View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_high_97 (Length: 279)
Name: NF1459_high_97
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_high_97 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 31610929 - 31611207
Alignment:
| Q |
1 |
gacattgttgttgttgttagaaattaattctcaatatatgtgctgctgcaatcttagtagccaagttcaggacaaggataaattaatagggttgctaaaa |
100 |
Q |
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| T |
31610929 |
gacattgttgttgttgttagaaattaattctcaatatatgagctgctgcaatcttagtagccaagttcaggacaaggataaattaatagggttgctaaaa |
31611028 |
T |
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| Q |
101 |
agcattcctatacgacatctttttaaaagcctttttatttccttctgatagataatggatatactcaaagcctccattaaccacattaacacacaataaa |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
31611029 |
agcatttctatacgacatctttttaaaagcctttttatttccttctgatagataatggatatactcaaagcctccattaaacacattaacacacaataaa |
31611128 |
T |
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| Q |
201 |
ttaaaacatcttccatgttttaggacacaagcaaagtttttaatacattttaatttggcagacaaaacccttcactaca |
279 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31611129 |
ttaaaacatcttccatgttttaggacacaggcaaagtttttaatacattttaatttggcagacaaaacccttcactaca |
31611207 |
T |
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