View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_high_74 (Length: 326)
Name: NF1459_high_74
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_high_74 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 12 - 326
Target Start/End: Complemental strand, 32861428 - 32861108
Alignment:
| Q |
12 |
atgaataaaatggcatgaacttaccaacactggaatgaagatagtataagtg----actcatgatataattcctgcaccccaagaataactttaaaacta |
107 |
Q |
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| T |
32861428 |
atgaataaaatggcatgaacttaccaacactggaatgaagatagtataagtgtattactcatgatataattcctgcaccccaagaataactttaaaacta |
32861329 |
T |
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| Q |
108 |
atttgaaacgaaatcattggtaaatactgcctacgtg--actctaaatattttgtaatttcaaaagcttagaggttcaccaaagaacttaccaaagctgg |
205 |
Q |
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| T |
32861328 |
atttgaaacgaaatcattggtaaatactgcctacgtgtgactctaaatattttgtaatttcgaaagcttagaggttcaccaaagaatttaccaaagctgg |
32861229 |
T |
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| Q |
206 |
atcagatttttcttttcttcagaaaaatgagcctcgtggttcaccaaagaaggtttaagagcttgtgcaatttctaactattttccttgtgcgagctcaa |
305 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32861228 |
atcagatttttctttttttcagaaaaatgagcctcgtggttcaccaaagaaggtttaagagcttgtgcaatttctaactattttccttgtgcgagctcaa |
32861129 |
T |
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| Q |
306 |
atcacttccatgaagaaatca |
326 |
Q |
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| T |
32861128 |
atcacttccatgaagaaatca |
32861108 |
T |
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