View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14602_high_2 (Length: 679)

Name: NF14602_high_2
Description: NF14602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14602_high_2
NF14602_high_2
[»] chr5 (3 HSPs)
chr5 (322-658)||(16053403-16053727)
chr5 (1-247)||(16053102-16053348)
chr5 (112-216)||(42563729-42563836)
[»] chr3 (20 HSPs)
chr3 (513-647)||(36309760-36309893)
chr3 (519-655)||(36321276-36321412)
chr3 (40-230)||(36325811-36326001)
chr3 (517-650)||(36328106-36328239)
chr3 (501-626)||(36333929-36334054)
chr3 (501-652)||(36313852-36314000)
chr3 (516-650)||(30227292-30227426)
chr3 (518-650)||(30201117-30201249)
chr3 (351-429)||(36309620-36309698)
chr3 (516-650)||(30223041-30223175)
chr3 (516-650)||(30230282-30230416)
chr3 (40-230)||(36313433-36313623)
chr3 (519-589)||(29751856-29751926)
chr3 (517-650)||(29856790-29856923)
chr3 (181-230)||(36309477-36309526)
chr3 (516-575)||(30239053-30239112)
chr3 (113-167)||(29649466-29649520)
chr3 (153-230)||(36327788-36327865)
chr3 (517-589)||(29649039-29649111)
chr3 (190-230)||(36320984-36321024)
[»] chr7 (2 HSPs)
chr7 (516-650)||(16644743-16644877)
chr7 (516-650)||(17619104-17619238)
[»] chr8 (1 HSPs)
chr8 (518-650)||(14934506-14934638)
[»] chr1 (1 HSPs)
chr1 (511-650)||(16955662-16955801)


Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 322 - 658
Target Start/End: Original strand, 16053403 - 16053727
Alignment:
Q  322 gagtacttattagctatgcaattaagaatatca---ttgccgaatccctcaatatcgatgtcttccaactgattgcagcttcgttcaatagcattgcaac 418  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  16053403 gagtacttattagctatgcaattaagaatatcatcattgccgaatccctcaatatcaatgtcttccaaatgattgcagcttcgttcaatagcattgcaac 16053502  T
Q  419 aaatcttcaccatttcctctttatcataatcattattggacaccctcccaaagaaaaaattattatagtatgaactataatcgcacatgcagatagagcg 518  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||          
T  16053503 aaatcttcaccatttcctctttatcataatcattattggacaccttccaaaagaaaaaattattatagtatgaactataatcgcacatgcagat------ 16053596  T
Q  519 ccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatatttgat 618  Q
             |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16053597 ---------aggatccttgcaaatgttccaccaaagagggcacactccgcatgcacttgttaaaatttcaaatgcaccaagcctctgaaggatatttgat 16053687  T
Q  619 gtcaaatctctaggaagatcaagccaatttggtcctgctg 658  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16053688 gtcaaatctctaggaagatcaagccaatttggtcctgctg 16053727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 16053102 - 16053348
Alignment:
Q  1 atcatcagaaggcttggcggcgtaatcccccaatctactaaatttaagtgatttcaaaagagggcaagatcggccaaggactgcaatagatacctcagtt 100  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16053102 atcatcagaaggcttggcggcataaacccccaatctactaattttaagtgatttcaaaagagggcaagatcggccaaggactgcaatagatacctcagtt 16053201  T
Q  101 agactggtatctgaaatgttaagcttttctaacagcggaagcttcctcgcaacttcaataaatccttcatccgaaatttcatagcaatctacaaaccgca 200  Q
    || ||| |||||||||||  |||||| ||||||||||||||||||||| || ||||| |||||||||| || ||||||||||||||||||||||||||||    
T  16053202 agcctgttatctgaaatgacaagcttctctaacagcggaagcttcctcacagcttcactaaatccttcttctgaaatttcatagcaatctacaaaccgca 16053301  T
Q  201 tggaacgtaggtgactgccactgtaaaattcaaattaccaaactatc 247  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  16053302 tggaacgtaggtgactgccactgtaaaatttaaattaccaaactatc 16053348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 42563729 - 42563836
Alignment:
Q  112 tgaaatgttaagcttttctaacagcggaagcttcctcgcaacttcaata---aatccttcatccgaaatttcatagcaatctacaaaccgcatggaacgt 208  Q
    |||||||| |||||| |||||   | ||||||| |||||| ||||| ||   ||||||||||||| ||||   | ||||| ||||||||||||| |||||    
T  42563729 tgaaatgtcaagcttgtctaatttccgaagctttctcgcagcttcactagaaaatccttcatccgtaattgattcgcaatttacaaaccgcatgcaacgt 42563828  T
Q  209 aggtgact 216  Q
    ||||||||    
T  42563829 aggtgact 42563836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 8e-32; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 513 - 647
Target Start/End: Original strand, 36309760 - 36309893
Alignment:
Q  513 agagcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggata 612  Q
    |||||||||||| |||||||| |||||||||||||||||  | || || |||| ||||||||| |||| ||||||||| ||||||||||| ||||||||     
T  36309760 agagcgccacattagaggatccttgcaaatgttccaccattgcggacacactc-gcatgcactcgtcacaatttcaaacgcaccaagcctatgaaggatg 36309858  T
Q  613 tttgatgtcaaatctctaggaagatcaagccaatt 647  Q
    |||| |||||||||| |||||||||||||||||||    
T  36309859 tttgctgtcaaatctataggaagatcaagccaatt 36309893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 519 - 655
Target Start/End: Original strand, 36321276 - 36321412
Alignment:
Q  519 ccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatatttgat 618  Q
    ||||||||| ||||| |||||||||||| ||||  | ||||| |||| ||| ||||| |||| ||||||||| | |||||||||||||||||| |||  |    
T  36321276 ccacatgagtggatccttgcaaatgttcaaccattgtgggcatactcggcaagcactcgtcacaatttcaaacgtaccaagcctctgaaggatgttttct 36321375  T
Q  619 gtcaaatctctaggaagatcaagccaatttggtcctg 655  Q
    |||||||| || |||||||||||||||||||||||||    
T  36321376 gtcaaatcacttggaagatcaagccaatttggtcctg 36321412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 36325811 - 36326001
Alignment:
Q  40 aaatttaagtgatttcaaaagagggcaagatcggccaaggactgcaatagatacctcagttagactggtatctgaaatgttaagcttttctaacagcgga 139  Q
    ||||||||| ||||||||||||||||||||||| |||||| || ||| ||| ||||||||||||   | || |||||||| || ||| ||||||||||||    
T  36325811 aaatttaagcgatttcaaaagagggcaagatcgaccaagggcttcaagagagacctcagttagataagaatgtgaaatgtcaaccttctctaacagcgga 36325910  T
Q  140 agcttcctcgcaacttcaataaatccttcatccgaaatttcatagcaatctacaaaccgcatggaacgtaggtgactgccactgtaaaatt 230  Q
    ||||| |||    ||||| ||||||||| ||  |  ||  |  | |||| ||||| ||||||| || ||||||||||||||||||||||||    
T  36325911 agctttctcaaggcttcactaaatcctttatttgtcatcccccaacaatttacaagccgcatgcaaagtaggtgactgccactgtaaaatt 36326001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 517 - 650
Target Start/End: Original strand, 36328106 - 36328239
Alignment:
Q  517 cgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatatttg 616  Q
    |||||||||| |||||| ||||||| |||||||||  | ||| | |||| |||||||||  ||| ||||||||| | |||||||||||||||||| ||||    
T  36328106 cgccacatgacaggatccttgcaaacgttccaccattgcggggacactcggcatgcactcctcagaatttcaaacgtaccaagcctctgaaggatgtttg 36328205  T
Q  617 atgtcaaatctctaggaagatcaagccaatttgg 650  Q
     |||||||||  | |||||||||| |||||||||    
T  36328206 ctgtcaaatcaatcggaagatcaaaccaatttgg 36328239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 626
Target Start/End: Original strand, 36333929 - 36334054
Alignment:
Q  501 gcacatgcagatagagcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagc 600  Q
    ||||||||  |||| |||||||||||||||||| |||||||||||||||||  | || || |||| ||| ||||| |||| |||||| || | |||||||    
T  36333929 gcacatgcgaatagtgcgccacatgagaggatccttgcaaatgttccaccattgtggacacactcggcaagcactcgtcacaatttccaacgtaccaagc 36334028  T
Q  601 ctctgaaggatatttgatgtcaaatc 626  Q
    ||||||||||| |||| |||||||||    
T  36334029 ctctgaaggatgtttgctgtcaaatc 36334054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 501 - 652
Target Start/End: Original strand, 36313852 - 36314000
Alignment:
Q  501 gcacatgcagatagagcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagc 600  Q
    ||||||||  |||| |||||||||||||||||| |||||||| ||| ||||  ||| ||| || |  |||||||| |||| ||||||||    |||||||    
T  36313852 gcacatgcgaatagtgcgccacatgagaggatccttgcaaatcttcaaccattgagtgcatacacaacatgcactcgtcacaatttcaat---accaagc 36313948  T
Q  601 ctctgaaggatatttgatgtcaaatctctaggaagatcaagccaatttggtc 652  Q
    |||||||| || |||  ||||||||| || ||||||||||||||||||||||    
T  36313949 ctctgaagaatgttttctgtcaaatcacttggaagatcaagccaatttggtc 36314000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 650
Target Start/End: Complemental strand, 30227426 - 30227292
Alignment:
Q  516 gcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatattt 615  Q
    |||||||||||||||||| ||||||||||||||| | ||||| || |||   ||||||||||||| ||| || |  | ||||||||| ||||| || |||    
T  30227426 gcgccacatgagaggatccttgcaaatgttccactatagaggacacacttgacatgcacttgtcacaatctcgatggtaccaagcctttgaagaatgttt 30227327  T
Q  616 gatgtcaaatctctaggaagatcaagccaatttgg 650  Q
    | ||| |  ||||||||||| ||||||||||||||    
T  30227326 gttgtgatgtctctaggaagttcaagccaatttgg 30227292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 650
Target Start/End: Complemental strand, 30201249 - 30201117
Alignment:
Q  518 gccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatatttga 617  Q
    |||||||||||||||| ||||||||||||||||| ||||| || |||   ||||||||||||| ||||||||  | || |||||| ||||| || |||      
T  30201249 gccacatgagaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgtcacaatttcaatggtactaagcctttgaagaatgttttc 30201150  T
Q  618 tgtcaaatctctaggaagatcaagccaatttgg 650  Q
    ||| |  ||| ||||||| ||||||||||||||    
T  30201149 tgtaatgtctttaggaagttcaagccaatttgg 30201117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 429
Target Start/End: Original strand, 36309620 - 36309698
Alignment:
Q  351 atcattgccgaatccctcaatatcgatgtcttccaactgattgcagcttcgttcaatagcattgcaacaaatcttcacc 429  Q
    ||||||||| |||  ||||||||||||||||||||| |||| ||| |||| ||||| ||| ||||||||||||||||||    
T  36309620 atcattgccaaatgtctcaatatcgatgtcttccaaatgatcgcaacttctttcaacagctttgcaacaaatcttcacc 36309698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 650
Target Start/End: Complemental strand, 30223175 - 30223041
Alignment:
Q  516 gcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatattt 615  Q
    |||||||||||||||||| ||||||||||||||||||  ||| || ||   || |||  |  ||| |||||||| || ||||||||| || || || |||    
T  30223175 gcgccacatgagaggatccttgcaaatgttccaccaataaggacacacattgcgtgccttcttcagaatttcaactggaccaagcctttggagaatgttt 30223076  T
Q  616 gatgtcaaatctctaggaagatcaagccaatttgg 650  Q
    ||||| |  ||||||||||| ||||||||||||||    
T  30223075 gatgtgatgtctctaggaagctcaagccaatttgg 30223041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 650
Target Start/End: Complemental strand, 30230416 - 30230282
Alignment:
Q  516 gcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatattt 615  Q
    |||||||||| ||||||| ||||||||| ||||||||  ||| || ||   || |||| ||||||||||||| |   |||||||||| || || || |||    
T  30230416 gcgccacatgcgaggatccttgcaaatgctccaccaataaggacacacattgcgtgcatttgtcaaaatttcgaccacaccaagcctttggagaatgttt 30230317  T
Q  616 gatgtcaaatctctaggaagatcaagccaatttgg 650  Q
    ||||| |  ||||||||||| ||||||||||||||    
T  30230316 gatgtaatgtctctaggaagctcaagccaatttgg 30230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 36313433 - 36313623
Alignment:
Q  40 aaatttaagtgatttcaaaagagggcaagatcggccaaggactgcaatagatacctcagttagactggtatctgaaatgttaagcttttctaacagcgga 139  Q
    ||||||||| ||||||||||||||||| ||||| |||||| || ||| ||| || ||||||||   |  || ||||||   || ||| || ||| |||||    
T  36313433 aaatttaagcgatttcaaaagagggcatgatcgaccaagggcttcaagagagacatcagttaggtagtgatgtgaaattacaaccttctccaaccgcgga 36313532  T
Q  140 agcttcctcgcaacttcaataaatccttcatccgaaatttcatagcaatctacaaaccgcatggaacgtaggtgactgccactgtaaaatt 230  Q
    ||||| ||| || ||||| ||||||||||||| | |||     |||||||||||| || ||||  || |||||| ||||||||||||||||    
T  36313533 agctttctcacagcttcactaaatccttcatctgtaatcctcgagcaatctacaagccccatgcgacataggtgtctgccactgtaaaatt 36313623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 589
Target Start/End: Complemental strand, 29751926 - 29751856
Alignment:
Q  519 ccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaa 589  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||    | ||||||||||| ||||||||    
T  29751926 ccacatgagaggatccttgcaaacgttccaccaaagaggacaaacattacgtgcacttgtcacaatttcaa 29751856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 650
Target Start/End: Complemental strand, 29856923 - 29856790
Alignment:
Q  517 cgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatatttg 616  Q
    ||||||| ||||||||| || || |||| |||||| ||||| ||||||   ||||||||| |||  ||||||| || | ||||||| |||||||| ||||    
T  29856923 cgccacaggagaggatctttacatatgtcccaccatagaggacaaacttgacatgcacttttcacgatttcaattgtatcaagcctttgaaggatgtttg 29856824  T
Q  617 atgtcaaatctctaggaagatcaagccaatttgg 650  Q
     ||| |  |||||  |||| ||||||||||||||    
T  29856823 ctgtgatttctctcagaagttcaagccaatttgg 29856790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 36309477 - 36309526
Alignment:
Q  181 atagcaatctacaaaccgcatggaacgtaggtgactgccactgtaaaatt 230  Q
    |||||||||||| |||||||||||| | ||||||||||||||| ||||||    
T  36309477 atagcaatctaccaaccgcatggaatgcaggtgactgccactgcaaaatt 36309526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 575
Target Start/End: Complemental strand, 30239112 - 30239053
Alignment:
Q  516 gcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcact 575  Q
    |||||||||||||||||| ||||| ||||||||||| ||||| || |||  |||||||||    
T  30239112 gcgccacatgagaggatccttgcatatgttccaccatagaggacatactaggcatgcact 30239053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 29649520 - 29649466
Alignment:
Q  113 gaaatgttaagcttttctaacagcggaagcttcctcgcaacttcaataaatcctt 167  Q
    ||||||||| ||||||| |||| ||||| |||  |||||||||||||||||||||    
T  29649520 gaaatgttatgcttttccaacaacggaaactttttcgcaacttcaataaatcctt 29649466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 36327788 - 36327865
Alignment:
Q  153 cttcaataaatccttcatccgaaatttcatagcaatctacaaaccgcatggaacgtaggtgactgccactgtaaaatt 230  Q
    ||||| ||||||||||||| | ||| |   |||||| ||||| || |||| || ||||||||||||||||||||||||    
T  36327788 cttcagtaaatccttcatctgtaatcttcgagcaatttacaagccccatgcaaagtaggtgactgccactgtaaaatt 36327865  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 517 - 589
Target Start/End: Complemental strand, 29649111 - 29649039
Alignment:
Q  517 cgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaa 589  Q
    ||||||||||||||||| || |||||||||||| | ||||| || |||  ||||||| |||| | ||||||||    
T  29649111 cgccacatgagaggatccttacaaatgttccacgatagaggacatactaggcatgcatttgttacaatttcaa 29649039  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 36320984 - 36321024
Alignment:
Q  190 tacaaaccgcatggaacgtaggtgactgccactgtaaaatt 230  Q
    ||||| || |||| |||||||||||||||||||||||||||    
T  36320984 tacaagccacatgcaacgtaggtgactgccactgtaaaatt 36321024  T

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Target: chr7 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 650
Target Start/End: Original strand, 16644743 - 16644877
Alignment:
Q  516 gcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatattt 615  Q
    ||||||||||||||| || ||||||||||||||||| ||||  || |||  | |||||||||||| |||||||| ||||  |||||| ||||| || |||    
T  16644743 gcgccacatgagaggttccttgcaaatgttccaccatagagcacacactagggatgcacttgtcacaatttcaactgcattaagcctttgaagaatgttt 16644842  T
Q  616 gatgtcaaatctctaggaagatcaagccaatttgg 650  Q
      ||| | |||||||||||| ||||||||||||||    
T  16644843 tgtgtgatatctctaggaaggtcaagccaatttgg 16644877  T

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Target: chr7; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 650
Target Start/End: Original strand, 17619104 - 17619238
Alignment:
Q  516 gcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatattt 615  Q
    ||||||||||||||| || ||||||||||||||||| ||||  || |||  | |||||||||||| |||||||| ||||  |||||| ||||| || |||    
T  17619104 gcgccacatgagaggttccttgcaaatgttccaccatagagcacacactagggatgcacttgtcacaatttcaactgcattaagcctttgaagaatgttt 17619203  T
Q  616 gatgtcaaatctctaggaagatcaagccaatttgg 650  Q
      ||| | |||||||||||| ||||||||||||||    
T  17619204 tgtgtgatatctctaggaaggtcaagccaatttgg 17619238  T

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Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 650
Target Start/End: Original strand, 14934506 - 14934638
Alignment:
Q  518 gccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaaggatatttga 617  Q
    |||||||| ||||||| ||| |||| ||||||||||||||||| |||   |||||||| | ||| |||||||  ||||||||||| || || || ||||     
T  14934506 gccacatgtgaggatccttgaaaatattccaccaaagagggcacacttgacatgcactagccaatatttcaatggcaccaagcctttggagaatgtttgc 14934605  T
Q  618 tgtcaaatctctaggaagatcaagccaatttgg 650  Q
     |||| |||||| ||||| ||||||||||||||    
T  14934606 agtcacatctcttggaagttcaagccaatttgg 14934638  T

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Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 511 - 650
Target Start/End: Original strand, 16955662 - 16955801
Alignment:
Q  511 atagagcgccacatgagaggatcattgcaaatgttccaccaaagagggcaaactccgcatgcacttgtcaaaatttcaaatgcaccaagcctctgaagga 610  Q
    |||| |||||||||||||||||| |||||||| |||||||| | |||||| |||   ||| ||||||| | ||||||||  | | |||||||||| || |    
T  16955662 atagtgcgccacatgagaggatccttgcaaatattccaccataaagggcacacttgacatacacttgtgacaatttcaatagtatcaagcctctggagaa 16955761  T
Q  611 tatttgatgtcaaatctctaggaagatcaagccaatttgg 650  Q
    | |||  || ||||||| | || || ||||||||||||||    
T  16955762 tgtttattgccaaatcttttggtagttcaagccaatttgg 16955801  T

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