View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_low_167 (Length: 219)
Name: NF1459_low_167
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_low_167 |
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Alignment Details
Target: chr1 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 45743387 - 45743570
Alignment:
| Q |
21 |
tttccgtaatgtaccatttgacatgccatagccagagggatcattgccatcaggaacaatggcaaagcctgaaggcaggagtgcaacatatgcagaatct |
120 |
Q |
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| T |
45743387 |
tttctgtaatgtaccatttgacatgccatagccagagggatcattgccatcaggaacaatggcaaagcctgaaggcaggagtgcaacatatgcagaatct |
45743486 |
T |
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| Q |
121 |
ccaccactcatcaccacattcaatgattgcccgtcaactggtgcatacaccaccactgagcaagatgtatccatccaagtttct |
204 |
Q |
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| T |
45743487 |
ccaccactcatcaccacattcaatgattgcccgtcaactggtgcatacaccaccactgagcaagatgtatccatccaagtttct |
45743570 |
T |
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