View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14595_high_2 (Length: 399)
Name: NF14595_high_2
Description: NF14595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14595_high_2 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 399
Target Start/End: Original strand, 7831691 - 7832069
Alignment:
| Q |
1 |
aaaccgagaggaactggagagagtttgttctggaaaggagtcgaagatgaagtctcagctccaagacgtcgctattggggaagcgttgagttacaagatg |
100 |
Q |
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| T |
7831691 |
aaaccgagaggaactggagagagtttgttctggaaaggagccgaagatgaagtctcagctccaagacgtcgctattggggaagcgttgagttacaagatg |
7831790 |
T |
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| Q |
101 |
gagatccacttgtttggagaagctggaatgggaaagaaaccttttgggagagggtgagaaatattgttattctgttgaaatgccaaaattgttctgtaga |
200 |
Q |
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| T |
7831791 |
gagatccacttgtttggagaagctggaatgggaaagaaaccttttgggagagggtgagaaatattgttattctgttgaaatgccaaaattgttctgtaga |
7831890 |
T |
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| Q |
201 |
ggaagcttcaagctcaagtaatgtagagtatttggatcctgaagtggaagatttgttgaggagtatagagaaagatacaatctcaatgagcttggatgaa |
300 |
Q |
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| T |
7831891 |
ggaagcttcaagctcaagtaatgtagagtatttggatcctgaagtggaagatttgttgaggagtatagagaaagatacaat------------------- |
7831971 |
T |
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| Q |
301 |
tctcaagggaaattgaaggcatatattgttccagaagatgtacctatttctgagaagtacatgatggaaactgcaatcatcaaaggacaggaaagattg |
399 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7831972 |
-ctcaagggaaattgaaggcatatattgttccagaagatgtacctatttctgagaagtacatgatggaaactgcaatcatcaaaggacaggaaagattg |
7832069 |
T |
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