View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_low_144 (Length: 240)
Name: NF1459_low_144
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_low_144 |
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Alignment Details
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 25088948 - 25088737
Alignment:
| Q |
11 |
cagagagaatacatatgaacttatcagttcttattagaaagaaacatcgataatatagagtacccatagaatgtgattaaaatctagccacatattttct |
110 |
Q |
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| T |
25088948 |
cagagagattacatatgaactcatcagttcttattagaaagaaacatcgataatatagagtacccatagaatgtgagtaaaatctagccacatattttct |
25088849 |
T |
|
| Q |
111 |
aatttttaagttacatttattaattttcttgacaaccattcttacattaccaattattgtatacttactttattgaaaaaagttaagaaattttattctt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| |
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| T |
25088848 |
aatttttaagttacatttattaattttcttgacaaccattcttacattaccaattattgtatacttactttaatgaaaagagttaagaaattatattctt |
25088749 |
T |
|
| Q |
211 |
tcaggtcactgt |
222 |
Q |
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|||||||||||| |
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| T |
25088748 |
tcaggtcactgt |
25088737 |
T |
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