View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1459_low_104 (Length: 275)

Name: NF1459_low_104
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1459_low_104
NF1459_low_104
[»] chr5 (58 HSPs)
chr5 (1-175)||(9987160-9987334)
chr5 (1-175)||(27550814-27550988)
chr5 (1-175)||(7180896-7181070)
chr5 (2-175)||(31551967-31552145)
chr5 (19-175)||(12499453-12499609)
chr5 (19-175)||(9591853-9592009)
chr5 (19-175)||(42612059-42612215)
chr5 (19-175)||(745412-745568)
chr5 (19-175)||(19665006-19665162)
chr5 (19-175)||(27019937-27020093)
chr5 (19-175)||(37270481-37270637)
chr5 (3-175)||(20545995-20546164)
chr5 (19-175)||(30130760-30130916)
chr5 (1-88)||(11076953-11077040)
chr5 (19-175)||(13305268-13305424)
chr5 (19-175)||(39588502-39588659)
chr5 (19-175)||(11984694-11984850)
chr5 (21-175)||(824652-824806)
chr5 (22-175)||(15420435-15420592)
chr5 (1-88)||(8520393-8520480)
chr5 (15-143)||(744708-744840)
chr5 (1-88)||(37256225-37256312)
chr5 (15-142)||(9986452-9986583)
chr5 (15-142)||(27551562-27551693)
chr5 (1-88)||(5100375-5100462)
chr5 (1-88)||(29390810-29390897)
chr5 (1-88)||(29640300-29640387)
chr5 (1-88)||(34858416-34858503)
chr5 (15-143)||(9592578-9592710)
chr5 (15-143)||(15421121-15421253)
chr5 (15-143)||(19665731-19665863)
chr5 (15-143)||(20545313-20545445)
chr5 (15-143)||(27019236-27019368)
chr5 (113-175)||(34654188-34654250)
chr5 (15-143)||(37939604-37939736)
chr5 (3-88)||(3035756-3035841)
chr5 (3-88)||(8525639-8525724)
chr5 (15-142)||(37271196-37271327)
chr5 (1-88)||(3033215-3033302)
chr5 (1-84)||(15524258-15524341)
chr5 (1-88)||(29389121-29389208)
chr5 (1-88)||(29639470-29639557)
chr5 (15-143)||(823946-824078)
chr5 (15-143)||(12500178-12500310)
chr5 (15-142)||(11985427-11985558)
chr5 (15-88)||(7180774-7180851)
chr5 (15-49)||(19503905-19503939)
chr5 (6-88)||(37250321-37250403)
chr5 (15-143)||(39589210-39589342)
chr5 (15-142)||(13304561-13304692)
chr5 (15-138)||(30130060-30130186)
chr5 (1-38)||(34663448-34663485)
chr5 (1-49)||(5102859-5102907)
chr5 (15-88)||(42611368-42611445)
chr5 (22-57)||(19665917-19665952)
chr5 (1-43)||(15527157-15527199)
chr5 (15-57)||(31551261-31551303)
chr5 (20-88)||(6719642-6719710)
[»] scaffold0208 (2 HSPs)
scaffold0208 (1-175)||(5590-5764)
scaffold0208 (15-142)||(4931-5062)
[»] chr4 (78 HSPs)
chr4 (2-175)||(34073077-34073249)
chr4 (3-175)||(52447436-52447606)
chr4 (20-175)||(16664722-16664877)
chr4 (20-175)||(35824599-35824754)
chr4 (19-175)||(13534394-13534550)
chr4 (19-175)||(20786865-20787021)
chr4 (19-175)||(23419135-23419291)
chr4 (19-175)||(54919459-54919615)
chr4 (1-175)||(31309686-31309860)
chr4 (19-175)||(3035644-3035800)
chr4 (19-175)||(4653033-4653189)
chr4 (19-175)||(30827333-30827489)
chr4 (19-175)||(46717770-46717926)
chr4 (3-175)||(8939463-8939633)
chr4 (22-175)||(17361205-17361358)
chr4 (19-175)||(20353905-20354061)
chr4 (19-173)||(49873796-49873950)
chr4 (1-173)||(50496016-50496196)
chr4 (19-175)||(23933385-23933541)
chr4 (21-173)||(31292434-31292586)
chr4 (19-175)||(49970054-49970210)
chr4 (19-175)||(27962274-27962428)
chr4 (19-88)||(41041358-41041427)
chr4 (1-88)||(43590430-43590517)
chr4 (15-143)||(20786221-20786353)
chr4 (1-87)||(38623455-38623541)
chr4 (57-147)||(7487383-7487473)
chr4 (3-88)||(43594124-43594209)
chr4 (1-88)||(31624514-31624601)
chr4 (96-175)||(35045137-35045216)
chr4 (15-143)||(54920185-54920317)
chr4 (19-72)||(7487314-7487367)
chr4 (15-142)||(35825332-35825463)
chr4 (15-142)||(46718505-46718636)
chr4 (1-88)||(8081042-8081129)
chr4 (1-88)||(10658999-10659086)
chr4 (1-88)||(10873144-10873231)
chr4 (1-88)||(19869856-19869943)
chr4 (1-88)||(49645921-49646008)
chr4 (15-143)||(4653758-4653890)
chr4 (15-143)||(20342469-20342601)
chr4 (15-143)||(20353194-20353326)
chr4 (15-143)||(52448175-52448307)
chr4 (15-138)||(17361893-17362020)
chr4 (1-88)||(31623313-31623400)
chr4 (1-88)||(48952926-48953013)
chr4 (1-88)||(50792532-50792619)
chr4 (1-88)||(51943528-51943615)
chr4 (2-88)||(24577752-24577838)
chr4 (15-143)||(27958611-27958743)
chr4 (15-142)||(23932675-23932806)
chr4 (3-88)||(30112805-30112890)
chr4 (15-142)||(31291814-31291945)
chr4 (15-142)||(34073801-34073932)
chr4 (15-142)||(35045757-35045888)
chr4 (15-142)||(49874532-49874663)
chr4 (15-88)||(7488107-7488184)
chr4 (1-49)||(19871115-19871163)
chr4 (1-49)||(30114269-30114317)
chr4 (15-88)||(50495387-50495464)
chr4 (15-62)||(13533688-13533735)
chr4 (9-88)||(26923655-26923734)
chr4 (1-88)||(40846636-40846723)
chr4 (1-88)||(50790720-50790807)
chr4 (3-49)||(7111694-7111740)
chr4 (15-143)||(16665446-16665578)
chr4 (15-143)||(23418432-23418564)
chr4 (1-55)||(43940254-43940308)
chr4 (15-88)||(30824809-30824886)
chr4 (17-143)||(41040676-41040806)
chr4 (20-88)||(47650679-47650747)
chr4 (15-88)||(55450519-55450596)
chr4 (15-54)||(9368019-9368058)
chr4 (22-57)||(20786132-20786167)
chr4 (3-88)||(26918274-26918356)
chr4 (35-88)||(7113705-7113758)
chr4 (1-49)||(14269978-14270026)
chr4 (123-171)||(55450955-55451003)
[»] chr2 (50 HSPs)
chr2 (1-175)||(3754703-3754880)
chr2 (1-175)||(27551417-27551591)
chr2 (1-175)||(3851546-3851723)
chr2 (1-175)||(42080619-42080796)
chr2 (1-175)||(39774923-39775098)
chr2 (1-175)||(6644699-6644873)
chr2 (19-175)||(3906712-3906868)
chr2 (21-175)||(2292121-2292275)
chr2 (23-175)||(37725322-37725474)
chr2 (10-175)||(4738059-4738224)
chr2 (19-175)||(15152630-15152786)
chr2 (19-175)||(25223531-25223687)
chr2 (20-175)||(15399041-15399196)
chr2 (19-138)||(14005921-14006040)
chr2 (19-175)||(38282081-38282228)
chr2 (39-175)||(77423-77559)
chr2 (20-135)||(28391662-28391777)
chr2 (1-88)||(33178857-33178944)
chr2 (15-142)||(2291412-2291543)
chr2 (1-88)||(18248497-18248584)
chr2 (1-88)||(36600833-36600920)
chr2 (15-143)||(38281380-38281512)
chr2 (15-142)||(15399779-15399910)
chr2 (1-88)||(6319433-6319520)
chr2 (1-88)||(6322256-6322343)
chr2 (1-88)||(14454478-14454565)
chr2 (1-88)||(21191677-21191764)
chr2 (1-88)||(24520334-24520421)
chr2 (1-88)||(33182685-33182772)
chr2 (1-88)||(33853081-33853168)
chr2 (1-88)||(38932354-38932441)
chr2 (15-143)||(76751-76881)
chr2 (15-143)||(37724624-37724756)
chr2 (15-142)||(27550727-27550858)
chr2 (3-88)||(36602848-36602932)
chr2 (15-88)||(39774300-39774377)
chr2 (103-175)||(39966979-39967051)
chr2 (15-142)||(1054255-1054386)
chr2 (15-142)||(15153354-15153485)
chr2 (15-138)||(28391066-28391193)
chr2 (15-88)||(3850913-3850990)
chr2 (2-88)||(18246589-18246674)
chr2 (15-143)||(39966278-39966410)
chr2 (14-88)||(40495330-40495404)
chr2 (15-62)||(3906023-3906070)
chr2 (15-62)||(6645951-6645998)
chr2 (9-88)||(39160000-39160079)
chr2 (9-88)||(39209115-39209194)
chr2 (15-88)||(3754053-3754130)
chr2 (14-70)||(40517926-40517982)
[»] chr8 (72 HSPs)
chr8 (5-175)||(42645403-42645573)
chr8 (1-175)||(28085716-28085890)
chr8 (1-175)||(30556505-30556678)
chr8 (1-175)||(30105823-30105997)
chr8 (10-175)||(4622559-4622724)
chr8 (8-175)||(43694983-43695150)
chr8 (7-175)||(3850116-3850284)
chr8 (19-175)||(15883237-15883393)
chr8 (19-175)||(23346979-23347135)
chr8 (19-175)||(3704946-3705102)
chr8 (19-175)||(13141121-13141277)
chr8 (3-175)||(16095994-16096166)
chr8 (19-175)||(25583417-25583573)
chr8 (1-175)||(45409032-45409204)
chr8 (19-175)||(276833-276989)
chr8 (19-175)||(638860-639016)
chr8 (19-175)||(824666-824822)
chr8 (19-173)||(44256194-44256348)
chr8 (19-175)||(2082090-2082246)
chr8 (19-175)||(17948309-17948465)
chr8 (19-175)||(27912495-27912651)
chr8 (19-175)||(27958914-27959070)
chr8 (19-175)||(42735695-42735851)
chr8 (10-175)||(41545064-41545229)
chr8 (19-175)||(6093425-6093581)
chr8 (20-175)||(39858112-39858267)
chr8 (19-175)||(18955345-18955501)
chr8 (1-88)||(18089334-18089421)
chr8 (19-137)||(38576901-38577018)
chr8 (44-175)||(40304191-40304325)
chr8 (8-147)||(5586950-5587089)
chr8 (1-88)||(26951130-26951217)
chr8 (15-142)||(45408338-45408469)
chr8 (1-84)||(43129486-43129569)
chr8 (15-142)||(42646152-42646283)
chr8 (15-142)||(43694273-43694404)
chr8 (1-88)||(15825752-15825839)
chr8 (1-88)||(19143038-19143125)
chr8 (1-88)||(26920412-26920499)
chr8 (15-143)||(638157-638289)
chr8 (15-143)||(15882547-15882679)
chr8 (15-143)||(23346276-23346408)
chr8 (15-143)||(26949959-26950091)
chr8 (15-143)||(38060354-38060486)
chr8 (15-142)||(6095630-6095761)
chr8 (15-138)||(13140421-13140548)
chr8 (15-142)||(30555795-30555926)
chr8 (15-142)||(39858815-39858946)
chr8 (15-142)||(42736411-42736542)
chr8 (15-137)||(41545669-41545795)
chr8 (18-143)||(277560-277689)
chr8 (18-143)||(823966-824095)
chr8 (1-88)||(23625805-23625892)
chr8 (1-88)||(35019383-35019470)
chr8 (1-88)||(38364587-38364674)
chr8 (15-143)||(18956277-18956409)
chr8 (15-143)||(27913220-27913352)
chr8 (15-143)||(27959639-27959771)
chr8 (1-79)||(29726473-29726551)
chr8 (15-143)||(44256918-44257050)
chr8 (15-138)||(40303477-40303604)
chr8 (15-142)||(40617323-40617454)
chr8 (1-49)||(17981304-17981352)
chr8 (15-88)||(18088644-18088721)
chr8 (1-49)||(31642903-31642951)
chr8 (1-88)||(29725637-29725724)
chr8 (15-142)||(3850853-3850984)
chr8 (15-88)||(16096551-16096628)
chr8 (15-88)||(36192310-36192387)
chr8 (18-88)||(30111616-30111690)
chr8 (20-88)||(39068997-39069065)
chr8 (8-88)||(41671327-41671407)
[»] chr7 (78 HSPs)
chr7 (1-175)||(17968087-17968260)
chr7 (1-175)||(23594338-23594513)
chr7 (1-175)||(30759862-30760039)
chr7 (19-175)||(725302-725458)
chr7 (1-175)||(46936053-46936228)
chr7 (1-175)||(47503661-47503838)
chr7 (3-175)||(28589366-28589536)
chr7 (19-175)||(16277339-16277495)
chr7 (19-175)||(20120083-20120239)
chr7 (3-175)||(41858318-41858490)
chr7 (19-175)||(44459072-44459228)
chr7 (19-175)||(9663370-9663526)
chr7 (19-175)||(18994736-18994892)
chr7 (19-175)||(21815459-21815615)
chr7 (19-175)||(48683318-48683474)
chr7 (3-175)||(48951947-48952119)
chr7 (19-174)||(47909157-47909312)
chr7 (19-175)||(4924998-4925154)
chr7 (19-175)||(33246408-33246564)
chr7 (19-175)||(46555264-46555420)
chr7 (20-175)||(3415924-3416079)
chr7 (19-175)||(48607400-48607556)
chr7 (8-175)||(46000757-46000924)
chr7 (1-173)||(21729743-21729914)
chr7 (19-175)||(40015456-40015612)
chr7 (19-175)||(44882811-44882967)
chr7 (19-175)||(41336359-41336516)
chr7 (108-175)||(44522703-44522770)
chr7 (20-84)||(41289464-41289528)
chr7 (1-88)||(596222-596309)
chr7 (1-88)||(19064064-19064151)
chr7 (1-88)||(37708207-37708294)
chr7 (15-138)||(16274340-16274467)
chr7 (3-88)||(43543136-43543221)
chr7 (15-142)||(44521163-44521294)
chr7 (15-142)||(46935354-46935485)
chr7 (15-141)||(41289225-41289355)
chr7 (1-88)||(33982431-33982518)
chr7 (1-88)||(38224484-38224571)
chr7 (1-88)||(41406084-41406171)
chr7 (1-88)||(41408010-41408097)
chr7 (15-136)||(41857721-41857846)
chr7 (1-88)||(47254593-47254680)
chr7 (15-143)||(3415223-3415353)
chr7 (15-143)||(20120807-20120939)
chr7 (15-143)||(21816184-21816316)
chr7 (15-143)||(41337086-41337218)
chr7 (2-88)||(43545012-43545098)
chr7 (15-142)||(5373610-5373741)
chr7 (15-138)||(17967379-17967506)
chr7 (15-138)||(40014755-40014882)
chr7 (15-141)||(21736276-21736406)
chr7 (14-143)||(724600-724733)
chr7 (1-88)||(1602242-1602328)
chr7 (20-71)||(5374365-5374416)
chr7 (1-88)||(33979512-33979599)
chr7 (15-143)||(28588682-28588814)
chr7 (15-143)||(48684044-48684176)
chr7 (3-88)||(1599556-1599641)
chr7 (15-142)||(48606690-48606821)
chr7 (1-49)||(47252113-47252161)
chr7 (1-88)||(586004-586091)
chr7 (15-62)||(4658169-4658216)
chr7 (15-62)||(9662664-9662711)
chr7 (1-72)||(28337556-28337627)
chr7 (1-88)||(42825751-42825838)
chr7 (103-149)||(8393277-8393323)
chr7 (15-57)||(33245707-33245749)
chr7 (15-143)||(48951350-48951482)
chr7 (15-142)||(8392536-8392667)
chr7 (6-88)||(46160611-46160695)
chr7 (1-88)||(42833840-42833928)
chr7 (15-88)||(44458371-44458448)
chr7 (15-55)||(44883618-44883658)
chr7 (15-55)||(46554564-46554604)
chr7 (1-36)||(10934308-10934343)
chr7 (15-62)||(30758328-30758375)
chr7 (61-142)||(30759204-30759285)
[»] chr3 (102 HSPs)
chr3 (1-175)||(30363493-30363667)
chr3 (1-175)||(37181783-37181957)
chr3 (1-175)||(53778184-53778358)
chr3 (1-175)||(3892497-3892675)
chr3 (18-175)||(16008865-16009022)
chr3 (3-175)||(37219910-37220082)
chr3 (19-175)||(41101749-41101905)
chr3 (3-175)||(50548296-50548468)
chr3 (1-175)||(22428752-22428926)
chr3 (2-175)||(47912755-47912927)
chr3 (19-175)||(4232892-4233048)
chr3 (19-175)||(16463997-16464153)
chr3 (21-175)||(45170075-45170229)
chr3 (19-175)||(18410294-18410450)
chr3 (19-175)||(27126288-27126444)
chr3 (19-175)||(27321086-27321242)
chr3 (19-175)||(43338427-43338583)
chr3 (19-175)||(44843010-44843166)
chr3 (19-175)||(51722613-51722769)
chr3 (3-175)||(13213523-13213696)
chr3 (19-172)||(37785515-37785668)
chr3 (19-175)||(11121679-11121835)
chr3 (19-147)||(15084404-15084532)
chr3 (19-175)||(30043300-30043456)
chr3 (21-175)||(41697909-41698063)
chr3 (19-175)||(30440104-30440260)
chr3 (20-175)||(45053532-45053687)
chr3 (1-147)||(42826057-42826203)
chr3 (19-175)||(27325472-27325628)
chr3 (19-175)||(27331709-27331865)
chr3 (2-175)||(55411258-55411427)
chr3 (20-175)||(38235587-38235741)
chr3 (19-145)||(40423772-40423898)
chr3 (34-175)||(23019881-23020022)
chr3 (19-147)||(8851625-8851752)
chr3 (19-172)||(38696929-38697076)
chr3 (19-173)||(22604944-22605100)
chr3 (38-173)||(10827542-10827677)
chr3 (52-175)||(6175462-6175585)
chr3 (8-147)||(22732463-22732602)
chr3 (19-84)||(2218116-2218181)
chr3 (15-143)||(2218794-2218922)
chr3 (19-127)||(40906241-40906349)
chr3 (3-80)||(27238956-27239034)
chr3 (15-142)||(37181106-37181237)
chr3 (16-144)||(22605664-22605795)
chr3 (1-88)||(39131803-39131890)
chr3 (15-143)||(27331035-27331167)
chr3 (15-142)||(18762737-18762868)
chr3 (15-142)||(31312743-31312874)
chr3 (19-72)||(53845378-53845431)
chr3 (15-88)||(37786270-37786347)
chr3 (1-88)||(36471656-36471743)
chr3 (1-88)||(41889537-41889624)
chr3 (5-88)||(42877140-42877223)
chr3 (1-88)||(50938353-50938440)
chr3 (15-143)||(16464722-16464854)
chr3 (15-143)||(27126981-27127113)
chr3 (15-143)||(30042603-30042735)
chr3 (15-143)||(44842310-44842442)
chr3 (15-143)||(50610242-50610374)
chr3 (15-138)||(16009597-16009724)
chr3 (15-142)||(38236323-38236454)
chr3 (3-88)||(42164103-42164188)
chr3 (15-142)||(42826792-42826923)
chr3 (1-88)||(2229286-2229371)
chr3 (1-88)||(22977974-22978061)
chr3 (1-88)||(39129196-39129283)
chr3 (15-143)||(40906941-40907074)
chr3 (1-88)||(48071872-48071959)
chr3 (15-143)||(8850896-8851028)
chr3 (15-143)||(11122405-11122537)
chr3 (15-143)||(41697208-41697340)
chr3 (15-138)||(18411024-18411151)
chr3 (15-138)||(30362715-30362842)
chr3 (15-142)||(38697657-38697788)
chr3 (3-88)||(43862442-43862527)
chr3 (1-49)||(36465746-36465794)
chr3 (8-88)||(41888712-41888792)
chr3 (15-88)||(45052831-45052908)
chr3 (15-88)||(45170849-45170926)
chr3 (15-141)||(53777480-53777610)
chr3 (22-61)||(37786397-37786436)
chr3 (1-88)||(43359398-43359484)
chr3 (1-88)||(50935609-50935696)
chr3 (129-175)||(2218179-2218225)
chr3 (15-143)||(37219314-37219446)
chr3 (15-143)||(41102476-41102606)
chr3 (1-55)||(43357994-43358048)
chr3 (15-138)||(4232037-4232164)
chr3 (3-88)||(42879566-42879651)
chr3 (15-138)||(43339165-43339292)
chr3 (15-88)||(22428037-22428114)
chr3 (20-88)||(54409532-54409600)
chr3 (15-62)||(23020675-23020722)
chr3 (1-88)||(48073786-48073873)
chr3 (1-55)||(22981266-22981320)
chr3 (1-55)||(43860620-43860674)
chr3 (15-57)||(50547595-50547637)
chr3 (15-143)||(52746429-52746561)
chr3 (59-141)||(55412018-55412100)
chr3 (20-88)||(32001061-32001129)
[»] chr1 (52 HSPs)
chr1 (1-175)||(25655883-25656057)
chr1 (19-175)||(48127825-48127981)
chr1 (1-175)||(12768270-12768447)
chr1 (1-175)||(30302823-30302997)
chr1 (18-175)||(33704650-33704807)
chr1 (19-175)||(29521727-29521883)
chr1 (19-175)||(35954468-35954624)
chr1 (1-147)||(29649522-29649668)
chr1 (1-175)||(33006262-33006436)
chr1 (14-175)||(14488624-14488785)
chr1 (19-175)||(24781115-24781271)
chr1 (19-175)||(31030141-31030297)
chr1 (19-175)||(36307893-36308049)
chr1 (1-175)||(5326751-5326926)
chr1 (20-175)||(36730718-36730873)
chr1 (19-173)||(10772784-10772938)
chr1 (19-175)||(7152975-7153131)
chr1 (19-175)||(44512222-44512378)
chr1 (1-175)||(46118270-46118443)
chr1 (1-175)||(52404634-52404805)
chr1 (19-88)||(30838598-30838667)
chr1 (20-131)||(51086826-51086937)
chr1 (15-142)||(30302108-30302239)
chr1 (1-85)||(23258981-23259065)
chr1 (1-88)||(44299214-44299301)
chr1 (1-88)||(44300060-44300147)
chr1 (15-147)||(29648660-29648796)
chr1 (15-142)||(25656626-25656757)
chr1 (1-88)||(4640209-4640296)
chr1 (20-127)||(7556314-7556419)
chr1 (1-88)||(43847545-43847632)
chr1 (15-143)||(10773511-10773643)
chr1 (15-143)||(36308622-36308754)
chr1 (15-138)||(33705385-33705512)
chr1 (15-142)||(46119024-46119155)
chr1 (1-88)||(4638289-4638376)
chr1 (15-143)||(7153700-7153832)
chr1 (15-88)||(7556861-7556938)
chr1 (15-88)||(9135221-9135298)
chr1 (15-88)||(12769004-12769081)
chr1 (1-88)||(42159508-42159595)
chr1 (1-88)||(44110048-44110134)
chr1 (15-62)||(44511526-44511573)
chr1 (15-57)||(48128600-48128642)
chr1 (15-57)||(52405460-52405502)
chr1 (15-57)||(52406893-52406935)
chr1 (15-142)||(36731452-36731582)
chr1 (15-142)||(51087506-51087637)
chr1 (15-141)||(46463910-46464044)
chr1 (116-175)||(52405848-52405906)
chr1 (116-175)||(52406180-52406238)
chr1 (1-86)||(11756990-11757074)
[»] chr6 (37 HSPs)
chr6 (1-175)||(24083154-24083328)
chr6 (1-175)||(21861136-21861313)
chr6 (19-175)||(11837458-11837614)
chr6 (19-175)||(14104040-14104196)
chr6 (19-175)||(17550698-17550854)
chr6 (19-175)||(955456-955612)
chr6 (19-175)||(4589692-4589848)
chr6 (19-175)||(28578657-28578813)
chr6 (3-147)||(27782503-27782645)
chr6 (19-175)||(11154490-11154646)
chr6 (19-175)||(16918445-16918601)
chr6 (19-147)||(27438447-27438575)
chr6 (7-175)||(25109578-25109745)
chr6 (21-175)||(23580329-23580482)
chr6 (1-88)||(5090200-5090287)
chr6 (1-88)||(32562527-32562614)
chr6 (15-142)||(28579368-28579499)
chr6 (1-88)||(13866160-13866247)
chr6 (1-88)||(34574711-34574798)
chr6 (15-135)||(14104763-14104887)
chr6 (15-143)||(16918936-16919068)
chr6 (15-142)||(954746-954877)
chr6 (15-142)||(15288224-15288355)
chr6 (15-62)||(1090499-1090546)
chr6 (17-142)||(11153794-11153923)
chr6 (5-84)||(15508249-15508328)
chr6 (1-88)||(24159134-24159221)
chr6 (15-143)||(4589009-4589141)
chr6 (15-135)||(11836760-11836884)
chr6 (15-143)||(23573838-23573970)
chr6 (22-142)||(24083887-24084011)
chr6 (15-143)||(27783240-27783372)
chr6 (1-54)||(5088728-5088781)
chr6 (8-88)||(13869082-13869162)
chr6 (15-88)||(25119525-25119602)
chr6 (15-57)||(21860503-21860545)
chr6 (15-62)||(27440762-27440809)
[»] scaffold0060 (2 HSPs)
scaffold0060 (1-175)||(56349-56526)
scaffold0060 (15-88)||(57087-57164)
[»] scaffold0259 (2 HSPs)
scaffold0259 (1-175)||(5887-6061)
scaffold0259 (15-142)||(5088-5219)
[»] scaffold0003 (2 HSPs)
scaffold0003 (19-147)||(48787-48915)
scaffold0003 (15-62)||(46552-46599)
[»] scaffold0115 (2 HSPs)
scaffold0115 (19-147)||(20954-21081)
scaffold0115 (15-143)||(22764-22896)
[»] scaffold0217 (1 HSPs)
scaffold0217 (3-88)||(904-989)
[»] scaffold0014 (2 HSPs)
scaffold0014 (2-88)||(71668-71754)
scaffold0014 (1-84)||(69594-69677)
[»] scaffold0075 (1 HSPs)
scaffold0075 (15-135)||(18417-18541)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-88)||(94520-94606)


Alignment Details
Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 9987334 - 9987160
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||       |||||    
T  9987334 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttttaacaaataaaattttacatcaaatatttttcatct 9987235  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9987234 agatgtccttaaattcatcaattacattcataaaatttcttccattctaaaatcccgaacgtgagaacaaaaaca 9987160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 27550814 - 27550988
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  27550814 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttttttcatct 27550913  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  27550914 ggatgtccttaaattcatcacttacattcataaaatttcttctattctaaaaccccgaacgtgagaacaaaaaca 27550988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 7181070 - 7180896
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  7181070 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttttttcatct 7180971  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||| |||||||    
T  7180970 ggatgtccttaaattcatcacttacattcataaaatttattccattctaaaacccagaacgtgagaataaaaaca 7180896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 31552145 - 31551967
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa-nnnnnnncatct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||        |||||    
T  31552145 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagactaataacaaataaaattttacatcaaattttttttcatct 31552046  T
Q  101 cgatgttcttaaattcatcac----ttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  31552045 ggatgtccttaaattcatcacttaattacattcataaaatttcttccattctaaaaccccgaacgtgagaacaaaaaca 31551967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 12499453 - 12499609
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||||| |||||||||||    
T  12499453 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttatttcatctcgatgtccttaaattcat 12499552  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  12499553 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 12499609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 9591853 - 9592009
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| |||||| ||||||||||    
T  9591853 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctagatgttgttaaattcat 9591952  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || || || ||||||||||||||||    
T  9591953 catttacattcataaaatttcttccattccagaaccctgaacgtgagaacaaaaaca 9592009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 42612215 - 42612059
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  42612215 ttatattaaggtgttcaatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 42612116  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  42612115 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 42612059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 745568 - 745412
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  745568 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 745469  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||| |||||||||||| | || || || ||||||||||||||||    
T  745468 catttacattcataaattttcttccattccagaaccctgaacgtgagaacaaaaaca 745412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 19665006 - 19665162
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| |||||  ||||||||||    
T  19665006 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtctttaaattcat 19665105  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||  | || ||||| ||||||||||||||||    
T  19665106 catttacattcataaaatttcttccattacagaaccccgaacgtgagaacaaaaaca 19665162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 27020093 - 27019937
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  27020093 ttatattaaagtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 27019994  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||| ||| |||||||||| || ||||| ||||||||||||||||    
T  27019993 catttacattcataaatttttttccattctagaaccccgaacgtgagaacaaaaaca 27019937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 37270481 - 37270637
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||       ||||| ||||| |||||||||||    
T  37270481 ttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttatatcaaatttctttcatctggatgtccttaaattcat 37270580  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||| | || ||||| | ||||||||||||||    
T  37270581 cacttacattcataaaatttcttccattccagaaccccgaacctgagaacaaaaaca 37270637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 20546164 - 20545995
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| |    
T  20546164 tttaattttttttt--ttatattaaggtgttcaatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttctttcatctgg 20546067  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| | || ||||| |||||| |||||||||    
T  20546066 atgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaacgtgag-acaaaaaca 20545995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 30130916 - 30130760
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  30130916 ttatattaaggtgttcaatcttaattaatttacactataaaacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 30130817  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||| |||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  30130816 catttatattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 30130760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11076953 - 11077040
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11076953 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaa 11077040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 13305424 - 13305268
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||||| ||||| |||| ||| |||| ||||||||||||| |||||||||||||||       ||| | ||||| |||||||||||    
T  13305424 ttatattaaggtgttcaatcataattgatttacaccacaacacttataacaaattaaattttacatcaaatttctttcatttggatgtccttaaattcat 13305325  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  13305324 cacttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 13305268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 39588502 - 39588659
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaat-aaaattttacatcaaannnnnnncatctcgatgttcttaaattca 117  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||       ||||| ||||| ||||||||||    
T  39588502 ttatattaaggtgttcaatcttaattaatttacattacaagacttataacaaataaaaattttacatcaaatttctttcatctggatgtccttaaattca 39588601  T
Q  118 tcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| ||||||||||||| |||||| ||||| | ||  |||| ||||||||||||||||    
T  39588602 tcatttacattcataaattttctttcattccagaactccgaacgtgagaacaaaaaca 39588659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 11984694 - 11984850
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||| |||||||| |||||||| || || |||||||||||||||||||||||||||||||||||       ||||| ||| | |||||||||||    
T  11984694 ttatattaagatgttcaattttaattaaattacattacaagacttataacaaataaaattttacatcaaatttctttcatcttgatctccttaaattcat 11984793  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||| ||||| |||||| |||||||  ||||||||||||||||    
T  11984794 catttacattcataaaatgtcttctattctagaatcccgtacgtgagaacaaaaaca 11984850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 824806 - 824652
Alignment:
Q  21 atattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatca 120  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||||    
T  824806 atattaaggtgttcactcttaattaatttacactagaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatca 824707  T
Q  121 cttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||||| |||| |||||||| ||||| | || |  || ||||||||||||||||    
T  824706 tttacatccatacaatttctttcattccagaaccatgaacgtgagaacaaaaaca 824652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 15420435 - 15420592
Alignment:
Q  22 tattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcac 121  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||       ||||| ||||| |||||||||||||     
T  15420435 tattaaggtgttaaatcttaattaatttacactacaa-acttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcat 15420533  T
Q  122 ttacattcata-----aaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||     ||||||||||||||  | || ||||| ||||||||||||||||    
T  15420534 ttacattcataaaattaaatttcttccatttcagaaacccgaacgtgagaacaaaaaca 15420592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8520393 - 8520480
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||||||||||||    
T  8520393 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaattttacatcaaa 8520480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 744708 - 744840
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||||||||| |||||||| ||||||||       |||||  |||| |||    
T  744708 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttataacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 744807  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||||||||||||||||| ||||    
T  744808 aaatttatcagttacattcataaaatttattcc 744840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37256312 - 37256225
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  37256312 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttgacatcaaa 37256225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 9986452 - 9986583
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| ||    |||||||| | |||||||| ||||||||       |||||  |||| |||    
T  9986452 ttaattatatttaggtgttcaatcctaattaatttacactacatgactggcttataacgattaaaatttcacatcaaatttctttcatctaaatgtcctt 9986551  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  9986552 aaatttatcagttacattcataaaatttcttc 9986583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 27551693 - 27551562
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  27551693 ttaattatatttaggtgttcaatcctaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 27551594  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  27551593 aaatttatcagttacattcataaaatttcttc 27551562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5100375 - 5100462
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  5100375 cttttaattttaatttaattatatttaggtatacaatcttaattaatttacactataggtcttgtaacaattaaaatttcacatcaaa 5100462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29390897 - 29390810
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||||||||||  ||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  29390897 cttttaatttttatttaattatatttgggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 29390810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29640387 - 29640300
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  29640387 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggtttgtaacaattaaaatttcacatcaaa 29640300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34858416 - 34858503
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  34858416 cttttaatttttatttaattatatttacgtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 34858503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 9592710 - 9592578
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||     |||||| ||||| |||||||||||||||||       |||||  |||| |||    
T  9592710 ttaattatatttaggtgttcaatcttaattaatttacaccacaggactgacttagaacaattaaaattttacatcaaatttctttcatctgaatgtcctt 9592611  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  9592610 aaatttatcagttatattcataaaatttattcc 9592578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 15421253 - 15421121
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  15421253 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 15421154  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  15421153 aaatttatcagttatattcataaaatttattcc 15421121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 19665863 - 19665731
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||| ||| |||||||||||||||||||||||||||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  19665863 ttaattaaatttaggtgttcaatcttaattaatttgcactacaggaccgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 19665764  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  19665763 aaatttatcagttatattcataaaatttattcc 19665731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 20545313 - 20545445
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  20545313 ttaattatatttaggtgttcaatcttaattaatttacactacaggactagcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 20545412  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  20545413 aaatttatcagttatattcataaaatttattcc 20545445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 27019236 - 27019368
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  27019236 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttatttcatctgaatgtcctt 27019335  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  27019336 aaatttatcagttatattcataaaatttattcc 27019368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 34654250 - 34654188
Alignment:
Q  113 attcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||| |||||||||||||||||||| | || ||||| ||||||||||||||||    
T  34654250 attcatcacttacactcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 34654188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 37939604 - 37939736
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  | ||||||    
T  37939604 ttaattatatttaggtgttcaatcttaattaatttacactacatgactagcttagaacaattaaaatttcacatcaaatttctttcatctgaacgttctt 37939703  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  37939704 aaatttatcagttatattcataaaatttattcc 37939736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 3035841 - 3035756
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| ||| || |||||||| ||||||||    
T  3035841 tttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaataactaaaatttcacatcaaa 3035756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 8525724 - 8525639
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||| || || | | ||| |||||| |||||||| ||||||||    
T  8525724 tttaatttttatttaattatatttaggtatacaatcttaattaatttacaatatagggcttgtaacaattaaaatttcacatcaaa 8525639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 37271327 - 37271196
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact----tataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||||||    || ||||| ||||||||  |||||||       |||||  |||| |||    
T  37271327 ttaattatatttacgtgttcaatcttaattaatttacactacaagactgacttagaacaattaaaatttcgcatcaaatttctttcatctgaatgtcctt 37271228  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  37271227 aaatttatcagttatattcataaaatttcttc 37271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3033215 - 3033302
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| ||||   |||||||||||||||| ||||| |    || |||||| |||||||||||||||||    
T  3033215 cttttaatttttatttaattatatttaggtaaacaatcttaattaatttacactatagagtttgtaacaactaaaattttacatcaaa 3033302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15524258 - 15524341
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacat 84  Q
    |||||||||||||||| |||||||| |||| | |||||||||||||||| ||||| ||   ||||||||| |||||||| ||||    
T  15524258 cttttaatttttatttgattatattgaggtatacaatcttaattaatttacactataaagtttataacaattaaaatttcacat 15524341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29389121 - 29389208
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||||||||||  ||| | |||||||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  29389121 cttttaatttttatttaattatatttgggtatacaatcttaattaatttacactatagggtttgtaacaattaaaatttcacatcaaa 29389208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29639470 - 29639557
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| |  ||||||||||||||| ||||| | | ||| |||||| |||| ||| ||||||||    
T  29639470 cttttaatttttatttaattatatttaggtatataatcttaattaatttacactatagggcttgtaacaattaaagtttcacatcaaa 29639557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 823946 - 824078
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| | ||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  823946 ttaattatatttaagtgttcaatcttaattaatttacactacaggactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtactt 824045  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  824046 aaatttatcagttatattcataaaatttattcc 824078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 12500310 - 12500178
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       ||||   |||| |||    
T  12500310 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatccgaatgtcctt 12500211  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  12500210 aaatttatcagttatattcataaaatttattcc 12500178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 11985558 - 11985427
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     | |||| ||||| |||||||| ||||||||       |||||  || | |||    
T  11985558 ttaattatatttaggtgttcaatcttaattaatttacactacagaactggcttagaacaattaaaatttcacatcaaatttatttcatctgaatttcctt 11985459  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  11985458 aaatttatcagttatattcataaaatttcttc 11985427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 7180774 - 7180851
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  7180774 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaa 7180851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 19503939 - 19503905
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaattt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  19503939 ttaattatattaaggtgttcaatcttaattaattt 19503905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 37250321 - 37250403
Alignment:
Q  6 aatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||||| ||||   |||| ||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  37250321 aatttttatttaattatatttaggtaaacaattttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 37250403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 39589342 - 39589210
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||| |||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  39589342 ttaattatatttaggttttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctaaatgtcctt 39589243  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| || | ||| ||||||||||||| ||||    
T  39589242 aaatttattagttatattcataaaatttattcc 39589210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 13304561 - 13304692
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||||||| |||||| || |||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  13304561 ttaattatatttaggtgttcaatcttaactaatttacattacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 13304660  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| ||| |||||||||||||    
T  13304661 aaatttatcagttatatttataaaatttcttc 13304692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 30130060 - 30130186
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| || |||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  30130060 ttaattatatttag-tgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 30130158  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  30130159 aaatttatcagttatattcataaaattt 30130186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34663485 - 34663448
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatc 38  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34663485 cttttaatttttatttaattatattaagatgttcaatc 34663448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5102907 - 5102859
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||||||||||||||||||||||| |||| |  |||||||||||||||    
T  5102907 cttttaatttttatttaattatatttaggtatataatcttaattaattt 5102859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 42611368 - 42611445
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| |||| |||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||    
T  42611368 ttaattatatttaggttttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaa 42611445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 19665952 - 19665917
Alignment:
Q  22 tattaaggtgttcaatcttaattaatttgcactaca 57  Q
    |||| |||||||||||||||||||||||||||||||    
T  19665952 tatttaggtgttcaatcttaattaatttgcactaca 19665917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15527199 - 15527157
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaat 43  Q
    ||||||||||||||||||||||||| |||| | ||||||||||    
T  15527199 cttttaatttttatttaattatatttaggtatacaatcttaat 15527157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 31551261 - 31551303
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca 57  Q
    ||||||||||| | ||||||||||||||||||||| |||||||    
T  31551261 ttaattatatttatgtgttcaatcttaattaatttacactaca 31551303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 6719642 - 6719710
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||| |||| |||||||||||||||||| ||||| | | ||||  |||| |||||||| ||||||||    
T  6719642 tatatttaggtattcaatcttaattaatttacactaaaggtcttactacaattaaaatttcacatcaaa 6719710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 126; Significance: 5e-65; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 5764 - 5590
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  5764 cttttaatttttatttaattatattaaggtgttcaatcttatttaatttacactacaagacttataacaaataaaattttacatcaaatttttttcatct 5665  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  5664 ggatgtccttaaattcatcacttacattcataaaatttcttccattctaaaacccctaacgtgagaacaaaaaca 5590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 4931 - 5062
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| ||| |||| ||||||||       |||||  ||||||||    
T  4931 ttaattatatttaggtgttcaatcttaattaatttacactacatgactagcttaaaacaattaagatttcacatcaaatttctttcatctgaatgttctt 5030  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| || | |||||||||||||||||||||    
T  5031 aaatttattagttacattcataaaatttcttc 5062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 8e-64; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 34073077 - 34073249
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       |||||     
T  34073077 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaa-atttttcatctg 34073175  T
Q  102 gatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  34073176 gatgtccttaaattcatcacttacattcataaaatttcttccattctaaaaccccgaacgtgagaacaaaaaca 34073249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 52447436 - 52447606
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||| | |    
T  52447436 tttaattttttttt--ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttatttcatatgg 52447533  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  52447534 atgtccttaaattcatcatttacattcataaaatttcttccattctagaaccccgaacgtgagaacaaaaaca 52447606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 16664722 - 16664877
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| ||||||||||||    
T  16664722 tatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatc 16664821  T
Q  120 acttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    | |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  16664822 atttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 16664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 35824599 - 35824754
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||  ||||| ||||||||||||    
T  35824599 tatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatccagatgtccttaaattcatc 35824698  T
Q  120 acttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  35824699 acttacattcataaaatttcttccattccagaatcccgaacgtgagaacaaaaaca 35824754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 13534550 - 13534394
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  13534550 ttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 13534451  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||| | || ||||| ||| ||||||||||||    
T  13534450 cacttacattcataaaatttcttccattccagaaccccgaacgttagaacaaaaaca 13534394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 20787021 - 20786865
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  20787021 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcat 20786922  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     | |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  20786921 tatttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 20786865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 23419291 - 23419135
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||||||||||| |||||||||||    
T  23419291 ttatattaaggtgttcaatcttaattaatttacactacaagacttataataaataaaattttacatcaaatttctttcatctcgatgtccttaaattcat 23419192  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||| | ||||||||||||||||    
T  23419191 catttacattcataaaatttcttccattccagaacccccaacgtgagaacaaaaaca 23419135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 54919459 - 54919615
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||       ||||| ||||| |||||||||||    
T  54919459 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacagataaaattttacatcaaatttctttcatcttgatgtccttaaattcat 54919558  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  54919559 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 54919615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 31309686 - 31309860
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  31309686 cttttaatttttattaaattatattaaggtgttcgatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatct 31309785  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||||||||||||||||     | ||||| |||| ||||| ||||||||||||||||    
T  31309786 ggatgtccttaaattcatcacttacattcataaaaaaatattcattccaaaaccccgaacgtgagaacaaaaaca 31309860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 3035800 - 3035644
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  3035800 ttatattaaggtgttcaatcttaattaatttacactaaaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 3035701  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||  | || ||||| ||||||||||||||||    
T  3035700 catttacattcataaaatttcttccatttcagaaccccgaacgtgagaacaaaaaca 3035644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 4653033 - 4653189
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||       ||||| ||||| |||||||||||    
T  4653033 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacgtcaaatttctttcatctggatgtccttaaattcat 4653132  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||  | || ||||| ||||||||||||||||    
T  4653133 catttacattcataaaatttcttccatttcagaaccccgaacgtgagaacaaaaaca 4653189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 30827489 - 30827333
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||        |||| ||||| |||||||||||    
T  30827489 ttatattaaggtgttcaatcttaattgatttacactacaagacttataacaaataaaattttacatcaaatttcttttatctagatgtccttaaattcat 30827390  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||||| || ||||| |||||||||| |||||    
T  30827389 catttacattcataaaatttcttccattctagaaccccgaacgtgagaacataaaca 30827333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 46717770 - 46717926
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||||| |||||  ||||||||||    
T  46717770 ttatattaaggtgttcaatcttaattaatttacactacaagacttataataaataaaattttacatcaaatttctttcatctggatgtcattaaattcat 46717869  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  46717870 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 46717926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 8939463 - 8939633
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||       ||||| |    
T  8939463 tttaattttttttt--ttatattaaggtgttcaatcttaattaatttacactataatacttataacaaataaaattttacatcaaatttctttcatctgg 8939560  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| | || ||||| ||| ||||||||||||    
T  8939561 atgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaacgtaagaacaaaaaca 8939633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 17361205 - 17361358
Alignment:
Q  22 tattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcac 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||  |||| |||||||||||||     
T  17361205 tattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcatcat 17361304  T
Q  122 ttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||||||||||||||| | || ||| | ||||||||||||||||    
T  17361305 ttacattcataaaatttcttccattccagaaccccaaacgtgagaacaaaaaca 17361358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 20354061 - 20353905
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||       ||||| |||||  ||||||||||    
T  20354061 ttatattaagatgttcaatcttaattaatttacactacaagacttataacaaataaaatttaacaacaaatttctttcatctggatgtctttaaattcat 20353962  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  20353961 catttacattcataaaatttcttccattccaaaaccccgaacgtgagaacaaaaaca 20353905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 49873796 - 49873950
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  49873796 ttatgttaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 49873895  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaa 173  Q
    || |||||||||||||||||||| ||||| | || |||||  |||||||||||||    
T  49873896 catttacattcataaaatttctttcattccagaaacccgaatgtgagaacaaaaa 49873950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 50496196 - 50496016
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa---tcttaattaatttgcactacaagacttataacaaataaaattttacatcaa-----annnn 92  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||||| |||||||||||||||||||||||||||||||||||||              
T  50496196 cttttaatttttatttaattatattaaggtgttcgaatatcttaattaatttacactacaagacttataacaaataaaattttacatcaatttttttttt 50496097  T
Q  93 nnncatctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaa 173  Q
       ||||| ||||| |||||||||||| ||||||||||||||||||| ||||||| |||| ||||| ||||||||||||||    
T  50496096 cttcatctggatgtccttaaattcatcgcttacattcataaaatttcatccattccaaaaccccgaacgtgagaacaaaaa 50496016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 23933541 - 23933385
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||       ||| | ||||| |||||||||||    
T  23933541 ttatattaaggtgttcaatcttaattaatttataccacaagacttataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcat 23933442  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||| |||||||| ||||||||| | || ||||| | ||||||||||||||    
T  23933441 cacttacatttataaaattccttccattccagaaccccgaacatgagaacaaaaaca 23933385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 31292586 - 31292434
Alignment:
Q  21 atattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatca 120  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||       ||||| ||||| |||||||||||||    
T  31292586 atattaaggtgttcaatcctaattaatttacactacaagacttataacaaataaatttttacatcaaatttctttcatctggatgtccttaaattcatca 31292487  T
Q  121 cttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaa 173  Q
     |||||||||| ||||||||| ||||| |||| ||||| |||||||| |||||    
T  31292486 tttacattcattaaatttctttcattccaaaaccccgaacgtgagaaaaaaaa 31292434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 49970210 - 49970054
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||| ||||||||||||||||||| |||||| |||||||||| |||||| ||||||||||||||||||||       ||||| ||||| |||||||||||    
T  49970210 ttattttaaggtgttcaatcttaaataatttacactacaagatttataaaaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 49970111  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||| ||||||||| |||||||||||| | || ||||| ||||||||||||||||    
T  49970110 catttatattcataaattttcttccattccagaaccccgaacgtgagaacaaaaaca 49970054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 27962428 - 27962274
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||  |||||| |||||||||||||||        |||| ||| | |||||||||||    
T  27962428 ttatattaaggtattcaatcttaattaatttacactgcaagactta--acaaatcaaattttacatcaaatttcttttatctggatatccttaaattcat 27962331  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||| ||||| | || ||||| ||||||||||||||||    
T  27962330 catttacattcataaaatttctttcattccagaaccccgaacgtgagaacaaaaaca 27962274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 41041427 - 41041358
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  41041427 ttatattaaggtgttcaatcttaattaatttacactacaagatttataacaaataaaattttacatcaaa 41041358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43590430 - 43590517
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | ||||| |||||| |||||||| ||||||||    
T  43590430 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactataggacttgtaacaattaaaatttaacatcaaa 43590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 20786221 - 20786353
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaa----gacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  20786221 ttaattatatttaggtgttcaatcttaattaatttgcactacaagaccgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 20786320  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  20786321 aaatttatcagttatattcataaaatttattcc 20786353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38623541 - 38623455
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaa 87  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| ||| ||| |||||| |||||||| |||||||    
T  38623541 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactataaggcttgtaacaattaaaatttcacatcaa 38623455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 7487383 - 7487473
Alignment:
Q  57 aagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcacttacattcataaaatttcttccattc 147  Q
    |||| |||||||||||||||||| ||||||||       ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  7487383 aagatttataacaaataaaatttcacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattc 7487473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 43594209 - 43594124
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  43594209 tttaatttttatttaattatatttaggtgtacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 43594124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31624601 - 31624514
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| || || | ||||| |||||| |||||||| ||||||||    
T  31624601 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacattataggacttgtaacaattaaaatttcacatcaaa 31624514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 35045137 - 35045216
Alignment:
Q  96 catctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||| | || ||||| | ||| ||||||||||    
T  35045137 catctagatgtccttaaattcatcacttacattcataaaatttcttccattccagaaccccgaacatgataacaaaaaca 35045216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 54920317 - 54920185
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  54920317 ttaattatatttaggtgttcaatcttaattaatttacactacaagaccggcttaaaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 54920218  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  54920217 aaatttatcagttatattcataaaatttattcc 54920185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 7487314 - 7487367
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaat 72  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  7487314 ttatattaagatgttcaatcttaattaatttacactacaagacttataacaaat 7487367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 35825463 - 35825332
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  35825463 ttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 35825364  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  35825363 aaatttatcagttatattcataaaatttcttc 35825332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 46718636 - 46718505
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  46718636 ttaattatattcaggtgttcaatcttaattaatttacactacatgactggcttaaaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 46718537  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  46718536 aaatttatcagttatattcataaaatttcttc 46718505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8081129 - 8081042
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||| |||||||| |||| | ||||||| |||||||| ||||| | |  ||||||||| |||||||||||||||||    
T  8081129 cttttaatttttatttgattatatttaggtatacaatcttgattaatttacactatagggtttataacaattaaaattttacatcaaa 8081042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10659086 - 10658999
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  10659086 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggtttgtaacaattaaaatttcacatcaaa 10658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10873231 - 10873144
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  10873231 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggtttgtaacaattaaaatttcacatcaaa 10873144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19869856 - 19869943
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  19869856 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggtttgtaacaactaaaatttcacatcaaa 19869943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49645921 - 49646008
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| ||||   |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  49645921 cttttaatttttatttaattatatttaggtagacaatcttaattaatttacactatatggcttttaacaattaaaatttcacatcaaa 49646008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 4653890 - 4653758
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagac----ttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||    ||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  4653890 ttaattatatttaggtgttcaatcttaattaatttacactacaggacttggttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 4653791  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  4653790 aaatttatcagttatattcataaaatttattcc 4653758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 20342469 - 20342601
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  20342469 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttatttcatctgaatgtcctt 20342568  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  20342569 aaatttatcagttatattcataaaatttattcc 20342601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 20353194 - 20353326
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  20353194 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttttttcatctgaatgtcctt 20353293  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  20353294 aaatttatcagttatattcataaaatttattcc 20353326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 52448307 - 52448175
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  52448307 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 52448208  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  52448207 aaatttatcagttatattcataaaatttattcc 52448175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 17362020 - 17361893
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  17362020 ttaattatatttaggtgttcaatcttaattaatttacactataggattggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 17361921  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||||||| |||||||||||||    
T  17361920 aaatttatcacttatattcataaaattt 17361893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31623313 - 31623400
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||| |||||||||| | || | |||||||||||||||| | ||| | ||||| |||||| |||||||| ||||||||    
T  31623313 cttttaatttttatataattatatttatgtatacaatcttaattaatttacgctataggacttgtaacaattaaaatttcacatcaaa 31623400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 48952926 - 48953013
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||| ||||||||||||||||| |||| | |||| ||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  48952926 cttttaaattttatttaattatatttaggtatacaatattaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 48953013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50792619 - 50792532
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | |  | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  50792619 cttttaatttttatttaattatatttatgcatacaatcttaattaatttacactatatggcttgtaacaattaaaatttcacatcaaa 50792532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51943615 - 51943528
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||| |||| | |||||||||||||||| ||||| | | |||  ||||| |||||||| ||||||||    
T  51943615 cttttaattttaatttaattatatttaggtatacaatcttaattaatttacactataggtcttgaaacaattaaaatttcacatcaaa 51943528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 24577838 - 24577752
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||| |||| |||| | |||||||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  24577838 ttttaatttttatttaattttatttaggtatacaatcttaattaatttacactatagggtttgtaacaattaaaatttcacatcaaa 24577752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 27958611 - 27958743
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  27958611 ttaattatatttaggtgttcaatcttaattaatttacactaaaggactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 27958710  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| || | ||| ||||||||||||||||||    
T  27958711 aaatttataaattatattcataaaatttcttcc 27958743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 23932675 - 23932806
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| |||||  ||||||| ||||||||       || ||  |||| |||    
T  23932675 ttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaataaaaatttcacatcaaatttctttcagctgaatgtcctt 23932774  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  23932775 aaatttatcagttatattcataaaatttcttc 23932806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 30112805 - 30112890
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| |||| | |||| ||||||||||| ||| | | | ||| |||||| |||||||| ||||||||    
T  30112805 tttaatttttatttaattatatttaggtatacaattttaattaatttacaccatagggcttgtaacaattaaaatttcacatcaaa 30112890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 31291814 - 31291945
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  31291814 ttaattatatttaggtgttcaatcttaattaatttacactaaaggactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 31291913  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||  |||| ||| |||||||||||||||||    
T  31291914 aaatctatcagttatattcataaaatttcttc 31291945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 34073932 - 34073801
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| | ||||||||||||||||||||| |||||||  |    |||| ||||| |||||||  ||||||||       |||||  |||| |||    
T  34073932 ttaattatatttatgtgttcaatcttaattaatttacactacataactagcttagaacaattaaaattacacatcaaatttctttcatctgaatgtcctt 34073833  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  34073832 aaatttatcagttacattcataaaatttcttc 34073801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 35045888 - 35045757
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    |||||||| || ||||||||||||||| ||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  35045888 ttaattatgtttaggtgttcaatcttagttaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttatttcatctgaatgtcctt 35045789  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  35045788 aaatttatcagttatattcataaaatttcttc 35045757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 49874663 - 49874532
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| |  || |||||||||||||||||       |||||  |||| |||    
T  49874663 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagattaattaaaattttacatcaaatttctttcatctgaatgtcctt 49874564  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||| | |||| ||| |||||||||||||||||    
T  49874563 aaaattatcagttatattcataaaatttcttc 49874532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 7488184 - 7488107
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||    
T  7488184 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaa 7488107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19871163 - 19871115
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  19871163 cttttaatttttatttaattatatttaggtatgcaatcttaattaattt 19871115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30114317 - 30114269
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  30114317 cttttaatttttatttaattatatttaggtatacaatcttaattaattt 30114269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 50495387 - 50495464
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  50495387 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaa 50495464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 13533688 - 13533735
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  13533688 ttaattatatttaggtgttcaatcttaattaatttacactataagact 13533735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 26923734 - 26923655
Alignment:
Q  9 ttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| ||| || |||||||||| ||||||    
T  26923734 ttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaagaattaaaattttatatcaaa 26923655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40846723 - 40846636
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| ||||   ||||| |||||||||| ||||| |   ||| |||||| |||||||| ||||||||    
T  40846723 cttttaatttttatttaattatatttaggtacacaatcataattaatttacactatagagcttgtaacaattaaaatttcacatcaaa 40846636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 50790720 - 50790807
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| || |   |||||||||||||||| ||||| | | |||  ||||| |||||||| ||||||||    
T  50790720 cttttaatttttatttaattatatttagatacacaatcttaattaatttacactatagggcttgcaacaattaaaatttcacatcaaa 50790807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 7111694 - 7111740
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||    
T  7111694 tttaatttttatttaattatatttaggtatacaatcttaattaattt 7111740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 16665578 - 16665446
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||| ||||||||||||||||||| | ||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  16665578 ttaattatatttaggcgttcaatcttaattaatttacgctacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 16665479  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  16665478 aaatttatcagttatattcataaaatttattcc 16665446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 23418432 - 23418564
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||  ||||||||||||||||||||||| || |||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  23418432 ttaattatatctaggtgttcaatcttaattaatttacagtacatgacttgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 23418531  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  23418532 aaatttatcagttatattcataaaatttattcc 23418564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43940308 - 43940254
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcacta 55  Q
    ||||||||||||||||||||||||| || | | |||||||||||||||| |||||    
T  43940308 cttttaatttttatttaattatatttagatatacaatcttaattaatttacacta 43940254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 30824809 - 30824886
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  30824809 ttaattatatttaggcgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaa 30824886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 41040676 - 41040806
Alignment:
Q  17 aattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaa 112  Q
    ||||||||| ||||||||||| ||||||||||| ||||||| ||    |||| || || |||||||| ||||||||       |||||  |||| |||||    
T  41040676 aattatatttaggtgttcaattttaattaatttacactacaggactggcttagaataattaaaatttcacatcaaatttctttcatctgaatgtccttaa 41040775  T
Q  113 attcatcacttacattcataaaatttcttcc 143  Q
    ||| |||| ||| ||||||||||||| ||||    
T  41040776 atttatcagttatattcataaaatttattcc 41040806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 47650747 - 47650679
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||| |||| |||||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  47650747 tatatttaggtattcaatcttaattaatttacactataggtcttgtaacaattaaaatttcacatcaaa 47650679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 55450519 - 55450596
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  55450519 ttaataatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaa 55450596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 9368019 - 9368058
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcact 54  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  9368019 ttaattatatttaggtgttcaatcttaattaatttacact 9368058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 20786132 - 20786167
Alignment:
Q  22 tattaaggtgttcaatcttaattaatttgcactaca 57  Q
    |||| |||||||||||||||||||||||||||||||    
T  20786132 tatttaggtgttcaatcttaattaatttgcactaca 20786167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 26918274 - 26918356
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| |||| | ||||||||||||   | ||||| | | ||| |||||| |||||||| ||||||||    
T  26918274 tttaatttttatttaattatatttaggtatacaatcttaatta---tacactatatggcttgtaacaattaaaatttcacatcaaa 26918356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 7113758 - 7113705
Alignment:
Q  35 aatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||| ||||| | ||| | |||||| |||||||||||||||||    
T  7113758 aatcttaattaattttcactataggacatgtaacaattaaaattttacatcaaa 7113705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14270026 - 14269978
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||||||||||||||||||||||| |  | | ||||||||||||||||    
T  14270026 cttttaatttttatttaattatatttaaatatacaatcttaattaattt 14269978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 55451003 - 55450955
Alignment:
Q  123 tacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaa 171  Q
    ||||||||||||||||||||||||| | || ||| | ||||||||||||    
T  55451003 tacattcataaaatttcttccattccagaacccccaacgtgagaacaaa 55450955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 3754880 - 3754703
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa---tcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnnca 97  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||| |||||||||||||||||||||||||||||       ||    
T  3754880 cttttaatttttatttaattatattaaggtgttcaaatatcttaattaatttacactacaaaacttataacaaataaaattttacatcaaatttctttca 3754781  T
Q  98 tctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  3754780 tctcgatgtccttaaattcatcacttacattcataaaatttcttccattccaaaatcccgaacgtgagaacaaaaaca 3754703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 27551591 - 27551417
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  27551591 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaattttttccatct 27551492  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||| |  |||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  27551491 ggatctctttaaattcatcacttacattcataaaatttcttccactctaaaaccccgaacgtgagaacaaaaaca 27551417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 3851723 - 3851546
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa---tcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnnca 97  Q
    ||||||||||||||||||||||||||||||||||||   || |||||||||| ||||||||||||||||||||||||||||||||||||||       ||    
T  3851723 cttttaatttttatttaattatattaaggtgttcaaatatcataattaatttacactacaagacttataacaaataaaattttacatcaaatttatttca 3851624  T
Q  98 tctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  3851623 tctggatgtccttaaattcatcacttacattcataaaatttcttccattccaaaaccccgaacgtgagaacaaaaaca 3851546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 42080796 - 42080619
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa---tcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnnca 97  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||    
T  42080796 cttttaatttttatttaattatattaaggtgttcaaatatcttaattaatttacactacaagacttataacaaataaaattttacatcaaacttctttca 42080697  T
Q  98 tctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| ||||| |||||||||||||||||||||||||||||||||| ||||  |||| ||||| | ||||||||||||||    
T  42080696 tctggatgtccttaaattcatcacttacattcataaaatttctttcatttcaaaaccccgaacatgagaacaaaaaca 42080619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 39775098 - 39774923
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa---tcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnnca 97  Q
    ||||||||||||||||||||||||||||||| ||||   ||||||||||||| |||| |||||||||||||||||||||||||||||||||       ||    
T  39775098 cttttaatttttatttaattatattaaggtgctcaaatatcttaattaatttacactgcaagacttataacaaataaaattttacatcaaa--tttttca 39775001  T
Q  98 tctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  39775000 tctggatgtccttaaattcatcacttacattcataaaatttcttccattccaaaaccccgaacgtgagaacaaaaaca 39774923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 6644699 - 6644873
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    |||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  6644699 cttttagtttttatttaattatattaaggttttaaattttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatct 6644798  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||||||||||||||||||||||| ||||   || ||||| ||||||||||||||||    
T  6644799 ggatgtccttaaattcatcacttacattcataaaatttcttcaattccggaaccccgaacgtgagaacaaaaaca 6644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 3906868 - 3906712
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||  |||| |||||||||||    
T  3906868 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcat 3906769  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||||| || ||||| ||||| ||||||||||    
T  3906768 catttacattcataaaatttcttccattctagaaccccgaacgtgaaaacaaaaaca 3906712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 2292275 - 2292121
Alignment:
Q  21 atattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatca 120  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||       ||||| ||||| |||||||||||||    
T  2292275 atattaaggtgttcaatcttaattaatttacaccacaagacttataataaataaaattttacatcaaatttctttcatctggatgtccttaaattcatca 2292176  T
Q  121 cttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  2292175 gttacattcataaaatttcttccattccaaaaccccgaacgtgagaacaaaaaca 2292121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 37725474 - 37725322
Alignment:
Q  23 attaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcact 122  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||       ||||| ||||| ||||||||||||| |    
T  37725474 attaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcatt 37725375  T
Q  123 tacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  37725374 tacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 37725322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 4738224 - 4738059
Alignment:
Q  10 tttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttct 109  Q
    |||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||| | ||||| ||    
T  4738224 tttatttttttatgttaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatttggatgtcct 4738125  T
Q  110 taaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||| |||||||||||||||||||||||||| | || | ||| ||||||||||||||||    
T  4738124 taaattcatcatttacattcataaaatttcttccattccagaacctcgaacgtgagaacaaaaaca 4738059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 15152630 - 15152786
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||  ||||| |||||||||||    
T  15152630 ttatgttaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatcaggatgtccttaaattcat 15152729  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||||||| |||| | || ||||| ||||||||||||||||    
T  15152730 catttacattcataaaatttcttctattccagaaccccgaacgtgagaacaaaaaca 15152786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 25223531 - 25223687
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  25223531 ttatattaaggtgttcaatcttaattaatttactctacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 25223630  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||| ||||||||||||| |||| | || ||||| ||||||||||||||||    
T  25223631 catttacatttataaaatttcttcgattccagaaccccgaacgtgagaacaaaaaca 25223687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 15399041 - 15399196
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       || || ||||| ||||||||||||    
T  15399041 tatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcaactggatgtccttaaattcatc 15399140  T
Q  120 acttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||||| ||||||||||| | || |||||  |||||||||||||||    
T  15399141 acttacattcataaaacttcttccattccagaaccccgaatgtgagaacaaaaaca 15399196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 14006040 - 14005921
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  14006040 ttatattaaagtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 14005941  T
Q  119 cacttacattcataaaattt 138  Q
    || |||||||||||||||||    
T  14005940 catttacattcataaaattt 14005921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 38282228 - 38282081
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  38282228 ttatattaaggtgttcaatcttaattaa---------caagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 38282138  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  38282137 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 38282081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 77559 - 77423
Alignment:
Q  39 ttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcacttacattcataaaattt 138  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||       ||||| ||||| ||||||||||||| |||||||| ||||||||    
T  77559 ttaattaatttacactacatgacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcgtaaaattt 77460  T
Q  139 cttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||| |||| | || ||||| ||||||||||||||||    
T  77459 tttctattccagaaccccgaacgtgagaacaaaaaca 77423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 28391777 - 28391662
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    |||||||||||||||||||| || |||||| ||| ||||||||||||||||||||||||||||||||||       ||||| ||| | ||||||||||||    
T  28391777 tatattaaggtgttcaatctaaactaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatctggatctccttaaattcatc 28391678  T
Q  120 acttacattcataaaa 135  Q
    ||||||||||||||||    
T  28391677 acttacattcataaaa 28391662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33178857 - 33178944
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| ||||| ||| ||| |||||| |||||||||||||||||    
T  33178857 cttttaatttttatttaattatatttatgtatacaatcttaattaatttacactataaggcttgtaacaattaaaattttacatcaaa 33178944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 2291412 - 2291543
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||||||||| |||||||| ||||||||       |||||  |||| |||    
T  2291412 ttaattatatttaggtgttcaatcttaattaatttacactacaggattgacttataacaattaaaatttcacatcaaattcctttcatctgaatgtcctt 2291511  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  2291512 aaatttatcagttatattcataaaatttcttc 2291543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18248584 - 18248497
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  18248584 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 18248497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36600833 - 36600920
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  36600833 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatatggcttgtaacaattaaaatttcacatcaaa 36600920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 38281380 - 38281512
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagac----ttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||    ||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  38281380 ttaattatatttaggtgttcaatcttaattaatttgcactacaggactggtttaaaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 38281479  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  38281480 aaatttatcagttatattcataaaatttattcc 38281512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 15399910 - 15399779
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  15399910 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttttttcatctgaatgtcctt 15399811  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  15399810 aaatttatcagttatattcataaaatttcttc 15399779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6319433 - 6319520
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  6319433 cttttaattttaatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 6319520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6322343 - 6322256
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| | ||||||    
T  6322343 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcatatcaaa 6322256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14454565 - 14454478
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| || | | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  14454565 cttttaatttttatttaattatatttagatatacaatcttaattaatttacactatatggcttgtaacaattaaaatttcacatcaaa 14454478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21191764 - 21191677
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||| ||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  21191764 cttttaatttttatttaattatatttaggtatacaattttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 21191677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24520421 - 24520334
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||| ||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  24520421 cttttaatttttatttaattatatttaggtatacaatctgaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 24520334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33182772 - 33182685
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| |  ||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  33182772 cttttaatttttatttaattatatttaggtatataatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 33182685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33853081 - 33853168
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| | |   |||||| ||| |||||||| ||||||||    
T  33853081 cttttaatttttaattaattatatttaggtgttcaatcttaattaatttacaccatatagcttatatcaattaaaatttcacatcaaa 33853168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38932441 - 38932354
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||  | |||||||||||||||| ||||| | |  || |||||| |||||||||||||||||    
T  38932441 cttttaatttttatttaattatatttaggcatacaatcttaattaatttacactatagggtttgtaacaattaaaattttacatcaaa 38932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 76751 - 76881
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact--tataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaa 112  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||   | ||||| |||||||| ||||||||       |||||  |||| |||||    
T  76751 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaa 76850  T
Q  113 attcatcacttacattcataaaatttcttcc 143  Q
    ||| |||| ||| ||||||||||||| ||||    
T  76851 atttatcagttatattcataaaatttattcc 76881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 37724624 - 37724756
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  37724624 ttaattatatttaggtgttcaatcttaattaatttacactacaggattgccttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 37724723  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  37724724 aaatttatcagttatattcataaaatttattcc 37724756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 27550727 - 27550858
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||| || |||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  27550727 ttaattatatttaggtgttcattcctaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 27550826  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  27550827 aaatttatcagttacattcataaaatttcttc 27550858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 36602932 - 36602848
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||||||||  ||| |  ||||||||||||||| ||||| ||| |||||||||| |||||||| ||||||||    
T  36602932 tttaatttttatttaattatattt-ggtatagaatcttaattaatttacactataaggcttataacaattaaaatttcacatcaaa 36602848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 39774300 - 39774377
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| |||||||||||||| ||||||||    
T  39774300 ttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaaataaaatttcacatcaaa 39774377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 39967051 - 39966979
Alignment:
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||| | || ||||| | ||||||||||||||    
T  39967051 atgtccttaaattcatcatttacattcataaaatttcttcaattccagaaccccgaacttgagaacaaaaaca 39966979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 1054255 - 1054386
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  1054255 ttaattatatttaggtgttcaatcttaattaatttacactaaatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 1054354  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
     |||| |||| ||| |||||||||||||||||    
T  1054355 gaatttatcagttatattcataaaatttcttc 1054386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 15153485 - 15153354
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| | ||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  15153485 ttaattatatttaagtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 15153386  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| ||||||| |||||||||    
T  15153385 aaatttatcagttatattcatagaatttcttc 15153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 28391066 - 28391193
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||||||||||||||  |||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  28391066 ttaattatatttaggtgttcaatcttaattaatttatactacatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 28391165  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  28391166 aaatttatcagttatattcataaaattt 28391193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 3850913 - 3850990
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  3850913 ttaattatatttaggtgttcaatcttaattaatttacactacatgactcgcttaaaacaattaaaatttcacatcaaa 3850990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 18246589 - 18246674
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||| ||||| ||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  18246589 ttttaattttaattta-ttatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 18246674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 39966278 - 39966410
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||| |||||||||||||||||| ||||||| ||    |||| ||||| |||||||  ||||||||       |||||  |||| |||    
T  39966278 ttaattatatttaggtattcaatcttaattaatttacactacaggactcgcttagaacaattaaaattacacatcaaatttatttcatctgaatgtcctt 39966377  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  39966378 aaatttatcagttatattcataaaatttattcc 39966410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 40495404 - 40495330
Alignment:
Q  14 tttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||  ||||| |||||||||||||||||  |||| | | |||||||||| |||||||| ||||||||    
T  40495404 tttaattatatccaggtggtcaatcttaattaatttaaactatagggcttataacaattaaaatttcacatcaaa 40495330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 3906023 - 3906070
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| ||||    
T  3906023 ttaattatatttaggtgttcaattttaattaatttacactacaggact 3906070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 6645998 - 6645951
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||| ||||    
T  6645998 ttaattatatttaggtgttcaatcttaattaatttacacaacaggact 6645951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 39160000 - 39160079
Alignment:
Q  9 ttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||| |||| | ||||||||||||||||  | || | | ||| |||||| |||||||| ||||||||    
T  39160000 ttttatttaattatatttaggtatacaatcttaattaatttatattatagggcttgtaacaattaaaatttcacatcaaa 39160079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 39209194 - 39209115
Alignment:
Q  9 ttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||| |||| | ||||||||||||||||  | || | | ||| |||||| |||||||| ||||||||    
T  39209194 ttttatttaattatatttaggtatacaatcttaattaatttatattatagggcttgtaacaattaaaatttcacatcaaa 39209115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 3754053 - 3754130
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| || ||||| |||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||    
T  3754053 ttaattatatttagatgttcgatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaa 3754130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 40517982 - 40517926
Alignment:
Q  14 tttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaa 70  Q
    |||||||||||  ||||| |||||||||||||||||  || ||| ||||||||||||    
T  40517982 tttaattatatctaggtggtcaatcttaattaatttaaaccacaggacttataacaa 40517926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 42645403 - 42645573
Alignment:
Q  5 taatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||| |||    
T  42645403 taatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaatacttataacaaataaaattttacagcaaattttcttcatctggat 42645502  T
Q  105 gttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  42645503 gtccttaaattcatcacttacattcataaaatttcttccattctaaaaccccgaacttgagaacaaaaaca 42645573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 28085890 - 28085716
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||       |||||    
T  28085890 cttttaatttttatttaattattttaaggtgttcaatcttaattaatttacactatatgacttataacaaataaaattttacatcaaatttctttcatct 28085791  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  28085790 ggatgtccttaaattcatcacttacattcataaaatttcttccattccaaaaccccgaacgtgagaacaaaaaca 28085716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 30556678 - 30556505
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  30556678 cttttaatttttatttaattatattaagaagttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaa-ttttttcatct 30556580  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  30556579 ggatgtccttaaattcatcacttacattcataaaatttcttccattctagaaccccgaacgtgagaacaaaaaca 30556505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 30105823 - 30105997
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||        ||||    
T  30105823 cttttaatttttatttaattattttaaggtgttcaatcttaattaatttacactacatgacttataacaaataaaattttacatcaaatttctttaatct 30105922  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
      |||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||    
T  30105923 gaatgtccttaaattcatcacttacattcataaaatttctttcattccaaaaccccgaacgtgagaacaaaaaca 30105997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 4622724 - 4622559
Alignment:
Q  10 tttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttct 109  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||       ||||| ||||||||    
T  4622724 tttatttttttatattaaggtgttcaatcttaattaatttacactacaagactgataacaaataaaattttacatcaaatttctttcatctggatgttct 4622625  T
Q  110 taaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  4622624 taaattcatcatttacattcataaaatttcttccattctagaaccccgaacgtgagaacaaaaaca 4622559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 43695150 - 43694983
Alignment:
Q  8 tttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgtt 107  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||| |||||     
T  43695150 tttttatttttttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttttttcatctggatgtc 43695051  T
Q  108 cttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||    
T  43695050 cttaaattcatcacttacattcataaaatttcttccattatagaaccccgaacgtgagaacaaaaaca 43694983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 175
Target Start/End: Original strand, 3850116 - 3850284
Alignment:
Q  7 atttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgt 106  Q
    |||||| ||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||| |||||    
T  3850116 atttttttttatatatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatctggatgt 3850215  T
Q  107 tcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||||||||||||||||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  3850216 ccttaaattcatcacttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 3850284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 15883393 - 15883237
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  15883393 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 15883294  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||| |||||||||||||||| || ||||| ||||||||||||||||    
T  15883293 catttacattcatagaatttcttccattctagaaccccgaacgtgagaacaaaaaca 15883237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 23347135 - 23346979
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  23347135 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 23347036  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||| |||||||||||| | |||||||| ||||||||||||||||    
T  23347035 catttacattcataaagtttcttccattccagaatcccgaacgtgagaacaaaaaca 23346979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 3705102 - 3704946
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  3705102 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 3705003  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||| ||||| | || ||||| ||||||||||||||||    
T  3705002 catttacattcataaaatttctttcattccagaaccccgaacgtgagaacaaaaaca 3704946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 13141277 - 13141121
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  13141277 ttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtacttaaattcat 13141178  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||||||||||||| |||| | || ||||| ||||||||||||||||    
T  13141177 cacttacattcataaaatttcttctattccagaaccccgaacgtgagaacaaaaaca 13141121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 16095994 - 16096166
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||       ||||| |    
T  16095994 tttaatttttttttttttatattaaggtgttcaatcttaattaatttacactacaagacttatgacaaataaaattttacatcaaatttctttcatctgg 16096093  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||| | || ||||| ||||||||||||||||    
T  16096094 atgtgcttaaattcatcatttacatttataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 16096166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 25583573 - 25583417
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||       ||||| ||||| |||||||||||    
T  25583573 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacataaaatttctttcatctagatgtccttaaattcat 25583474  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  25583473 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 25583417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 45409204 - 45409032
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||       ||| |    
T  45409204 cttttaatttttatttaattatattaaggtgatcaatcttaattaatttacactacaagacttataactaataaaattttacatc-aacttttttcattt 45409106  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||| ||  ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  45409105 ggatg-tccaaaaatcatcacttacattcataaaatttcttccattctaaaaccccgaacgtgagaacaaaaaca 45409032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 276833 - 276989
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  276833 ttatattaaggtgttcaatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 276932  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||| |||||||||||| | || ||||| ||||||||||||||||    
T  276933 catttacattcataaattttcttccattccagaaccccgaacgtgagaacaaaaaca 276989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 639016 - 638860
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  639016 ttatattaaggtgttcaatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 638917  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||| |||||||||||| | || ||||| ||||||||||||||||    
T  638916 catttacattcataaattttcttccattccagaaccccgaacgtgagaacaaaaaca 638860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 824822 - 824666
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  824822 ttatattaaggtgttcaatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 824723  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||| |||||||||||| | || ||||| ||||||||||||||||    
T  824722 catttacattcataaattttcttccattccagaaccccgaacgtgagaacaaaaaca 824666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 44256194 - 44256348
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  44256194 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttttttcatctagatgtccttaaattcat 44256293  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaa 173  Q
    || |||||||||||||||||||||| ||||| || ||| | |||||||| |||||    
T  44256294 catttacattcataaaatttcttcctttctagaaccccaaacgtgagaataaaaa 44256348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 2082246 - 2082090
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  2082246 ttatattaaggtgttcaatcttaattaatttacactacaaaacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 2082147  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| || ||||||| |||||    
T  2082146 catttacattcataaaatttcttccattccagaaccccgaacgcgagaacataaaca 2082090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 17948465 - 17948309
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| ||||||||| |    
T  17948465 ttatatgaaagtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcgt 17948366  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  17948365 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 17948309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 27912495 - 27912651
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||       ||||| ||| | |||||||||||    
T  27912495 ttatattaaggtgttcaatcttaattaatttacactacaagacttatgacaaataaaattttacatcaaatttatttcatctagatatccttaaattcat 27912594  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| |||||||| |||||||    
T  27912595 catttacattcataaaatttcttccattcaagaaccccgaacgtgagaataaaaaca 27912651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 27958914 - 27959070
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||       ||||| ||| | |||||||||||    
T  27958914 ttatattaaggtgttcaatcttaattaatttacactacaagacttatgacaaataaaattttacatcaaatttatttcatctagatatccttaaattcat 27959013  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| |||||||| |||||||    
T  27959014 catttacattcataaaatttcttccattcaagaaccccgaacgtgagaataaaaaca 27959070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 42735695 - 42735851
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||       ||||| ||||| |||||||||||    
T  42735695 ttatattaaggtgttcaatcttaattaatctacaccacaagacttataacagataaaattttacatcaaatttctttcatctggatgtccttaaattcat 42735794  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||| |||||||||||||||||| | || ||||| ||||||||||||||||    
T  42735795 cacttacatttataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 42735851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 41545064 - 41545229
Alignment:
Q  10 tttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttct 109  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||       ||||| ||||| ||    
T  41545064 tttatttttttatattaaggtgttcaatcttaattaatttacactataagatttataacaaataaaattttacatcaaatttctttcatctggatgtcct 41545163  T
Q  110 taaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||| |||||||||||||||||||||||||| | ||   ||| ||||||||||||||||    
T  41545164 taaattcatcatttacattcataaaatttcttccattccagaactacgaacgtgagaacaaaaaca 41545229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 6093425 - 6093581
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||        || | ||||| |||||||||||    
T  6093425 ttatattaaggtgttcaatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttcttttatttggatgtccttaaattcat 6093524  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || || || ||||||||||||||||    
T  6093525 catttacattcataaaatttcttccattccagaacccagaacgtgagaacaaaaaca 6093581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 39858112 - 39858267
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    ||||||||||||||||||||||| |||||| ||| |||| ||||||| |||||||||||||||||||||       ||||| ||||| ||||||||||||    
T  39858112 tatattaaggtgttcaatcttaactaatttacaccacaaaacttatagcaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatc 39858211  T
Q  120 acttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||||||||||||||||  | || ||||| ||||||||||||||||    
T  39858212 acttacattcataaaatttcttccatttcagaaccccgaacgtgagaacaaaaaca 39858267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 18955345 - 18955501
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||  |||| ||| |||||||    
T  18955345 ttatattaaggttttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttgaattcat 18955444  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||||||| |||| | || |||||  |||||||||||||||    
T  18955445 catttacattcataaaatttcttctattccagaaccccgaaagtgagaacaaaaaca 18955501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18089421 - 18089334
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18089421 cttttaatttttatttaattatattaaggtgctcaatcataattaatttacactacaagacttataacaaataaaattttacatcaaa 18089334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 38577018 - 38576901
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||       ||||||||||| |||||||||||    
T  38577018 ttatattaaggtgttcaatcataattaatttacactagaagacttataacaaat-aaattttacatcaaatttctttcatctcgatgtccttaaattcat 38576920  T
Q  119 cacttacattcataaaatt 137  Q
    |||||||||||||||||||    
T  38576919 cacttacattcataaaatt 38576901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 40304325 - 40304191
Alignment:
Q  44 taatttgcactacaagacttataacaa---ataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcacttacattcataaaatttct 140  Q
    |||||| ||| ||||||||||||||||   ||||||||||||||||||       ||||| ||||| |||||||||||||||||||||||||||||||||    
T  40304325 taatttacaccacaagacttataacaacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttct 40304226  T
Q  141 tccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    | ||||||| || || || ||||||||||||||||    
T  40304225 ttcattctagaaccctgaacgtgagaacaaaaaca 40304191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 5586950 - 5587089
Alignment:
Q  8 tttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgtt 107  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||| | | |||||||||| |||||||| |||||||        ||| | |||||     
T  5586950 tttttatttaattatatttaggtgttcaatcttaattaatttacactatagggcttataacaattaaaatttcacatcaattttctttcatttagatgtc 5587049  T
Q  108 cttaaattcatcacttacattcataaaatttcttccattc 147  Q
    ||||||| ||||  ||||||||||||||||||||| ||||    
T  5587050 cttaaatccatcggttacattcataaaatttcttcaattc 5587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26951217 - 26951130
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | ||||| |||||| |||||||| ||||||||    
T  26951217 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactataggacttgtaacaattaaaatttcacatcaaa 26951130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 45408338 - 45408469
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact----tataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||    || ||||| |||||||| ||||||||       |||||  |||| |||    
T  45408338 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcatagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 45408437  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  45408438 aaatttatcagttacattcataaaatttcttc 45408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43129486 - 43129569
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacat 84  Q
    |||||||| |||||||||||||||| |||| | |||||||||||||||||||||| | ||||| |||||| |||||||| ||||    
T  43129486 cttttaatgtttatttaattatatttaggtatgcaatcttaattaatttgcactatatgacttgtaacaattaaaatttcacat 43129569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 42646283 - 42646152
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||| |||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  42646283 ttaattatatttaggtgttcaatcctaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 42646184  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  42646183 aaatttatcagttacattcataaaatttcttc 42646152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 43694273 - 43694404
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  43694273 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 43694372  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  43694373 aaatttatcagttatattcataaaatttcttc 43694404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15825839 - 15825752
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||| ||||||||||||||||||| | || | |||||||||||||||| ||||| | ||||| |||||| |||||||| ||||||||    
T  15825839 ctttttatttttatttaattatatttatgtatgcaatcttaattaatttacactatatgacttgtaacaattaaaatttcacatcaaa 15825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19143125 - 19143038
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||| ||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  19143125 cttttaatttttaattaattatatttaggtatacaatcttaattaatttacactatatggcttgtaacaattaaaatttcacatcaaa 19143038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26920499 - 26920412
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||| |||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  26920499 cttttaatttatatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 26920412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 638157 - 638289
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  638157 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 638256  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  638257 aaatttatcagttatattcataaaatttattcc 638289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 15882547 - 15882679
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  15882547 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttcattcatctgaatgtcctt 15882646  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  15882647 aaatttatcagttaaattcataaaatttattcc 15882679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 23346276 - 23346408
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||||||||| |||||||| ||||||||       || ||  |||| |||    
T  23346276 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttataacaattaaaatttcacatcaaatttctttcacctgaatgtcctt 23346375  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  23346376 aaatttatcagttatattcataaaatttattcc 23346408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 26949959 - 26950091
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  26949959 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 26950058  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  26950059 aaatttatcagttatattcataaaatttattcc 26950091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 38060354 - 38060486
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  38060354 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttacaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 38060453  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  38060454 aaatttatcagttatattcataaaatttattcc 38060486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 6095761 - 6095630
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||||| ||||||       |||||  |||| |||    
T  6095761 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttaaaacaattaaaattttagatcaaatttctttcatctgaatgtcctt 6095662  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| ||||||| |||||||||    
T  6095661 aaatttatcagttatattcatacaatttcttc 6095630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 13140421 - 13140548
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||||||||||| || |||||||     |||||| ||||| |||||||| ||||||||       ||||| ||||| |||    
T  13140421 ttaattatatttaggtgttcaatcttaattaacttacactacaggactgacttagaacaattaaaatttcacatcaaatttctttcatctggatgtcctt 13140520  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  13140521 aaatttatcagttatattcataaaattt 13140548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 30555795 - 30555926
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| || |||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  30555795 ttaattatatttagttgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 30555894  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  30555895 aaatttatcagttatattcataaaatttcttc 30555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 39858946 - 39858815
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  39858946 ttaattatatttaggtgttcaatcttaattaatttacactaaatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 39858847  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  39858846 aaatttatcagttatattcataaaatttcttc 39858815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 42736542 - 42736411
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  ||||  ||    
T  42736542 ttaattatatttaggtgttcaatcttaattaatttacactacataattgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcttt 42736443  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  42736442 aaatttatcagttatattcataaaatttcttc 42736411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 41545795 - 41545669
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  41545795 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 41545696  T
Q  111 aaattcatcacttacattcataaaatt 137  Q
    ||||| |||| ||| ||||||||||||    
T  41545695 aaattaatcagttatattcataaaatt 41545669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 277689 - 277560
Alignment:
Q  18 attatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaa 113  Q
    |||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| ||||||    
T  277689 attatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaa 277590  T
Q  114 ttcatcacttacattcataaaatttcttcc 143  Q
    || |||| ||| ||||||||||||| ||||    
T  277589 tttatcagttatattcataaaatttattcc 277560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 823966 - 824095
Alignment:
Q  18 attatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaa 113  Q
    |||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| ||||||    
T  823966 attatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaa 824065  T
Q  114 ttcatcacttacattcataaaatttcttcc 143  Q
    || |||| ||| ||||||||||||| ||||    
T  824066 tttatcagttatattcataaaatttattcc 824095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23625805 - 23625892
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||| |||||||||| |||| | |||||||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  23625805 cttttaatttttatctaattatatttaggtatacaatcttaattaatttacactatagggtttgtaacaattaaaatttcacatcaaa 23625892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35019383 - 35019470
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| ||||| |   ||| |||||| |||||||| ||||||||    
T  35019383 cttttaatttttatttaattatatttaagtatacaatcttaattaatttacactatagtgcttgtaacaattaaaatttcacatcaaa 35019470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38364674 - 38364587
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | |  || ||| || |||||||| ||||||||    
T  38364674 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggtttgtaataattaaaatttcacatcaaa 38364587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 18956409 - 18956277
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaa----gacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    |||||||||||  |||||||||||||||||||||| ||| ||||    |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  18956409 ttaattatattttggtgttcaatcttaattaatttacacgacaagactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 18956310  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  18956309 aaatttatcagttatattcataaaatttattcc 18956277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 27913352 - 27913220
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| | ||||||       |||||  |||| |||    
T  27913352 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcatatcaaatttctttcatctgaatgtcctt 27913253  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  27913252 aaatttatcagttatattcataaaatttattcc 27913220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 27959771 - 27959639
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| | ||||||       |||||  |||| |||    
T  27959771 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcatatcaaatttctttcatctgaatgtcctt 27959672  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  27959671 aaatttatcagttatattcataaaatttattcc 27959639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29726551 - 29726473
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattt 79  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||| | | | ||| |||||| ||||||||    
T  29726551 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacacaatagggcttgtaacaattaaaattt 29726473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 44257050 - 44256918
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  44257050 ttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 44256951  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| | ||||||||||| ||||    
T  44256950 aaatttatcagttatactcataaaatttattcc 44256918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 40303477 - 40303604
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  40303477 ttaattatatttaggtgttcagtcttaattaatttacactacatgactagcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 40303576  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  40303577 aaatttatcagttatattcataaaattt 40303604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 40617454 - 40617323
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||| |||||||||||| || |||||||    |||| ||||| |||||||| | ||||||       |||||  |||| |||    
T  40617454 ttaattatatttaggtgttcaaccttaattaatttacattacaagactcgcttagaacaattaaaatttcaaatcaaatttctttcatctgaatgtcctt 40617355  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||||||||||||||| |||||    
T  40617354 aaatttatcagttacattcataaaatgtcttc 40617323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17981352 - 17981304
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  17981352 ctttttatttttaattaattatatttaggtgttcaatcttaattaattt 17981304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 18088644 - 18088721
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||    
T  18088644 ttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaa 18088721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31642951 - 31642903
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  31642951 cttttaattgttatttaattatattaaggtatacaatcttaattaattt 31642903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29725637 - 29725724
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| || || |   ||| ||| || |||||||||||||||||    
T  29725637 cttttaatttttatttaattatatttatgtatacaatcttaattaatttacattatagagcttgtaaaaattaaaattttacatcaaa 29725724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 3850984 - 3850853
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||     |||||| ||||  |||||||| ||||||||       |||||  | || |||    
T  3850984 ttaattatatttaggtgtttaatcttaattaatttacactacatgactgacttagaacatttaaaatttcacatcaaatttttttcatctgaaagtcctt 3850885  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  3850884 aaatttatcagttatattcataaaatttcttc 3850853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 16096628 - 16096551
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  16096628 ttaataatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaa 16096551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 36192387 - 36192310
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| | ||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  36192387 ttaattatatttaagtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaa 36192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 30111690 - 30111616
Alignment:
Q  18 attatattaaggtgttcaatcttaattaatttgcactacaag----acttataacaaataaaattttacatcaaa 88  Q
    |||||||| |||||||||||||||||||||||  |||||| |    ||||| ||||| |||||||| ||||||||    
T  30111690 attatatttaggtgttcaatcttaattaatttagactacatgactaacttagaacaattaaaatttcacatcaaa 30111616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 39068997 - 39069065
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||| |||| |||||||||||||||||| ||||| | | |||  ||||| |||||||| ||||||||    
T  39068997 tatatttaggtattcaatcttaattaatttacactataggtcttgcaacaattaaaatttcacatcaaa 39069065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 41671407 - 41671327
Alignment:
Q  8 tttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||| ||||||||||||| || | | |||||||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  41671407 ttttaatttaattatatttagatatacaatcttaattaatttacactataggttttgtaacaattaaaatttcacatcaaa 41671327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 5e-62; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 17968260 - 17968087
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  17968260 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaa-ttttttcatct 17968162  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||||    
T  17968161 ggatgtccttaaattcatcacttacattcataaaatttcttccattctaaaactcagaacgtgagaacaaaaaca 17968087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 23594513 - 23594338
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaa-annnnnnncatc 99  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||         |||     
T  23594513 cttttattttttatttaattatattaaggtgttcaatcttaagtaatttacactacaagacttataacaaataaaattttacatcaatttttttttcatg 23594414  T
Q  100 tcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  23594413 tggatgtccttaaattcatcacttacattcataaaatttcttccattctaaaaccccgaacgtgagaacaaaaaca 23594338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 30760039 - 30759862
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaa---annnnnnnca 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||           ||    
T  30760039 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaatttttttttttca 30759940  T
Q  98 tctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    | |  |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  30759939 tttgaatgtccttaaattcatcacttacattcataaaatttcttccattctaaaaccccgaacgtgagaacaaaaaca 30759862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 725458 - 725302
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||||||||||| |||||||||||    
T  725458 ttatattaaggtgttcaatcttaattaatttacactacaagacttataataaataaaattttacatcaaatttctttcatctcgatgtccttaaattcat 725359  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  725358 catttacattcataaaatttcttccattccaaaaccccgaacgtgagaacaaaaaca 725302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 46936228 - 46936053
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa-nnnnnnncatc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||         |||    
T  46936228 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttttttttatc 46936129  T
Q  100 tcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    | ||||||||||||||||||||||| ||| |||||||||||||||||| | || |||||  |||||||||||||||    
T  46936128 tggatgttcttaaattcatcacttatatttataaaatttcttccattcaagaaccccgaaagtgagaacaaaaaca 46936053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 47503661 - 47503838
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       |||||    
T  47503661 cttttaatttttatttaattatattaaggtattcaatcttaattaatttacactaaaagacttataacaaataaaattttacatcaaatttttttcatct 47503760  T
Q  101 cgatgttcttaaa---ttcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||   |||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47503761 ggatgtccttaaattcttcatcacttacttgcataaaatttcttccattctaaaaccccgaacgtgagaacaaaaaca 47503838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 28589536 - 28589366
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||| | |    
T  28589536 tttaattttttttt--ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatttgg 28589439  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  28589438 atgtccttaaattcatcatttacattcataaaatttcttccattccaaaaccccgaacgtgagaacaaaaaca 28589366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 16277495 - 16277339
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  16277495 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 16277396  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||||| || ||||| |||| |||||||||||    
T  16277395 catttacattcataaaatttcttccattctagaaccccgaacgtgggaacaaaaaca 16277339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 20120083 - 20120239
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  20120083 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 20120182  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  20120183 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 20120239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 41858490 - 41858318
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||      
T  41858490 tttaatttttctttttttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctgt 41858391  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  41858390 atgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 41858318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 44459228 - 44459072
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  44459228 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 44459129  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  44459128 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 44459072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 9663526 - 9663370
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  9663526 ttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 9663427  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||| | || ||||| ||| ||||||||||||    
T  9663426 cacttacattcataaaatttcttccattccagaaccccgaacgttagaacaaaaaca 9663370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 18994892 - 18994736
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||| |||||    
T  18994892 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgttcttaacttcat 18994793  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||| |||||||| | || ||||| ||||||||||||||||    
T  18994792 catttacattcataaaatttattccattccagaaccccgaacgtgagaacaaaaaca 18994736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 21815459 - 21815615
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||||| |||||  ||||||||||    
T  21815459 ttatattaaggtgttcaatcttaattaatttacactacaagacttataaaaaataaaattttacatcaaatttctttcatctggatgtctttaaattcat 21815558  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  21815559 catttacattcataaaatttcttccattctagaaccccgaacgtgagaacaaaaaca 21815615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 48683318 - 48683474
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  48683318 ttatattaaagtgttcaatcttaattaatttacactacaagacttgtaacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 48683417  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  48683418 catttacattcataaaatttcttccattctagaaccccgaacgtgagaacaaaaaca 48683474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 48952119 - 48951947
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||       |||||      
T  48952119 tttaatttttctttttttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttaaatcaaatttctttcatctgt 48952020  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  48952019 atgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 48951947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 47909312 - 47909157
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||       ||||| ||||| |||||||||||    
T  47909312 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacaacaaatttctttcatctggatgtccttaaattcat 47909213  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaac 174  Q
    || |||||||||||||||||||||||||| | || ||||| |||||||||||||||    
T  47909212 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaac 47909157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 4924998 - 4925154
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  4924998 ttatattaaggtgttcaatcttaattaatttagactacaagacttataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcat 4925097  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||||||| |||| | || ||||| ||||||||||||||||    
T  4925098 catttacattcataaaatttcttcaattccagaaccccgaacgtgagaacaaaaaca 4925154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 33246564 - 33246408
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  33246564 ttatattaaggtgttcaatcttaattaatttacactacaaaacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 33246465  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||| |||||||||||||||||||||||| || ||||| ||||| ||||||||||    
T  33246464 catttatattcataaaatttcttccattctagaaccccgaacgtgaaaacaaaaaca 33246408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 46555420 - 46555264
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  46555420 ttatattaaggtgttcaatcttaattaatttacattacaagacttatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 46555321  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  46555320 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 46555264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 3416079 - 3415924
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||||| ||||| ||||||||||||    
T  3416079 tatattaaggtgttcaatcttaattaatttacactacaagacttataaaaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatc 3415980  T
Q  120 acttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    | |||| ||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  3415979 atttactttcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 3415924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 48607556 - 48607400
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||       ||||| ||||| |||||||||||    
T  48607556 ttatattaaggtgttcaatcttaattaatttacaccacaagacttataacacatcaaattttacatcaaatttctttcatctggatgtccttaaattcat 48607457  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||||||||| |||||||| | || ||||| ||||||||||||||||    
T  48607456 cacttacattcataaaatttattccattccagaaccccgaacgtgagaacaaaaaca 48607400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 46000757 - 46000924
Alignment:
Q  8 tttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgtt 107  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||       ||||| |||||     
T  46000757 tttttatttttttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaagttttacatcaaatttctttcatctggatgtc 46000856  T
Q  108 cttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||||||||| |||| | || ||| | |||||||| |||||||    
T  46000857 cttaaattcatcacttacattcataaaatttcttcaattccagaaccccaaacgtgagaaaaaaaaca 46000924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 21729743 - 21729914
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||         ||||    
T  21729743 cttttaatttttatttaattattttaaggtgttcaatcttaattaatctacactacatgac-tataacaaataaaattttacatcaatttttttttatct 21729841  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaa 173  Q
     ||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||| | |||||| |||||    
T  21729842 ggatgtccttaaattcatcaattacattcataaaatttcttccattccaaaaccccgaacttgagaaaaaaaa 21729914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 40015612 - 40015456
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||| ||    
T  40015612 ttatattaaggtgctcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaatttat 40015513  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||  | ||||||||||||||||    
T  40015512 catttacattcataaaatttcttccattccagaaccctaaacgtgagaacaaaaaca 40015456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 44882811 - 44882967
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||       |||||  |||| |||||||||||    
T  44882811 ttatattaagatgttgaatcttaattaatttacactacaagtcttataacaaataaaattttacatcaaatttctttcatctaaatgtccttaaattcat 44882910  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||| ||||||| | || ||||| ||||||||||||||||    
T  44882911 catttacattcataaaatttcatccattccagaaccccgaacgtgagaacaaaaaca 44882967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 41336359 - 41336516
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||| ||    
T  41336359 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaatttat 41336458  T
Q  119 cacttacattcataaaa-tttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||| ||| |||||||  | || ||| | ||||||||||||||||    
T  41336459 catttacattcataaaatttttttccatttcagaaccccaaacgtgagaacaaaaaca 41336516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 44522770 - 44522703
Alignment:
Q  108 cttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  44522770 cttaaattcatcacttacattcataaaatttcttccactctaaaatcccgaacgtgagaacaaaaaca 44522703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 41289528 - 41289464
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacat 84  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  41289528 tatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacat 41289464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 596309 - 596222
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | ||||| |||||| |||||||| ||||||||    
T  596309 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactataggacttgtaacaattaaaatttcacatcaaa 596222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19064064 - 19064151
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||| ||||||||||| ||||| ||| ||| |||||| |||||||| ||||||||    
T  19064064 cttttaatttttatttaattatatttaggtatacaattttaattaatttacactataaggcttgtaacaattaaaatttcacatcaaa 19064151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37708294 - 37708207
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  37708294 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatatggcttgtaacaattaaaatttcacatcaaa 37708207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 16274340 - 16274467
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  16274340 ttaattatatttaggtgttcaatcttaattaatttacactacaagactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 16274439  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  16274440 aaatttatcagttatattcataaaattt 16274467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 43543136 - 43543221
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  43543136 tttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 43543221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 44521163 - 44521294
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| | ||| |||||||| ||||||||       |||||  |||| |||    
T  44521163 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagagcaattaaaatttcacatcaaatttctttcatctgaatgtcctt 44521262  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  44521263 aaatttatcagttacattcataaaatttcttc 44521294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 46935354 - 46935485
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  46935354 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgtcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 46935453  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||  |||||||||||||||||||||    
T  46935454 aaatttatctgttacattcataaaatttcttc 46935485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 41289225 - 41289355
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  41289225 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 41289324  T
Q  111 aaattcatcacttacattcataaaatttctt 141  Q
    || || |||| ||||||||||||||||||||    
T  41289325 aagtttatcagttacattcataaaatttctt 41289355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33982518 - 33982431
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||||| |||| |||| | |||||||||||||||| ||||| | ||||| |||||| ||| |||| ||||||||    
T  33982518 cttttaatttttatttaattgtatttaggtatacaatcttaattaatttacactataggacttgtaacaattaacatttcacatcaaa 33982431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38224484 - 38224571
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||| |||||||| |||| | ||||||||||||||||  |||| | ||||| |||||| |||||||| ||||||||    
T  38224484 cttttaatttttattttattatatttaggtctacaatcttaattaatttagactataggacttgtaacaattaaaatttcacatcaaa 38224571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41406084 - 41406171
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||  |||| | | ||| |||||| |||||||| ||||||||    
T  41406084 cttttaatttttatttaattatatttaggtatacaatcttaattaatttatactatagggcttgtaacaattaaaatttcacatcaaa 41406171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41408097 - 41408010
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||| |||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  41408097 cttttattttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 41408010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 41857721 - 41857846
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaa----gacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  41857721 ttaattatatttaggtgttcaatcttaattaatttacactacaagactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 41857820  T
Q  111 aaattcatcacttacattcataaaat 136  Q
    ||||| |||| ||| |||||||||||    
T  41857821 aaatttatcagttatattcataaaat 41857846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47254680 - 47254593
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  47254680 cttttaattttaatttaattatatttaggtatacaatcttaattaatttacactataggtcttgtaacaattaaaatttcacatcaaa 47254593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 3415223 - 3415353
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact--tataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaa 112  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||     ||||| |||||||| ||||||||       |||||  |||| |||||    
T  3415223 ttaattatatttaggtgttcaatcttaattaatttacactacaagactggctgaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaa 3415322  T
Q  113 attcatcacttacattcataaaatttcttcc 143  Q
    ||| |||| ||| ||||||||||||| ||||    
T  3415323 atttatcagttatattcataaaatttattcc 3415353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 20120939 - 20120807
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  20120939 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 20120840  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  20120839 aaatttatcagttatattcataaaatttattcc 20120807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 21816316 - 21816184
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  21816316 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 21816217  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  21816216 aaatttatcagttatattcataaaatttattcc 21816184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 41337218 - 41337086
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  41337218 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 41337119  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  41337118 aaatttatcagttatattcataaaatttattcc 41337086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 43545098 - 43545012
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||| ||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  43545098 ttttaattttaatttaattatatttaggtatacaatcttaattaatttacactatagggcttttaacaattaaaatttcacatcaaa 43545012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 5373610 - 5373741
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||    |||| ||||| |||||||| ||||||||       ||| |  |||| |||    
T  5373610 ttaattatatttaggtgttcaattttaattaatttacactacaagactggcttagaacaattaaaatttcacatcaaatttctttcatgtgaatgtcctt 5373709  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  5373710 aaatttatcagttatattcataaaatttcttc 5373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 17967379 - 17967506
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    || |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  17967379 ttaattatatttaggtgttcaatcctaattaatttacactacatgacaggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtgctt 17967478  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| |||||||||||||||||    
T  17967479 aaatttatcagttacattcataaaattt 17967506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 40014755 - 40014882
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  40014755 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 40014854  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  40014855 aaatttatcagttatattcataaaattt 40014882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 21736406 - 21736276
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactac----aagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||||||||||||||  |||||    | |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  21736406 ttaattatatttaggtgttcaatcttaattaatttagactacatgaatgacttagaacaattaaaatttcacatcaaatttctgtcatctaaatgtcctt 21736307  T
Q  111 aaattcatcacttacattcataaaatttctt 141  Q
    || || |||| ||||||||||||||||||||    
T  21736306 aagtttatcatttacattcataaaatttctt 21736276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 724600 - 724733
Alignment:
Q  14 tttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttct 109  Q
    |||||||||||  ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| ||    
T  724600 tttaattatatctaggtgttcaatcttaattaatttacactacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcct 724699  T
Q  110 taaattcatcacttacattcataaaatttcttcc 143  Q
    |||||| |||| ||| ||||||||||||| ||||    
T  724700 taaatttatcagttatattcataaaatttattcc 724733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1602328 - 1602242
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||| |||||||||||||| | ||   |||||||||||||||| ||||| ||| ||| |||||| |||||||||||||||||    
T  1602328 cttttaatttgtatttaattatatttatgtaaacaatcttaattaatttacactataag-cttgtaacaattaaaattttacatcaaa 1602242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 5374416 - 5374365
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaa 71  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  5374416 tatattaaggcgttcaatcttaattaatttacaccacaagacttataacaaa 5374365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33979512 - 33979599
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||| ||||||||||| |||| | |||||||||||||||| ||||| |  ||||  ||||| |||||||| ||||||||    
T  33979512 cttttaatttttaattaattatatttaggtatacaatcttaattaatttacactatataacttgcaacaattaaaatttcacatcaaa 33979599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 28588682 - 28588814
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  || | |||    
T  28588682 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatttcctt 28588781  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  28588782 aaatttatcagttatattcataaaatttattcc 28588814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 48684176 - 48684044
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||| | ||||||||||||||||||||||| ||| ||||||    |||| ||||| |||||||| ||||||||       ||||   |||| |||    
T  48684176 ttaattatacttaggtgttcaatcttaattaatttacacaacaagactgtcttagaacaattaaaatttcacatcaaatttctttcatccgaatgtcctt 48684077  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||||||||    
T  48684076 aaatttatcagttatattcataaaatttcttcc 48684044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 1599556 - 1599641
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||| ||||||||||||||||| |||| | |||||||||||||||| ||||  | | ||| |||||| |||||||| ||||||||    
T  1599556 tttaaattttatttaattatatttaggtatacaatcttaattaatttacactgtagggcttgtaacaattaaaatttcacatcaaa 1599641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 48606690 - 48606821
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||||     |||||| ||||| |||||||| ||||||||        ||||  |||| |||    
T  48606690 ttaattatatttaggtgttcaatcttaattaatttacattacaggactgacttagaacaattaaaatttgacatcaaatttcttttatctgaatgtcctt 48606789  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  48606790 aaatttatcagttatattcataaaatttcttc 48606821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47252113 - 47252161
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  47252113 cttttaatttttatttaattatatttaggtatacaatcttaattaattt 47252161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 586091 - 586004
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| |  ||||||||||||||| ||||| | |  |  |||||| |||||||| ||||||||    
T  586091 cttttaatttttatttaattatatttaggtatataatcttaattaatttacactatatggttcgtaacaattaaaatttcacatcaaa 586004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 4658169 - 4658216
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  4658169 ttaattatatttaggtgttcaatcttaattaatttacactacatgact 4658216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 9662664 - 9662711
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  9662664 ttaattatatttaggtgttcaatcttaattaatttacactataagact 9662711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28337556 - 28337627
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaat 72  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| ||||| || || | |||||||| |||||    
T  28337556 cttttaatttttaattaattatatttaggtattcaatcttaataaatttacattataggacttatatcaaat 28337627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42825751 - 42825838
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||| ||||||||||| ||||| | |  || |||||| |||||||| ||||||||    
T  42825751 cttttaatttttatttaattatatttatgtatacaatattaattaatttacactatagggtttgtaacaattaaaatttcacatcaaa 42825838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 8393323 - 8393277
Alignment:
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattcta 149  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||    
T  8393323 atgtccttaaagtcatcacatacattcataaaatttcttccattcta 8393277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 33245707 - 33245749
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  33245707 ttaattatatttaggtgttcaatcttaattaatttacactaca 33245749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 48951350 - 48951482
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  ||||  ||    
T  48951350 ttaattatatttaggtgttcagtcttaattaatttacactacatgactgccttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcatt 48951449  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  48951450 aaatttatcagttatattcataaaatttattcc 48951482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 8392536 - 8392667
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||| | ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| |||||||        |||||  |||| |||    
T  8392536 ttaattataattaggtgttcaatcttaattaatttacactacatgattggcttagaacaattaaaatttcacatcaactttatttcatctgaatgtcctt 8392635  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||  ||||||||||||| |||||||    
T  8392636 aaatttatcggttacattcataaactttcttc 8392667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 46160695 - 46160611
Alignment:
Q  6 aatttttatttaattatattaa--ggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||||| |  ||| | |||||||||||||||| || || | ||||| |||||| |||||||| ||||||||    
T  46160695 aatttttatttaattatatttataggtatacaatcttaattaatttacattatatgacttgtaacaattaaaatttcacatcaaa 46160611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42833928 - 42833840
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttc-aatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||| |||| | | ||||||||||||||| ||||| | | |||  ||||| |||||||| ||||||||    
T  42833928 cttttaattttaatttaattatatttaggtataccaatcttaattaatttacactatagggcttgaaacaattaaaatttcacatcaaa 42833840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 44458371 - 44458448
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| |||| |||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||    
T  44458371 ttaattatatttaggttttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaa 44458448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 44883658 - 44883618
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcacta 55  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  44883658 ttaattatatttaggtgttcaatcttaattaatttacacta 44883618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 46554564 - 46554604
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcacta 55  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  46554564 ttaattatatttaggtgttcaatcttaattaatttacacta 46554604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 10934308 - 10934343
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa 36  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10934308 cttttaatttttatttaattatatttaggtgttcaa 10934343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 30758328 - 30758375
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  30758328 ttaattatatttaggtgttcaatcctaattaatttacactacatgact 30758375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 30759204 - 30759285
Alignment:
Q  61 cttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcacttacattcataaaatttcttc 142  Q
    |||| ||||| |||||||| ||||||||       |||||  |||| |||||||| |||| |||||||||||||||||||||    
T  30759204 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttcttc 30759285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 102)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 30363667 - 30363493
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||    
T  30363667 cttttaatttttatttaattatattaagatgttcaatcttaattaatttgcactataagacttataacaaataaaattttacatcaaatttttttcatct 30363568  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| |||| |||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  30363567 ggatgtccttagattcatcaattacattcataaaatgtcttctattctaaaaccccgagcgtgagaacaaaaaca 30363493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 37181957 - 37181783
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  37181957 cttttaatttttatttaattatattaaggtgtttaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttttttcatct 37181858  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||| |||||||||||||||||||||||||||| ||||||  |||| ||||| ||||||||||||||||    
T  37181857 ggatgtccttgaattcatcacttacattcataaaatttcgtccatttcaaaaccccgaacgtgagaacaaaaaca 37181783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 53778358 - 53778184
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||       |||||    
T  53778358 cttttaatttttatttaattattttaaggtgttcaatcttaattaatttacactacatgagttataacaaataaaattttacattaaatttctttcatct 53778259  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  53778258 ggatgtccttaaattcatcacttacattcataaaatttcttccatttcaaaaccccgaacgtgagaacaaaaaca 53778184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 3892675 - 3892497
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa----nnnnnnnc 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||           |    
T  3892675 ctttaaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttttttttttc 3892576  T
Q  97 atctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||| | |||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  3892575 atctggatatccttaaattcatcacttacattcataaaatttctttcattctaaaaccccgaacgtgagaacaaaaaca 3892497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 16008865 - 16009022
Alignment:
Q  18 attatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattca 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| ||||||||||    
T  16008865 attatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattca 16008964  T
Q  118 tcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  16008965 tcatttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 16009022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 37220082 - 37219910
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||      
T  37220082 tttaatttttctttttttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctgt 37219983  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  37219982 atgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 37219910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 41101749 - 41101905
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  41101749 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 41101848  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  41101849 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 41101905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 50548468 - 50548296
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| |    
T  50548468 tttaatttttttttttttatattaaggtgttcaatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttctttcatctgg 50548369  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  50548368 atgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 50548296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 22428926 - 22428752
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||       |||||    
T  22428926 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttgtaacaaataaaattttacatcaaatttctttcatct 22428827  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| |||||||||||||||| ||||||||||||||||| ||||  | || |||||   ||||||||||||||    
T  22428826 ggatgtccttaaattcatcacttgcattcataaaatttcttacatttcagaaccccgaatctgagaacaaaaaca 22428752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 47912927 - 47912755
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctc 101  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||     
T  47912927 tttttatttttatttt-ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctg 47912829  T
Q  102 gatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| | ||||||||||||| |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  47912828 gatttccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 47912755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 4233048 - 4232892
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  4233048 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcat 4232949  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || | ||| ||||||||||||||||    
T  4232948 catttacattcataaaatttcttccattccagaacctcgaacgtgagaacaaaaaca 4232892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 16463997 - 16464153
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||||| |||||  ||||||||||    
T  16463997 ttatattaaggtgttcaatcttaattaatttacactacaagacttataaaaaataaaattttacatcaaatttctttcatctggatgtctttaaattcat 16464096  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  16464097 catttacattcataaaatttcttccattctagaaccccgaacgtgagaacaaaaaca 16464153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 45170075 - 45170229
Alignment:
Q  21 atattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatca 120  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||||    
T  45170075 atattaaggtgttcaatcttaattaatttatactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatca 45170174  T
Q  121 cttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  45170175 tttacattcataaaatttcttccattccagaaacccgaacgtgagaacaaaaaca 45170229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 18410294 - 18410450
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  18410294 ttatattaaggagttcaatcttaattaatttacactacaagacttatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 18410393  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  18410394 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 18410450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 27126288 - 27126444
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||       |||||  |||| |||||||||||    
T  27126288 ttatattaaggtgttcaatcttaattaatttaaactacaagacttataacaaataaaattttacatcaaatttttttcatctgaatgtccttaaattcat 27126387  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||||| || |||||  |||||||||||||||    
T  27126388 catttacattcataaaatttcttccattctagaaccccgaatgtgagaacaaaaaca 27126444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 27321086 - 27321242
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||  |||| |||||||||||    
T  27321086 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcat 27321185  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||| ||||| | || ||||| ||||||||||||||||    
T  27321186 catttacattcataaaatttctttcattccagaaccccgaacgtgagaacaaaaaca 27321242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 43338427 - 43338583
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||| ||||||| |||||||||    
T  43338427 ttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatcttgatgttcataaattcat 43338526  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||| | ||  ||||  |||||||||||||||    
T  43338527 cacttacattcataaaatttcttccattccagaactccgaatgtgagaacaaaaaca 43338583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 44843166 - 44843010
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||       ||||| ||||| |||||||||||    
T  44843166 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcat 44843067  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||||||| |||| | || ||||| ||||||||||||||||    
T  44843066 catttacattcataaaatttcttcaattccagaaccccgaacgtgagaacaaaaaca 44843010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 51722769 - 51722613
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||       ||||| ||||| |||||||||||    
T  51722769 ttatattaaggtgttcaatcttaattaatttacacaacaagacttataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcat 51722670  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||| ||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  51722669 cactttcattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 51722613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 13213523 - 13213696
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||       ||||| |    
T  13213523 tttaatttttttttttttatattaaggtgttcaatcttaattaatttacactacaagatttataacaaataaaattttacatcaaatttctttcatctag 13213622  T
Q  103 atgttcttaaattcatca-cttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || | |||||||||||||  |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  13213623 atatccttaaattcatcattttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 13213696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 37785515 - 37785668
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  37785515 ttatattaaagtgttcaatcttaattaatttacactacaagacttgtaacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 37785614  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaa 172  Q
    || |||||||||||||||||||||||||| | || ||||| |||||||||||||    
T  37785615 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaa 37785668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 11121679 - 11121835
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||       ||||| ||| | |||||||||||    
T  11121679 ttatattaaggtgttcaatcttaattaatttacactacaatacttatgacaaataaaattttacatcaaatttctttcatctagatctccttaaattcat 11121778  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||||| || ||||| |||||||| |||||||    
T  11121779 catttacattcataaaatttcttccattctagaaccccgaacgtgagaataaaaaca 11121835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 15084532 - 15084404
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  15084532 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 15084433  T
Q  119 cacttacattcataaaatttcttccattc 147  Q
    || ||||||||||||||||||||||||||    
T  15084432 catttacattcataaaatttcttccattc 15084404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 30043456 - 30043300
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  30043456 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 30043357  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||| ||||||||||||||| | || || || | ||||||||||||||    
T  30043356 catttacattcatgaaatttcttccattccagaaccctgaacatgagaacaaaaaca 30043300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 41698063 - 41697909
Alignment:
Q  21 atattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatca 120  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| ||||||||||||     
T  41698063 atattaaggtgttcaatcttgattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcg 41697964  T
Q  121 cttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||||||||||||||||||||||||| | ||  |||| ||||||||||||||||    
T  41697963 tttacattcataaaatttcttccattccagaactccgaacgtgagaacaaaaaca 41697909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 30440260 - 30440104
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  30440260 ttatattaaggcgttcaatcttaattaatttacacttcaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 30440161  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || |||||  |||| ||||||||||    
T  30440160 catttacattcataaaatttcttccattccagaaccccgaaagtgaaaacaaaaaca 30440104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 45053687 - 45053532
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||| | ||||||||||||    
T  45053687 tatattaaggtattcaatcctaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctagatctccttaaattcatc 45053588  T
Q  120 acttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    | |||||||||||||||||||||||||| | || ||||| |||||||| |||||||    
T  45053587 atttacattcataaaatttcttccattccagaaccccgaacgtgagaataaaaaca 45053532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 42826057 - 42826203
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||| || |||       |||||    
T  42826057 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagactcataataaataaaattttatattaaatttctttcatct 42826156  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattc 147  Q
      ||||  |||||||||||||||||||||||||||| ||||||||||    
T  42826157 gaatgtctttaaattcatcacttacattcataaaatatcttccattc 42826203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 27325628 - 27325472
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||| ||||||       ||||| ||||| |||||||||||    
T  27325628 ttatattaaggtgttcaatcttaattaatttacactacaacacttataaaaaatcaaattttaaatcaaatttctctcatctggatgtccttaaattcat 27325529  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || || || ||||||||||||||||    
T  27325528 catttacattcataaaatttcttccattccataaccctgaacgtgagaacaaaaaca 27325472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 27331865 - 27331709
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||| ||||||       ||||| ||||| |||||||||||    
T  27331865 ttatattaaggtgttcaatcttaattaatttacactacaacacttataaaaaatcaaattttaaatcaaatttctctcatctggatgtccttaaattcat 27331766  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || || || ||||||||||||||||    
T  27331765 catttacattcataaaatttcttccattccataaccctgaacgtgagaacaaaaaca 27331709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 55411258 - 55411427
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctc 101  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||| |||| || ||||||||||||||||||||||||||||||       |||       
T  55411258 ttttaattttaatttaattattttaaggtgttcagtcttaattaatttacactgcatgacttataacaaataaaattttacatcaaatttctttcat--- 55411354  T
Q  102 gatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||| |||||||||||||||||||||||||||||||| || |||| ||||  |||| ||||||||||||||||    
T  55411355 -atgtccttaaattcatcacttacattcataaaatttcatcaattccaaaactccgaacgtgagaacaaaaaca 55411427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 38235587 - 38235741
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    ||||||||| ||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||| |||       ||||| ||||| ||||||||||||    
T  38235587 tatattaagatgttcaatcttaactaatttacaccacaagacttataacaaatgaaattttacattaaatttctttcatctggatgtccttaaattcatc 38235686  T
Q  120 acttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||||||||||||||    
T  38235687 acttacattcataaaagttcttccattccagaa-cccgaacgtgagaacaaaaaca 38235741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 40423772 - 40423898
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |        ||||| ||||| ||||||||| |    
T  40423772 ttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcgagtttctttcatctggatgtccttaaattcct 40423871  T
Q  119 cacttacattcataaaatttcttccat 145  Q
    |||||||||||||||||||||||||||    
T  40423872 cacttacattcataaaatttcttccat 40423898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 23019881 - 23020022
Alignment:
Q  34 caatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcacttacattcataa 133  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||        || | ||||| ||||||||||||| ||||||||||||    
T  23019881 caatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttctttaatatggatgtacttaaattcatcatttacattcataa 23019980  T
Q  134 aatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||| | || ||||| ||||||||||||||||    
T  23019981 aatttcttccattccagaaccccgaacgtgagaacaaaaaca 23020022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 8851752 - 8851625
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||       ||||| ||| | |||||||||||    
T  8851752 ttatattaaggtgttcaatcttaattaatttacactacaagacttatgacaaataaaattttacatcaaatttctttcatctagatctccttaaattcat 8851653  T
Q  119 cacttacattcataaaatttcttccattc 147  Q
    || |||||||||| |||||||||||||||    
T  8851652 catttacattcat-aaatttcttccattc 8851625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 38696929 - 38697076
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| |      |||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  38696929 ttatattaaggtgttcaatcttaattaattttcacca------ttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 38697022  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaa 172  Q
    ||||||||||||||||||||||||||||| | ||  |||| |||||||||||||    
T  38697023 cacttacattcataaaatttcttccattccataactccgaacgtgagaacaaaa 38697076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 22604944 - 22605100
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagact--tataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattc 116  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||| |||||||||||||||       ||||   |||| |||||||||    
T  22604944 ttatatttaggtgttcaatcttaattaatttacactacaagacttatataacaaatgaaattttacatcaaatttctttcatccgaatgtccttaaattc 22605043  T
Q  117 atcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaa 173  Q
    |||| |||| ||||||||||||||||||||||| || ||| | | ||||||||||||    
T  22605044 atcatttactttcataaaatttcttccattctagaaccccaaacatgagaacaaaaa 22605100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 10827677 - 10827542
Alignment:
Q  38 cttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcacttacattcataaaatt 137  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||||| ||||| ||||||||||| || |||||||||||||||    
T  10827677 cttaattaatttacactacaagacttataataaataaaattttacatcaaatttctttcatctagatgtccttaaattcatgacatacattcataaaatt 10827578  T
Q  138 tcttccattctaaaatcccgagcgtgagaacaaaaa 173  Q
    ||||| |||| | || ||||| |||||||| |||||    
T  10827577 tcttctattccagaaccccgaacgtgagaaaaaaaa 10827542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 6175585 - 6175462
Alignment:
Q  52 actacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaa 151  Q
    ||||||||||||||||||||||||||||||||| |||       ||||| ||||| ||||||||||||| |||||||||||||||||||||||||| | |    
T  6175585 actacaagacttataacaaataaaattttacattaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttcttccattccaga 6175486  T
Q  152 atcccgagcgtgagaacaaaaaca 175  Q
    | ||| | |||||||| |||||||    
T  6175485 accccaaacgtgagaataaaaaca 6175462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 22732602 - 22732463
Alignment:
Q  8 tttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgtt 107  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||| | | |||||||||| |||||||| |||||||        ||| | |||||     
T  22732602 tttttatttaattatatttaggtgttcaatcttaattaatttacactatagggcttataacaattaaaatttcacatcaattttctttcatttagatgtc 22732503  T
Q  108 cttaaattcatcacttacattcataaaatttcttccattc 147  Q
    ||||||| ||||  ||||||||||||||||||||| ||||    
T  22732502 cttaaatccatcggttacattcataaaatttcttcaattc 22732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 2218116 - 2218181
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacat 84  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  2218116 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaatacaattttacat 2218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 2218922 - 2218794
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaat 114  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||| |||||||| ||||||||       |||||  |||| |||||||    
T  2218922 ttaattatatttaggtgttcaatcttaattaatttacactacaggacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaat 2218823  T
Q  115 tcatcacttacattcataaaatttcttcc 143  Q
    | |||| ||| ||||||||||||| ||||    
T  2218822 ttatcagttatattcataaaatttattcc 2218794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 40906241 - 40906349
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| ||| | |||||||||||    
T  40906241 ttatattaaggtgttcaaccttagttaatttacactataagacttataacaaataaaattttacatcaaatttctttcatctggatttccttaaattcat 40906340  T
Q  119 cacttacat 127  Q
    || ||||||    
T  40906341 catttacat 40906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 27239034 - 27238956
Alignment:
Q  3 tttaatttttatttaatt-atattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaatttt 80  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  27239034 tttaatttttattttttttatattaaggtgttcaatcttaattaatttacactacaagacttataataaataaaatttt 27238956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 37181106 - 37181237
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  37181106 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttttttcatctgaatgtcctt 37181205  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  37181206 aaatttatcagttacattcataaaatttcttc 37181237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 22605795 - 22605664
Alignment:
Q  16 taattatattaaggtgttcaatcttaattaatttgcactacaagac---ttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaa 112  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||   ||||||||| |||||||| ||||||||       |||||  |||| |||||    
T  22605795 taattatatttaggtgttcaatcttaattaatttacactacaggactggttataacaattaaaatttcacatcaaatttctttcatctgaatgtccttaa 22605696  T
Q  113 attcatcacttacattcataaaatttcttcca 144  Q
    ||| |||| ||| ||||||||||||| |||||    
T  22605695 atttatcagttatattcataaaatttattcca 22605664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39131890 - 39131803
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  39131890 cttttaatttttatttaattatatttaggtatgcaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 39131803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 27331035 - 27331167
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaa----gacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||    |||||| ||||| |||||||| ||||||||       |||||  ||||||||    
T  27331035 ttaattatatttaagtgttcaatcttaattaatttacactacaagactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 27331134  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  27331135 aaatttatcagttatattcataaaatttattcc 27331167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 18762868 - 18762737
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    |||| | ||| |||||||| ||||||||       |||||  |||| |||    
T  18762868 ttaattatatttaggtgttcaatcttaattaatttacactacaagaccggcttagagcaattaaaatttcacatcaaatttctttcatctgaatgtcctt 18762769  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  18762768 aaatttatcagttatattcataaaatttcttc 18762737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 31312743 - 31312874
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  31312743 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 31312842  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  31312843 aaatttatcagttatattcataaaatttcttc 31312874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 53845378 - 53845431
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaat 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  53845378 ttatattaaggtgttcaatcttaattaatttacactacaagacttaaaacaaat 53845431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 37786347 - 37786270
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaa----gacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    |||||| ||||| |||||||| ||||||||    
T  37786347 ttaattatatttaggtgttcaatcttaattaatttgcactacaagaccgacttagaacaattaaaatttcacatcaaa 37786270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36471743 - 36471656
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | ||||||||| |||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  36471743 cttttaatttttatttaattatatttaggtatacaatcttaagtaatttacactatagggcttgtaacaattaaaatttcacatcaaa 36471656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41889624 - 41889537
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| ||||   |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  41889624 cttttaatttttatttaattatatttaggtagacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 41889537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 42877140 - 42877223
Alignment:
Q  5 taatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  42877140 taatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 42877223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50938440 - 50938353
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  50938440 cttttaatttttatttaattatatttatgtatgcaatcttaattaatttacactatatggcttgtaacaattaaaatttcacatcaaa 50938353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 16464854 - 16464722
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  16464854 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 16464755  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  16464754 aaatttatcagttatattcataaaatttattcc 16464722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 27127113 - 27126981
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  27127113 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 27127014  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  27127013 aaatttatcagttatattcataaaatttattcc 27126981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 30042603 - 30042735
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  30042603 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 30042702  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  30042703 aaatttatcagttatattcataaaatttattcc 30042735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 44842310 - 44842442
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  44842310 ttaattatatttaggtgttcaatcttaattaatttacactacaggactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 44842409  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  44842410 aaatttatcagttatattcataaaatttattcc 44842442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 50610374 - 50610242
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  50610374 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 50610275  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  50610274 aaatttatcaattatattcataaaatttattcc 50610242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 16009724 - 16009597
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| || |||||||||||||||||||| ||||||| ||    |||| ||||| |||||||||||||||||       |||||  |||| |||    
T  16009724 ttaattatatttagatgttcaatcttaattaatttacactacaggactggcttagaacaattaaaattttacatcaaatttctttcatctgaatgtcctt 16009625  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  16009624 aaatttatcagttatattcataaaattt 16009597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 38236454 - 38236323
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  38236454 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgtcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 38236355  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||  ||| |||||||||||||||||    
T  38236354 aaatttatctgttatattcataaaatttcttc 38236323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 42164103 - 42164188
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||| || || | | ||| |||||| |||||||| ||||||||    
T  42164103 tttaatttttatttaattatatttaggtatacaatcttaattaatttacattatagggcttgtaacaattaaaatttcacatcaaa 42164188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 42826923 - 42826792
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| |||| |||       ||| |  |||| |||    
T  42826923 ttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacattaaatttccttcatatgaatgtcctt 42826824  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  42826823 aaatttatcagttacattcataaaatttcttc 42826792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2229371 - 2229286
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||  | | ||| |||||| |||||||| ||||||||    
T  2229371 cttttaatttttatttaattatatttaggtatgcaatcttaattaatttacact--atggcttgtaacaattaaaatttcacatcaaa 2229286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22977974 - 22978061
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| |||| |||||||| |||| | |||||||||||||||  ||||| | ||||| |||||| |||||||| ||||||||    
T  22977974 cttttaattttaattttattatatttaggtatacaatcttaattaattcacactatatgacttgtaacaattaaaatttcacatcaaa 22978061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39129196 - 39129283
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||| |||||||||||||||| |||| | |||||||||||||||| || || | | ||| |||||| ||||||||| |||||||    
T  39129196 cttttaatatttatttaattatatttaggtatacaatcttaattaatttacattatagggcttgtaacaattaaaattttgcatcaaa 39129283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 40907074 - 40906941
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaa-taaaattttacatcaaannnnnnncatctcgatgttct 109  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| |||||| |||||||| ||||||||       |||||  |||| ||    
T  40907074 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaaattaaaatttcacatcaaatttctttcatctgaatgtcct 40906975  T
Q  110 taaattcatcacttacattcataaaatttcttcc 143  Q
    |||||| |||| ||| ||||||||||||| ||||    
T  40906974 taaatttatcagttatattcataaaatttattcc 40906941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 48071872 - 48071959
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| ||||| | | ||| |||||  |||||||| ||||||||    
T  48071872 cttttaatttttatttaattatatttatgtatacaatcttaattaatttacactatagggcttgtaacagttaaaatttcacatcaaa 48071959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 8850896 - 8851028
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| | ||||||       |||||  |||| |||    
T  8850896 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcatatcaaaattttttcatctgaatgtcctt 8850995  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  8850996 aaatttatcagttatattcataaaatttattcc 8851028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 11122537 - 11122405
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| | ||||||       |||||  |||| |||    
T  11122537 ttaattatatttaggtgttcaatcttaattaatttacactacatgactagcttagaacaattaaaatttcatatcaaatttctttcatctgaatgtcctt 11122438  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  11122437 aaatttatcagttatattcataaaatttattcc 11122405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 41697208 - 41697340
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  ||||  ||    
T  41697208 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtattt 41697307  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  41697308 aaatttatcagttatattcataaaatttattcc 41697340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 18411151 - 18411024
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||||||||||||||  ||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  18411151 ttaattatatttaggtgttcaatcttaattaatttaaactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 18411052  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  18411051 aaatttatcagttatattcataaaattt 18411024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 30362715 - 30362842
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||| | ||||||| ||    |||| ||||| |||||||||||||||||       |||||  |||| |||    
T  30362715 ttaattatatttaggtgttcaatcttaattaatctacactacatgactggcttagaacaattaaaattttacatcaaatttctttcatctgaatgtcctt 30362814  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    | ||| |||| |||||||||||| ||||    
T  30362815 acatttatcagttacattcataacattt 30362842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 38697788 - 38697657
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  ||||  ||    
T  38697788 ttaattatattcaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtattt 38697689  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| | | |||||||||||||||||    
T  38697688 aaatttatcagtcatattcataaaatttcttc 38697657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 43862527 - 43862442
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| || | | |||||||||||||||| ||||| |   ||| |||||| |||||||| ||||||||    
T  43862527 tttaatttttatttaattatatttagatatacaatcttaattaatttacactatagagcttgtaacaattaaaatttcacatcaaa 43862442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36465746 - 36465794
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaattt 49  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  36465746 cttttaatttttatttaattatatttaggtatacaatcttaattaattt 36465794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 41888712 - 41888792
Alignment:
Q  8 tttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||| |||| | |||| ||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  41888712 tttttatttaattatatttaggtatccaattttaattaatttacactatacggcttgtaacaattaaaatttcacatcaaa 41888792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 45052831 - 45052908
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  45052831 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaa 45052908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 45170926 - 45170849
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  45170926 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaa 45170849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 53777480 - 53777610
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||| ||||||||||||||||||  ||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  53777480 ttaattatatttaggtattcaatcttaattaatttagactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 53777579  T
Q  111 aaattcatcacttacattcataaaatttctt 141  Q
    || || |||| ||||||||||||||||||||    
T  53777580 aagtttatcatttacattcataaaatttctt 53777610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 37786436 - 37786397
Alignment:
Q  22 tattaaggtgttcaatcttaattaatttgcactacaagac 61  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  37786436 tatttaggtgttcaatcttaattaatttgcactacaagac 37786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43359484 - 43359398
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| |||||  || ||| |||||| |||||||| ||| ||||    
T  43359484 cttttaatttttatttaattatatttatgtatacaatcttaattaatttacacta-taggcttgtaacaattaaaatttcacaccaaa 43359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 50935609 - 50935696
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | ||||| |||||||||| ||||| | |  || |||||  |||||||| ||||||||    
T  50935609 cttttaatttttatttaattatatttaggtatacaatcataattaatttacactatagggtttgtaacatctaaaatttcacatcaaa 50935696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 2218179 - 2218225
Alignment:
Q  129 cataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||||    
T  2218179 cataaaatttcttccattctagaaccccgaacgtgagaacaaaaaca 2218225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 37219314 - 37219446
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  ||||  ||    
T  37219314 ttaattatatttaggtgttcagtcttaattaatttccactacatgactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcatt 37219413  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  37219414 aaatttatcagttatattcataaaatttattcc 37219446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 41102606 - 41102476
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact--tataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaa 112  Q
    ||||||||||| || |||||||||||||||||||| ||||||| ||||   | ||||| |||||||| ||||||||       |||||  |||| |||||    
T  41102606 ttaattatatttagctgttcaatcttaattaatttacactacaggactgacagaacaattaaaatttcacatcaaatttgtttcatctgaatgtccttaa 41102507  T
Q  113 attcatcacttacattcataaaatttcttcc 143  Q
    ||| |||  ||| ||||||||||||| ||||    
T  41102506 atttatcggttatattcataaaatttattcc 41102476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43357994 - 43358048
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcacta 55  Q
    ||||||||| ||||||||||||||| |||| | |||||||||||||||| |||||    
T  43357994 cttttaattattatttaattatatttaggtatacaatcttaattaatttacacta 43358048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 4232037 - 4232164
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||    |||| ||||| ||||| || ||||||||       |||||  |||| |||    
T  4232037 ttaattatatttaggtgttcaatcttaattaatttacactagatgactggcttagaacaattaaaagttcacatcaaatttctttcatctgaatgtcctt 4232136  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  4232137 aaatttatcagttatattcataaaattt 4232164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 42879651 - 42879566
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| || | | || ||||| ||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  42879651 tttaatttttatttaattatatttagatatacagtcttagttaatttacactatagggcttgtaacaattaaaatttcacatcaaa 42879566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 43339292 - 43339165
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagac----ttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| | ||||||||||||||||||||| ||||||| |||    ||| ||||| |||||||| ||||||||       |||||  || | |||    
T  43339292 ttaattatatttatgtgttcaatcttaattaatttacactacaggactggtttagaacaattaaaatttcacatcaaatttctttcatctgaatatcctt 43339193  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  43339192 aaatttatcagttatattcataaaattt 43339165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 22428037 - 22428114
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||     |||||| ||||| |||||||| ||||||||    
T  22428037 ttaattatatttaggtgttcaatcttaattaatttacactgcaggactgacttagaacaattaaaatttcacatcaaa 22428114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 54409532 - 54409600
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||| |||| |||||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  54409532 tatatttaggtattcaatcttaattaatttacactataggtcttgtaacaattaaaatttcacatcaaa 54409600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 23020722 - 23020675
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||||| || |||| ||||    
T  23020722 ttaattatatttaggtgttcaatcttaattaatttacattacatgact 23020675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48073873 - 48073786
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||| ||||||||||||||||| |||| | || |||||||||||||  |||| | | ||| ||| || |||||||| ||||||||    
T  48073873 cttttaagttttatttaattatatttaggtatacattcttaattaatttaaactatagggcttgtaaaaattaaaatttcacatcaaa 48073786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22981320 - 22981266
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcacta 55  Q
    ||||||||||||||||||||||||| |||| | ||||| | |||||||| |||||    
T  22981320 cttttaatttttatttaattatatttaggtatacaatcattattaatttacacta 22981266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43860620 - 43860674
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcacta 55  Q
    |||||||||| ||||||||||| || |||| | |||||||||||||||| |||||    
T  43860620 cttttaatttatatttaattatttttaggtatacaatcttaattaatttacacta 43860674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 50547595 - 50547637
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca 57  Q
    ||||||||||| || |||||||||||||||||||| |||||||    
T  50547595 ttaattatatttagatgttcaatcttaattaatttacactaca 50547637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 52746429 - 52746561
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| || ||||||||||||||||||||  ||||||     |||||| ||||| |||||||| ||||||||       ||| |  |||| |||    
T  52746429 ttaattatatttagatgttcaatcttaattaatttatactacatgactgacttagaacaattaaaatttcacatcaaatttttttcatatgaatgtcctt 52746528  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  52746529 aaatttatcagttatattcataaaatttattcc 52746561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 55412100 - 55412018
Alignment:
Q  59 gacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatcacttacattcataaaatttctt 141  Q
    |||||| ||||| |||||||| ||||||||       |||||  |||| |||||||| |||| ||||||||||||||||||||    
T  55412100 gacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcatttacattcataaaatttctt 55412018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 32001129 - 32001061
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||| |||| |||||||||||||||||| ||||| | | |||  ||||| |||||||| ||||||||    
T  32001129 tatatttaggtattcaatcttaattaatttacactatatgtcttgcaacaattaaaatttcacatcaaa 32001061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 25655883 - 25656057
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||        |||||    
T  25655883 cttttaaattttatttaattatattaaggtgtttaatcttaattaatttacactacaagacttataacaaataaaattttacatcaattttttttcatct 25655982  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  25655983 ggatgtccttaaattcatcacttacattcataaaatttcttccattataaaaccccgaacgtgagaacaaaaaca 25656057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 48127825 - 48127981
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||| | ||||| |||||||||||    
T  48127825 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcat 48127924  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  48127925 catttacattcataaaatttcttccattctaaaaccccgaacgtgagaacaaaaaca 48127981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 12768270 - 12768447
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa---tcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnnca 97  Q
    |||||||||||||||||||||||||||| |||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||    
T  12768270 cttttaatttttatttaattatattaagatgttcaaatatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttca 12768369  T
Q  98 tctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||||| | ||||||||||||||    
T  12768370 tctggatgtccttaaattcatcacttacattcataaaatttattccattccaaaaccccgaacttgagaacaaaaaca 12768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 30302997 - 30302823
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||        ||||    
T  30302997 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagaattataacaaataaaattttaaatcaaatttatttaatct 30302898  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||||||||||||||||||| ||| |||| | || ||||| ||||||||||||||||    
T  30302897 ggatgtccttaaattcatcacttacattcataaaatttattcaattccataaccccgaacgtgagaacaaaaaca 30302823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 33704650 - 33704807
Alignment:
Q  18 attatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattca 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| ||||||||||    
T  33704650 attatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattca 33704749  T
Q  118 tcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  33704750 tcatttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 33704807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 29521883 - 29521727
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  29521883 ttatattaaggtgttcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 29521784  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  29521783 cacttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 29521727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 35954468 - 35954624
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  35954468 ttatattaaggtgttcaatcttaattaatttacaccataagacttataacaaataaaattttacatcaaatttctgtcatctggatgtacttaaattcat 35954567  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  35954568 cacttacattcataaaatttcttccattctagaaccccgaacgtgagaacaaaaaca 35954624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 29649668 - 29649522
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  29649668 cttttaacttttatttaattatattaagatgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatct 29649569  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattc 147  Q
     ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  29649568 tgatgtccttaaattcatcactaacattcataaaatttcttccattc 29649522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 33006436 - 33006262
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||       |||||    
T  33006436 cttttaatttttatttaattattgtaaggtgttcaatcttaattaatttacactacatgacttataacaaataaaattttgcatcaaatttctttcatct 33006337  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| || |||||| |||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  33006336 ggatgtcctcaaattcttcacttacattcataaaatttcttccatttcaaaaccccgaacgtgagaacaaaaaca 33006262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 14488785 - 14488624
Alignment:
Q  14 tttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaa 113  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| ||||||    
T  14488785 tttatttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaa 14488686  T
Q  114 ttcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||| |||||||||||||||||||| ||||| | || ||||| ||||||||||||||||    
T  14488685 ttcatcatttacattcataaaatttctttcattccagaaccccgaacgtgagaacaaaaaca 14488624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 24781115 - 24781271
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||| ||    
T  24781115 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattaat 24781214  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  24781215 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 24781271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 31030141 - 31030297
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||||| |||||||| ||    
T  31030141 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttatttcatctcgatgtccttaaatttat 31030240  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||||||| |||| | || ||||| ||||||||||||||||    
T  31030241 catttacattcataaaatttcttcaattccagaaccccgaacgtgagaacaaaaaca 31030297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 36307893 - 36308049
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  36307893 ttataataaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 36307992  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  36307993 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 36308049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 5326751 - 5326926
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactac-aagacttataacaaataaaattttacatcaaannnnnnncatc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||       ||||    
T  5326751 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaaagacttataacaaataaaattttacatcaaatttctttcatc 5326850  T
Q  100 tcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
      |||||  ||||||||||||||||||||||||||||||||| |||||  ||| ||| | ||||||||| ||||||    
T  5326851 cagatgtctttaaattcatcacttacattcataaaatttctttcattccgaaaccccaaccgtgagaaccaaaaca 5326926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 36730718 - 36730873
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||       ||||| ||||| ||||||||||||    
T  36730718 tatattaacgtgttcaatcttaattaatttacaccacaagacttataataaataaaattttacatcaaatttctttcatctggatgtccttaaattcatc 36730817  T
Q  120 acttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  36730818 acttacattcataaaatttcttccattccagaatcccgaacgtgagaacaaaaaca 36730873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 10772784 - 10772938
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  10772784 ttatattaaggtgttcaatcttaattaatttacactacaaaacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 10772883  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaa 173  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||    
T  10772884 catttacattcataaaatttcttccattcaagaaccccgaacgtgagaacaaaaa 10772938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 7152975 - 7153131
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  7152975 ttatattaaggtgttcaatcttaattaatttacactataagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 7153074  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||| |||||||||||| | || ||||| ||||||||||||||||    
T  7153075 catttacattcataaattttcttccattccagaaccccgaacgtgagaacaaaaaca 7153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 44512378 - 44512222
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  44512378 ttatattaaagtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 44512279  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||| |||||||||| || ||||| ||||| ||||||||||    
T  44512278 catttacattcataaaatttattccattctagaaccccgaacgtgaaaacaaaaaca 44512222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 46118270 - 46118443
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||        || |    
T  46118270 cttttaatttttatttaattatattaaggggttcaatcttaattaatttacactacaggacttataacaaataaaattttaaatcaaatttatttaattt 46118369  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||||||||||||||||||||||||||||||| |||||||| | || | ||| ||||||||||||||||    
T  46118370 ggatgtccttaaattcatcacttacattcataaaatttattccattccagaa-ctcgaacgtgagaacaaaaaca 46118443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 52404634 - 52404805
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||       ||| |    
T  52404634 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaacaaaattttacatcaaa-ttttatcattt 52404732  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||||| ||| ||| |||||||||||||||| ||||||||||||||| | || ||| | ||||||||||||||||    
T  52404733 ggatgtcctt-aatccatcacttacattcat-aaatttcttccattccagaaccccaaacgtgagaacaaaaaca 52404805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 30838667 - 30838598
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  30838667 ttatattaaggtgttcaatcttaattaatttacactacatgacttataacaaataaaattttacatcaaa 30838598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 51086826 - 51086937
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    ||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||  ||||| ||||||||||||    
T  51086826 tatattaaggcattcaatcttaattaatttacaccacaagacttataacaaataaaattttacatcaaatttctttcatccggatgtccttaaattcatc 51086925  T
Q  120 acttacattcat 131  Q
    || ||| |||||    
T  51086926 acctaccttcat 51086937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 30302108 - 30302239
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       ||| || |||| |||    
T  30302108 ttaattatatttaggtgttcaatcttaattaatttacactacatgattggcttagaacaattaaaatttcacatcaaatttctttcatttcaatgtcctt 30302207  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  30302208 aaatttatcaattacattcataaaatttcttc 30302239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23258981 - 23259065
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatc 85  Q
    ||||||||||||||||||||||||| ||||   |||||||||||||||| ||||| | ||||| |||||| ||||||||||||||    
T  23258981 cttttaatttttatttaattatatttaggtagacaatcttaattaatttacactatatgacttgtaacaattaaaattttacatc 23259065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44299214 - 44299301
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||  | ||||| |||||| |||||||| ||||||||    
T  44299214 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactgtaggacttgtaacaattaaaatttcacatcaaa 44299301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44300147 - 44300060
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  44300147 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatatggcttgtaacaattaaaatttcacatcaaa 44300060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 29648660 - 29648796
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    |||| ||||| |||||||| ||||||||       ||| |  |||| |||    
T  29648660 ttaattatatttaggtgttcaatcttaattaatttacactacaagactggcttagaacaattaaaatttcacatcaaagttctttcatttgaatgtcctt 29648759  T
Q  111 aaattcatcacttacattcataaaatttcttccattc 147  Q
    ||||| |||| || |||||||||||||||||| ||||    
T  29648760 aaatttatcaatttcattcataaaatttcttctattc 29648796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 25656757 - 25656626
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  25656757 ttaattatatttaggtgttcaatcctaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttttttcatctgaatgtcctt 25656658  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  25656657 aaatttatcagttacattcataaaatttcttc 25656626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4640296 - 4640209
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| |   ||| |||||| |||||||| ||||||||    
T  4640296 cttttaatttttatttaattatatttaggtatgcaatcttaattaatttacactatagagcttgtaacaattaaaatttcacatcaaa 4640209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 7556314 - 7556419
Alignment:
Q  20 tatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatc 119  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||||||||  |||| |||||||||||       |||||  |||| ||||||||||||    
T  7556314 tatattaaggtgttcaatctaaattaatttacaccacaagacttataacaa--aaaaatttacatcaaatttctttcatctgaatgtccttaaattcatc 7556411  T
Q  120 acttacat 127  Q
    | ||||||    
T  7556412 agttacat 7556419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43847632 - 43847545
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||  | | ||| |||||| |||||||| ||||||||    
T  43847632 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactgtagggcttgtaacaattaaaatttcacatcaaa 43847545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 10773643 - 10773511
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  10773643 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 10773544  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  10773543 aaatttatcagttatattcataaaatttattcc 10773511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 36308754 - 36308622
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  36308754 ttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 36308655  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  36308654 aaatttatcagttatattcataaaatttattcc 36308622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 33705512 - 33705385
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| || |||||||||||||||||||| ||||||| ||    |||| ||||| |||||||||||||||||       |||||  |||| |||    
T  33705512 ttaattatatttagatgttcaatcttaattaatttacactacaggattggcttagaacaattaaaattttacatcaaatttctttcatctgaatgtcctt 33705413  T
Q  111 aaattcatcacttacattcataaaattt 138  Q
    ||||| |||| ||| |||||||||||||    
T  33705412 aaatttatcagttatattcataaaattt 33705385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 46119155 - 46119024
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       ||| || || |  ||    
T  46119155 ttaattatatttaggtgttcaatcttaattaatttacactacacgattgacttagaacaattaaaatttcacatcaaatttctttcatttcaatatcttt 46119056  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  46119055 aaatttatcaattacattcataaaatttcttc 46119024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4638289 - 4638376
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | |  ||  ||||| |||||||| ||||||||    
T  4638289 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggtttgcaacaattaaaatttcacatcaaa 4638376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 7153832 - 7153700
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| | ||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  7153832 ttaattatatttatgtgttcaatcttaattaatttacactacaggactagcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 7153733  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  7153732 aaatttatcagttatattcataaaatttattcc 7153700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 7556938 - 7556861
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||    
T  7556938 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaa 7556861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 9135298 - 9135221
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||    
T  9135298 ttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaa 9135221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 12769081 - 12769004
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaa----gacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    | |||| ||||| |||||||| ||||||||    
T  12769081 ttaattatatttaggtgttcaatcttaattaatttacactacaatactggcttagaacaattaaaatttcacatcaaa 12769004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42159508 - 42159595
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| || || | |  || |||||| |||||||| ||||||||    
T  42159508 cttttaatttttatttaattatatttatgtatacaatcttaattaatttacattatagggtttgtaacaattaaaatttcacatcaaa 42159595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44110134 - 44110048
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| ||||  | ||| ||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  44110134 cttttaatttttatttaattatatttaggt-ataaatattaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 44110048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 44511526 - 44511573
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  44511526 ttaattatatttaggtgttcaatcttaattaatttacactacaggact 44511573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 48128642 - 48128600
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  48128642 ttaattatatttaggtgttcaatcttaattaatttacactaca 48128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 52405502 - 52405460
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  52405502 ttaattatatttaggtgttcaatcttaattaatttacactaca 52405460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 52406935 - 52406893
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  52406935 ttaattatatttaggtgttcaatcttaattaatttacactaca 52406893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 36731582 - 36731452
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||||||||||||||||||||  |||||| ||    |||| ||| ||| |||||| ||||||||       |||||  |||| |||    
T  36731582 ttaattatatttaggtgttcaatcttaattaatttagactacaggactggcttagaac-aattaaatttcacatcaaatttctttcatctgaatgtcctt 36731484  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  36731483 aaatttatcagttatattcataaaatttcttc 36731452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 51087637 - 51087506
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| |||||| ||||||||||||| || |||||||     |||||| ||||| |||||||| ||||||||        ||||  |||| |||    
T  51087637 ttaattatatttaggtgtccaatcttaattaagttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttaatctgaatgtcctt 51087538  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  51087537 aaatttatcagttatattcataaaatttcttc 51087506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 46464044 - 46463910
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca--------agacttataacaaataaaattttacatcaaannnnnnncatctcgatgt 106  Q
    ||||||||||| |||||||||||||||||||||||  ||||||         |||||| ||||| |||||||| ||||||||       |||||  ||||    
T  46464044 ttaattatatttaggtgttcaatcttaattaatttagactacatgactgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgt 46463945  T
Q  107 tcttaaattcatcacttacattcataaaatttctt 141  Q
     ||||| || |||| ||||||||||||||||||||    
T  46463944 ccttaattttatcatttacattcataaaatttctt 46463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 52405848 - 52405906
Alignment:
Q  116 catcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||| |||||||||||| | || ||| | ||||||||||||||||    
T  52405848 catcacttacattcataaa-tttcttccattccagaaccccaaacgtgagaacaaaaaca 52405906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 52406180 - 52406238
Alignment:
Q  116 catcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||||||| |||||||||||| | || ||| | ||||||||||||||||    
T  52406180 catcacttacattcataaa-tttcttccattccagaaccccaaacgtgagaacaaaaaca 52406238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11757074 - 11756990
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatca 86  Q
    ||||||||||||||||||||||||| ||||  | |||| |||||||||| ||||| | |  || |||||| |||||||| ||||||    
T  11757074 cttttaatttttatttaattatatttaggt-ataaatcataattaatttacactatagggtttgtaacaattaaaatttcacatca 11756990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 24083154 - 24083328
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||    
T  24083154 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatct 24083253  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
      |||| |||||||||||||||||||||||||||||||||| ||||  | ||||| || | ||||||||||||||    
T  24083254 gaatgtccttaaattcatcacttacattcataaaatttctttcatttgagaatcctgaacatgagaacaaaaaca 24083328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 21861313 - 21861136
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa---tcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnnca 97  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||| ||| |||||||||||||||||||||||| |||||||||       ||    
T  21861313 cttttaatttttatttaattatattaaggtgttcaaatatcttaattaatttacacaacaagacttataacaaataaaattatacatcaaatttctttca 21861214  T
Q  98 tctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||||| | ||||||||||||||    
T  21861213 tctggatgtccttaaattcatcacttacattcataaaatttattccattccaaaaccccgaacttgagaacaaaaaca 21861136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 11837614 - 11837458
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| |||||  ||||||||||    
T  11837614 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctagatgtcattaaattcat 11837515  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  11837514 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 11837458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 14104040 - 14104196
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||    
T  14104040 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgttcttaaattcat 14104139  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||| ||||||||||||||| ||||| | || ||||| ||||||||||||||||    
T  14104140 catttactttcataaaatttctttcattccagaaccccgaacgtgagaacaaaaaca 14104196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 17550854 - 17550698
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  17550854 ttatattaaggtgttcaatcttaattaatttacactacaagacttatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 17550755  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| ||||||||||||||||    
T  17550754 catttacattcataaaatttcttccattccagaaccccgaacgtgagaacaaaaaca 17550698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 955612 - 955456
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  955612 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 955513  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||| |||||||||||||||| ||||| | || ||||| ||||||||||||||||    
T  955512 catttatattcataaaatttcttacattccagaaccccgaacgtgagaacaaaaaca 955456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 4589848 - 4589692
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       | ||| ||||| |||||||||||    
T  4589848 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcttctggatgtccttaaattcat 4589749  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || | ||| ||||||||||||||||    
T  4589748 catttacattcataaaatttcttccattccagaacctcgaacgtgagaacaaaaaca 4589692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 28578657 - 28578813
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  28578657 ttatattaaggtgttcaatcttaattaatttacaatacaagacttataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcat 28578756  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||||||||||||||| ||||||||||||  | || ||||||| ||||||||||||||    
T  28578757 cacttacattcataacatttcttccatttcagaaccccgagcttgagaacaaaaaca 28578813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 27782503 - 27782645
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcg 102  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||       ||||| |    
T  27782503 tttaattttttttta--tatattaaggtgttcaatcttaattaatttacactacaaaacttataacaaataaaattttacatcaaatttctttcatctgg 27782600  T
Q  103 atgttcttaaattcatcacttacattcataaaatttcttccattc 147  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  27782601 atgttcttaaattcatcatttacattcataaaatttcttccattc 27782645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 11154646 - 11154490
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  11154646 ttatgttaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 11154547  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || ||||||||||||||||||||| |||| | ||  |||| ||||||||||||||||    
T  11154546 catttacattcataaaatttcttcgattccagaacaccgaacgtgagaacaaaaaca 11154490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 16918445 - 16918601
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||    
T  16918445 ttatattaaggtgttcaattttaattaatttacactacaagacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcat 16918544  T
Q  119 cacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    || |||||||||||||||||||||||||| | || ||||| | | ||||||||||||    
T  16918545 catttacattcataaaatttcttccattccagaaccccgaacataagaacaaaaaca 16918601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 27438447 - 27438575
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||       | | | ||||| |||||||||||    
T  27438447 ttatattaaggtgttcaatcttaattaacttacactacaagacttataacaaataaaattttacatcaaatttctttcgtttggatgtccttaaattcat 27438546  T
Q  119 cacttacattcataaaatttcttccattc 147  Q
    || ||||||||||||||||||||||||||    
T  27438547 catttacattcataaaatttcttccattc 27438575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 175
Target Start/End: Original strand, 25109578 - 25109745
Alignment:
Q  7 atttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgt 106  Q
    |||||||| ||  ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||       ||||| |||||    
T  25109578 atttttatatatatatattaaggtgttcaatcttaattaatttaaaccacaagacttataacaaataaaattttacatcaaatttctttcatctggatgt 25109677  T
Q  107 tcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||||||||||||  | ||||||||||||||||||||||| | || ||  | ||||||||||||||||    
T  25109678 ccttaaattcatca-atgcattcataaaatttcttccattccagaaccctaaacgtgagaacaaaaaca 25109745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 23580329 - 23580482
Alignment:
Q  21 atattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcatca 120  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||||       ||||| ||||| |||||||||||||    
T  23580329 atattaaggtgttcactcttaattaatttacactacaaggcttata-caaataaaattttacatcaaatttctttcatctggatgtccttaaattcatca 23580427  T
Q  121 cttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     |||||| |||| |||||||| ||||| | || || || ||||||||||||||||    
T  23580428 tttacatccatacaatttctttcattccagaaccctgaacgtgagaacaaaaaca 23580482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5090287 - 5090200
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  5090287 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 5090200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32562614 - 32562527
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||| | ||||| | | |||||||||| |||||||| ||||||||    
T  32562614 cttttaatttttatttaattatatttaggtatacaatcttaattaatctacactatatggcttataacaattaaaatttgacatcaaa 32562527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 28579499 - 28579368
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  28579499 ttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 28579400  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  28579399 aaatttatcagttatattcataaaatttcttc 28579368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13866160 - 13866247
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||| |||||||||| |||| | |||||||||||||||| ||||| |   ||| |||||| |||||||||||||||||    
T  13866160 cttttaatttttatctaattatatttaggtatacaatcttaattaatttacactatagcgcttgtaacaattaaaattttacatcaaa 13866247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34574798 - 34574711
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| ||| || |||||||| ||||||||    
T  34574798 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaaaaattaaaatttcacatcaaa 34574711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 14104887 - 14104763
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    |||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  14104887 ttaattatatttaggtgttcaatcttaattaatttacactacaagactggcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 14104788  T
Q  111 aaattcatcacttacattcataaaa 135  Q
    ||||| |||| ||| ||||||||||    
T  14104787 aaatttatcagttatattcataaaa 14104763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 16919068 - 16918936
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| | ||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  ||||||||    
T  16919068 ttaattatatttatgtgttcaatcttaattaatttacactacaggactagcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 16918969  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  16918968 aaatttatcagttatattcataaaatttattcc 16918936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 954746 - 954877
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||        ||||  |||| |||    
T  954746 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttattttatctgaatgtcctt 954845  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| ||| |||||||||||||||||    
T  954846 aaatttatcagttatattcataaaatttcttc 954877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 15288224 - 15288355
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||| | ||||||| ||    |||| ||||| |||||||| |||| |||       ||| |  ||||||||    
T  15288224 ttaattatatttaggtgttcaatcttaattaatatacactacatgactggcttagaacaattaaaatttcacataaaatttctttcatttgaatgttctt 15288323  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  15288324 aaatttatcagttacattcataaaatttcttc 15288355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 1090499 - 1090546
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1090499 ttaattatatttaggtgttcaatcttaattaatttacactacaagact 1090546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 11153794 - 11153923
Alignment:
Q  17 aattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaa 112  Q
    ||||||||| ||||||||||| ||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  |||| |||||    
T  11153794 aattatatttaggtgttcaattttaattaatttacactacatgactgtcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaa 11153893  T
Q  113 attcatcacttacattcataaaatttcttc 142  Q
    ||| |||| ||| |||||||||||||||||    
T  11153894 atttatcagttatattcataaaatttcttc 11153923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 15508249 - 15508328
Alignment:
Q  5 taatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacat 84  Q
    ||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||    
T  15508249 taatttttatttaattatatttaggtatacaatcttaattaatttacactatatggcttgtaacaattaaaatttcacat 15508328  T

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Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24159134 - 24159221
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||||| |  | | |||||||||||||||| || || | | ||| |||||| |||||||||||||||||    
T  24159134 cttttaatttttatttaattatatttatatatacaatcttaattaatttacattatagggcttgtaacaattaaaattttacatcaaa 24159221  T

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Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 4589009 - 4589141
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    |||| |||||  ||||||| ||||||||        ||||  ||||||||    
T  4589009 ttaattatatttaggtgttcaatcttaattaatttacactacaagattggcttagaacaataaaaatttcacatcaaatttctttaatctgaatgttctt 4589108  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||| ||||||||| ||||    
T  4589109 aaatttatcaattatatttataaaatttattcc 4589141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 11836760 - 11836884
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| || |||| ||    |||| ||||| |||||||| ||||||||       |||||  ||||||||    
T  11836760 ttaattatatttaggtgttcaatcttaattaatttacattacaggactagcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 11836859  T
Q  111 aaattcatcacttacattcataaaa 135  Q
    ||||| |||| ||| ||||||||||    
T  11836860 aaatttatcagttatattcataaaa 11836884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 23573970 - 23573838
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||       |||||  | || |||    
T  23573970 ttaattatatttaggtgttcaatcttaattaatttacactacatgactagcttagaacaattaaaatttcacatcaaatttctttcatctgaaagtactt 23573871  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  23573870 aaatttatcagttatattcataaaatttattcc 23573838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 24084011 - 24083887
Alignment:
Q  22 tattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattca 117  Q
    |||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       ||| |  |||| |||||||| |    
T  24084011 tatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttgtttcatttgaatgtccttaaattta 24083912  T
Q  118 tcacttacattcataaaatttcttc 142  Q
    ||| |||||||||||||||||||||    
T  24083911 tcaattacattcataaaatttcttc 24083887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 27783372 - 27783240
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       || ||  |||| |||    
T  27783372 ttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcaactgaatgtcctt 27783273  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  27783272 aaatttatcagttatattcataaaatttattcc 27783240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5088728 - 5088781
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcact 54  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||    
T  5088728 cttttaatttttatttaattatatttaggtatacaatcttaattaatttacact 5088781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 13869162 - 13869082
Alignment:
Q  8 tttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||| |||| | |||||||| ||||||| ||||| | | ||||||||||  ||||||| ||||||||    
T  13869162 tttttatttaattatatttaggtatacaatcttacttaatttacactatagggcttataacaataaaaatttcacatcaaa 13869082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 25119602 - 25119525
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||| ||||| |||||||| ||||||||    
T  25119602 ttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaa 25119525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 21860503 - 21860545
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  21860503 ttaattatatttaggtgttcaatcttaattaatttacactaca 21860545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 27440809 - 27440762
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||| | ||||||| ||||    
T  27440809 ttaattatatttaggtgttcaatcttaattaatctacactacatgact 27440762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 56349 - 56526
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaa---tcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnnca 97  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||||||| |       ||    
T  56349 cttttaatttttatttaattatattaaggtgttcaaatatcttaattaatttacactacaagacttataacaaataaaattttacatcatatttctttca 56448  T
Q  98 tctcgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
    ||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||||| | ||||||||||||||    
T  56449 tctggatgtccttaaattcatcacttacattcataaaatttattccattccaaaaccccgaacttgagaacaaaaaca 56526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 57164 - 57087
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaa----gacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    | |||| ||||| |||||||| ||||||||    
T  57164 ttaattatatttaggtgttcaatcttaattaatttacactacaatactggcttagaacaattaaaatttcacatcaaa 57087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 6061 - 5887
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatct 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||       |||||    
T  6061 cttttaatttttatttaattatattaaggtgtttaatcttaattaatttacactgcaagacttataacaaataaaattttacatcaaatttctttcatct 5962  T
Q  101 cgatgttcttaaattcatcacttacattcataaaatttcttccattctaaaatcccgagcgtgagaacaaaaaca 175  Q
     ||| | | ||||||||||| ||||||||||||| |||||||||||||| || ||||| | ||||||||||||||    
T  5961 ggatttccctaaattcatcatttacattcataaactttcttccattctagaaccccgaacatgagaacaaaaaca 5887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 5088 - 5219
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||     |||||||||||| || ||||| ||||||||       ||| |  |||| |||    
T  5088 ttaataatatttaggtgttcaatcttaattaatttacactacagaactgacttataacaattataatttcacatcaaaactgtttcatttgaatgtcctt 5187  T
Q  111 aaattcatcacttacattcataaaatttcttc 142  Q
    ||||| |||| |||||||||||||||||||||    
T  5188 aaatttatcaattacattcataaaatttcttc 5219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 48915 - 48787
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||       | | | ||||| |||||||||||    
T  48915 ttatattaaggtgttcaatcttaattaacttacactacaagacttataacaaataaaattttacatcaaatttctttcgtttggatgtccttaaattcat 48816  T
Q  119 cacttacattcataaaatttcttccattc 147  Q
    || ||||||||||||||||||||||||||    
T  48815 catttacattcataaaatttcttccattc 48787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 46552 - 46599
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaagact 62  Q
    ||||||||||| ||||||||||||||||||||| | ||||||| ||||    
T  46552 ttaattatatttaggtgttcaatcttaattaatctacactacatgact 46599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 20954 - 21081
Alignment:
Q  19 ttatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaannnnnnncatctcgatgttcttaaattcat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       || |  ||||| |||||||||||    
T  20954 ttatattaaggtgttcaatcttaattaatttacactacaagacttataacaaataaaattttacatcaaatttatttcaac-ggatgtccttaaattcat 21052  T
Q  119 cacttacattcataaaatttcttccattc 147  Q
    || ||||||||||||||||| ||||||||    
T  21053 catttacattcataaaattttttccattc 21081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 22896 - 22764
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactacaaga----cttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||    |||||||||| |||||||| ||||||||       |||||  |||| |||    
T  22896 ttaattatatttaggtgttcaatcttaattaattttcactacatgactggcttataacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 22797  T
Q  111 aaattcatcacttacattcataaaatttcttcc 143  Q
    ||||| |||| ||| ||||||||||||| ||||    
T  22796 aaatttatcagttatattcataaaatttattcc 22764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 989 - 904
Alignment:
Q  3 tttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  989 tttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 71754 - 71668
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||| ||||| |   ||| |||||| |||||||| ||||||||    
T  71754 ttttaatttttatttaattatatttaggtatacaatcttaattaatttacactatagagcttgtaacaattaaaatttcacatcaaa 71668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 69594 - 69677
Alignment:
Q  1 cttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacat 84  Q
    ||||||||||||||||||||||||| |||| |  ||||||||||||||| || || ||| ||| |||||| |||||||| ||||    
T  69594 cttttaatttttatttaattatatttaggtataaaatcttaattaatttacattataaggcttgtaacaattaaaatttcacat 69677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 18417 - 18541
Alignment:
Q  15 ttaattatattaaggtgttcaatcttaattaatttgcactaca----agacttataacaaataaaattttacatcaaannnnnnncatctcgatgttctt 110  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||     |||||| ||||| |||||||| ||||||||       |||||  |||| |||    
T  18417 ttaattatatttaggtgtttaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctttcatctgaatgtcctt 18516  T
Q  111 aaattcatcacttacattcataaaa 135  Q
    ||||| |||| ||||||||||||||    
T  18517 aaatttatcagttacattcataaaa 18541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 94606 - 94520
Alignment:
Q  2 ttttaatttttatttaattatattaaggtgttcaatcttaattaatttgcactacaagacttataacaaataaaattttacatcaaa 88  Q
    |||||||||||||||||||||||| | || | |||| ||||||||||| ||||| | | ||| |||||| |||||||| ||||||||    
T  94606 ttttaatttttatttaattatatttatgtatacaattttaattaatttacactatagggcttgtaacaattaaaatttcacatcaaa 94520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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