View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_high_67 (Length: 351)
Name: NF1459_high_67
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_high_67 |
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Alignment Details
Target: chr5 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 22 - 336
Target Start/End: Complemental strand, 39342067 - 39341753
Alignment:
| Q |
22 |
tttattctctcttatcatatagaccggcctgtggtgtgtgactgtgttgacttaatcataatggaccgagctttgctaaaagttagacttcgtttgcttc |
121 |
Q |
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| T |
39342067 |
tttattctctcttatcatatagaccggcctgtggtgtgtgactgtgttgacttaatcataatggaccgagctttgctaaaagttagacttcgtttgcttc |
39341968 |
T |
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| Q |
122 |
tactgttgagttgtcatttgaactttgaagacattttttgtgaaaacaattacaaaagtcacaagtcgtcatgtttaagtttgatgtctcgttagttcaa |
221 |
Q |
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| T |
39341967 |
tactgttgagttgtcatttgaactttgaagacattttttgtgaaaccaattacaaaagtcacaagtcgtcatgtttaagtttgatgtctcgttagttcaa |
39341868 |
T |
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| Q |
222 |
gtgggtttatgttgaataagtcaacaattgaaagccttataggctctagttgagggtatcattgagaaatatggtataccattatgtaattcagatgata |
321 |
Q |
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| T |
39341867 |
gtgggtttatgttgaataagtcaacaattgaaagccttataggctctagttgagggtatcattgagaaatatggtataccattatgtaattcagatgata |
39341768 |
T |
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| Q |
322 |
cttctgtcacttcat |
336 |
Q |
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| T |
39341767 |
cttttgccacttcat |
39341753 |
T |
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