View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_high_134 (Length: 244)
Name: NF1459_high_134
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_high_134 |
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Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 51901467 - 51901704
Alignment:
| Q |
1 |
catgtttgtgatgaatgatgatgtatcaaaccaaattaatgaggagaatgatatttatgttttgctatcttattcagttatttgtgttatgttaaacaag |
100 |
Q |
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| T |
51901467 |
catgtttgtgatgaatgatgatgtatcaaaccaaattaatgaggagaatgatatttatgttttgatatcttattcagttatttgtgttatgttaaacaag |
51901566 |
T |
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| Q |
101 |
aatgtcctcggttcaagcagtgttttgagattctcac---------atgaatgaatgccatttaattctattgtttctttagtagttattctatttggtc |
191 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
51901567 |
aatgtcctcggttcaagcagtgttttgagattctcacattcttcgaatgaatgaatgcca-ttaattctattgtttctttagtagttattctatttggtc |
51901665 |
T |
|
| Q |
192 |
aatatgataataatgaatctacagcagaaatgcaaaata |
230 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
51901666 |
aatatgataataatgaatctacagcagaaatgcaaaata |
51901704 |
T |
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