View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14595_high_3 (Length: 285)
Name: NF14595_high_3
Description: NF14595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14595_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 9829961 - 9830240
Alignment:
| Q |
1 |
atcaatttatgttgacttatattttgggagagagaatatatttttaatgtgtattggacattaaacctaaatacttttaaacctttgtttgttgagtcaa |
100 |
Q |
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| T |
9829961 |
atcaatttatgttgacttatattttgggagagagaatatatttttaatgtgtattggacattaaacctaaatacttttaaacctttgtttgttgagtcaa |
9830060 |
T |
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| Q |
101 |
acctttccgcaagaacaacccgtaaaacacttctaattaatttataggtccttattgcaacaaaataaggccttgtcaagtaacatttggctcaaatgta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
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| T |
9830061 |
acctttccgcaagaacaacccgtaaaacacttctaattaatttataggtccttattgcaacaaaataaggcattgtcaagtaaaatttggctcaaatgta |
9830160 |
T |
|
| Q |
201 |
atgaaagcaaaaattttagttgaagaaaacttgtgttgagttgcttacactactaaaattaaagatgg-ccaaccatatc |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
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| T |
9830161 |
atgaaagcaaaaattttagttgaagaaaacttgtgttgagttgcttccactactaaaattaaagatggcccaaccatatc |
9830240 |
T |
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