View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_high_133 (Length: 245)
Name: NF1459_high_133
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_high_133 |
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Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 5035418 - 5035622
Alignment:
| Q |
1 |
aagggtgaagaaagctttcacacacccctctgatttgaagaatttggtgttcagcataatcagaaattgtggaagatggctttaatctcaagtacgagga |
100 |
Q |
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| T |
5035418 |
aagggtgaagaaagctttcacacacccctctgatttgaagaatttggtgttcagcataatcagaaattgtggaagatggctttaatctcaagtacgagga |
5035517 |
T |
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| Q |
101 |
gtgaagacattctatcaaattttgaatgaattgttttatgtaatttaataacttttatagcagtgtttgtgaaataaaaaacttacaaagcacatatatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
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| T |
5035518 |
gtgaagacattctatcaaattttgaatgaattgttttatgtaatttaataacttttataacagagtttgtgaaataaaaaacttacaaagcacatatatt |
5035617 |
T |
|
| Q |
201 |
aaaga |
205 |
Q |
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||||| |
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| T |
5035618 |
aaaga |
5035622 |
T |
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