View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_low_127 (Length: 249)
Name: NF1459_low_127
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_low_127 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 39107558 - 39107759
Alignment:
| Q |
8 |
tgagatgaattaaggaagtatcattgatatggtaaaattcttatcttggcatgaatgaaattcaaaacgaatgaatttcatattttacctttaccattag |
107 |
Q |
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| T |
39107558 |
tgagaagaatgaaggaagtatcattgatatggtaaaattcttatcttggcatgaatgaaattcaaaaagaatgaatttcatattttacctttaccattag |
39107657 |
T |
|
| Q |
108 |
aattctcagtcccttgtttgtttggattatgacgttacttaggatttctttgtatcttggttcgtgtaatttggagacataacatgtttacttgactggg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39107658 |
aattctcagtcccttgtttgtttggattatgacgttacttaggatttctttgtatcttggttcgtgtaatttggagacataacatgtttacttgactggg |
39107757 |
T |
|
| Q |
208 |
ac |
209 |
Q |
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|| |
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| T |
39107758 |
ac |
39107759 |
T |
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