View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1459_low_174 (Length: 211)

Name: NF1459_low_174
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1459_low_174
NF1459_low_174
[»] chr7 (50 HSPs)
chr7 (70-198)||(13704675-13704803)
chr7 (72-198)||(13642295-13642410)
chr7 (2-72)||(32680592-32680662)
chr7 (2-71)||(32680925-32680994)
chr7 (2-73)||(43266262-43266333)
chr7 (2-71)||(34928980-34929049)
chr7 (2-71)||(39686864-39686933)
chr7 (2-70)||(30948490-30948558)
chr7 (10-70)||(32934715-32934775)
chr7 (2-70)||(34928649-34928717)
chr7 (10-73)||(43266633-43266696)
chr7 (10-66)||(46204424-46204480)
chr7 (2-69)||(10600026-10600093)
chr7 (10-69)||(25453128-25453187)
chr7 (10-69)||(42617911-42617970)
chr7 (2-80)||(23058788-23058866)
chr7 (10-71)||(42618278-42618339)
chr7 (9-69)||(23058429-23058489)
chr7 (2-62)||(30948167-30948227)
chr7 (2-70)||(39686533-39686601)
chr7 (10-69)||(32068463-32068522)
chr7 (10-73)||(33828341-33828404)
chr7 (10-66)||(10600316-10600372)
chr7 (17-69)||(22081560-22081612)
chr7 (10-70)||(27138308-27138368)
chr7 (10-66)||(28890582-28890638)
chr7 (10-66)||(32068099-32068155)
chr7 (2-60)||(13050142-13050200)
chr7 (10-60)||(18087707-18087757)
chr7 (1-51)||(18856014-18856064)
chr7 (2-60)||(23608817-23608875)
chr7 (11-60)||(18086298-18086347)
chr7 (10-71)||(39274868-39274929)
chr7 (2-50)||(6571032-6571080)
chr7 (10-50)||(22871646-22871686)
chr7 (22-66)||(25628481-25628525)
chr7 (2-50)||(28469369-28469417)
chr7 (10-66)||(32934351-32934407)
chr7 (22-69)||(22081938-22081985)
chr7 (2-60)||(32687406-32687464)
chr7 (10-51)||(13044690-13044731)
chr7 (1-50)||(22828178-22828227)
chr7 (14-71)||(25453499-25453556)
chr7 (22-67)||(25628857-25628902)
chr7 (10-50)||(6253490-6253530)
chr7 (10-50)||(10935813-10935853)
chr7 (10-50)||(16804014-16804054)
chr7 (10-50)||(17102039-17102079)
chr7 (10-50)||(27396964-27397004)
chr7 (10-50)||(32299074-32299114)
[»] chr8 (47 HSPs)
chr8 (2-73)||(11674691-11674762)
chr8 (2-71)||(11675024-11675093)
chr8 (2-73)||(23507786-23507857)
chr8 (1-71)||(23505050-23505120)
chr8 (2-66)||(36325564-36325628)
chr8 (2-70)||(36325233-36325301)
chr8 (2-71)||(234099-234168)
chr8 (2-71)||(710510-710579)
chr8 (2-71)||(747722-747791)
chr8 (2-71)||(871617-871686)
chr8 (2-73)||(38845629-38845700)
chr8 (2-70)||(2266822-2266890)
chr8 (2-70)||(40775649-40775717)
chr8 (10-69)||(15229931-15229990)
chr8 (2-69)||(44664508-44664575)
chr8 (2-72)||(44406854-44406924)
chr8 (10-71)||(7983426-7983487)
chr8 (1-70)||(15230289-15230358)
chr8 (10-71)||(35634466-35634527)
chr8 (2-70)||(2266491-2266559)
chr8 (2-73)||(3041786-3041857)
chr8 (2-69)||(40775980-40776047)
chr8 (2-69)||(44407187-44407254)
chr8 (10-71)||(10445702-10445763)
chr8 (10-67)||(44664875-44664932)
chr8 (14-66)||(8997859-8997911)
chr8 (2-62)||(38845306-38845366)
chr8 (10-70)||(41353940-41354000)
chr8 (23-73)||(6471686-6471736)
chr8 (23-69)||(6472395-6472441)
chr8 (2-72)||(35449939-35450009)
chr8 (22-67)||(8998068-8998113)
chr8 (2-62)||(3041463-3041523)
chr8 (10-66)||(37542227-37542283)
chr8 (10-66)||(42945481-42945537)
chr8 (10-69)||(25124930-25124989)
chr8 (2-51)||(2535911-2535960)
chr8 (10-67)||(21432695-21432752)
chr8 (2-50)||(12273214-12273262)
chr8 (10-66)||(25124566-25124622)
chr8 (10-66)||(38003773-38003829)
chr8 (2-60)||(10749869-10749927)
chr8 (2-51)||(27500437-27500486)
chr8 (2-50)||(16388887-16388935)
chr8 (2-50)||(23663564-23663612)
chr8 (10-50)||(39071695-39071735)
chr8 (22-66)||(41353577-41353621)
[»] chr3 (50 HSPs)
chr3 (2-73)||(36314294-36314365)
chr3 (2-72)||(48322707-48322777)
chr3 (2-73)||(10770486-10770557)
chr3 (2-69)||(36314628-36314695)
chr3 (2-71)||(10770821-10770890)
chr3 (2-71)||(48322375-48322444)
chr3 (2-70)||(37778632-37778700)
chr3 (2-73)||(8041612-8041683)
chr3 (2-69)||(10294567-10294634)
chr3 (2-73)||(54466419-54466490)
chr3 (10-70)||(40788787-40788847)
chr3 (1-69)||(47921466-47921534)
chr3 (1-73)||(13948776-13948848)
chr3 (1-73)||(41421968-41422040)
chr3 (10-70)||(52032506-52032566)
chr3 (2-62)||(54466753-54466813)
chr3 (10-73)||(3469567-3469630)
chr3 (1-71)||(33156354-33156424)
chr3 (2-71)||(8041946-8042015)
chr3 (10-67)||(29118529-29118586)
chr3 (10-67)||(29685943-29686000)
chr3 (1-70)||(32306423-32306492)
chr3 (12-69)||(42855676-42855733)
chr3 (10-75)||(47551487-47551552)
chr3 (10-70)||(3469199-3469259)
chr3 (10-70)||(29118905-29118965)
chr3 (10-70)||(33506317-33506377)
chr3 (10-73)||(11910695-11910758)
chr3 (22-69)||(13949074-13949121)
chr3 (22-72)||(52032135-52032185)
chr3 (22-67)||(33506180-33506225)
chr3 (10-51)||(35643869-35643910)
chr3 (22-66)||(32306803-32306847)
chr3 (2-69)||(33154877-33154944)
chr3 (1-51)||(1078555-1078605)
chr3 (2-60)||(43607789-43607847)
chr3 (22-67)||(29686319-29686364)
chr3 (2-46)||(1079582-1079626)
chr3 (10-50)||(2796198-2796238)
chr3 (22-66)||(3596112-3596156)
chr3 (17-73)||(4322588-4322644)
chr3 (10-46)||(4323571-4323607)
chr3 (10-70)||(10294926-10294986)
chr3 (3-50)||(34142580-34142627)
chr3 (12-54)||(14634123-14634165)
chr3 (10-51)||(9368670-9368711)
chr3 (1-50)||(19741252-19741301)
chr3 (10-71)||(40788418-40788479)
chr3 (10-46)||(23276352-23276388)
chr3 (2-46)||(25108456-25108500)
[»] chr1 (42 HSPs)
chr1 (2-71)||(24905165-24905234)
chr1 (2-70)||(28011698-28011766)
chr1 (2-73)||(40714440-40714511)
chr1 (2-69)||(52134398-52134465)
chr1 (10-69)||(17188954-17189013)
chr1 (2-73)||(49955706-49955777)
chr1 (13-71)||(37929416-37929474)
chr1 (2-72)||(52134065-52134135)
chr1 (2-67)||(33442924-33442989)
chr1 (10-71)||(40714810-40714871)
chr1 (10-70)||(8898516-8898576)
chr1 (10-70)||(25885360-25885420)
chr1 (10-74)||(31050945-31051009)
chr1 (10-69)||(17189218-17189277)
chr1 (10-69)||(30326496-30326555)
chr1 (3-62)||(31514325-31514384)
chr1 (2-69)||(33442594-33442661)
chr1 (10-69)||(49955347-49955406)
chr1 (22-71)||(45750221-45750270)
chr1 (10-70)||(8898884-8898944)
chr1 (10-70)||(20760872-20760932)
chr1 (2-62)||(31514647-31514707)
chr1 (2-70)||(45749841-45749909)
chr1 (22-72)||(28325182-28325232)
chr1 (2-62)||(4716475-4716535)
chr1 (10-70)||(7371536-7371596)
chr1 (2-66)||(24905497-24905560)
chr1 (22-72)||(32558486-32558536)
chr1 (10-71)||(12906026-12906087)
chr1 (1-70)||(31058415-31058484)
chr1 (22-67)||(44523517-44523562)
chr1 (2-50)||(25647903-25647951)
chr1 (25-73)||(25884697-25884745)
chr1 (10-66)||(35040981-35041037)
chr1 (10-73)||(35473627-35473690)
chr1 (22-71)||(7371288-7371337)
chr1 (25-70)||(28324804-28324849)
chr1 (2-71)||(35038453-35038522)
chr1 (2-71)||(44522145-44522214)
chr1 (10-50)||(6367581-6367621)
chr1 (10-50)||(26024761-26024801)
chr1 (2-42)||(28011390-28011430)
[»] scaffold0205 (2 HSPs)
scaffold0205 (2-70)||(21008-21076)
scaffold0205 (2-69)||(21299-21366)
[»] chr4 (55 HSPs)
chr4 (2-70)||(22567116-22567184)
chr4 (2-69)||(9400519-9400586)
chr4 (2-61)||(27934848-27934907)
chr4 (2-72)||(42738028-42738098)
chr4 (2-67)||(9400849-9400914)
chr4 (1-69)||(4982726-4982794)
chr4 (2-70)||(27069269-27069337)
chr4 (2-70)||(27934531-27934599)
chr4 (2-69)||(4983056-4983123)
chr4 (2-71)||(51203607-51203676)
chr4 (2-70)||(34837073-34837141)
chr4 (2-70)||(42738361-42738429)
chr4 (10-70)||(54858559-54858619)
chr4 (2-70)||(54858919-54858987)
chr4 (2-73)||(32950472-32950543)
chr4 (2-73)||(34837404-34837475)
chr4 (2-69)||(38012500-38012567)
chr4 (10-71)||(16605600-16605661)
chr4 (2-71)||(50504184-50504253)
chr4 (10-70)||(3032581-3032641)
chr4 (2-62)||(9144773-9144833)
chr4 (2-70)||(9145096-9145164)
chr4 (2-66)||(11523952-11524016)
chr4 (2-70)||(27149355-27149422)
chr4 (2-70)||(32950141-32950209)
chr4 (2-66)||(33247603-33247667)
chr4 (2-66)||(45463432-45463496)
chr4 (10-70)||(52573595-52573655)
chr4 (10-69)||(10408256-10408315)
chr4 (10-73)||(27068906-27068969)
chr4 (2-69)||(38012170-38012237)
chr4 (10-73)||(52573224-52573287)
chr4 (2-56)||(33247287-33247341)
chr4 (1-71)||(39701267-39701337)
chr4 (10-67)||(45463075-45463132)
chr4 (2-66)||(5818134-5818198)
chr4 (10-69)||(10407889-10407948)
chr4 (2-71)||(22566797-22566866)
chr4 (10-71)||(27891582-27891643)
chr4 (1-70)||(50503824-50503893)
chr4 (10-70)||(22987218-22987278)
chr4 (2-66)||(39667135-39667199)
chr4 (22-72)||(51859785-51859835)
chr4 (2-50)||(7451853-7451901)
chr4 (10-66)||(22717942-22717998)
chr4 (2-50)||(49879226-49879274)
chr4 (2-50)||(50418687-50418735)
chr4 (10-46)||(50750910-50750946)
chr4 (17-73)||(50751873-50751929)
chr4 (48-79)||(33247054-33247085)
chr4 (2-43)||(22718298-22718339)
chr4 (2-43)||(22986877-22986918)
chr4 (2-54)||(6237181-6237233)
chr4 (10-50)||(24711130-24711170)
chr4 (10-50)||(37248574-37248614)
[»] chr6 (30 HSPs)
chr6 (3-70)||(14196614-14196681)
chr6 (2-73)||(25485949-25486020)
chr6 (2-68)||(14196945-14197011)
chr6 (2-70)||(362869-362937)
chr6 (2-69)||(363160-363227)
chr6 (2-69)||(31406878-31406945)
chr6 (2-68)||(7905244-7905310)
chr6 (10-71)||(32593488-32593549)
chr6 (5-73)||(10781143-10781211)
chr6 (2-70)||(25486256-25486324)
chr6 (2-74)||(28000380-28000452)
chr6 (10-66)||(31407245-31407301)
chr6 (10-73)||(22502770-22502833)
chr6 (10-71)||(7160802-7160863)
chr6 (1-73)||(15913906-15913978)
chr6 (2-70)||(22367424-22367492)
chr6 (2-70)||(22373018-22373086)
chr6 (10-70)||(22503141-22503201)
chr6 (22-69)||(6517503-6517550)
chr6 (10-73)||(7161171-7161234)
chr6 (22-73)||(21836409-21836460)
chr6 (3-70)||(28000716-28000783)
chr6 (10-66)||(7905610-7905666)
chr6 (3-71)||(15913546-15913614)
chr6 (22-66)||(21836035-21836079)
chr6 (10-50)||(30337787-30337827)
chr6 (2-43)||(24210557-24210598)
chr6 (2-83)||(26463165-26463246)
chr6 (2-46)||(26464560-26464604)
chr6 (10-50)||(30337468-30337508)
[»] chr5 (32 HSPs)
chr5 (3-70)||(6758196-6758263)
chr5 (2-66)||(41930846-41930910)
chr5 (2-72)||(297011-297081)
chr5 (2-72)||(1505964-1506034)
chr5 (2-71)||(17544407-17544476)
chr5 (2-58)||(6757876-6757932)
chr5 (2-70)||(41930515-41930583)
chr5 (2-69)||(8875449-8875516)
chr5 (2-69)||(31482402-31482469)
chr5 (2-63)||(8875626-8875687)
chr5 (2-62)||(1506297-1506357)
chr5 (2-70)||(31482732-31482800)
chr5 (10-71)||(20153282-20153343)
chr5 (2-62)||(297344-297404)
chr5 (10-70)||(33871705-33871765)
chr5 (10-69)||(33871339-33871398)
chr5 (10-69)||(20152781-20152840)
chr5 (2-60)||(24141461-24141519)
chr5 (2-60)||(40150175-40150233)
chr5 (2-50)||(3529203-3529251)
chr5 (22-70)||(3656797-3656845)
chr5 (2-50)||(13962883-13962931)
chr5 (12-50)||(39453670-39453708)
chr5 (10-47)||(22298564-22298601)
chr5 (2-50)||(3528892-3528940)
chr5 (10-50)||(5993908-5993948)
chr5 (10-50)||(11761768-11761808)
chr5 (2-50)||(16157216-16157264)
chr5 (2-50)||(20840552-20840600)
chr5 (10-50)||(27587167-27587207)
chr5 (2-50)||(38475360-38475408)
chr5 (2-46)||(42067885-42067929)
[»] chr2 (31 HSPs)
chr2 (2-71)||(14900494-14900563)
chr2 (2-70)||(14900811-14900879)
chr2 (2-72)||(13995670-13995740)
chr2 (2-71)||(13996003-13996072)
chr2 (2-70)||(1695739-1695807)
chr2 (2-70)||(33062049-33062117)
chr2 (2-70)||(33062380-33062448)
chr2 (2-70)||(33739702-33739770)
chr2 (10-69)||(28226111-28226170)
chr2 (2-68)||(11830365-11830431)
chr2 (2-72)||(33740033-33740103)
chr2 (2-71)||(41248889-41248958)
chr2 (10-70)||(8710835-8710895)
chr2 (10-70)||(15604338-15604398)
chr2 (2-71)||(41248557-41248626)
chr2 (2-62)||(1696070-1696130)
chr2 (1-71)||(6573045-6573115)
chr2 (10-68)||(41588425-41588483)
chr2 (10-71)||(6573541-6573602)
chr2 (2-71)||(8342185-8342254)
chr2 (10-78)||(8342546-8342615)
chr2 (10-66)||(15604706-15604762)
chr2 (2-70)||(41587234-41587301)
chr2 (2-73)||(28228666-28228737)
chr2 (2-50)||(44714122-44714170)
chr2 (2-60)||(199030-199088)
chr2 (2-60)||(202717-202775)
chr2 (10-48)||(16099076-16099114)
chr2 (10-50)||(11163392-11163432)
chr2 (10-50)||(15848107-15848147)
chr2 (2-50)||(39498329-39498377)
[»] scaffold0388 (1 HSPs)
scaffold0388 (2-73)||(12598-12669)
[»] scaffold0328 (1 HSPs)
scaffold0328 (2-71)||(11499-11568)
[»] scaffold0024 (2 HSPs)
scaffold0024 (2-71)||(141924-141993)
scaffold0024 (2-71)||(141592-141661)
[»] scaffold0771 (2 HSPs)
scaffold0771 (1-73)||(916-988)
scaffold0771 (22-69)||(1214-1261)
[»] scaffold0559 (1 HSPs)
scaffold0559 (2-69)||(1233-1300)
[»] scaffold0006 (2 HSPs)
scaffold0006 (22-73)||(222168-222219)
scaffold0006 (22-66)||(221794-221838)
[»] scaffold0599 (1 HSPs)
scaffold0599 (10-73)||(2389-2452)
[»] scaffold0031 (1 HSPs)
scaffold0031 (10-50)||(68984-69024)
[»] scaffold0042 (1 HSPs)
scaffold0042 (22-67)||(12159-12204)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-50)||(2101-2150)
[»] scaffold0020 (1 HSPs)
scaffold0020 (10-50)||(139691-139731)


Alignment Details
Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 13704803 - 13704675
Alignment:
Q  70 taaacatatttatacctaataaagtatatattcaatccatactaaaactatgaaaattatttgttggagagatagtataaaattttaaatgattgtatat 169  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  13704803 taaacatatttatacccaataaagtatatatttaatccatactaaaactatgaaaattatttgttggagagacagtataaaattttaaatgattttatat 13704704  T
Q  170 acctgtcctcatctgttgtccattggcct 198  Q
    |||| |||||||| |||||||||||||||    
T  13704703 acctatcctcatccgttgtccattggcct 13704675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 13642410 - 13642295
Alignment:
Q  72 aacatatttatacctaataaagtatatattcaatccatactaaaactatgaaaattatttgttggagagatagtataaaattttaaatgattgtatatac 171  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||           ||||||||||||||||||| |||||||    
T  13642410 aacatatttatacccaataaagtatatattcaatccatactaacactatcaaaattatttgt-----------tataaaattttaaatgattttatatac 13642322  T
Q  172 ctgtcctcatctgttgtccattggcct 198  Q
    ||||||||||| |||||||||||||||    
T  13642321 ctgtcctcatccgttgtccattggcct 13642295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 32680662 - 32680592
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32680662 gattagcaattacaggaacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 32680592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 32680925 - 32680994
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32680925 gattagcaattacatggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaagccta 32680994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 43266333 - 43266262
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  43266333 gattaacgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaa 43266262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 34928980 - 34929049
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  34928980 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 34929049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 39686864 - 39686933
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  39686864 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 39686933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 30948490 - 30948558
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  30948490 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 30948558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 32934715 - 32934775
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  32934715 attacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 32934775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 34928717 - 34928649
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  34928717 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 34928649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 43266633 - 43266696
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||| |||| |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  43266633 attacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaa 43266696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 46204480 - 46204424
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  46204480 attacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 46204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 10600093 - 10600026
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||| |||| |||||| |||||||||||||||||||||||||||||| || ||||||||| ||||    
T  10600093 gattaacgattatagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcatttagcc 10600026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 25453187 - 25453128
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||| |||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  25453187 attatagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 25453128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 42617970 - 42617911
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||| |||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  42617970 attaaagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 42617911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 23058788 - 23058866
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaacatattt 80  Q
    ||||||| |||||| |||  ||||||||||||||||| |||||||||||| || ||||||||||||||| || ||||||    
T  23058788 gattaacgattacaaggattaatttttaaatgacgccgaattgcaaggacgaaacacatcattaagccttaatatattt 23058866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 42618278 - 42618339
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||||| || |||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  42618278 attacaggaactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 42618339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 23058489 - 23058429
Alignment:
Q  9 aattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||||||||||| |||||||||||||| | ||||||||||||| || ||||||||||||||    
T  23058489 aattacagggactaatttttaaatgactcttaattgcaaggacgaaacacatcattaagcc 23058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 30948227 - 30948167
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||  ||| |||||||    
T  30948227 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatca 30948167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 39686601 - 39686533
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||  |||  |||||| |||||||    
T  39686601 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaatacatcaataagcct 39686533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 32068463 - 32068522
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||  |||||||||||||| ||||||||||||||| || ||||||||||||||    
T  32068463 attacagggattaatttttaaatgactcctaattgcaaggacgaaacacatcattaagcc 32068522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 33828341 - 33828404
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||| ||| |||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  33828341 attacagagactaatttttaaatgacacctaattgcaaggacgaaactcatcattaagcctaaa 33828404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 10600316 - 10600372
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||||| |||| |||||||||||||||||||||||||| ||| || |||||||||||    
T  10600316 attacaaggactaatttttaaatgacgcctaattgcaatgacgaaacacatcattaa 10600372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 22081612 - 22081560
Alignment:
Q  17 ggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||| |||||||||||||||| ||||||||||||| || ||||||||||||||    
T  22081612 ggactaatttttaaatgacgcataattgcaaggacgaaacacatcattaagcc 22081560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 27138308 - 27138368
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| |||| |||||||||||||||||| |||| |||||| || |||||||||||||||    
T  27138308 attacaaggactaatttttaaatgacgcctgattgaaaggacgaaacacatcattaagcct 27138368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 28890638 - 28890582
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||||| |||| ||||||||||||||| |||||||||||||| || |||||||||||    
T  28890638 attacaaggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 28890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 32068155 - 32068099
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||||| |||| ||||||||||||||| |||||||||||||| || |||||||||||    
T  32068155 attacaaggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 32068099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 13050142 - 13050200
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| |||||||||||||| ||| |||| |||||||||||||||||| || |||||    
T  13050142 gattaacgattacagggacgaaatttaaaattacgcctaattgcaaggacgaaacacat 13050200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 18087707 - 18087757
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||| |||||    
T  18087707 attacagtgaccaatttttaaatgacccctaattgcaaggactaaacacat 18087757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18856014 - 18856064
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggac 51  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||| ||||    
T  18856014 agattaacgattacagggaccaatttttaaatgacccctaattgcagggac 18856064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 23608875 - 23608817
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    |||||| || ||||||||| |||||||||||||| |||| ||||||||||||| |||||    
T  23608875 gattaagaaatacagggaccaatttttaaatgacccctatttgcaaggactaaacacat 23608817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 18086347 - 18086298
Alignment:
Q  11 ttacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    |||||||||| |||||||||| ||| |||||||||||||||||| |||||    
T  18086347 ttacagggaccaatttttaaacgactcctaattgcaaggactaaacacat 18086298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 39274929 - 39274868
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||| ||| ||||||||||| ||||| |||||||||||| || ||||||||||| ||||    
T  39274929 attacagagactaatttttaaataacgccaaattgcaaggacaaaacacatcattaaaccta 39274868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 6571080 - 6571032
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  6571080 gattaacgattacagggaccaatttttaaacgacccctaattgcaagga 6571032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 22871646 - 22871686
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  22871646 attacagggaccaatttttaaatgacccctaattgcaagga 22871686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 25628525 - 25628481
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||||||||||||||||||| || || |||||||||||    
T  25628525 aatttttaaatgacgcctaattgcaagcacgaaacacatcattaa 25628481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 28469369 - 28469417
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  28469369 gattaacgattacagggaccaatttttaaacgacccctaattgcaagga 28469417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 32934407 - 32934351
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||| ||| |||||||||||||| ||||||||||||||  || |||||||||||    
T  32934407 attacagcgactaatttttaaatgacacctaattgcaaggatgaaacacatcattaa 32934351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 22081938 - 22081985
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||||||||||||||| ||||||||||||| || || |||||||||||    
T  22081938 aatttttaaatgacgcataattgcaaggacgaaacaaatcattaagcc 22081985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 32687464 - 32687406
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| ||||||||||| || ||||||||||| ||||||| ||||||| || |||||    
T  32687464 gattaacgattacagggaccaaattttaaatgacccctaattacaaggacaaaacacat 32687406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 13044731 - 13044690
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggac 51  Q
    ||||| |||||||| ||||||||| |||||||||||||||||    
T  13044731 attactgggacgaaattttaaatggcgcctaattgcaaggac 13044690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22828178 - 22828227
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    |||||||| |||||| |||| |||||||||||||| ||||||| ||||||    
T  22828178 agattaacgattacaaggaccaatttttaaatgacccctaattacaagga 22828227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 25453499 - 25453556
Alignment:
Q  14 cagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||| |||||||||||||||| ||||| ||| ||| || ||||||||||| ||||    
T  25453499 cagggactaatttttaaatgacgcttaattacaaagacgaaacacatcattaaaccta 25453556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 25628857 - 25628902
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    |||||||||||||||| ||||||||||||| |  ||||||||||||    
T  25628857 aatttttaaatgacgcataattgcaaggacgagacacatcattaag 25628902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 6253530 - 6253490
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  6253530 attacagggaccaatttttaaacgacccctaattgcaagga 6253490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 10935853 - 10935813
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  10935853 attacagggaccaatttttaaacgacccctaattgcaagga 10935813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 16804014 - 16804054
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  16804014 attacagggaccaatttttaaacgacccctaattgcaagga 16804054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 17102079 - 17102039
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  17102079 attacagggaccaatttttaaacgacccctaattgcaagga 17102039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 27396964 - 27397004
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  27396964 attacagggaccaatttttaaacgacccctaattgcaagga 27397004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 32299074 - 32299114
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  32299074 attacagggaccaatttttaaacgactcctaattgcaagga 32299114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 1e-30; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 11674762 - 11674691
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11674762 gattaacaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaagcctaaa 11674691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 11675024 - 11675093
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11675024 gattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 11675093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 23507786 - 23507857
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507786 gattagcaattacagggacgtatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 23507857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23505120 - 23505050
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23505120 agattagcaattacatggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 23505050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 36325564 - 36325628
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36325564 gattaacaattacagagacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 36325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 36325301 - 36325233
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  36325301 gattaacaattacagggacgaatttttaaacgacccctaattgtaaggactaatcacatcattaagcct 36325233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 234099 - 234168
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  234099 gattaacaattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 234168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 710510 - 710579
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  710510 gattaacaattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 710579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 747722 - 747791
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  747722 gattaacaattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 747791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 871617 - 871686
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  871617 gattaacaattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 871686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 38845629 - 38845700
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  38845629 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaaa 38845700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 2266822 - 2266890
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  2266822 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 2266890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 40775717 - 40775649
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  40775717 gattaacaattacaggaacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 40775649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 15229990 - 15229931
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  15229990 attacagggactaatttttaaatgacgcctaattgcaaggacaaaacacatcattaagcc 15229931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 44664575 - 44664508
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  44664575 gattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacataattaagcc 44664508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 44406924 - 44406854
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||| |||||    
T  44406924 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacctaa 44406854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 7983487 - 7983426
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  7983487 attacagggactaatttttaaatgacgcctaattgcaaggacgaaacacataattaagccta 7983426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15230289 - 15230358
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| | ||||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||||    
T  15230289 agattagcgattacagggactaatttttaaatgacacctaattgcaaggacaaaacacatcattaagcct 15230358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 35634466 - 35634527
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||    
T  35634466 attacagggactaatttttaaatgacgcttaattgcaaggacgaaacacatcattaagccta 35634527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 2266559 - 2266491
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  2266559 gattagcaattacagagacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 2266491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 3041786 - 3041857
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||||  |||| ||||||| ||||||||||    
T  3041786 gattagcaattacagggacgagtttttaaatgccgcctaattgcaagagctaaacacatcaataagcctaaa 3041857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 40775980 - 40776047
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||  ||| ||||||| ||||||    
T  40775980 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatcaataagcc 40776047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 44407187 - 44407254
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  44407187 gattagcaattacagggatgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 44407254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 10445702 - 10445763
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||| |||||||||||||| ||||||||||||||| || ||||||||||| ||||    
T  10445702 attacagggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaaaccta 10445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 44664875 - 44664932
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    ||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  44664875 attacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaag 44664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 8997911 - 8997859
Alignment:
Q  14 cagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  8997911 cagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 8997859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 38845366 - 38845306
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||  ||| |||||||    
T  38845366 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatca 38845306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 41353940 - 41354000
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||| ||||||||||||||||||||||  |||||| || |||||||||||||||    
T  41353940 attacagggactaatttttaaatgacgcctaattataaggacgaaacacatcattaagcct 41354000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 6471736 - 6471686
Alignment:
Q  23 atttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  6471736 atttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctaaa 6471686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 6472395 - 6472441
Alignment:
Q  23 atttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  6472395 atttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 6472441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 35449939 - 35450009
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||  |||  |||||| |||||||||    
T  35449939 gattagcaattacatggacgaatttttaaatgccgcctaattgcaagggataaatacatcaataagcctaa 35450009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 8998068 - 8998113
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    |||||||||||||||||||||||||||||| || ||||||||||||    
T  8998068 aatttttaaatgacgcctaattgcaaggacgaaacacatcattaag 8998113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 3041523 - 3041463
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||| ||||||||||||||||| ||| ||||||||||| |||| |||||||    
T  3041523 gattagcaattacatggacgaatttttaaatgccgcttaattgcaagggctaaacacatca 3041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 37542283 - 37542227
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||| |||||| |||||||||||||||||||||||||| ||| || |||||||||||    
T  37542283 attaaagggactaatttttaaatgacgcctaattgcaaagacgaaacacatcattaa 37542227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 42945481 - 42945537
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||||||| || ||||||||||||||||||||||||||| || || |||||||||||    
T  42945481 attacaggaactaatttttaaatgacgcctaattgcaagaacgaaacacatcattaa 42945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 25124930 - 25124989
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||| ||| |||||||||||||| ||||||||||||||| || ||||| ||||||||    
T  25124930 attacagagactaatttttaaatgacacctaattgcaaggacgaaacacatgattaagcc 25124989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 2535911 - 2535960
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggac 51  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||| ||||    
T  2535911 gattaacgattacagggaccaatttttaaatgacccctaattgcagggac 2535960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 21432752 - 21432695
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    ||||||| ||| |||||||| |||||| |||||||||||||| || ||||||||||||    
T  21432752 attacagagactaatttttatatgacgtctaattgcaaggacgaaacacatcattaag 21432695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 12273214 - 12273262
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  12273214 gattaacgattacagggaccaatttttaaacgacccctaattgcaagga 12273262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 25124622 - 25124566
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||||| |||| ||||||||||||||||||||||||||| || ||  ||||||||||    
T  25124622 attacatggactaatttttaaatgacgcctaattgcaagaacgaaatacatcattaa 25124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 38003773 - 38003829
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||| ||| ||||||||||| ||| |||||||||||||| || |||||||||||    
T  38003773 attacagagactaatttttaaattacgactaattgcaaggacgaaacacatcattaa 38003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 10749869 - 10749927
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| |||||| |||| |||||||||||||  ||||||||||||||| || |||||    
T  10749869 gattaacgattacatggaccaatttttaaatgatccctaattgcaaggacgaaacacat 10749927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 27500437 - 27500486
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggac 51  Q
    ||||||| |||||| |||| |||||||||||||| | |||||||||||||    
T  27500437 gattaacgattacatggaccaatttttaaatgacccataattgcaaggac 27500486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 16388887 - 16388935
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||| |||||||| | || |||||||||||||| ||||||||||||||    
T  16388887 gattagcaattacatgaaccaatttttaaatgacccctaattgcaagga 16388935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 23663612 - 23663564
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| | ||||||||| |||||||||| ||| ||||||||||||||    
T  23663612 gattaacgaatacagggaccaatttttaaacgacccctaattgcaagga 23663564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 39071735 - 39071695
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  39071735 attacagggaccaatttttaaacgacccctaattgcaagga 39071695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 41353621 - 41353577
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||||||||||||||| |||||| || || ||||||||    
T  41353621 aatttttaaatgacgcctaattgtaaggacgaaacatatcattaa 41353577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 1e-30; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 36314365 - 36314294
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36314365 gattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 36314294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 48322707 - 48322777
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48322707 gattaacaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaagcctaa 48322777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 10770557 - 10770486
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10770557 gattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaaacctaaa 10770486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 36314628 - 36314695
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36314628 gattaacaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 36314695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 10770821 - 10770890
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  10770821 gattaacaattacagggacgaatttttaaatgacgcctaattgtaaggactaatcacatcattaaaccta 10770890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 48322444 - 48322375
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  48322444 gattagcaattacagggacgaatttttaaatgatgtctaattgcaaggactaatcacatcattaagccta 48322375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 37778632 - 37778700
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  37778632 gattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 37778700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 8041683 - 8041612
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  8041683 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaaa 8041612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 10294634 - 10294567
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  10294634 gattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 10294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 54466490 - 54466419
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||| ||||||    
T  54466490 gattaacaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacctaaa 54466419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 40788787 - 40788847
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  40788787 attacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 40788847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47921534 - 47921466
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||| ||||||    
T  47921534 agattaacaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatcaataagcc 47921466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13948848 - 13948776
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||| | |||||| |||| ||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  13948848 agattagcgattacatggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcctaaa 13948776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 41422040 - 41421968
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||| |||||||| || ||||||||| |||||||||||||||||||| || ||||||||||| ||||||    
T  41422040 agattaacgattacaggaactaatttttaactgacgcctaattgcaaggacgaaacacatcattaaacctaaa 41421968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 52032506 - 52032566
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||    
T  52032506 attacagggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaagcct 52032566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 54466753 - 54466813
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  54466753 gattaccaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 54466813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 3469567 - 3469630
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||| || |||||||||||||||||||||||||||||| || || |||||||||||||||    
T  3469567 attacaggaactaatttttaaatgacgcctaattgcaaggacgaaacagatcattaagcctaaa 3469630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33156354 - 33156424
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||||| ||||||  ||| |||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  33156354 agattaacgattacaatgactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 33156424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 8041946 - 8042015
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||| ||| ||||    
T  8041946 gattagcaattacagggacgaatatttaaatgccgcctaattgcaagggctaaacacatcaataaaccta 8042015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 29118586 - 29118529
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    ||||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||    
T  29118586 attacagggactaatttttaaatgacgcataattgcaaggacgaaacacatcattaag 29118529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 29686000 - 29685943
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||  |||||||||||    
T  29686000 attacagggactaatttttaaatgacgcctaattgcaaggacgaaatacatcattaag 29685943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32306492 - 32306423
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| | |||||| | || |||||||||||||||||||||||||||||| || |||||||||||||||    
T  32306492 agattagcgattacatgaactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 32306423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 42855676 - 42855733
Alignment:
Q  12 tacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||| |||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  42855676 tacatggactaatttttaaatgacgcctaattgcaagggctaaacacatcattaagcc 42855733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 47551552 - 47551487
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaaca 75  Q
    ||||||||||| ||||||||||||||  |||||||||||||| || ||||||||||||||| ||||    
T  47551552 attacagggactaatttttaaatgacatctaattgcaaggacgaaacacatcattaagccttaaca 47551487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 3469259 - 3469199
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| |||| |||||||||||||||||||||||||| ||| || |||||||||||||||    
T  3469259 attacatggactaatttttaaatgacgcctaattgcaaagacgaaacacatcattaagcct 3469199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 29118905 - 29118965
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| ||| |||||||||||||||||||||||||||||| || |||||||||| ||||    
T  29118905 attacagtgactaatttttaaatgacgcctaattgcaaggacgaaacacatcattatgcct 29118965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 33506317 - 33506377
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||| ||||||||||| ||||||||||| |||||| || |||||||||||||||    
T  33506317 attacagggactaatttttaaataacgcctaattgaaaggacgaaacacatcattaagcct 33506377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 11910758 - 11910695
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||||||  ||||||||||||||| |||||||||||||| || |||||||||||| |||||    
T  11910758 attacagggattaatttttaaatgacgtctaattgcaaggacgaaacacatcattaagactaaa 11910695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 13949074 - 13949121
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||    
T  13949074 aatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 13949121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 52032185 - 52032135
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    |||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  52032185 aatttttaaatgacgcctaattgcaaggacaaaacacatcattaaacctaa 52032135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 33506225 - 33506180
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    |||||||||||||||||||||||||||||| || ||||||||||||    
T  33506225 aatttttaaatgacgcctaattgcaaggacgaaacacatcattaag 33506180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 35643910 - 35643869
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggac 51  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  35643910 attacagggactaatttttaaatgacgcctaattgcaaggac 35643869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 32306803 - 32306847
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||||||||||||||||||||||||||||| || |||||||||||    
T  32306803 aatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 32306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 33154944 - 33154877
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||| |||| || |||||  |||||||    
T  33154944 gattaacgattacagggaccaatttttaaatgacccctaattgcatggacgaaacacatacttaagcc 33154877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1078605 - 1078555
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggac 51  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||| ||||    
T  1078605 agattaacgattacagggaccaatttttaaatgacccctaattgcatggac 1078555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 43607847 - 43607789
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| |||| || |||||    
T  43607847 gattaacgattacagggaccaatttttaaatgacgcttaattgcagggacgaaacacat 43607789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 29686319 - 29686364
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||    
T  29686319 aattttaaaatgacgcctaattgcaaggacgaaacacatcattaag 29686364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 1079582 - 1079626
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgca 46  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||    
T  1079582 gattaacgattacagggaccaatttttaaatgacccctaattgca 1079626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 2796238 - 2796198
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  2796238 attacagggaccaatttttaaatgacccctaattgcaagga 2796198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 3596156 - 3596112
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||| |||||||||||||||||| || |||||||||||    
T  3596156 aatttttaaatcacgcctaattgcaaggacgaaacacatcattaa 3596112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 4322644 - 4322588
Alignment:
Q  17 ggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||||||||||| |||||||||||||| ||   || ||||||||||||||||||    
T  4322644 ggacgaatttttaaacgacgcctaattgcaggggtgaaacacatcattaagcctaaa 4322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 4323571 - 4323607
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgca 46  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4323571 attacagggacgaatttttaaacgacgcctaattgca 4323607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 10294926 - 10294986
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||||| || ||||||||||| ||| || ||||||||||| || |||||||||||||||    
T  10294926 attacaggaactaatttttaaattacgtctgattgcaaggacgaaacacatcattaagcct 10294986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 34142580 - 34142627
Alignment:
Q  3 attaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    |||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  34142580 attaacgattacagggaccaatttttaaacgacccctaattgcaagga 34142627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 14634123 - 14634165
Alignment:
Q  12 tacagggacgaatttttaaatgacgcctaattgcaaggactaa 54  Q
    ||||||||| |||||||||||||| |||| |||||||||||||    
T  14634123 tacagggaccaatttttaaatgacccctatttgcaaggactaa 14634165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 9368670 - 9368711
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggac 51  Q
    ||||||||||| |||||||||| ||| |||||||||||||||    
T  9368670 attacagggaccaatttttaaacgacccctaattgcaaggac 9368711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19741252 - 19741301
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    |||||| | ||||||||||| |||||||||| ||| ||||||||||||||    
T  19741252 agattagcgattacagggaccaatttttaaacgacccctaattgcaagga 19741301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 40788479 - 40788418
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||| |||||| ||||||||||| |||| ||||||||||||  || ||||||||||| ||||    
T  40788479 attagagggactaatttttaaataacgcttaattgcaaggaagaaacacatcattaacccta 40788418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 23276352 - 23276388
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgca 46  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  23276352 attacagggaccaatttttaaatgacccctaattgca 23276388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 25108456 - 25108500
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgca 46  Q
    ||||| ||||||||||||| || ||||||||||| ||||||||||    
T  25108456 gattagcaattacagggaccaaattttaaatgacccctaattgca 25108500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 2e-29; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 24905234 - 24905165
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24905234 gattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 24905165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 28011698 - 28011766
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28011698 gattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 28011766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 40714511 - 40714440
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  40714511 gattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaa 40714440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 52134398 - 52134465
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  52134398 gattaacaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 52134465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 17189013 - 17188954
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  17189013 attacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 17188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 49955706 - 49955777
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||| ||||||  ||| |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  49955706 gattaacgattacaaagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaa 49955777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 37929474 - 37929416
Alignment:
Q  13 acagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  37929474 acagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 37929416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 52134135 - 52134065
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||| |||| ||||||| |||||||||    
T  52134135 gattagcaattacagggacgaatttttaaataccgcctaattgcaagggctaaacacatcaataagcctaa 52134065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 33442924 - 33442989
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||    
T  33442924 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataag 33442989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 40714810 - 40714871
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||| |||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  40714810 attacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 40714871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 8898576 - 8898516
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  8898576 attacagtgactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 8898516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 25885360 - 25885420
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  25885360 attacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 25885420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 31051009 - 31050945
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaac 74  Q
    ||||||| ||| ||||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  31051009 attacagagactaatttttaaataacgcctaattgcaaggacgaaacacatcattaagcctaaac 31050945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 17189218 - 17189277
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||    
T  17189218 attacagggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaagcc 17189277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 30326555 - 30326496
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  30326555 attacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 30326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 31514384 - 31514325
Alignment:
Q  3 attaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||    
T  31514384 attaacaattacaggaacgaatttttaaatgccgcctaattgcaagggctaaacacatca 31514325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 33442661 - 33442594
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  33442661 gattagcaattacagagacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 33442594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 49955406 - 49955347
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||    
T  49955406 attacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 49955347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 45750221 - 45750270
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  45750221 aatttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 45750270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 8898884 - 8898944
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| ||| |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  8898884 attacagagactaatttttaaatgacgcctaattacaaggacgaaacacatcattaagcct 8898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 20760872 - 20760932
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| ||| ||||||||||||||||||||||| |||||| || |||||||||||||||    
T  20760872 attacagagactaatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcct 20760932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 31514647 - 31514707
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||||||||||||||||||||| |||||||||| |||| |||| |||||||    
T  31514647 gattagcaattacagggacgaatttttaaatgccgcctaattgtaagggctaaacacatca 31514707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 45749909 - 45749841
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| ||||||  ||| |||||||||||||||||||||||||||||  || |||||||||||||||    
T  45749909 gattaacgattacaaagactaatttttaaatgacgcctaattgcaaggatgaaacacatcattaagcct 45749841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 28325182 - 28325232
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    |||||||||||||||||||||||||||| | || |||||||||||||||||    
T  28325182 aatttttaaatgacgcctaattgcaaggccgaaacacatcattaagcctaa 28325232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 4716535 - 4716475
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||| ||||||||||||||||| | ||||||||||||| |||| |||||||    
T  4716535 gattagcaattacatggacgaatttttaaatgccacctaattgcaagggctaaacacatca 4716475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 7371536 - 7371596
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| || |||||| ||||||||    
T  7371536 attacagagactaatttttaaatgacgtctaattgcaaggacgaaacacatcgttaagcct 7371596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 24905497 - 24905560
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||| |||||||||| ||||||||||||| ||  | ||||||||||||||||||||||||||||    
T  24905497 gattagcaattacagg-acgaatttttaaacgatccataattgcaaggactaatcacatcattaa 24905560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 32558486 - 32558536
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||||||||||||| ||||||| |||||| || |||||||||||||||||    
T  32558486 aatttttaaatgacgtctaattgtaaggacaaaacacatcattaagcctaa 32558536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 12906026 - 12906087
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||| |||| ||||||||||||| | | |||||||||||| || ||||||||||||||||    
T  12906026 attacatggactaatttttaaatgatgtcaaattgcaaggacgaaacacatcattaagccta 12906087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31058415 - 31058484
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| | ||||||  ||| ||||||||||||| | |||||||||||||| || |||||||||||||||    
T  31058415 agattatcgattacattgactaatttttaaatgatgtctaattgcaaggacgaaacacatcattaagcct 31058484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 44523517 - 44523562
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    ||||||||||||| |||||||||||||||| || ||||||||||||    
T  44523517 aatttttaaatgaggcctaattgcaaggacgaaacacatcattaag 44523562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 25647951 - 25647903
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  25647951 gattaacgattacagggaccaatttttaaacgacccctaattgcaagga 25647903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 25884745 - 25884697
Alignment:
Q  25 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||||||| |||||||||| ||| || ||||||||||||||||||    
T  25884745 ttttaaatgacgtctaattgcaatgacgaaacacatcattaagcctaaa 25884697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 35040981 - 35041037
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||||| |||| ||||||||||||||| |||||| ||||||| || |||||||||||    
T  35040981 attacatggactaatttttaaatgacggctaattacaaggacgaaacacatcattaa 35041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 35473690 - 35473627
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||||||| |||||||||| ||| |||||||||||||| |||  ||||  |||||||||||    
T  35473690 attacagggaccaatttttaaacgacccctaattgcaaggattaaatacatatttaagcctaaa 35473627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 7371337 - 7371288
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||||||||||| ||||||||||||||| || || |||||||| ||||    
T  7371337 aatttttaaatgacacctaattgcaaggacgaaacatatcattaaaccta 7371288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 28324849 - 28324804
Alignment:
Q  25 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| ||||||||||||||||||  || |||||||||||||||    
T  28324849 ttttaaacgacgcctaattgcaaggaggaaacacatcattaagcct 28324804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 35038522 - 35038453
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||| |||||| |||  |||||||||||||| | ||||||||||||| || ||||| ||||| ||||    
T  35038522 gattaacgattacatggatcaatttttaaatgacccttaattgcaaggacgaaacacattattaaaccta 35038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 44522214 - 44522145
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||| ||||||||| | |||||||||||||  |||||||||| |||| || |||||  |||||||||    
T  44522214 gattaacgattacagggtccaatttttaaatgatccctaattgcagggacgaaacacatacttaagccta 44522145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 6367621 - 6367581
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  6367621 attacagggaccaatttttaaacgacccctaattgcaagga 6367581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 26024761 - 26024801
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  26024761 attacagggaccaatttttaaacgacccctaattgcaagga 26024801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 28011430 - 28011390
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaat 42  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  28011430 gattagcaattacagggacgaatttttaaacgacccctaat 28011390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 21076 - 21008
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21076 gattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 21008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 21299 - 21366
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  21299 gattagcaattacagggacgaatttttaaacgacctctaattgcaaggactaatcacatcattaagcc 21366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 9e-29; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 22567116 - 22567184
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22567116 gattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 22567184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 9400586 - 9400519
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9400586 gattagcaattacagggacgaatttttaaatgacacctaattgcaaggactaatcacatcattaagcc 9400519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 27934848 - 27934907
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27934848 gattagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatc 27934907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 42738098 - 42738028
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  42738098 gattaacaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaa 42738028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 9400849 - 9400914
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  9400849 gattagcaattacagggacgaatttttaaacgacccctaattgcaaggactaatcacatcattaag 9400914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4982794 - 4982726
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  4982794 agattagcaattacatggacgaatttttaaattacgtctaattgcaaggactaatcacatcattaagcc 4982726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 27069269 - 27069337
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  27069269 gattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 27069337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 27934599 - 27934531
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  27934599 gattagcaattacagggacaaatttttaaacgacccctaattgcaaggactaatcacatcattaagcct 27934531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 4983056 - 4983123
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4983056 gattagcaattacaaggatgaatttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 4983123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 51203676 - 51203607
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  51203676 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 51203607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 34837141 - 34837073
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  34837141 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 34837073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 42738361 - 42738429
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  42738361 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 42738429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 54858619 - 54858559
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  54858619 attacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 54858559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 54858919 - 54858987
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  54858919 gattaacgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 54858987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 32950472 - 32950543
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||| |||| ||||||| ||||||||||    
T  32950472 gattagcaattacagggacgaatttttaaatgccacctaattgcaagggctaaacacatcaataagcctaaa 32950543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 34837404 - 34837475
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  34837404 gattagcaattacagagacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaaa 34837475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 38012500 - 38012567
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  38012500 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 38012567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 16605661 - 16605600
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  16605661 attacagggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaagccta 16605600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 50504184 - 50504253
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||| ||||||| ||| |||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  50504184 gattaacgattacagagactaatttttaaatgacgcctaattacaaggacgaaacacatcattaagccta 50504253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 3032641 - 3032581
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  3032641 attacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 3032581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 9144833 - 9144773
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  9144833 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 9144773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 9145096 - 9145164
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  9145096 gattagcaattacagggacgcatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 9145164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 11524016 - 11523952
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||    
T  11524016 gattaacgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 11523952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 27149355 - 27149422
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||    
T  27149355 gattagcaattacagggactaatttt-aaatgacgcctaattgcaaggacgaaacacatcattaagcct 27149422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 32950209 - 32950141
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  32950209 gattagcaattactgggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 32950141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 33247603 - 33247667
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||| |||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||    
T  33247603 gattagcaattacagggacggatttttaaacgatccctaattgcaaggactaatcacatcattaa 33247667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 45463432 - 45463496
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||    
T  45463432 gattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacatatcattaa 45463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 52573595 - 52573655
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  52573595 attacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 52573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 10408256 - 10408315
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||| |||||||||    
T  10408256 attacagggactaatttttaaatgacgcctaattgcaaggacgaaacacaacattaagcc 10408315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 27068969 - 27068906
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||||||| ||||||||||||| |||||||||||||||| || |||||| |||||||||||    
T  27068969 attacagggactaatttttaaatgatgcctaattgcaaggacgaaacacatccttaagcctaaa 27068906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 38012237 - 38012170
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| || | ||||||| ||||||    
T  38012237 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctgaacacatcaataagcc 38012170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 52573287 - 52573224
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||| || |||||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  52573287 attacaggtactaatttttaaatgacgcctaattgcaaagacgaaacacatcattaagcctaaa 52573224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 33247341 - 33247287
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatc 56  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  33247341 gattagcaattacagggacgaatttttaaatgacacctaattgcaaggattaatc 33247287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39701267 - 39701337
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||||| ||||||  ||| |||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  39701267 agattaacgattacatagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 39701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 45463132 - 45463075
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    ||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  45463132 attacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaag 45463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 5818134 - 5818198
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||| ||||||||||| |||||||||||||||||||||| ||| ||| || |||||||||||    
T  5818134 gattaacgattacagggactaatttttaaatgacgcctaattacaaagacgaaacacatcattaa 5818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 10407948 - 10407889
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||  |||||||||||||| ||||||||||||||| || ||||||||||||||    
T  10407948 attacagggagtaatttttaaatgactcctaattgcaaggacgaaacacatcattaagcc 10407889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 22566866 - 22566797
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||| ||||||||||||| ||  ||||||| |||||||||||||| | ||||||||||    
T  22566866 gattagcaattacaggaacgaatttttaaacgatccctaattacaaggactaatcactttattaagccta 22566797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 27891643 - 27891582
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||||||| ||||||||||| | | |||||||||||||| || ||||||||||||||||    
T  27891643 attacagggactaatttttaaataatgtctaattgcaaggacgaaacacatcattaagccta 27891582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50503893 - 50503824
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||||| |||||| ||||  |||||||||||| |||||||||| ||||| || |||||||||||||||    
T  50503893 agattaacgattacatggactgatttttaaatgatgcctaattgcgaggacgaaacacatcattaagcct 50503824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 22987218 - 22987278
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| |||| ||||||||||||||| ||||||| |||||| || |||||||||||||||    
T  22987218 attacatggactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaagcct 22987278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 39667135 - 39667199
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||| ||||||||||| |||||||||||||| | ||||| ||||||| || |||||||||||    
T  39667135 gattaacgattacagggaccaatttttaaatgacccgtaattacaaggacgaaacacatcattaa 39667199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 51859785 - 51859835
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||||||||| ||| |||||||||||||| || |||||||||||||||||    
T  51859785 aatttttaaattacgtctaattgcaaggacgaaacacatcattaagcctaa 51859835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 7451901 - 7451853
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  7451901 gattaacgattacagggaccaatttttaaacgacccctaattgcaagga 7451853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 22717998 - 22717942
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||||| |||| ||||||||||||||| ||||||| |||||| || |||||||||||    
T  22717998 attacatggactaatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 22717942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 49879274 - 49879226
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||| ||||||||||||| |||||||||| ||| ||||||||||||||    
T  49879274 gattagcaattacagggaccaatttttaaacgacccctaattgcaagga 49879226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 50418735 - 50418687
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  50418735 gattaacgattacagggaccaatttttaaacgacccctaattgcaagga 50418687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 50750946 - 50750910
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgca 46  Q
    |||||||||||||||||||||| ||||||||||||||    
T  50750946 attacagggacgaatttttaaacgacgcctaattgca 50750910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 50751873 - 50751929
Alignment:
Q  17 ggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||||||||||| |||||||||||||| ||   || ||||||||||||||||||    
T  50751873 ggacgaatttttaaacgacgcctaattgcaggggtgaaacacatcattaagcctaaa 50751929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 79
Target Start/End: Complemental strand, 33247085 - 33247054
Alignment:
Q  48 ggactaatcacatcattaagcctaaacatatt 79  Q
    ||||||||||||||||||||||||||||||||    
T  33247085 ggactaatcacatcattaagcctaaacatatt 33247054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 22718298 - 22718339
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaatt 43  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  22718298 gattaacaattacagagagtaatttttaaatgacgcctaatt 22718339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 22986918 - 22986877
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaatt 43  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  22986918 gattaacaattacagagagtaatttttaaatgacgcctaatt 22986877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 6237181 - 6237233
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaa 54  Q
    ||||| ||||||||| ||| || |||||||||||||||||||| ||| |||||    
T  6237181 gattagcaattacagagactaaattttaaatgacgcctaattgtaagaactaa 6237233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 24711170 - 24711130
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  24711170 attacagggaccaatttttaaacgacccctaattgcaagga 24711130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 37248574 - 37248614
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  37248574 attacagggaccaatttttaaacgacccctaattgcaagga 37248614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 14196681 - 14196614
Alignment:
Q  3 attaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14196681 attagcaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 14196614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 25486020 - 25485949
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  25486020 gattagcaattacagggacgaatttttaaatgacgcttaattgcaaggactaatcacatcattaaacctaaa 25485949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 14196945 - 14197011
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagc 68  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14196945 gattagcaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaagc 14197011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 362937 - 362869
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  362937 gattaacaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 363160 - 363227
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  363160 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 363227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 31406945 - 31406878
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  31406945 gattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacattattaagcc 31406878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 7905310 - 7905244
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagc 68  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  7905310 gattaacgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 7905244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 32593549 - 32593488
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  32593549 attatagggactaatttttaaatgacgcctaattgaaaggactaaacacatcattaagccta 32593488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 10781211 - 10781143
Alignment:
Q  5 taacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||| ||| ||||||| ||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  10781211 taacgattgcagggactaatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcctaaa 10781143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 25486256 - 25486324
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||| ||||| || ||||||||||||| || ||||||||||||    
T  25486256 gattagcaattacagggacgaatttttaaacgacgcttagttgcaaggactaaccatatcattaagcct 25486324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 28000452 - 28000380
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaac 74  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||| ||| |||||||    
T  28000452 gattagcaattaaagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaacctaaac 28000380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 31407245 - 31407301
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  31407245 attacagggactaatttttaaatgacgcctaattgcaaggacgaagcacatcattaa 31407301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 22502833 - 22502770
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||| |||| |||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  22502833 attacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctaaa 22502770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 7160863 - 7160802
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  7160863 attacagagactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 7160802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15913906 - 15913978
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||| |||| | |||| |||||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  15913906 agattaacgattatatggacaaatttttaaatgacccttaattgcaaggacgaaacacatcattaagcctaaa 15913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 22367492 - 22367424
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||| | ||| |||||| |||||||    
T  22367492 gattagcaattacagggacgaatttttaaatgctgcctaattgcaagggcaaataacatcaataagcct 22367424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 22373018 - 22373086
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| | ||  |||||| |||||||    
T  22373018 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggcaaaaaacatcaataagcct 22373086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 22503141 - 22503201
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| |||| |||||||||||||||||||||||||||||| || ||||| |||||||||    
T  22503141 attacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacattattaagcct 22503201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 6517550 - 6517503
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||    
T  6517550 aatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 6517503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 7161171 - 7161234
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  7161171 attatagggactaatttttaaatgacgcctaattgcaaggacgaaatatatcattaagcctaaa 7161234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 21836409 - 21836460
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  21836409 aatttttaaatgacgcctaattgcaaggatgaaacacatcattaagcctaaa 21836460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 28000716 - 28000783
Alignment:
Q  3 attaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||| ||||||||| ||| |||||||||||| ||||||||||||||| |||| || |||| |||||||    
T  28000716 attagcaattacagagacaaatttttaaatgccgcctaattgcaagggctaaacagatcaataagcct 28000783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 7905610 - 7905666
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    |||| |||||| ||||| |||||||| ||||||||||||||| || |||||||||||    
T  7905610 attatagggacaaatttataaatgacacctaattgcaaggacgaaacacatcattaa 7905666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 15913614 - 15913546
Alignment:
Q  3 attaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||| ||||||||  ||| ||||||||||||||||||||||||||  || || ||||||||||| ||||    
T  15913614 attagcaattacaaagactaatttttaaatgacgcctaattgcaataacgaaacacatcattaaaccta 15913546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 21836079 - 21836035
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||||||||||||||||||| || || |||||||||||    
T  21836079 aatttttaaatgacgcctaattgcaagaacgaaacacatcattaa 21836035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 30337787 - 30337827
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  30337787 attacagggaccaatttttaaatgacccctaattgcaagga 30337827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 24210598 - 24210557
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaatt 43  Q
    ||||||||||||||| ||| |||||||||||||| |||||||    
T  24210598 gattaacaattacagagaccaatttttaaatgacccctaatt 24210557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 26463246 - 26463165
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaacatatttata 83  Q
    ||||||| | ||||||||| |||||||||| ||| |||||||||| |||  ||  ||||  ||||||||||| |||||||||    
T  26463246 gattaacgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagcctaaaaatatttata 26463165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 26464560 - 26464604
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgca 46  Q
    ||||||||| ||||||||| | |||||||||||| ||||||||||    
T  26464560 gattaacaaatacagggaccattttttaaatgacccctaattgca 26464604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 30337508 - 30337468
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  30337508 attacagggaccaatttttaaacgacccctaattgcaagga 30337468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 6758196 - 6758263
Alignment:
Q  3 attaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6758196 attaacaattacagggacgaatttttaaacgacgcctaattgcaaggactaatcacatcattaagcct 6758263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 41930846 - 41930910
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41930846 gattagcaattacagggacgaatttttaaatgacgcctaattacaaggactaatcacatcattaa 41930910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 297081 - 297011
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  297081 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaa 297011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 1506034 - 1505964
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  1506034 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaa 1505964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 17544407 - 17544476
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  17544407 gattaacgattacaggaactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 17544476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 6757932 - 6757876
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcac 58  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6757932 gattagcaattacagggacaaatttttaaatgacgcctaattgcaaggactaatcac 6757876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 41930583 - 41930515
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||||||| |||||||||| |||  |||||||||||||||||||||||||||||||||    
T  41930583 gattagcaattacagggacaaatttttaaacgacctctaattgcaaggactaatcacatcattaagcct 41930515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 8875516 - 8875449
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||    
T  8875516 gattaacgattacagggactaatttttaaatgacgcttaattgcaaggacgaaacacatcattaagcc 8875449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 31482469 - 31482402
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  31482469 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 31482402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 8875626 - 8875687
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcat 63  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  8875626 gattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcat 8875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 1506297 - 1506357
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  1506297 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatca 1506357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 31482732 - 31482800
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  31482732 gattagcaattacagggacaaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 31482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 20153282 - 20153343
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||| |||| |||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  20153282 attacaaggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaagccta 20153343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 297344 - 297404
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| |||| |||||||    
T  297344 gattagcaattacagggacgaatttttaaatgtcgcctaattacaagggctaaacacatca 297404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 33871705 - 33871765
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| ||| |||||||||||| ||||||||||||||||| || |||||||||||||||    
T  33871705 attacagagactaatttttaaatggcgcctaattgcaaggacgaaacacatcattaagcct 33871765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 33871398 - 33871339
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||| |||||||||||||| | ||||||||||||| || ||||||||||||||    
T  33871398 attacagggactaatttttaaatgacacttaattgcaaggacaaaacacatcattaagcc 33871339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 20152840 - 20152781
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||| ||| |||||||||||||||| |||||||| |||| || ||||||||||||||    
T  20152840 attacagagactaatttttaaatgacgcttaattgcatggacgaaacacatcattaagcc 20152781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 24141519 - 24141461
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||| |||| || |||||    
T  24141519 gattaacgattacagggaccaatttttaaatgacgtctaattgcagggacgaaacacat 24141461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 40150175 - 40150233
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||||| || |||||    
T  40150175 gattaacgattacagggaccaattttaaaatgacccctaattgcaaggacgaaacacat 40150233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 3529203 - 3529251
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  3529203 gattaacgattacagggaccaatttttaaacgacccctaattgcaagga 3529251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 3656797 - 3656845
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||||||| |||||||||||| | || |||||||||||||||    
T  3656797 aatttttaaatgacgtctaattgcaaggtcgaaacacatcattaagcct 3656845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 13962931 - 13962883
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||| ||||||||||||| |||||||||| ||| ||||||||||||||    
T  13962931 gattagcaattacagggaccaatttttaaacgacccctaattgcaagga 13962883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 39453670 - 39453708
Alignment:
Q  12 tacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  39453670 tacagggaccaatttttaaatgacccctaattgcaagga 39453708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 22298601 - 22298564
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaa 47  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  22298601 attacatggactaatttttaaatgacgcctaattgcaa 22298564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 3528940 - 3528892
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||| ||| ||||||||| |||||||||| ||| ||||||||||||||    
T  3528940 gattagcaaatacagggaccaatttttaaacgacccctaattgcaagga 3528892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 5993948 - 5993908
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  5993948 attacagggaccaatttttaaacgacccctaattgcaagga 5993908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 11761808 - 11761768
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  11761808 attacagggaccaatttttaaacgacccctaattgcaagga 11761768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 16157216 - 16157264
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| |||| |||||| |||||||||| ||| ||||||||||||||    
T  16157216 gattaacgattatagggaccaatttttaaacgacccctaattgcaagga 16157264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 20840600 - 20840552
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| |||||||| || |||||||||| ||| ||||||||||||||    
T  20840600 gattaacgattacaggtaccaatttttaaacgacccctaattgcaagga 20840552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 27587207 - 27587167
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  27587207 attacagggaccaatttttaaacgacccctaattgcaagga 27587167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 38475360 - 38475408
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| |||||| |||| |||||||||| ||| ||||||||||||||    
T  38475360 gattaacgattacatggaccaatttttaaacgacccctaattgcaagga 38475408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 42067885 - 42067929
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgca 46  Q
    ||||| ||||||||||||| || ||||||||||| ||||||||||    
T  42067885 gattatcaattacagggaccaaattttaaatgacccctaattgca 42067929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 6e-27; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 14900563 - 14900494
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14900563 gattagcaattacagggacgaatttttgaatgacgcctaattgcaaggactaatcacatcattaagccta 14900494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 14900811 - 14900879
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14900811 gattagcaattacagggacaaatttttaaacgacccctaattgcaaggactaatcacatcattaagcct 14900879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 13995740 - 13995670
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  13995740 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaa 13995670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 13996003 - 13996072
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  13996003 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 13996072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 1695807 - 1695739
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  1695807 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 1695739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 33062117 - 33062049
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  33062117 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 33062049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 33062380 - 33062448
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  33062380 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 33062448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 33739770 - 33739702
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  33739770 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 33739702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 28226111 - 28226170
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  28226111 attacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 28226170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 11830431 - 11830365
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagc 68  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||    
T  11830431 gattagcaattacagggactaatttttaaatgacgtctaattgcaaggacgaaacacatcattaagc 11830365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 33740033 - 33740103
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 72  Q
    ||||| |||||||||||||||||||||||||| |||||||||| |||| |||| ||||||| |||||||||    
T  33740033 gattagcaattacagggacgaatttttaaatgccgcctaattgtaagggctaaacacatcaataagcctaa 33740103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 41248889 - 41248958
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||  ||| ||||||| ||||||||    
T  41248889 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatcaataagccta 41248958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 8710835 - 8710895
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    |||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  8710835 attacatggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 8710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 15604398 - 15604338
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||||    
T  15604398 attacagggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaagcct 15604338  T

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Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 41248626 - 41248557
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||| ||| ||||    
T  41248626 gattagcaattacagggatgaatttttaaatgccgcctaattgcaagggctaaacacatcaataaaccta 41248557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 1696070 - 1696130
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatca 62  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||    
T  1696070 gattagcaattacaggaacgaatttttaaatgccgcctaattgcaagggctaaacacatca 1696130  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6573115 - 6573045
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||| | |||||| |||| ||||||||||||||||||||||||| |||| || ||||||||||| ||||    
T  6573115 agattagcgattacatggacaaatttttaaatgacgcctaattgcagggacgaaacacatcattaaaccta 6573045  T

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Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 41588425 - 41588483
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagc 68  Q
    ||||||||||| ||||||||||||||||||||||| |||||| || ||||| |||||||    
T  41588425 attacagggactaatttttaaatgacgcctaattgtaaggacgaaacacattattaagc 41588483  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 6573602 - 6573541
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    |||||| |||||||||||||||||||||||||||| | |||  || ||||||||||||||||    
T  6573602 attacatggacgaatttttaaatgacgcctaattggagggatgaaacacatcattaagccta 6573541  T

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Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 8342254 - 8342185
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| ||||||||  ||| |||||||||||||||| ||||||||||||| || ||||||||||| ||||    
T  8342254 gattaccaattacatagactaatttttaaatgacgcttaattgcaaggacgaaacacatcattaaaccta 8342185  T

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Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 8342546 - 8342615
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc-taaacatat 78  Q
    ||||||| ||| ||||||||||||||||||||||| |||||| || ||||||||||| || |||||||||    
T  8342546 attacagagactaatttttaaatgacgcctaattgtaaggacgaaacacatcattaaaccttaaacatat 8342615  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 15604706 - 15604762
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||| | |||||||||||| ||||||||||||||| || |||||||||||    
T  15604706 attacagggactagtttttaaatgacacctaattgcaaggacaaaacacatcattaa 15604762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 41587301 - 41587234
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 70  Q
    ||||||| |||||||| || |||||||||||||| | ||||||||||||| || |||||||||||||||    
T  41587301 gattaacgattacagg-accaatttttaaatgactcttaattgcaaggacgaaacacatcattaagcct 41587234  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 28228737 - 28228666
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||| |||| || |||||  | |||||||||    
T  28228737 gattaacgattacagggaccaatttttaaatgacccctaattgcagggacgaaacacatattaaagcctaaa 28228666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 44714122 - 44714170
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||| ||||||||||||| |||||||||| ||| ||||||||||||||    
T  44714122 gattagcaattacagggactaatttttaaacgacccctaattgcaagga 44714170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 199088 - 199030
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| |||||||| || |||||||||||||  |||||||||| ||||||| |||||    
T  199088 gattaacgattacaggaactaatttttaaatgatccctaattgcagggactaaacacat 199030  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 202717 - 202775
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacat 60  Q
    ||||||| |||||| ||||||||||||||||||| ||||||| || |||| || |||||    
T  202717 gattaacgattacatggacgaatttttaaatgacccctaattacagggacaaaacacat 202775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 16099114 - 16099076
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaag 48  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  16099114 attacagggaccaatttttaaatgacccctaattgcaag 16099076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 11163392 - 11163432
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  11163392 attacagggaccaatttttaaacgacccctaattgcaagga 11163432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 15848147 - 15848107
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  15848147 attacagggaccaatttttaaacgacccctaattgcaagga 15848107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 39498377 - 39498329
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||| ||||||    
T  39498377 gattaacgattacagggaccaatttttaaacgacccctaattacaagga 39498329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 12598 - 12669
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  12598 gattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctaaa 12669  T

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Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 11499 - 11568
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||||||  || ||||||||||||||||    
T  11499 gattaacgattacatggactaatttttaaatgacgcctaattgcaaggatgaaacacatcattaagccta 11568  T

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Target: scaffold0024 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 141924 - 141993
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  141924 gattagcaattacagggatgaatttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 141993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 141661 - 141592
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 71  Q
    ||||| |||||||||||||||||||||||||| || |||||||||||| |||| ||||||| ||| ||||    
T  141661 gattagcaattacagggacgaatttttaaatgccgtctaattgcaagggctaaacacatcaataaaccta 141592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 988 - 916
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||| | |||||| |||| ||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  988 agattagcgattacatggactaatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcctaaa 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 1214 - 1261
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||    
T  1214 aatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 1300 - 1233
Alignment:
Q  2 gattaacaattacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 69  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||  ||| ||||||| ||||||    
T  1300 gattagcaattacagggacgaatttttaaatgccgcctaattgcaagggttaaacacatcaataagcc 1233  T

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Target: scaffold0006 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 222168 - 222219
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  222168 aatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaa 222219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 221838 - 221794
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaa 66  Q
    ||||||||||||||||||||||||||| || || |||||||||||    
T  221838 aatttttaaatgacgcctaattgcaagaacgaaacacatcattaa 221794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 2452 - 2389
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 73  Q
    ||||||||||  ||||||||||||||| |||||||||||||| || |||||||||||| |||||    
T  2452 attacagggattaatttttaaatgacgtctaattgcaaggacgaaacacatcattaagactaaa 2389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 69024 - 68984
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  69024 attacagggaccaatttttaaatgacccctaattgcaagga 68984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 12159 - 12204
Alignment:
Q  22 aatttttaaatgacgcctaattgcaaggactaatcacatcattaag 67  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||    
T  12159 aatttttaaatgacgtttaattgcaaggacgaaacacatcattaag 12204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2101 - 2150
Alignment:
Q  1 agattaacaattacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    |||||| ||||| ||||||| |||||||||| ||| ||||||||||||||    
T  2101 agattagcaatttcagggaccaatttttaaacgacccctaattgcaagga 2150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 139731 - 139691
Alignment:
Q  10 attacagggacgaatttttaaatgacgcctaattgcaagga 50  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  139731 attacagggaccaatttttaaacgacccctaattgcaagga 139691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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