View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1459_high_56 (Length: 394)

Name: NF1459_high_56
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1459_high_56
NF1459_high_56
[»] chr1 (18 HSPs)
chr1 (1-381)||(51012857-51013246)
chr1 (45-126)||(2219972-2220053)
chr1 (44-125)||(36371469-36371550)
chr1 (45-135)||(19528313-19528403)
chr1 (44-125)||(11063555-11063636)
chr1 (87-150)||(12587312-12587376)
chr1 (42-129)||(51814491-51814578)
chr1 (55-125)||(17745252-17745322)
chr1 (55-125)||(21547476-21547546)
chr1 (43-150)||(25297770-25297879)
chr1 (55-125)||(33700769-33700839)
chr1 (44-125)||(4566547-4566628)
chr1 (44-109)||(40257398-40257463)
chr1 (40-109)||(41508826-41508895)
chr1 (45-129)||(1094525-1094609)
chr1 (45-129)||(18037605-18037689)
chr1 (45-109)||(27567134-27567198)
chr1 (45-125)||(51703779-51703859)
[»] chr6 (5 HSPs)
chr6 (43-125)||(33549102-33549184)
chr6 (45-150)||(30127400-30127507)
chr6 (44-126)||(12234502-12234584)
chr6 (44-109)||(31623003-31623068)
chr6 (55-124)||(12216754-12216823)
[»] chr5 (12 HSPs)
chr5 (44-125)||(34984805-34984886)
chr5 (56-125)||(16773818-16773887)
chr5 (45-125)||(25627057-25627137)
chr5 (50-124)||(1410657-1410730)
chr5 (45-125)||(7918465-7918545)
chr5 (45-127)||(14495799-14495881)
chr5 (73-127)||(35982716-35982770)
chr5 (72-125)||(14285188-14285241)
chr5 (44-109)||(30883210-30883275)
chr5 (45-105)||(8278291-8278351)
chr5 (45-109)||(16457810-16457874)
chr5 (74-126)||(39327085-39327137)
[»] scaffold0258 (1 HSPs)
scaffold0258 (45-125)||(15319-15399)
[»] chr2 (14 HSPs)
chr2 (44-130)||(37480074-37480160)
chr2 (55-129)||(21213779-21213853)
chr2 (45-123)||(23052521-23052599)
chr2 (44-129)||(42602553-42602638)
chr2 (42-126)||(7799030-7799114)
chr2 (45-129)||(42327387-42327471)
chr2 (44-123)||(39714991-39715070)
chr2 (88-149)||(4262273-4262335)
chr2 (47-129)||(12086121-12086203)
chr2 (44-125)||(1729815-1729896)
chr2 (44-125)||(19322767-19322848)
chr2 (45-125)||(42922414-42922495)
chr2 (45-109)||(19016031-19016095)
chr2 (45-125)||(19244109-19244189)
[»] chr3 (16 HSPs)
chr3 (44-125)||(36720380-36720461)
chr3 (45-125)||(21960551-21960631)
chr3 (43-126)||(31520600-31520683)
chr3 (43-126)||(32638943-32639026)
chr3 (55-129)||(4844503-4844577)
chr3 (55-129)||(4870199-4870273)
chr3 (43-125)||(27093357-27093439)
chr3 (46-123)||(18316497-18316573)
chr3 (45-125)||(16354888-16354968)
chr3 (63-127)||(26481945-26482009)
chr3 (45-99)||(27923065-27923119)
chr3 (55-125)||(53412955-53413025)
chr3 (72-125)||(10445135-10445188)
chr3 (43-127)||(10499103-10499187)
chr3 (45-129)||(14186648-14186731)
chr3 (45-129)||(47810736-47810820)
[»] chr8 (12 HSPs)
chr8 (55-150)||(3624590-3624686)
chr8 (56-127)||(968373-968444)
chr8 (44-123)||(16852339-16852418)
chr8 (44-123)||(19703485-19703564)
chr8 (44-129)||(8484998-8485083)
chr8 (44-124)||(3058046-3058126)
chr8 (44-126)||(35641896-35641978)
chr8 (44-109)||(5264543-5264608)
chr8 (55-127)||(12281504-12281576)
chr8 (52-128)||(18546355-18546431)
chr8 (87-127)||(22193358-22193398)
chr8 (57-121)||(29858049-29858113)
[»] chr4 (15 HSPs)
chr4 (45-129)||(19238569-19238653)
chr4 (45-129)||(46295097-46295181)
chr4 (45-101)||(56236935-56236991)
chr4 (55-125)||(7292794-7292864)
chr4 (48-126)||(49576889-49576967)
chr4 (45-125)||(28635696-28635776)
chr4 (45-125)||(37109347-37109427)
chr4 (45-150)||(39509070-39509177)
chr4 (45-109)||(47230516-47230580)
chr4 (45-123)||(55427198-55427276)
chr4 (60-125)||(11592149-11592214)
chr4 (45-122)||(13496241-13496318)
chr4 (72-125)||(37274455-37274508)
chr4 (55-127)||(2185026-2185098)
chr4 (65-150)||(13015447-13015534)
[»] chr7 (15 HSPs)
chr7 (44-129)||(2446307-2446392)
chr7 (56-126)||(14058264-14058334)
chr7 (56-126)||(14368292-14368362)
chr7 (45-123)||(20335829-20335907)
chr7 (45-123)||(22760863-22760941)
chr7 (43-125)||(43215182-43215264)
chr7 (44-129)||(38374591-38374676)
chr7 (45-129)||(5273582-5273666)
chr7 (45-125)||(26459406-26459486)
chr7 (72-123)||(7499922-7499973)
chr7 (44-127)||(45709702-45709785)
chr7 (55-125)||(2962469-2962539)
chr7 (66-128)||(5668564-5668626)
chr7 (55-129)||(19553464-19553537)
chr7 (45-123)||(43590907-43590985)
[»] scaffold0032 (1 HSPs)
scaffold0032 (45-129)||(112282-112366)
[»] scaffold0008 (1 HSPs)
scaffold0008 (67-129)||(49328-49390)
[»] scaffold0299 (1 HSPs)
scaffold0299 (62-125)||(11545-11608)
[»] scaffold0180 (1 HSPs)
scaffold0180 (56-125)||(19958-20027)


Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 51013246 - 51012857
Alignment:
Q  1 ttcaattttctaggtgtagataattaattatatttaggagttaaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| ||||| ||||||| ||||||    
T  51013246 ttcaattttctaggtgtagataattaattatatttaggagttaaaacccattttggttggcctggtggtactggcttgggacatgggagtgtgatcctct 51013147  T
Q  101 tcgaggtcttcggttcgattctctccgg--tcaatttagctcggttaatttatctaaaaaacttatattaccggtttgaaaatggattagaattctcacc 198  Q
    ||||||||||||||  ||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51013146 tcgaggtcttcggtcagattctctccggtatcaatttagctaggttaatttatctaaaaaaattatattaccggtttgaaaatggattagaattctcacc 51013047  T
Q  199 cctttatcattcatgaaa------aagagtgatgatgcccatttttcaattctcaccccattgtttgtttagtttatc-nnnnnnnnnnnnnnnncaggg 291  Q
    ||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||| |||||||                 |||||    
T  51013046 cctttatcattcatgaaaaggaagaagagtgatgatgcccatttttcaattctcaccccattgtttgttttgtttatctttttttttttttttttcaggg 51012947  T
Q  292 agtttgtttcaccacctccacttcatttgccttgaaaaaataattaattaaacggtaaatttctaagttattgtttgtttgtatatccct 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51012946 agtttgtttcaccacctccacttcatttgccttgaaaaaataattaattaaacggtaaatttctaagttattgtttatttgtatatccct 51012857  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 2219972 - 2220053
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    |||||| || ||||| |||||||||| ||||||||||| ||| |||||||| ||| |||||||||  |||||||||||||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctcc 2220053  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 36371469 - 36371550
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||| || |||||| || |||||| ||||||||||| || ||||||||||||| || ||||||  ||||||||||||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctc 36371550  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 19528403 - 19528313
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggtcaattt 135  Q
    |||||| || |||||| ||||||||| |||||||| |  |  ||||||||||||| || ||||||  |||||||||||| |||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctccccggtcaattt 19528313  T

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Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 11063555 - 11063636
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||| || ||||| ||| |||||| |||||||| || ||| |||||| ||||| || ||||||| ||||||||||||||    
T  11063555 aaacccatttgggttgatctagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctc 11063636  T

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Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 12587312 - 12587376
Alignment:
Q  87 gagtgtgctcctcttcgaggtcttcggttcgattctctccggt-caatttagctcggttaattta 150  Q
    ||||||||||||| |||||||||  |||||||||||||||||| |||||||| | || |||||||    
T  12587312 gagtgtgctcctcctcgaggtctcaggttcgattctctccggtgcaatttaggtgggctaattta 12587376  T

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Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 51814491 - 51814578
Alignment:
Q  42 taaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    ||||||||| || |||||| ||| ||||| || ||||  |  |||||||||||||||| || ||||||  ||||||||||||||||||    
T  51814491 taaaacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggt 51814578  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 17745322 - 17745252
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| |||||||| || |||| ||||||||||| |||||||||   |||||||||||||    
T  17745322 ggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctc 17745252  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 21547546 - 21547476
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| |||||||| ||||| ||| ||||||||| ||||||| |  ||||||||||||||    
T  21547546 ggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctc 21547476  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 25297770 - 25297879
Alignment:
Q  43 aaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg--gtcaatttagctc 140  Q
    |||||||| || ||||||||| |||||| || ||| | |  |||||||||||||||| |||||||||  |||| ||||||| |||  |||||||||| |     
T  25297770 aaaacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgattctcaccggcgtcaatttaggtg 25297869  T
Q  141 ggttaattta 150  Q
    || |||||||    
T  25297870 ggataattta 25297879  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 33700839 - 33700769
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| ||||||||||  || ||||||||||||| || ||||||  ||||||||||||||    
T  33700839 ggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 33700769  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 4566547 - 4566628
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||| || |||||| || ||| || ||||||||||| || ||||||||||||| ||  |||||  ||||||||||||||    
T  4566547 aaacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctc 4566628  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 40257398 - 40257463
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    ||||||| || |||||| ||||||||| |||||||  || || ||||||||||||| |||||||||    
T  40257398 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtct 40257463  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 41508826 - 41508895
Alignment:
Q  40 gttaaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    ||||||||||| || |||||| ||||||||||||| |||| |  || ||||||||||||| || ||||||    
T  41508826 gttaaaacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtct 41508895  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 1094525 - 1094609
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| || ||||||| || ||||| || |||||||| || |||||||||||||  ||||||||    ||||||||||||||||    
T  1094525 aacccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggt 1094609  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 18037689 - 18037605
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| || |||||||||| || || ||| |||| || || |||||||||||| |||||| |||   |||||||||||||||||    
T  18037689 aacccacttgggttggtctgatgatattggtttgggacttgggagtgtgctccttttcgagatctcaagttcgattctctccggt 18037605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 27567198 - 27567134
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    |||||| || |||||||| | || || || |||||||| ||||||||||||||||||| ||||||    
T  27567198 aacccacttgggttggtcggatgatattgacttggaacctgagagtgtgctcctcttcaaggtct 27567134  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 51703779 - 51703859
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || ||||||||| |||||| ||||||||||  || ||||||||||||| || | || |  ||||||||||||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctc 51703859  T

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Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 33549102 - 33549184
Alignment:
Q  43 aaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||||| || |||||||||||||||| |||||||| || || ||||||||||||| |||||||||  ||||||||||||||    
T  33549102 aaaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 30127400 - 30127507
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt--caatttagctcgg 142  Q
    |||||| || |||||||||||||||| ||||||||    || |||||||||||||||||||||||  ||||||||||| ||||||  |||||||| | ||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttaggtagg 30127499  T
Q  143 ttaattta 150  Q
    ||||||||    
T  30127500 ttaattta 30127507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 12234584 - 12234502
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    ||||||| ||||||||| ||||||||| || ||||| || || |||||||||||   |||||||||  |||||||||||||||    
T  12234584 aaacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctcc 12234502  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 31623068 - 31623003
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    ||||||| || |||||||| ||||||| |||||||| || || ||||||||||||| |||||||||    
T  31623068 aaacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtct 31623003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 12216754 - 12216823
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctct 124  Q
    |||||||||||||||| ||| |||| || || || |||||||||  |||||||||  |||||||||||||    
T  12216754 ggttggtctggtggtattggtttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattctct 12216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 34984805 - 34984886
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||| || ||||||||| |||||| ||||||||||| || ||||||||||||| || ||||||| ||||||||||||||    
T  34984805 aaacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 34984886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 16773818 - 16773887
Alignment:
Q  56 gttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||||||||||| || ||||| || || ||||||||||||| |||||||||  ||||||||||||||    
T  16773818 gttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 16773887  T

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Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 25627057 - 25627137
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| || |||||| ||||||||||| || ||||||||||||| || ||||||  ||||||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 25627137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 1410730 - 1410657
Alignment:
Q  50 aattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctct 124  Q
    |||| |||||||||||||||| || ||||| | ||| ||||||||||||| |||||||| || ||||||||||||    
T  1410730 aattgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtc-tcagttcgattctct 1410657  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 7918545 - 7918465
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| || |||||| ||||||||||| || |||||  |||||| || ||||||| ||||||||||||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctc 7918465  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 14495881 - 14495799
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    |||||| || |||||||||||||||| || ||||| |  || ||||||||||||| |||||||||  | || |||||||||||    
T  14495881 aacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccg 14495799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 35982716 - 35982770
Alignment:
Q  73 ggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    ||||||| |||||||||||||||||||| ||| ||||  ||||||||||| ||||    
T  35982716 ggcttgggacatgagagtgtgctcctctacgatgtctcaggttcgattctatccg 35982770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 14285188 - 14285241
Alignment:
Q  72 tggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||||||| || ||||||||||||| || ||||||  ||||||||||||||    
T  14285188 tggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 14285241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 30883275 - 30883210
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    ||||||| || ||||||||| |||||| |||||||| || || ||||||||||||| || ||||||    
T  30883275 aaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 30883210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 8278351 - 8278291
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgag 105  Q
    |||||| || |||||||||| ||||| |||||||| || || ||||||||||||| |||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgag 8278291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 16457810 - 16457874
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    |||||| ||||||||| ||||||||| |||||||| || |  ||||||||||||| || ||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtct 16457874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 39327137 - 39327085
Alignment:
Q  74 gcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    |||||| ||||| ||||||||||||| || ||||||| | |||||||||||||    
T  39327137 gcttgggacatgggagtgtgctcctcctcaaggtcttagcttcgattctctcc 39327085  T

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Target: scaffold0258 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 15399 - 15319
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||||||||||||| |||||||| || || ||||||||||||| |||||||||  ||||||||||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 37480074 - 37480160
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggtc 130  Q
    ||||||| || |||||| ||||||||| |||||||| || |||||||||||||||| || ||||||  |||||||||||| ||||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtc 37480160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 21213779 - 21213853
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||||||||||||| |||||||| || || ||||||| ||||| | |||||||  |||||||||||| |||||    
T  21213779 ggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggt 21213853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 23052599 - 23052521
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    |||||| ||||||||| ||||||||| |||||||| || || ||||||||| ||| || ||||||  ||||||||||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctc 23052521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 42602553 - 42602638
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    ||||||| || |||||| || |||||| |||||||| || || ||||||||||||  || ||||||| |||| |||||||||||||    
T  42602553 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggt 42602638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 7799114 - 7799030
Alignment:
Q  42 taaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    ||||||||| || |||||  ||||||||| |||||||| || || ||||||||||||| ||||| |||  | |||||||||||||    
T  7799114 taaaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctcc 7799030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 42327471 - 42327387
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| || |||||| || |||||| |||||||| || || ||||||||||||| || ||||||  ||||||||||||| ||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggt 42327387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 39714991 - 39715070
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    ||||||| || ||||||  |||||||| || ||||| || || ||||||||||||| |||||||||  ||||||||||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 4262335 - 4262273
Alignment:
Q  88 agtgtgctcctcttcgaggtcttcggttcgattctctcc-ggtcaatttagctcggttaattt 149  Q
    |||||||||||| || ||||||  ||||||||||||||| ||||||||||| | |||||||||    
T  4262335 agtgtgctcctcctcaaggtctcaggttcgattctctccgggtcaatttaggtaggttaattt 4262273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 12086203 - 12086121
Alignment:
Q  47 cccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||| ||| ||||| ||||||||| |||||||| || ||  |||||||||||| || ||||||  |||||||||| |||||||    
T  12086203 cccacttaagttggcctggtggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggt 12086121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 1729815 - 1729896
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||| || |||||| || |||||| |||||||| || || ||||||||||||| || ||||||| | || |||||||||    
T  1729815 aaacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctc 1729896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 19322767 - 19322848
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||| || ||||| ||| |||||| ||| |||| || || |||||||||||||||| ||||||  |||| |||||||||    
T  19322767 aaacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctc 19322848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 42922414 - 42922495
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttc-gaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| || |||||| ||||||||||| || ||||||||||||| ||  ||||||  ||||||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctc 42922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 19016031 - 19016095
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    |||||| || |||||||||| ||||| |||||||  || || ||||||||||||| |||||||||    
T  19016031 aacccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtct 19016095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 19244109 - 19244189
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||||||  ||||| || ||||| || ||||||||||||||||  | ||||||  ||||||||||||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctc 19244189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 36720380 - 36720461
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||| || |||||||||||||||| |||||||| | ||| ||||||||||||| ||||||| |  ||||||||||||||    
T  36720380 aaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctc 36720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 21960551 - 21960631
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||||| |||||  ||||||||| |||||||| || |||||||||||||||| |||||||||  | ||||||||||||    
T  21960551 aacccaattgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 31520683 - 31520600
Alignment:
Q  43 aaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    |||||||| || |||||| ||||||| | |||||||| |  || ||||||||||||| |||||||||| |||| ||||||||||    
T  31520683 aaaacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctcc 31520600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 32638943 - 32639026
Alignment:
Q  43 aaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    |||||||| || ||||| |||||||||| ||||||||||  || ||||||| || ||||||||||||  ||||||||| |||||    
T  32638943 aaaacccatttgggttgttctggtggtattggcttggaaactgggagtgtgttcatcttcgaggtctcaggttcgattttctcc 32639026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 4844577 - 4844503
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||||||||||||| || ||||| |  || ||||||||||||| |||||||||  || |||||||||||||||    
T  4844577 ggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggt 4844503  T

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Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 4870273 - 4870199
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||||||||||||| || ||||| |  || ||||||||||||| |||||||||  || |||||||||||||||    
T  4870273 ggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggt 4870199  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 27093439 - 27093357
Alignment:
Q  43 aaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||||| || |||||| || |||||| ||||||||||| || ||||||||||||| || ||||||  |||| |||||||||    
T  27093439 aaaacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctc 27093357  T

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Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 18316573 - 18316497
Alignment:
Q  46 acccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    ||||| || ||||||||||||||| ||||||||| || |  ||||||||||||| || ||||||| ||||||||||||    
T  18316573 acccacttgggttggtctggtggtgctggcttgggaccttggagtgtgctcctc-tcaaggtcttaggttcgattctc 18316497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 16354968 - 16354888
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| || |||||| ||||||||||| || ||||||||||||| ||  |||||  ||||||||||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctc 16354888  T

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Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 26481945 - 26482009
Alignment:
Q  63 tggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    |||||||| |||||||| || |||||||||||||||| || | || || ||||||||||||||||    
T  26481945 tggtggtaatggcttgggacctgagagtgtgctcctcctcaaagttttaggttcgattctctccg 26482009  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 27923119 - 27923065
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctc 99  Q
    |||||| ||||||||| ||||||||| |||||||| |||||  ||||||||||||    
T  27923119 aacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctc 27923065  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 53412955 - 53413025
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||||| |||||| ||||||| ||| || ||||||||||||| || ||||||  ||||| ||||||||    
T  53412955 ggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctc 53413025  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 10445188 - 10445135
Alignment:
Q  72 tggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||||| || || ||||||||||||| |||||||||  ||||||||||||||    
T  10445188 tggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 10445135  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 10499187 - 10499103
Alignment:
Q  43 aaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    |||||||| || |||||| ||||||||| |||||||| |  || |||| ||||| || | |||||||  ||||||||||||||||    
T  10499187 aaaacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccg 10499103  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 14186648 - 14186731
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| || |||||| || |||||| || ||||| || || ||||||||||||| || ||||||  ||||||||||||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctg-gagtgtgctcctcctcaaggtctcaggttcgattctctccggt 14186731  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 47810820 - 47810736
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| || |||||||||||||||| |||||| |  | || |||||||||||||  | ||||||  |||| |||||||||||||    
T  47810820 aacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcgggtttgattctctccggt 47810736  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 3624590 - 3624686
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc-ggtcaatttagctcggttaattta 150  Q
    |||||| || |||||| |||||||| || || |||||||||||||||| ||||||  ||||||||||||||| ||||||||||| | || |||||||    
T  3624590 ggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctccgggtcaatttaggtgggctaattta 3624686  T

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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 968373 - 968444
Alignment:
Q  56 gttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    ||||| ||||||||| |||||||| || || ||||||||||||| |||||||||  ||||||||||||||||    
T  968373 gttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccg 968444  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 16852339 - 16852418
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    ||||||| || |||||| || |||||| |||||||| || || ||||||||||||| |||||||||  ||||||||||||    
T  16852339 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 19703564 - 19703485
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    ||||||| || |||||| || |||||| |||||||| || |||||||||||||||| || ||||||  ||||||||||||    
T  19703564 aaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 8484998 - 8485083
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    ||||||| || |||||| ||||||||| | |||||| || || ||||||||||||||| |||||||    ||||||||||||||||    
T  8484998 aaacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggt 8485083  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 3058126 - 3058046
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctct 124  Q
    ||||||| || |||||||||||||||| ||| ||||  | || |||||||||||||| | ||||||  |||||||||||||    
T  3058126 aaacccatttgggttggtctggtggtattggtttgggtcttgggagtgtgctcctctgcaaggtctcaggttcgattctct 3058046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 35641978 - 35641896
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    ||||||| || ||||||||||||||||  ||||||  |  || ||||||||||||| |||| ||||  |||||||||||||||    
T  35641978 aaacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctcc 35641896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 5264543 - 5264608
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    ||||||| || |||||| || |||||| ||||||||||| || || |||||||||| |||||||||    
T  5264543 aaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtct 5264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 12281504 - 12281576
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    ||||| ||| |||||| |||||||| || ||||||||||| |||| |||||||||  | ||||||| ||||||    
T  12281504 ggttgttcttgtggtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgattttctccg 12281576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 18546431 - 18546355
Alignment:
Q  52 ttaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccgg 128  Q
    |||||||||||| |||||| ||  |||| || ||||||  |||||||| |||||||||  |||||||||||| ||||    
T  18546431 ttaggttggtctagtggtattgatttgggacctgagagcatgctcctcctcgaggtctcaggttcgattctcaccgg 18546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 22193398 - 22193358
Alignment:
Q  87 gagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    ||||||||||||| || ||||||| ||||||||||||||||    
T  22193398 gagtgtgctcctcctcaaggtcttaggttcgattctctccg 22193358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 29858113 - 29858049
Alignment:
Q  57 ttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattc 121  Q
    |||| ||||||||| |||||||| ||  | ||||||||||||| |||||||||  ||||||||||    
T  29858113 ttggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 19238653 - 19238569
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| || |||||| ||||||||| |||||||| || || ||||||||||||| |||||||||  |||||||||||| |||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggt 19238569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 46295097 - 46295181
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| ||||||||||||||| ||  |||||||| ||||  ||||||||||||| || ||||||  |||||||||||| |||||    
T  46295097 aacccacttaggttggtctggtagtgttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctccccggt 46295181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 56236991 - 56236935
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctctt 101  Q
    |||||||||||||||||||||||||| || ||||| | ||| |||||||||||||||    
T  56236991 aacccaattaggttggtctggtggtattgacttgggatatgggagtgtgctcctctt 56236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 7292864 - 7292794
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||||| |||||| ||||||||||| || ||||||||||||| || | ||||  ||||||||||||||    
T  7292864 ggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctc 7292794  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 49576967 - 49576889
Alignment:
Q  48 ccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    |||||| |||||| ||||||||| |||||| | || || ||||||||||||| || ||||||  |||||||||||||||    
T  49576967 ccaattgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctcc 49576889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 28635696 - 28635776
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||  |||||||||||| ||||| |  || ||||||||||||| | |||||||| ||||||||||||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctc 28635776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 37109427 - 37109347
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| || |||||| |||||||| || || ||||||||||||| || ||||||  ||||||||||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 37109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 39509070 - 39509177
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt--caatttagctcgg 142  Q
    |||||| || |||||||||  ||||| |||||||| |  || ||||||||||||| |||||||||  |||||||||||| || ||  |||||||| | ||    
T  39509070 aacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtggg 39509169  T
Q  143 ttaattta 150  Q
    ||||||||    
T  39509170 ttaattta 39509177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 47230516 - 47230580
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtct 109  Q
    |||||| || || |||||||||||||||||||||  ||||| ||||||||||||| |||| ||||    
T  47230516 aacccatttgggatggtctggtggtactggcttgagacatgtgagtgtgctcctcatcgaagtct 47230580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 55427276 - 55427198
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    |||||| || |||||| ||||||||| |||||||| || || |||| |||||||  |||||||||  ||||||||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 11592214 - 11592149
Alignment:
Q  60 gtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||| |||||| || ||||| || |||||||||||||||| || ||||||| ||||||||| ||||    
T  11592214 gtcttgtggtattgccttgggacctgagagtgtgctcctcctccaggtcttaggttcgattatctc 11592149  T

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Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 13496241 - 13496318
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattct 122  Q
    |||||| || ||||||  |||||||| || ||||| ||||| ||||||| |||||||||||||||   ||||||||||    
T  13496241 aacccacttgggttggcatggtggtattgacttgggacatgtgagtgtgttcctcttcgaggtctcgtgttcgattct 13496318  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 37274508 - 37274455
Alignment:
Q  72 tggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||||| || || ||||||||||||| || ||||||| ||||||||||||||    
T  37274508 tggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 37274455  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 2185098 - 2185026
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    |||||| || |||||| ||||||||||| || ||||||||||||  || | ||||  ||||||||||||||||    
T  2185098 ggttggcctagtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccg 2185026  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 13015447 - 13015534
Alignment:
Q  65 gtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg--gtcaatttagctcggttaattta 150  Q
    |||||| |||||||| || || ||||||||||||| |||| ||||   ||||||||||||| |  |||||||||| | ||||||||||    
T  13015447 gtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaattta 13015534  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 2446307 - 2446392
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    ||||||| || |||||||||| ||||| |||||||| || || ||||||||||||| ||||| |||   |||||||||||||||||    
T  2446307 aaacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggt 2446392  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 14058264 - 14058334
Alignment:
Q  56 gttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    ||||| ||||||||| || |||||||| ||||||||||||| || || ||||||  |||||||||||||||    
T  14058264 gttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctcc 14058334  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 14368292 - 14368362
Alignment:
Q  56 gttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctcc 126  Q
    ||||| ||||||||| || |||||||| ||||||||||||| || || ||||||  |||||||||||||||    
T  14368292 gttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctcc 14368362  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 20335907 - 20335829
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    |||||| || ||||||||| | |||| |||||||| || || ||||||||||||| |||||||||  ||||||||||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 22760863 - 22760941
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    |||||| || |||||||||||||||| || ||||| || || ||||||||||||| || ||||||  ||||||||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 43215182 - 43215264
Alignment:
Q  43 aaaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||||| || ||||||||| |||||| |||||||| || |  ||||||||||||| || ||||||  ||||||||||||||    
T  43215182 aaaacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctc 43215264  T

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Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 38374676 - 38374591
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    ||||||| || ||||||  |||||||  |||||||| || | |||||||||||||| || ||||||| |||||||||||| |||||    
T  38374676 aaacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggt 38374591  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 5273666 - 5273582
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| || |||||| ||||||||  |||||||| || | |||||||||||||| || ||||||| |||| |||| ||||||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctccggt 5273582  T

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Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 26459486 - 26459406
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    |||||| || |||||| || |||||| |||||||| || || ||||||||||||| || ||||||  ||||||||||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 26459406  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 7499973 - 7499922
Alignment:
Q  72 tggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    |||||||| || ||||||| ||||||||||||||||||  ||||||||||||    
T  7499973 tggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgattctc 7499922  T

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Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 45709785 - 45709702
Alignment:
Q  44 aaacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccg 127  Q
    ||||||| || |||||| || |||||| | |||||| |  |||||||||||||||| |||||||||  ||||||||| ||||||    
T  45709785 aaacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccg 45709702  T

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Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 2962469 - 2962539
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||||| |||||| ||| ||||||| || ||||||||||||| || || |||  ||||||||||||||    
T  2962469 ggttggtctagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctc 2962539  T

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Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 5668626 - 5668564
Alignment:
Q  66 tggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccgg 128  Q
    ||||| |||||||| |||||  |||||||||||| |||||||||  || ||||||||||||||    
T  5668626 tggtattggcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctccgg 5668564  T

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Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 19553464 - 19553537
Alignment:
Q  55 ggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| ||||||||| ||||||||| | || ||||||||||||| || ||||||| ||||| |||||| |||||    
T  19553464 ggttggcctggtggtattggcttggacc-tgggagtgtgctcctcctcaaggtcttaggttcaattctccccggt 19553537  T

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Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 43590907 - 43590985
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctc 123  Q
    |||||| || |||||| ||||||||| |||||||| || || ||||||||||||| || | ||||  ||||||||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctc 43590985  T

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Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 112282 - 112366
Alignment:
Q  45 aacccaattaggttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||||| || |||||| ||||| ||| ||||||||||  || ||||||| ||||||| |||||||  ||||||||||||||||||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctccggt 112366  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 49328 - 49390
Alignment:
Q  67 ggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctccggt 129  Q
    |||| |||||||| |  |||||||||||||||||||||||| |  ||||||||||||||||||    
T  49328 ggtattggcttgggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctccggt 49390  T

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Target: scaffold0299 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 11545 - 11608
Alignment:
Q  62 ctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||||||| |||||||| |  || ||||||||||||| |||||||||  ||||||||||||||    
T  11545 ctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 11608  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 20027 - 19958
Alignment:
Q  56 gttggtctggtggtactggcttggaacatgagagtgtgctcctcttcgaggtcttcggttcgattctctc 125  Q
    ||||| || |||||| ||||||||||| || |||| |||||||| || ||||||  ||||||||||||||    
T  20027 gttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctc 19958  T

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