View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_high_116 (Length: 252)
Name: NF1459_high_116
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_high_116 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 103626 - 103867
Alignment:
| Q |
11 |
cacagagatcattgtttgacaggtctctgcacagcacatgaaaataattagccaaatgaattataagagctaggtggagtggagaagctcgaataagata |
110 |
Q |
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| T |
103626 |
cacagagatcattgtttgacaggtctctgcacagcacatgaaaataattagccaaatgaattataagagctaggtggagtggagaagctcgaataagata |
103725 |
T |
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| Q |
111 |
agagactcacaaaatcttgagatttttcagtttagtgagttcccttggtattcttcctgtcagcttgttgttgttgagtcgcctgcatagcatcatataa |
210 |
Q |
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| T |
103726 |
agagactcacaaaatcttgagatttttcagtttagtgagttcccttggtattcttcctgtcagcttgttgttgttgagtcgcctgcatagcatcatataa |
103825 |
T |
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| Q |
211 |
tatattttacgatcaaagaaagttgtgtccaccgacacatgt |
252 |
Q |
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| T |
103826 |
tatattttacgatcaaagaaagttgtgtccatcgacacatgt |
103867 |
T |
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