View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1459_low_84 (Length: 312)
Name: NF1459_low_84
Description: NF1459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1459_low_84 |
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Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 25840527 - 25840217
Alignment:
| Q |
1 |
atttatcattatttgtagataattataattaaagttaaatattttttatcaacattggatatatttggaatcacaatgcaacttgacaaagtatatcact |
100 |
Q |
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| T |
25840527 |
atttatcattatttgtagataattataattaaagttaaatattttttatcaacattggatatatttggaatcacaatgcaacttgacaaagtatatcact |
25840428 |
T |
|
| Q |
101 |
gtataacacttgaaattctaaaatgtagattgtccaaaaccacagaccctaattttgctaaactcactaggaatttgatacgtaaaatttggggtttggc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25840427 |
gtataacacttgaaattctaaaatgtagattgtccaaaaccacggaccctaattttgctaaactcactaggaatttgatacgtaaaatttggggtttggc |
25840328 |
T |
|
| Q |
201 |
attgacttgaagagtgcaa-atttgtttctgtatcaatcggtgctttcattgagagaacctcctatgacatacccgtatcactcatcctacattactcca |
299 |
Q |
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||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25840327 |
attgacttgaagagtgcaatttttttttctgtatcaatcggtgctttcattgagagaacctcctatgacatacccgtatcactcatcctacattactcca |
25840228 |
T |
|
| Q |
300 |
tattcttcgac |
310 |
Q |
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| || |||||| |
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| T |
25840227 |
tcttattcgac |
25840217 |
T |
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