View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_high_79 (Length: 316)
Name: NF1459_high_79
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_high_79 |
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Alignment Details
Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 26035268 - 26035356
Alignment:
| Q |
201 |
tgaaaacaataagattaagataatcataattataattacctcccaaacagtcatagaatcttgattaaaacctttcataccttgttgtg |
289 |
Q |
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| T |
26035268 |
tgaaaacaataagattaagataatcataattataattacctcccaaacagtcattgaatcttgattaacacctttcataccttgttgtg |
26035356 |
T |
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Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 26035096 - 26035164
Alignment:
| Q |
13 |
aatattatccttgaaattcatcaaaagttagtgattaatcaaattgaaatggaacaaaaatccatgatc |
81 |
Q |
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| T |
26035096 |
aatattatccttgaaattcatcaaaaggtaatgattaatcaaattgaaatggaacaaaaatccatgatc |
26035164 |
T |
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