q |
94 |
caacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg |
191 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||| ||| | |||||| | |||| | |||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
10642 |
caacaacaattcat-ttttcatcatcaattcatgaattatgaacacccaagccatgaatgatcaacaacaacatcacttagcaaaaacaacatcaattg |
10739 |
T |
 |
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Target: scaffold0970 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0970
Description:
Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 2471 - 2532
Alignment:
| Q |
130 |
tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg |
191 |
Q |
| |
|
|||| |||||||| | |||| |||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
2471 |
tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg |
2532 |
T |
 |
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Target: scaffold0240 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0240
Description:
Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 7522 - 7551
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaaca |
98 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
7522 |
caattcacaaatttcaccaaaacaccaaca |
7551 |
T |
 |
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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 38253 - 38282
Alignment:
| Q |
69 |
caattcacaaatttcaccaaaacaccaaca |
98 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
38253 |
caattcacaaatttcaccaaaacaccaaca |
38282 |
T |
 |
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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0700
Description:
Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 2548 - 2612
Alignment:
| Q |
137 |
acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatc |
201 |
Q |
| |
|
|||||||| |||| |||||||| |||| ||| |||||| ||||||||||||||| ||| ||||| |
|
|
| T |
2548 |
acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatc |
2612 |
T |
 |
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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0123
Description:
Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 8007 - 8087
Alignment:
| Q |
112 |
tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg |
191 |
Q |
| |
|
|||||| |||| ||||||| ||| |||||||| | |||| |||||||| |||||||| ||||| ||||||||||||||| |
|
|
| T |
8007 |
tcatcaccaattcatgaattatgaatacccaagctatgaatcatcaacaacaacatcacatagcaacaacaacatcaattg |
8087 |
T |
 |
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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 116806 - 116687
Alignment:
| Q |
68 |
tcaattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaa-tatgtatacccaaacgatgattcatcaactacaacat |
166 |
Q |
| |
|
||||||||| ||||| || ||| |||||||||||| || | ||||||||| ||| |||||| |||| | |||||| | |||| |||||||| |||| || |
|
|
| T |
116806 |
tcaattcaccaattttacaaaaccaccaacaacaa-tccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatat |
116708 |
T |
 |
| Q |
167 |
ctattagcatcaacaacatca |
187 |
Q |
| |
|
| |||||| ||||||||||| |
|
|
| T |
116707 |
cacttagcaacaacaacatca |
116687 |
T |
 |
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