View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_high_124 (Length: 249)
Name: NF1459_high_124
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_high_124 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 28862176 - 28862414
Alignment:
| Q |
1 |
tttaatctcattgatattattctgacttaattgcagaatttgatcaatacaatactagtgaaattgcaaatatggatcgaccattgggtcgatgtgcaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28862176 |
tttaatctcattgatattattctgacttaattgcagaatttgatcaatacaatactagtgaaattgcaaatatggatcgaccattgggtcgatgtgcaac |
28862275 |
T |
|
| Q |
101 |
actgtctgcagcattcttttccgcattgaataaaactgaggagaactcttcttctaaccaggtggacaatcccaatgataagtcagatcctcttctgcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
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| T |
28862276 |
actgtctgcagcattcttttccgcattgaataaaactgaggagaactcttcttctaaccaggtggacaatcccaatgataaggcagattctcttctgcaa |
28862375 |
T |
|
| Q |
201 |
aactcagttccaatgattactgaagcttgggaatctctg |
239 |
Q |
| |
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||||||||||||||||||| ||||||||||||||||||| |
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| T |
28862376 |
aactcagttccaatgattaatgaagcttgggaatctctg |
28862414 |
T |
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