View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14598_low_4 (Length: 320)
Name: NF14598_low_4
Description: NF14598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14598_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 16 - 302
Target Start/End: Original strand, 39077350 - 39077636
Alignment:
| Q |
16 |
acatcatcgaattgaattgctgtgtgtgctgataatcgaacacgtcgatcacgaggacctttcgcagtgtataccttactatgtctgtcttttctacctg |
115 |
Q |
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| T |
39077350 |
acatcatagaattgaattgctgtgtgtgctgataatcgaacacgtcgatcacgaggacctttcgcagtgtataccttactatgtctgtcttttctacctg |
39077449 |
T |
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| Q |
116 |
ttgcccttacaatgtggcctccttgaacttgaactatttctcctcctgtgctcttcattcccattaatcctcttgtataaattttgtgtctttgaatttg |
215 |
Q |
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| T |
39077450 |
tcgcccttacaatgtggcctccttgaacttgaactatttctcctcctgtgctcttcattcccattaatcctcttgtataaattttgtgtctttgaatttg |
39077549 |
T |
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| Q |
216 |
taaagatagttctattgtgtttctgtttcttgcgtatgcatattgatatttgtgtagtgtgaaatttgatgccacttgagtcaatgt |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39077550 |
taaagatagttctattgtgtttctgtttcttgcgtatgcatattgatatttgtgtagtgtgaaatttgatgccacttgagtcaatgt |
39077636 |
T |
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