View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1459_high_155 (Length: 225)

Name: NF1459_high_155
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1459_high_155
NF1459_high_155
[»] chr8 (25 HSPs)
chr8 (3-225)||(43290878-43291100)
chr8 (1-61)||(35500964-35501024)
chr8 (1-61)||(28927681-28927741)
chr8 (1-61)||(45101396-45101456)
chr8 (1-59)||(21648942-21649000)
chr8 (4-61)||(13267100-13267157)
chr8 (1-62)||(32174953-32175014)
chr8 (1-61)||(6849272-6849332)
chr8 (13-61)||(7279978-7280026)
chr8 (1-61)||(11879501-11879561)
chr8 (1-61)||(11896917-11896977)
chr8 (1-61)||(22852850-22852910)
chr8 (2-61)||(11223871-11223930)
chr8 (1-62)||(34718114-34718176)
chr8 (3-61)||(35633982-35634040)
chr8 (1-61)||(3946240-3946301)
chr8 (1-45)||(12490783-12490828)
chr8 (1-62)||(21273721-21273782)
chr8 (1-61)||(8074735-8074795)
chr8 (1-61)||(21418603-21418663)
chr8 (1-61)||(27630897-27630957)
chr8 (1-61)||(40102023-40102083)
chr8 (1-61)||(41293732-41293792)
chr8 (1-61)||(42012601-42012661)
chr8 (1-61)||(44380625-44380685)
[»] chr4 (38 HSPs)
chr4 (1-61)||(6953399-6953459)
chr4 (1-62)||(52392236-52392297)
chr4 (1-62)||(23347774-23347835)
chr4 (1-61)||(11012141-11012201)
chr4 (1-61)||(46566929-46566989)
chr4 (3-62)||(51039129-51039188)
chr4 (1-62)||(19720652-19720713)
chr4 (1-60)||(2401611-2401671)
chr4 (1-61)||(4896511-4896571)
chr4 (1-61)||(11064100-11064160)
chr4 (1-33)||(24337367-24337399)
chr4 (1-61)||(34116551-34116611)
chr4 (1-61)||(35017153-35017213)
chr4 (1-61)||(36792332-36792392)
chr4 (1-61)||(41609690-41609750)
chr4 (1-61)||(46794512-46794572)
chr4 (1-61)||(55268012-55268072)
chr4 (1-63)||(1031753-1031815)
chr4 (1-63)||(15596394-15596456)
chr4 (1-63)||(18568826-18568888)
chr4 (1-63)||(24772669-24772731)
chr4 (1-63)||(39010148-39010210)
chr4 (1-63)||(44165907-44165969)
chr4 (4-62)||(50158994-50159052)
chr4 (1-61)||(5932167-5932228)
chr4 (1-61)||(22819649-22819710)
chr4 (5-62)||(31240647-31240704)
chr4 (1-62)||(46912810-46912871)
chr4 (1-58)||(47519731-47519788)
chr4 (1-62)||(48099810-48099870)
chr4 (1-61)||(5208338-5208398)
chr4 (1-61)||(10994163-10994223)
chr4 (1-61)||(34259815-34259875)
chr4 (1-61)||(36444406-36444466)
chr4 (1-61)||(40409177-40409237)
chr4 (1-61)||(45277092-45277152)
chr4 (1-61)||(47998594-47998654)
chr4 (1-61)||(53583139-53583199)
[»] chr3 (39 HSPs)
chr3 (1-63)||(51464283-51464345)
chr3 (3-63)||(2482687-2482747)
chr3 (3-63)||(14957834-14957894)
chr3 (1-61)||(30796625-30796685)
chr3 (1-63)||(20380900-20380962)
chr3 (3-61)||(28300661-28300719)
chr3 (1-61)||(7294110-7294171)
chr3 (1-62)||(53718048-53718108)
chr3 (1-61)||(108431-108491)
chr3 (1-61)||(1901937-1901997)
chr3 (1-61)||(1911383-1911443)
chr3 (1-61)||(24537219-24537279)
chr3 (1-61)||(26279884-26279944)
chr3 (1-61)||(35272027-35272087)
chr3 (1-61)||(46473128-46473188)
chr3 (1-63)||(24482973-24483036)
chr3 (3-61)||(18169157-18169215)
chr3 (1-63)||(32457766-32457828)
chr3 (1-63)||(41308998-41309060)
chr3 (5-63)||(50294127-50294185)
chr3 (1-62)||(462412-462473)
chr3 (1-70)||(11173449-11173518)
chr3 (1-62)||(11327107-11327168)
chr3 (1-62)||(37303085-37303146)
chr3 (1-61)||(48405410-48405471)
chr3 (1-61)||(50206980-50207041)
chr3 (1-61)||(54773764-54773825)
chr3 (1-61)||(6126454-6126514)
chr3 (1-61)||(8066355-8066415)
chr3 (1-61)||(9027873-9027933)
chr3 (1-61)||(20215948-20216008)
chr3 (1-61)||(32008033-32008093)
chr3 (1-61)||(32931929-32931989)
chr3 (1-61)||(35425683-35425743)
chr3 (1-61)||(36818956-36819016)
chr3 (1-61)||(41877622-41877682)
chr3 (1-61)||(43176202-43176262)
chr3 (1-61)||(43900768-43900828)
chr3 (1-61)||(44334812-44334872)
[»] chr5 (31 HSPs)
chr5 (1-58)||(18449264-18449321)
chr5 (1-63)||(12661958-12662020)
chr5 (1-63)||(12779617-12779679)
chr5 (1-63)||(34381010-34381072)
chr5 (1-62)||(39595271-39595332)
chr5 (3-63)||(12718393-12718453)
chr5 (1-60)||(41173253-41173313)
chr5 (1-63)||(41460114-41460176)
chr5 (4-61)||(14323982-14324039)
chr5 (1-62)||(28903990-28904051)
chr5 (1-62)||(28940385-28940446)
chr5 (1-62)||(40223796-40223857)
chr5 (1-61)||(1774294-1774354)
chr5 (1-61)||(3634494-3634554)
chr5 (1-61)||(11768001-11768061)
chr5 (1-61)||(23991145-23991205)
chr5 (1-61)||(26660422-26660482)
chr5 (1-61)||(26932014-26932074)
chr5 (1-61)||(36713189-36713249)
chr5 (1-60)||(31025016-31025075)
chr5 (1-63)||(9599739-9599801)
chr5 (1-61)||(8920078-8920139)
chr5 (1-70)||(9594469-9594538)
chr5 (1-62)||(17063864-17063925)
chr5 (1-62)||(19127123-19127184)
chr5 (1-62)||(30574388-30574449)
chr5 (1-61)||(9714147-9714207)
chr5 (1-61)||(18638836-18638896)
chr5 (1-61)||(19376143-19376203)
chr5 (1-61)||(20591485-20591545)
chr5 (1-61)||(25364848-25364907)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-62)||(11637-11698)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-62)||(113624-113685)
[»] chr6 (15 HSPs)
chr6 (1-62)||(18792443-18792504)
chr6 (1-60)||(6435037-6435096)
chr6 (1-70)||(9954539-9954608)
chr6 (1-61)||(29383557-29383617)
chr6 (1-61)||(30906674-30906734)
chr6 (3-62)||(29376728-29376787)
chr6 (1-63)||(8395340-8395402)
chr6 (1-62)||(35213571-35213633)
chr6 (1-61)||(5327602-5327663)
chr6 (1-62)||(32457263-32457324)
chr6 (1-61)||(237409-237469)
chr6 (1-61)||(3339510-3339570)
chr6 (1-61)||(15666784-15666844)
chr6 (1-61)||(28965851-28965911)
chr6 (1-61)||(30796086-30796146)
[»] chr7 (26 HSPs)
chr7 (1-61)||(13437198-13437258)
chr7 (1-63)||(28109955-28110017)
chr7 (1-63)||(40842403-40842465)
chr7 (1-61)||(155992-156053)
chr7 (1-61)||(37899323-37899384)
chr7 (1-62)||(40717247-40717308)
chr7 (1-62)||(48866941-48867002)
chr7 (1-61)||(19426580-19426640)
chr7 (1-61)||(20406541-20406601)
chr7 (1-61)||(37392043-37392103)
chr7 (1-61)||(45607024-45607084)
chr7 (3-61)||(28824503-28824561)
chr7 (1-62)||(5724037-5724098)
chr7 (1-62)||(17500696-17500757)
chr7 (1-62)||(17552457-17552518)
chr7 (6-59)||(28596908-28596961)
chr7 (1-62)||(33050182-33050243)
chr7 (1-61)||(2414077-2414137)
chr7 (1-61)||(4971290-4971350)
chr7 (1-61)||(10591155-10591215)
chr7 (1-61)||(17945068-17945128)
chr7 (1-61)||(21752658-21752718)
chr7 (1-61)||(24267658-24267718)
chr7 (1-61)||(30864428-30864488)
chr7 (1-69)||(33212034-33212102)
chr7 (1-61)||(33684680-33684740)
[»] chr2 (19 HSPs)
chr2 (1-61)||(11229332-11229392)
chr2 (1-61)||(36435681-36435741)
chr2 (1-62)||(30856806-30856867)
chr2 (1-61)||(546396-546456)
chr2 (1-61)||(5455464-5455524)
chr2 (1-61)||(31296856-31296916)
chr2 (1-61)||(36132974-36133034)
chr2 (3-61)||(14954612-14954670)
chr2 (1-63)||(32688555-32688617)
chr2 (4-61)||(5067660-5067717)
chr2 (1-61)||(30977889-30977950)
chr2 (1-61)||(1889147-1889207)
chr2 (1-61)||(2308333-2308393)
chr2 (1-61)||(4738583-4738643)
chr2 (1-61)||(15283261-15283321)
chr2 (1-61)||(30413737-30413797)
chr2 (1-61)||(33296082-33296142)
chr2 (1-61)||(34139049-34139109)
chr2 (1-61)||(42554776-42554836)
[»] chr1 (29 HSPs)
chr1 (1-61)||(11097895-11097955)
chr1 (1-61)||(50226890-50226950)
chr1 (1-63)||(20288350-20288413)
chr1 (1-63)||(32821633-32821695)
chr1 (1-62)||(16658437-16658498)
chr1 (1-62)||(30530410-30530471)
chr1 (4-61)||(31184281-31184338)
chr1 (1-61)||(50328151-50328212)
chr1 (1-61)||(366657-366717)
chr1 (1-61)||(7078511-7078571)
chr1 (1-61)||(30530585-30530645)
chr1 (1-61)||(35846330-35846390)
chr1 (1-61)||(49425738-49425797)
chr1 (1-43)||(22389536-22389578)
chr1 (1-62)||(36577422-36577484)
chr1 (3-61)||(50118909-50118967)
chr1 (1-62)||(15061844-15061905)
chr1 (3-36)||(18954313-18954346)
chr1 (1-62)||(24611843-24611904)
chr1 (1-62)||(34002331-34002392)
chr1 (1-62)||(39010813-39010874)
chr1 (1-61)||(1615036-1615096)
chr1 (1-61)||(18610773-18610833)
chr1 (1-61)||(25302654-25302714)
chr1 (5-61)||(28703140-28703196)
chr1 (1-61)||(30439250-30439310)
chr1 (1-61)||(33675900-33675960)
chr1 (3-63)||(45470853-45470913)
chr1 (1-61)||(48872962-48873021)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1-63)||(11547-11609)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-62)||(6426-6487)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-61)||(27339-27399)
[»] scaffold0111 (1 HSPs)
scaffold0111 (7-63)||(36883-36939)
[»] scaffold0011 (1 HSPs)
scaffold0011 (13-61)||(219687-219735)


Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 43290878 - 43291100
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaacttaaaaccattttaacaatgccaatgcacgatgttaaa 102  Q
    ||||||||| ||| || |||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43290878 tatgagagagaaaattattaaaaagttgtcataaagtggatgtacaaatatcatttctcaacttaaaaccattttaacaatgccaatgcacgatgttaaa 43290977  T
Q  103 ttattttttataatttattgttgtctaaaggggaaagagaatgataaacctagtgttggaaacttagaaggtgggtgtggcaaagagaaggaaggtaacg 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43290978 ttattttttataatttattgttgtctaaaggggaaagagaatgataaacctagtgttggaaacttagaaggtgggtgtggcaaagagaaggaaggtaaca 43291077  T
Q  203 agggacagtgcgccctaaatagc 225  Q
    |||||||||||||||||||||||    
T  43291078 agggacagtgcgccctaaatagc 43291100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35500964 - 35501024
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||||| |||||||||| || |||| ||| |||||||||||||||    
T  35500964 agtatgagagataaagttgttataaagttgtcaaaaagtggttgtataaatatcatttctc 35501024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28927741 - 28927681
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||| |||||||||||||||||||| |||| |||  ||||||||||||||    
T  28927741 agtatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctc 28927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45101456 - 45101396
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||||||||||||| |||| |||  ||||||||||||||    
T  45101456 agtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 45101396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21648942 - 21649000
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttc 59  Q
    ||||||||||| ||||||||||||||||||||||||  ||| |||  ||||||||||||    
T  21648942 agtatgagagagaaagttgttaaaaagttgtcacaaattggttgtacaaatatcatttc 21649000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 13267100 - 13267157
Alignment:
Q  4 atgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||| |||||||||||||||||||||||| |||| ||   ||||||||||||||    
T  13267100 atgagagaaaaagttgttaaaaagttgtcacaaagtggttgaacaaatatcatttctc 13267157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32175014 - 32174953
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||| ||||| ||||||||| ||||||||   ||||||||||||||    
T  32175014 agtatgagagagaaagttgtcaaaaaattgtcacaaagtggatgtacgaatatcatttctca 32174953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6849272 - 6849332
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||| ||||||||||||  ||||||||||||||  ||| ||| |||||||||||||||    
T  6849272 agtatgaaagataaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttctc 6849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 7279978 - 7280026
Alignment:
Q  13 aaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||||| |||||||||| ||||||||  ||||||||||||||    
T  7279978 aaagttgttaaaatgttgtcacaaagtggatgtacaaatatcatttctc 7280026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11879501 - 11879561
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||||||||||||| ||||| ||  | ||||||||||||    
T  11879501 agtatgagagagaaagttgtcaaaaagttgtcacaaagtggacgtacatatatcatttctc 11879561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11896917 - 11896977
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||||||||||||| ||||| ||  | ||||||||||||    
T  11896917 agtatgagagagaaagttgtcaaaaagttgtcacaaagtggacgtacatatatcatttctc 11896977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22852850 - 22852910
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| || |||||||||||| |||| |||  ||||||||||||||    
T  22852850 agtatgagagaaaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctc 22852910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 11223871 - 11223930
Alignment:
Q  2 gtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||| |||||||| || ||||||||||||  |||||||  ||||||||||||||    
T  11223871 gtatgagagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctc 11223930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34718176 - 34718114
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||| | ||||||||||||||  |||||||  |||||||||||||||    
T  34718176 agtatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctca 34718114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 35633982 - 35634040
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| |||||||| |||||||||||| || |||| |||  ||||||||||||||    
T  35633982 tatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtagaaatatcatttctc 35634040  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3946301 - 3946240
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| | ||||||||||||||  |||||||  ||||||||||||||    
T  3946301 agtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctc 3946240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12490783 - 12490828
Alignment:
Q  1 agtatgagagataaagttgt-taaaaagttgtcacaaggtggatgt 45  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||    
T  12490783 agtatgagagagaaagttgtctaaaaagttgtcacaaagtggatgt 12490828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21273721 - 21273782
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||||||| |||| || ||||||||||||  ||| |||  |||||||||||||||    
T  21273721 agtatgagagataaaattgtcaagaagttgtcacaaaatggttgtacaaatatcatttctca 21273782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8074735 - 8074795
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| ||||| |||||||||| |||||| || |||| |||  ||||||||||||||    
T  8074735 agtatgagatataaaattgttaaaaaattgtcataaagtggttgtacaaatatcatttctc 8074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21418603 - 21418663
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||| ||||||| || |||| |||  ||||||||||||||    
T  21418603 agtatgagagagaaagttgtcaaaaggttgtcagaaagtggttgtacaaatatcatttctc 21418663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27630957 - 27630897
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||| |||||| ||  |||||||  ||||||||||||||    
T  27630957 agtatgagagagaaagttgtcaaaaaattgtcataaaatggatgtacaaatatcatttctc 27630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40102083 - 40102023
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||    
T  40102083 agtatgagagagaaagttgtcaaaaagttgtgaaaaagtggttgtacaaatatcatttctc 40102023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41293732 - 41293792
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  ||||||||||||||    
T  41293732 agtatgagagagaaagttgtacaaaagttgtcacaaattggttgtaaaaatatcatttctc 41293792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42012601 - 42012661
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||| ||| || || | ||| |||||||||||||||    
T  42012601 agtatgagagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcatttctc 42012661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44380625 - 44380685
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||| ||| ||||||||||  ||| |||  ||||||||||||||    
T  44380625 agtatgagagagaaagttgtttaaaggttgtcacaaaatggttgtacaaatatcatttctc 44380685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6953399 - 6953459
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  6953399 agtatgagagataaagttgttaaaaagttgtcacaaagtggatgtacaaatatcatttctc 6953459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52392236 - 52392297
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||    
T  52392236 agtatgagagataaagttgtcaaaaagttgtcacaaagtggatgtacaaatatcatttctca 52392297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23347835 - 23347774
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||  |||||||||||||||    
T  23347835 agtatgagagagaaaattgttaaaaagttgtcacaaagtggatgtacaaatatcatttctca 23347774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11012201 - 11012141
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||||||||||||||||||||||||| ||  ||| |||  ||||||||||||||    
T  11012201 agtatgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcatttctc 11012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46566989 - 46566929
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  |||||||||||||| ||||||||  ||||||||||||||    
T  46566989 agtatgagagagaaagttgtctaaaagttgtcacaaagtggatgtacaaatatcatttctc 46566929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 51039129 - 51039188
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||||||||||||||||| ||||||||||||||| || | |||  |||||||||||||||    
T  51039129 tatgagagataaagttgtcaaaaagttgtcacaaagtagttgtacaaatatcatttctca 51039188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19720652 - 19720713
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||| |||||| |||||| || ||||||||||||||  |||||||| |||||||||||||||    
T  19720652 agtaagagagagaaagttattcaaaagttgtcacaaaatggatgtgcaaatatcatttctca 19720713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2401671 - 2401611
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttct 60  Q
    |||||||||||||||||||| | ||||||||||||||  |||||||  |||||||||||||    
T  2401671 agtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttct 2401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4896511 - 4896571
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||| |||| |||||||| ||||||||||||||| |||| |||  ||||||||||||||    
T  4896511 agtatgcgagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 4896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11064100 - 11064160
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| || ||||| ||||||||||||||| |||| |||  ||||||||||||||    
T  11064100 agtatgagagagaatgttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 11064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24337367 - 24337399
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtca 33  Q
    |||||||||||||||||||||||||||||||||    
T  24337367 agtatgagagataaagttgttaaaaagttgtca 24337399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34116551 - 34116611
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||| |||| ||||||||||||||| |||| |||  ||||||||||||||    
T  34116551 agtatgagagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 34116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35017213 - 35017153
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| |||||||||||||||  | | |||  ||||||||||||||    
T  35017213 agtatgagagataaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctc 35017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36792392 - 36792332
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || ||||||||  ||||||||||||||    
T  36792392 agtatgagagaaaaagttgtaaaaaagttgttataaagtggatgtacaaatatcatttctc 36792332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41609690 - 41609750
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||||||||||||  ||||||||||| ||  |||||||  ||||||||||||||    
T  41609690 agtatgagagataaagttgtacaaaagttgtcataaaatggatgtacaaatatcatttctc 41609750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 46794512 - 46794572
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||||| || |||| |||  ||||||||||||||    
T  46794512 agtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 46794572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 55268012 - 55268072
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||||||||||||  ||||||||||||||  ||| |||  ||||||||||||||    
T  55268012 agtatgagagataaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 55268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1031815 - 1031753
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| || ||||| |||||| |||| |||  ||||||||||||||||    
T  1031815 agtatgagagagaaagttgtcaagaagttatcacaaagtggttgtacaaatatcatttctcaa 1031753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15596456 - 15596394
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| | |||||| || |||||||||||| |||| |||  ||||||||||||||||    
T  15596456 agtatgagagagagagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctcaa 15596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18568826 - 18568888
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||| ||||| ||||||||  ||||||||||||||  ||| ||| |||||||||||||||||    
T  18568826 agtataagagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttctcaa 18568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24772731 - 24772669
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| || ||||| |||||||||||| ||  |||||||  ||||||||||||||||    
T  24772731 agtatgagagagaaggttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctcaa 24772669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39010148 - 39010210
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||| ||| |||||||||||||||  ||| |||  ||||||||||||||||    
T  39010148 agtatgagagagaaagctgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctcaa 39010210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44165969 - 44165907
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| ||||| ||||| ||| |||| |||  ||||||||||||||||    
T  44165969 agtatgagagagaaagttgtcaaaaaattgtcgcaaagtggttgtacaaatatcatttctcaa 44165907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 50159052 - 50158994
Alignment:
Q  4 atgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||||| | ||||||||||||||||||||| || ||||||||  | |||||||||||||    
T  50159052 atgagaaagaaagttgttaaaaagttgtcaaaaagtggatgtacatatatcatttctca 50158994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5932167 - 5932228
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||||  |||||||||||| |  ||||||| |||||||||||||||    
T  5932167 agtatgagagagaaagttgttgcaaaagttgtcactaaatggatgtttaaatatcatttctc 5932228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22819710 - 22819649
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||||  ||||||||||||||  |||||||  ||||||||||||||    
T  22819710 agtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctc 22819649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 31240704 - 31240647
Alignment:
Q  5 tgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||| |||||||| |||||||| |||||| |||| |||  |||||||||||||||    
T  31240704 tgagagagaaagttgtaaaaaagttatcacaaagtggttgtacaaatatcatttctca 31240647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46912810 - 46912871
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||||||||| |||| | || |||| |||  |||||||||||||||    
T  46912810 agtatgagagagaaagttgttaaaaaattgtaataaagtggttgtacaaatatcatttctca 46912871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47519731 - 47519788
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcattt 58  Q
    ||||||||||| ||||||||| ||||||||| ||||  |||||||  |||||||||||    
T  47519731 agtatgagagagaaagttgttcaaaagttgttacaaaatggatgtacaaatatcattt 47519788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48099870 - 48099810
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||| ||||||||| || |||| |||||||||| |||| ||| ||||||||||||||||    
T  48099870 agtatgaaagataaagtggtcaaaa-gttgtcacaaagtggttgtataaatatcatttctca 48099810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5208338 - 5208398
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  ||||||||||||||    
T  5208338 agtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 5208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10994163 - 10994223
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| ||||  |||||||||  ||| |||  ||||||||||||||    
T  10994163 agtatgagagataaagttgtcaaaagattgtcacaaaatggttgtacaaatatcatttctc 10994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34259875 - 34259815
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||| || |||||||||||  ||| |||  ||||||||||||||    
T  34259875 agtatgagagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcatttctc 34259815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36444406 - 36444466
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||||||||||| ||| ||  ||| |||  ||||||||||||||    
T  36444406 agtatgagagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctc 36444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40409177 - 40409237
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||  |||||||| || |||||  ||||||||||||||    
T  40409177 agtatgagagagaaagttgtcaaaaaactgtcacaaagtagatgtacaaatatcatttctc 40409237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45277092 - 45277152
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||    
T  45277092 agtatgagagagaaagttgtaaaaaagttgtgagaaagtggttgtacaaatatcatttctc 45277152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47998654 - 47998594
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| ||||  ||| |||  ||||||||||||||    
T  47998654 agtatgagagaaaaagttgtcaaaaagttgttacaaaatggttgtacaaatatcatttctc 47998594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53583139 - 53583199
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||    
T  53583139 agtatgagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctc 53583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51464283 - 51464345
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    |||||||||||||||||||| ||||||||||||||| |||| |||  ||||||||||||||||    
T  51464283 agtatgagagataaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 51464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 2482687 - 2482747
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||| ||||||||| ||||||||||||||  |||||||  ||||||||||||||||    
T  2482687 tatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctcaa 2482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 14957894 - 14957834
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||| ||| |||||||||||||||||||| |||| |||  ||||||||||||||||    
T  14957894 tatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 14957834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30796625 - 30796685
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| || |||||||||||| |||| |||| ||||||||||||||    
T  30796625 agtatgagagaaaaagttgtcaagaagttgtcacaaagtggttgtgcaaatatcatttctc 30796685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20380900 - 20380962
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| || |||||||||||| |||| |||  ||||||||||||||||    
T  20380900 agtatgagagagaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctcaa 20380962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 28300661 - 28300719
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| ||||||||||||||||||||| || |||| |||  ||||||||||||||    
T  28300661 tatgagagagaaagttgttaaaaagttgtcataaagtggttgtacaaatatcatttctc 28300719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7294110 - 7294171
Alignment:
Q  1 agtatgagagataaagttgt-taaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||| |||||||||||| ||||||||  ||||||||||||||    
T  7294110 agtatgagagagaaagttgtctaagaagttgtcacaaagtggatgtacaaatatcatttctc 7294171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53718108 - 53718048
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||| |||| ||||||||||  ||||||| ||||||||||||||||    
T  53718108 agtatgagagagaaagttgtcaaaa-gttgtcacaaaatggatgtttaaatatcatttctca 53718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 108491 - 108431
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||| ||||||||| |||| |||  ||||||||||||||    
T  108491 agtatgagagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctc 108431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1901937 - 1901997
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  |||||||||||||| |||| |||  ||||||||||||||    
T  1901937 agtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctc 1901997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1911383 - 1911443
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  |||||||||||||| |||| |||  ||||||||||||||    
T  1911383 agtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctc 1911443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24537279 - 24537219
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| | || ||||| ||||||||||||||| ||||||||  ||||||||||||||    
T  24537279 agtatgagaaagaaggttgtcaaaaagttgtcacaaagtggatgtacaaatatcatttctc 24537219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26279944 - 26279884
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||||| || |||| |||  ||||||||||||||    
T  26279944 agtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 26279884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35272087 - 35272027
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||| |||||||||||| |||| |||||||||| |||| |||  ||||||||||||||    
T  35272087 agtatgaaagataaagttgtcaaaaggttgtcacaaagtggttgtacaaatatcatttctc 35272027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46473188 - 46473128
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||| |||||||||||||||| ||| |||| |||  ||||||||||||||    
T  46473188 agtatgagagagaaaattgttaaaaagttgtcgcaaagtggttgtacaaatatcatttctc 46473128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24482973 - 24483036
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||||  ||||||||||||||  |||||||  ||||||||||||||||    
T  24482973 agtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctcaa 24483036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 18169215 - 18169157
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| ||| |||| ||||||||||||||| |||| |||  ||||||||||||||    
T  18169215 tatgagagagaaatttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 18169157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32457766 - 32457828
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| | |||||||||| || |||| |||  ||||||||||||||||    
T  32457766 agtatgagagagaaagttgtcacaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 32457828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41309060 - 41308998
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| ||| |||||||||| ||||||||| |||| |||  ||||||||| ||||||    
T  41309060 agtatgagagagaaaattgttaaaaaattgtcacaaagtggttgtacaaatatcatatctcaa 41308998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 50294127 - 50294185
Alignment:
Q  5 tgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| ||||| |||||||||| ||| |||| |||  ||||||||||||||||    
T  50294127 tgagagataaaattgtttaaaagttgtcgcaaagtggttgtacaaatatcatttctcaa 50294185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 462412 - 462473
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  |||||||||||||||    
T  462412 agtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcatttctca 462473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11173518 - 11173449
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaacttaaaa 70  Q
    ||||||||| | |||||||| ||||||||||||||| |||| |||  |||||||| ||||| | ||||||    
T  11173518 agtatgagaaagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcaattctctagttaaaa 11173449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11327168 - 11327107
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  |||||||||||||||    
T  11327168 agtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctca 11327107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37303085 - 37303146
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  |||||||||||||||    
T  37303085 agtatgagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctca 37303146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48405471 - 48405410
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||||| ||||||||||||||  ||| |||  ||||||||||||||    
T  48405471 agtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50206980 - 50207041
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||||  ||||||||||||||  |||||||  ||||||||||||||    
T  50206980 agtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctc 50207041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54773764 - 54773825
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||||| |||||||||||| |  |||||||  ||||||||||||||    
T  54773764 agtatgagagagaaagttgttataaaagttgtcactaaatggatgttcaaatatcatttctc 54773825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6126514 - 6126454
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||||| || ||| ||||  | ||||||||||||    
T  6126514 agtatgagagagaaagttgtcaaaaagttgtcagaatgtgaatgtacatatatcatttctc 6126454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8066415 - 8066355
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||    
T  8066415 agtatgagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctc 8066355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9027933 - 9027873
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||| | |||||||| |||||| |||| |||  ||||||||||||||    
T  9027933 agtatgagagagaaagttatcaaaaagttatcacaaagtggttgtacaaatatcatttctc 9027873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20216008 - 20215948
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  |||| ||||||||| |||| |||  ||||||||||||||    
T  20216008 agtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctc 20215948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32008093 - 32008033
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | ||  ||| |||| ||||||||||||||    
T  32008093 agtatgagagagaaagttgtcaaaaagttgttagaaattggttgtgcaaatatcatttctc 32008033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32931929 - 32931989
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  ||||||||||||||    
T  32931929 agtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 32931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35425683 - 35425743
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| |||||||||| | || |||| |||  | ||||||||||||    
T  35425683 agtatgagagataaagttgtcaaaaagttgtaataaagtggttgtacatatatcatttctc 35425743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36819016 - 36818956
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  ||||||||||||||    
T  36819016 agtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 36818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41877622 - 41877682
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||| | |||||||| |||| |||  ||||||||||||||    
T  41877622 agtatgagagaaaaagttgtcaaaagggtgtcacaaagtggttgtacaaatatcatttctc 41877682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43176262 - 43176202
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| | ||| |||| |||| |||| |||  ||||||||||||||    
T  43176262 agtatgagagataaagttgtcataaaattgtaacaaagtggttgtacaaatatcatttctc 43176202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43900768 - 43900828
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||    
T  43900768 agtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 43900828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44334812 - 44334872
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||    
T  44334812 agtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 44334872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18449321 - 18449264
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcattt 58  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||    
T  18449321 agtatgagagagaaagttgttaaaaagttgtcacaaagtggatgtacaaatatcattt 18449264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12661958 - 12662020
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| ||||| ||||||||| ||||||||  ||||||||||||||||    
T  12661958 agtatgagagagaaagttgtcaaaaaattgtcacaaagtggatgtacaaatatcatttctcaa 12662020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12779617 - 12779679
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    |||||||||||||||||||| |||||||||||||||  ||| |||  ||||||||||||||||    
T  12779617 agtatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcaa 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34381072 - 34381010
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| ||||||||||||||| |||| |||  ||||||||||||||||    
T  34381072 agtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 34381010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39595332 - 39595271
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||| ||||||||||||||| |||| |||  |||||||||||||||    
T  39595332 agtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctca 39595271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 12718393 - 12718453
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    |||||||||||||||||| |||||||||||||||  ||| |||  ||||||||||||||||    
T  12718393 tatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcaa 12718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41173313 - 41173253
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttct 60  Q
    ||||||||||| |||||||||| ||||||||||||||  ||||||| ||||||||||||||    
T  41173313 agtatgagagagaaagttgttacaaaagttgtcacaaaatggatgtttaaatatcatttct 41173253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41460176 - 41460114
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||||||||||||| ||||||||||| ||  ||  ||| |||||||||||||||||    
T  41460176 agtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtataaatatcatttctcaa 41460114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 14323982 - 14324039
Alignment:
Q  4 atgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||| |||||||| || ||||||||||||  |||||||| ||||||||||||||    
T  14323982 atgagagagaaagttgtcaagaagttgtcacaaaatggatgtgcaaatatcatttctc 14324039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28904051 - 28903990
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||  |||||||||||||| |||| |||  |||||||||||||||    
T  28904051 agtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctca 28903990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28940446 - 28940385
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||  |||||||||||||| |||| |||  |||||||||||||||    
T  28940446 agtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctca 28940385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40223796 - 40223857
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||| ||||||||||||||| |||| |||  |||||| ||||||||    
T  40223796 agtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatataatttctca 40223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1774294 - 1774354
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| || |||||||||||| || |||||  ||||||||||||||    
T  1774294 agtatgagagagaaagttgtcaagaagttgtcacaaagtagatgtacaaatatcatttctc 1774354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3634554 - 3634494
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||| ||||||||| |||| |||| |||||| |||||||    
T  3634554 agtatgagagagaaagttgtaaaaaaattgtcacaaagtggttgtgcaaatataatttctc 3634494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11768001 - 11768061
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||  |||||||| || |||||||||||| ||||||||  ||||||||||||||    
T  11768001 agtatgagagggaaagttgtcaagaagttgtcacaaagtggatgtacaaatatcatttctc 11768061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23991145 - 23991205
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| |  |||||||||||| |||| |||  ||||||||||||||    
T  23991145 agtatgagagataaagttgtcaggaagttgtcacaaagtggttgtacaaatatcatttctc 23991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26660422 - 26660482
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| || ||||||||||||  |||||||  ||||||||||||||    
T  26660422 agtatgagagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctc 26660482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26932014 - 26932074
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| || ||||||||||||  |||||||  ||||||||||||||    
T  26932014 agtatgagagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctc 26932074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36713189 - 36713249
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| || |||||||||||| |||| |||  ||||||||||||||    
T  36713189 agtatgagagagaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctc 36713249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31025016 - 31025075
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttct 60  Q
    ||||||||||| |||||||||||||| |||||| || |||| |||  |||||||||||||    
T  31025016 agtatgagagagaaagttgttaaaaaattgtcataatgtggttgtacaaatatcatttct 31025075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9599739 - 9599801
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  ||||||||||||||||    
T  9599739 agtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctcaa 9599801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8920139 - 8920078
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| | ||||||||||||||  |||||||  ||||||||||||||    
T  8920139 agtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctc 8920078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9594538 - 9594469
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaacttaaaa 70  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  |||||||||||||| ||| ||||    
T  9594538 agtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctctactgaaaa 9594469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17063925 - 17063864
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||||||||||||| ||||||||||| ||  ||  |||  |||||||||||||||    
T  17063925 agtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtacaaatatcatttctca 17063864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19127184 - 19127123
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| | |||||| || |||||||||||| |||| |||  |||||||||||||||    
T  19127184 agtatgagagagagagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctca 19127123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30574388 - 30574449
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  |||||||||||||||    
T  30574388 agtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctca 30574449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9714147 - 9714207
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||| ||||||||||||||||| || |||| |||  | ||||||||||||    
T  9714147 agtatgagagagaaaattgttaaaaagttgtcataaagtggttgtacatatatcatttctc 9714207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18638836 - 18638896
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||||||| |||| |||||||||| | ||  ||| |||| ||||||||||||||    
T  18638836 agtatgagagataaatttgtcaaaaagttgtaataaaatggttgtgcaaatatcatttctc 18638896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19376143 - 19376203
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||| | |||||||||||| || |||| |||  ||||||||||||||    
T  19376143 agtatgagagagaaagttatcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 19376203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20591485 - 20591545
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||| |||||| || ||||||||  | ||||||||||||    
T  20591485 agtatgagagagaaagttgtcaaaaaattgtcaaaaagtggatgtacatatatcatttctc 20591545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25364848 - 25364907
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||| |||||| ||||| ||||||||||||||| |||| |||  ||||||||||||||    
T  25364848 agtatgaaagataatgttgtcaaaaagttgtcacaa-gtggttgtacaaatatcatttctc 25364907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11698 - 11637
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||||||||||||||| || ||||||||  | |||||||||||||    
T  11698 agtatgagagagaaagttgttaaaaagttgtcaaaaagtggatgtagatatatcatttctca 11637  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 113685 - 113624
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||||| |||| |||||||||||||||||||||||| |||| |||  |||||||||||||||    
T  113685 agtatgtgagagaaagttgttaaaaagttgtcacaaagtggttgtacaaatatcatttctca 113624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18792443 - 18792504
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||||||||||||||| || ||||||||  | |||||||||||||    
T  18792443 agtatgagagagaaagttgttaaaaagttgtcaaaaagtggatgtagatatatcatttctca 18792504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6435096 - 6435037
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttct 60  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||  |||||||||||||    
T  6435096 agtatgagagataaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttct 6435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9954608 - 9954539
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaacttaaaa 70  Q
    ||||||||||| |||||||| |||||||||||||||  ||| |||  |||||||||||||| ||| ||||    
T  9954608 agtatgagagagaaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctctactgaaaa 9954539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29383617 - 29383557
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||||| || |||| |||  ||||||||||||||    
T  29383617 agtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 29383557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30906674 - 30906734
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| |||||||||||| ||  || ||||  ||||||||||||||    
T  30906674 agtatgagagataaagttgtcaaaaagttgtcataaaatgaatgtagaaatatcatttctc 30906734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 29376728 - 29376787
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||| ||| ||||||||||||||||||||||||  ||| |||  |||||||||||||||    
T  29376728 tatgatagagaaagttgttaaaaagttgtcacaaaatggttgtaaaaatatcatttctca 29376787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8395402 - 8395340
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||||    
T  8395402 agtatgagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctcaa 8395340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35213571 - 35213633
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||||| ||||||||||||||  | |||||  |||||||||||||||    
T  35213571 agtatgagagagaaagttgttacaaaagttgtcacaaaatagatgttcaaatatcatttctca 35213633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5327602 - 5327663
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||||| |||||||||||| |  |||||||  ||||||||||||||    
T  5327602 agtatgagagagaaagttgttataaaagttgtcactaaatggatgttcaaatatcatttctc 5327663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32457263 - 32457324
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||||| |||| ||| |||| ||||||||||||||| |||| |||  |||||||||||||||    
T  32457263 agtatgtgagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctca 32457324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 237409 - 237469
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||  ||||||| ||| |||  ||||||||||||||    
T  237409 agtatgagagagaaagttgtcaaaaagtaatcacaagatggttgtacaaatatcatttctc 237469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3339510 - 3339570
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  ||||||||||||||    
T  3339510 agtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15666784 - 15666844
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||| || ||||||||||||||||||||| ||  ||| |||  ||||||||||||||    
T  15666784 agtatgagtgagaaagttgttaaaaagttgtcagaaaatggttgtacaaatatcatttctc 15666844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28965851 - 28965911
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| ||||  ||| |||  ||||||||||||||    
T  28965851 agtatgagagagaaagttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctc 28965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30796086 - 30796146
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||| ||| |||||||| ||||| ||||||||| |||| |||  ||||||||||||||    
T  30796086 agtatgaaagagaaagttgtaaaaaaattgtcacaaagtggttgtacaaatatcatttctc 30796146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13437258 - 13437198
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||| ||||||||||||||  ||| |||| ||||||||||||||    
T  13437258 agtatgagagaaaaagttgttcaaaagttgtcacaaaatggttgtgcaaatatcatttctc 13437198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28110017 - 28109955
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    |||||| |||||||||||||| ||||||||||| || |||| |||  ||||||||||||||||    
T  28110017 agtatgtgagataaagttgtttaaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 28109955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40842465 - 40842403
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| ||||  ||||||||| ||||||||  ||||||||||||||||    
T  40842465 agtatgagagagaaagttgtcaaaagattgtcacaaagtggatgtacaaatatcatttctcaa 40842403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 155992 - 156053
Alignment:
Q  1 agtatgagagataaagttgt-taaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||| |||||||||||| ||||||||  ||||||||||||||    
T  155992 agtatgagagagaaagttgtctaagaagttgtcacaaagtggatgtacaaatatcatttctc 156053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37899384 - 37899323
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| | ||||||||||||||  |||||||  ||||||||||||||    
T  37899384 agtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctc 37899323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40717247 - 40717308
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||  || ||||||||||||    
T  40717247 agtatgagaaataaagttattaaaaagttgtcataaagtggatgtacaagtatcatttctca 40717308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48866941 - 48867002
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||||| |||| |||||||| ||||||||||||||| |||| |||  |||||||||||||||    
T  48866941 agtatgtgagagaaagttgtcaaaaagttgtcacaaagtggctgtacaaatatcatttctca 48867002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19426640 - 19426580
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||||||||  ||| |||  ||||||||||||||    
T  19426640 agtatgagagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20406601 - 20406541
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| | |||||||| |||||||||||||||| ||| |||  ||||||||||||||    
T  20406601 agtatgagaaagaaagttgtcaaaaagttgtcacaagatggttgtacaaatatcatttctc 20406541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37392103 - 37392043
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||||||||||||| ||||||||||| ||  ||| |||  ||||||||||||||    
T  37392103 agtatgagagataaagttgtttaaaagttgtcaaaaaatggttgtacaaatatcatttctc 37392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45607084 - 45607024
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| || |||||||||||| || |||||  ||||||||||||||    
T  45607084 agtatgagagagaaagttgtcaagaagttgtcacaaagtagatgtacaaatatcatttctc 45607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 28824561 - 28824503
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| |||||||| |||||||||||| || |||| |||  ||||||||||||||    
T  28824561 tatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 28824503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5724098 - 5724037
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||||||||||||| | || |||| |||  |||||||||| ||||    
T  5724098 agtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcattcctca 5724037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17500757 - 17500696
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||||||||||||||||||| |||||||| | | || |||| |||  |||||||||||||||    
T  17500757 agtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttctca 17500696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17552457 - 17552518
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    |||||||||||||||||||| |||||||| | | || |||| |||  |||||||||||||||    
T  17552457 agtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttctca 17552518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 28596961 - 28596908
Alignment:
Q  6 gagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttc 59  Q
    |||||| |||||||| ||||||||||||||| |||| |||  ||||||||||||    
T  28596961 gagagagaaagttgtaaaaaagttgtcacaaagtggttgtacaaatatcatttc 28596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33050243 - 33050182
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  |||||||||||||||    
T  33050243 agtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctca 33050182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2414137 - 2414077
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| |||||||||| ||||| ||||||| | || | ||| |||||||||||||||    
T  2414137 agtatgagatataaagttgtcaaaaaattgtcacgaagtagttgtataaatatcatttctc 2414077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4971350 - 4971290
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  ||||||||||||||    
T  4971350 agtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10591215 - 10591155
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||| | |||||||||||| |||| |||  |||||||| |||||    
T  10591215 agtatgagagacaaagttgtttagaagttgtcacaaagtggttgtacaaatatcaattctc 10591155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17945128 - 17945068
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| | | |||||||||||  ||| |||  ||||||||||||||    
T  17945128 agtatgagagataaagttgtcacatagttgtcacaaaatggttgtcaaaatatcatttctc 17945068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21752718 - 21752658
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| |||||||||| | || |||  |||  ||||||||||||||    
T  21752718 agtatgagagataaagttgtcaaaaagttgtgagaaagtgattgtacaaatatcatttctc 21752658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24267658 - 24267718
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||| || ||||||||  | ||||||||||||    
T  24267658 agtatgagagagaaagttgtctaaaagttgtcaaaaagtggatgtacatatatcatttctc 24267718  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30864428 - 30864488
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| |||  ||||||||||||||    
T  30864428 agtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 30864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33212102 - 33212034
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaacttaaa 69  Q
    |||||||||||||||||||| ||||| |||| | ||  ||| |||  |||||||||||||||| |||||    
T  33212102 agtatgagagataaagttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctcaatttaaa 33212034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33684740 - 33684680
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||    
T  33684740 agtatgagagagaaagttgtaaaaaagttgtgagaaagtggttgtacaaatatcatttctc 33684680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11229332 - 11229392
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| || |||||||||||| ||||||||  ||||||||||||||    
T  11229332 agtatgagagagaaagttgtcaagaagttgtcacaaagtggatgtacaaatatcatttctc 11229392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36435741 - 36435681
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||| |||| |||||||||||||||||||||||| |||| |||  ||||||||||||||    
T  36435741 agtatgtgagagaaagttgttaaaaagttgtcacaaagtggttgtacaaatatcatttctc 36435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30856867 - 30856806
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||  |||||||||||||| |||| |||  |||||||||||||||    
T  30856867 agtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctca 30856806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 546396 - 546456
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||||||||||||| | || |||| |||  ||||||||||||||    
T  546396 agtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatttctc 546456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5455464 - 5455524
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||| ||||| |||||||| |||| |||||||||| ||||||||  ||||||||||||||    
T  5455464 agtataagagagaaagttgtcaaaaggttgtcacaaagtggatgtacaaatatcatttctc 5455524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31296856 - 31296916
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| |||| ||||||||||  ||| |||  ||||||||||||||    
T  31296856 agtatgagagataaagttgtcaaaacgttgtcacaaaatggttgtacaaatatcatttctc 31296916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36133034 - 36132974
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| | ||| ||||||||| |||| |||  ||||||||||||||    
T  36133034 agtatgagagataaagttgtcacaaaattgtcacaaagtggttgtacaaatatcatttctc 36132974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 14954612 - 14954670
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| ||||||||| ||||||||||||||  || ||||  ||||||||||||||    
T  14954612 tatgagagagaaagttgttcaaaagttgtcacaaaatgtatgtacaaatatcatttctc 14954670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32688555 - 32688617
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| ||||| |||||| || |||| |||  ||||||||||||||||    
T  32688555 agtatgagagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctcaa 32688617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 5067660 - 5067717
Alignment:
Q  4 atgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||| |||||| | ||||||||||||||| || |||||  ||||||||||||||    
T  5067660 atgagagagaaagttatcaaaaagttgtcacaaagtagatgtacaaatatcatttctc 5067717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30977950 - 30977889
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| | ||||||||||||||  |||||||  ||||||||||||||    
T  30977950 agtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcatttctc 30977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1889207 - 1889147
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||| |||||| || |||| |||  ||||||||||||||    
T  1889207 agtatgagagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctc 1889147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2308333 - 2308393
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| |||| ||||||| ||  ||| |||  ||||||||||||||    
T  2308333 agtatgagagataaagttgtcaaaaggttgtcaaaaattggttgtacaaatatcatttctc 2308393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4738583 - 4738643
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||| |||  ||||||| ||||||||||||||| |||| |||  ||||||||||||||    
T  4738583 agtatgatagaggaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 4738643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15283261 - 15283321
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  |||| ||||||||| |||| |||  ||||||||||||||    
T  15283261 agtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctc 15283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30413737 - 30413797
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| ||||||||||  |||  ||| |||  ||||||||||||||    
T  30413737 agtatgagagataaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 30413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33296082 - 33296142
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||| |||  ||||||| ||||||||||||||| |||| |||  ||||||||||||||    
T  33296082 agtatgatagaggaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 33296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34139049 - 34139109
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||||||| |||| ||||| || |||||| || |||||  ||||||||||||||    
T  34139049 agtatgagagataaaattgtcaaaaaattatcacaaagtagatgtacaaatatcatttctc 34139109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42554836 - 42554776
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  ||||||||||||||    
T  42554836 agtatgagagagaaagttgtaaaaaagttgtaataaagtggttgtacaaatatcatttctc 42554776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11097895 - 11097955
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||  ||||||||||||||    
T  11097895 agtatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctc 11097955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50226890 - 50226950
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||||||||||||| |||| |||  ||||||||||||||    
T  50226890 agtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 50226950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20288350 - 20288413
Alignment:
Q  1 agtatgagagataaagttgt-taaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| |||||||| ||||||||||||||||  |||||||  ||||||||||||||||    
T  20288350 agtatgagagagaaagttgtctaaaaagttgtcacaaattggatgtacaaatatcatttctcaa 20288413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32821695 - 32821633
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| ||| ||||| |||||||||||||| |||| |||  ||||||||||||||||    
T  32821695 agtatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 32821633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16658498 - 16658437
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||  |||||||||||||| |||| |||  |||||||||||||||    
T  16658498 agtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctca 16658437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30530410 - 30530471
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||||||||||||||||||| | || |||| |||  |||||||||||||||    
T  30530410 agtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatttctca 30530471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 31184338 - 31184281
Alignment:
Q  4 atgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||||||||||||| ||  ||| |||  ||||||||||||||    
T  31184338 atgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcatttctc 31184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50328151 - 50328212
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||| ||| |||||||||  |||||||||||||| |||||||| |||||||||||||||    
T  50328151 agtatgaaagagaaagttgttgcaaaagttgtcacaaagtggatgtttaaatatcatttctc 50328212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 366717 - 366657
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||| ||| || |||| ||| |||||||||||||||    
T  366717 agtatgagagagaaagttgtcaaaaagttatcagaaagtggttgtataaatatcatttctc 366657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7078511 - 7078571
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||| ||||||||||||||  | |||||  ||||||||||||||    
T  7078511 agtatgagagagaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcatttctc 7078571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30530585 - 30530645
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| ||||||||  ||||||||||||||  ||| ||| |||||||||||||||    
T  30530585 agtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttctc 30530645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35846330 - 35846390
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| | |||||| ||||||||||||||||| |||||| |  ||||||||||||||    
T  35846330 agtatgagaaagaaagttattaaaaagttgtcacaaagtggatatacaaatatcatttctc 35846390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49425797 - 49425738
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| |||| |||||||||| |||| |||  ||||||||||||||    
T  49425797 agtatgagagataaagttgtcaaaa-gttgtcacaaagtggttgtacaaatatcatttctc 49425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22389536 - 22389578
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggat 43  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||    
T  22389536 agtatgaaagagaaagttgttaaaaagttgtcacaaagtggat 22389578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36577422 - 36577484
Alignment:
Q  1 agtatgagagataaagttgtta-aaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||||  ||||||||||||||  |||||||  |||||||||||||||    
T  36577422 agtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctca 36577484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 50118909 - 50118967
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||| |||||||||| | || |||| | | |||||||||||||||    
T  50118909 tatgagagataaagttgtcaaaaagttgtaataaagtggttatataaatatcatttctc 50118967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15061905 - 15061844
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| ||| |||| ||||||||||||||| |||| | |  |||||||||||||||    
T  15061905 agtatgagagagaaaattgtcaaaaagttgtcacaaagtggttatacaaatatcatttctca 15061844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 18954313 - 18954346
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaa 36  Q
    |||||||||||||||||||||||| |||||||||    
T  18954313 tatgagagataaagttgttaaaaaattgtcacaa 18954346  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24611904 - 24611843
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||| |||||||||| | || ||||||||  | |||||||||||||    
T  24611904 agtatgagagagaaagttgtcaaaaagttgttaaaaagtggatgtacatatatcatttctca 24611843  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34002331 - 34002392
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||| ||||| ||||||||||||||||||| | || |||| |||  |||||||||||||||    
T  34002331 agtatcagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatttctca 34002392  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39010874 - 39010813
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| |||||||| |||||||||| | || |||| |||  |||||||||||||||    
T  39010874 agtatgagagagaaagttgtcaaaaagttgtgagaaagtggctgtacaaatatcatttctca 39010813  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1615096 - 1615036
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||| | ||||||||||||||||||| | || |||| |||  ||||||||||||||    
T  1615096 agtatgagaaagaaagttgttaaaaagttgtgagaaagtggttgtacaaatatcatttctc 1615036  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18610833 - 18610773
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| |||||||||||||||  | | |||  ||||||||||||||    
T  18610833 agtatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctc 18610773  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25302654 - 25302714
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||| || |||||| |||||| |||||||||| |||| |||  ||||||||||||||    
T  25302654 agtatgagtgagaaagttattaaaaggttgtcacaaagtggttgtacaaatatcatttctc 25302714  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 28703140 - 28703196
Alignment:
Q  5 tgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||| ||||||||||||||||||||| ||  ||| ||| ||||||| |||||||    
T  28703140 tgagagagaaagttgttaaaaagttgtcataaattggttgtataaatataatttctc 28703196  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30439310 - 30439250
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||||||||||||||| ||||| |||||| ||  ||| |||  ||||||||||||||    
T  30439310 agtatgagagataaagttgtcaaaaaattgtcataaattggttgtacaaatatcatttctc 30439250  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33675960 - 33675900
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||||| |||||||||| || |||| |||  |||| |||||||||    
T  33675960 agtatgagagagaaagttgttacaaagttgtcaaaaagtggttgtacaaatgtcatttctc 33675900  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 45470853 - 45470913
Alignment:
Q  3 tatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||| |||||||| ||||| |||| | ||||||| |||  ||||||||||||||||    
T  45470853 tatgagagagaaagttgtcaaaaaattgtaataaggtggttgtacaaatatcatttctcaa 45470913  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 48872962 - 48873021
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||| | |||| |||||||||| |||| ||| |||||||||||||||    
T  48872962 agtatgagagagaaagttctcaaaa-gttgtcacaaagtggttgtataaatatcatttctc 48873021  T

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Target: scaffold0508 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11547 - 11609
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||||||||| ||| |||| || |||||||||||| || |||||  ||||||||||||||||    
T  11547 agtatgagagagaaaattgtcaagaagttgtcacaaagtagatgtacaaatatcatttctcaa 11609  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6487 - 6426
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctca 62  Q
    ||||||||||| || ||||| |||||||||||| ||  |||||||  |||||||||||||||    
T  6487 agtatgagagagaatgttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctca 6426  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27399 - 27339
Alignment:
Q  1 agtatgagagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    ||||||||||| |||||||| ||||| |||||||||  |||||||  | ||||||||||||    
T  27399 agtatgagagagaaagttgtcaaaaaattgtcacaaaatggatgtacatatatcatttctc 27339  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 36883 - 36939
Alignment:
Q  7 agagataaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctcaa 63  Q
    ||||| |||||||| |||||||||| | || |||| |||| ||||||||||||||||    
T  36883 agagagaaagttgtcaaaaagttgtaataaagtggttgtgcaaatatcatttctcaa 36939  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 219687 - 219735
Alignment:
Q  13 aaagttgttaaaaagttgtcacaaggtggatgtgtaaatatcatttctc 61  Q
    |||||||| ||||||||||||||| |||| |||  ||||||||||||||    
T  219687 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 219735  T

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