View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14603_high_2 (Length: 613)
Name: NF14603_high_2
Description: NF14603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14603_high_2 |
 |  |
|
| [»] scaffold0084 (1 HSPs) |
 |  |  |
|
| [»] scaffold0422 (1 HSPs) |
 |  |  |
|
| [»] scaffold1271 (2 HSPs) |
 |  |  |
|
| [»] scaffold0503 (2 HSPs) |
 |  |  |
|
| [»] scaffold0458 (1 HSPs) |
 |  |  |
|
| [»] scaffold0014 (1 HSPs) |
 |  |  |
|
| [»] scaffold1575 (1 HSPs) |
 |  |  |
|
| [»] scaffold0068 (2 HSPs) |
 |  |  |
|
| [»] scaffold0064 (1 HSPs) |
 |  |  |
|
| [»] scaffold1761 (1 HSPs) |
 |  |  |
|
| [»] scaffold0721 (1 HSPs) |
 |  |  |
|
| [»] scaffold0431 (1 HSPs) |
 |  |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
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| [»] scaffold0473 (1 HSPs) |
 |  |  |
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| [»] scaffold0016 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0084 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 20 - 342
Target Start/End: Complemental strand, 36318 - 35993
Alignment:
| Q |
20 |
gaaccacataatcggattcatacaccaacagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacacc |
119 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| || |
|
|
| T |
36318 |
gaaccactgaatcggattcatacaccaacagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggcaacaaccggagctcactcc |
36219 |
T |
 |
| Q |
120 |
accgcaaacaaaaccgccgcaaatcaaccaatcgtgagcggacccaaagacaacgcaaaaggtag--tcttttttctaattccttagatctaggtttcaa |
217 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
36218 |
accgcaaacaaaaccgccgcaaatcaaccgatcgtgagcggacccaaagacaacgcaaaaggtagtctctttttattaattctttagatctaggtttcaa |
36119 |
T |
 |
| Q |
218 |
tttaactgttttggaaattttgaggtcagaatcgagaagagggtgaaattttaggttagaaa-ccataaaagggagactcttttgtctccggcgcggcgg |
316 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
36118 |
tttaactgttgtggaaatttcgaggtcagaatcgagaagagggtgaaattttaggttaaaaatccataaaggggagactcttttgtctccggcgcggcgg |
36019 |
T |
 |
| Q |
317 |
cgcagccgcgatggctcgccgtccac |
342 |
Q |
| |
|
||||| ||||||||||||||| |||| |
|
|
| T |
36018 |
cgcagtcgcgatggctcgccggccac |
35993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 147; Significance: 3e-77; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 48 - 376
Target Start/End: Original strand, 16360909 - 16361220
Alignment:
| Q |
48 |
cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacaccaccgcaaacaaaaccgccgcaaatcaac |
147 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || |||||||| |||| ||||||||||||||||||||| |
|
|
| T |
16360909 |
cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggcagcgaccgaagttcacaccatcgcagacaaaaccgccgcaaatcaac |
16361008 |
T |
 |
| Q |
148 |
caatcgtgagcggacccaaagacaacgcaaaaggtagtcttttttctaattccttagatctaggtttcaatttaactgttttggaaattttgaggtcaga |
247 |
Q |
| |
|
| ||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
16361009 |
cg------------cccaa-------gcaaaaggtagtctctttcctaatttcttagatctaggtttcaatttaactgttgtggaatttttgaggtcaga |
16361089 |
T |
 |
| Q |
248 |
atcgagaagagggtgaaattttaggttagaaacc---ataaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactg |
344 |
Q |
| |
|
| |||||||||||||||||| ||| |||||| | | |||| |||||| ||||||||||||||||||||||||||||||||||||||| || |||| | |
|
|
| T |
16361090 |
tttgagaagagggtgaaattt-agggtagaaatccaaaaaaaaaggagacccttttgtctccggcgcggcggcgcagccgcgatggctcgtcggccaccg |
16361188 |
T |
 |
| Q |
345 |
cgcaggaactccttccaccacccattctccaa |
376 |
Q |
| |
|
||| |||||||| ||||||||||||||||||| |
|
|
| T |
16361189 |
cgccggaactccctccaccacccattctccaa |
16361220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 466 - 601
Target Start/End: Original strand, 25985612 - 25985744
Alignment:
| Q |
466 |
ggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagccc |
565 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||| || |
|
|
| T |
25985612 |
ggtcttacaccctatatatat--ccccttcgaaccggttcggttctctggaaccgacccagggtttgaaccgaaccggccccagcctgtcctctaagtcc |
25985709 |
T |
 |
| Q |
566 |
atttccgaatttgttcttcggcccaactctctgctg |
601 |
Q |
| |
|
| ||||||| ||||||||||| |||||||||||||| |
|
|
| T |
25985710 |
aattccgaaattgttcttcgg-ccaactctctgctg |
25985744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 497 - 601
Target Start/End: Complemental strand, 15566875 - 15566771
Alignment:
| Q |
497 |
aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc |
596 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||| | ||| ||||||| |||||||||||||||||||| |
|
|
| T |
15566875 |
aaccggttcggttctctggaaccgacccaggacttgaaccgaaccggccccagtctgtcctctaggtccaattccgaaactgttcttcggcccaactctc |
15566776 |
T |
 |
| Q |
597 |
tgctg |
601 |
Q |
| |
|
||||| |
|
|
| T |
15566775 |
tgctg |
15566771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 497 - 601
Target Start/End: Complemental strand, 15579520 - 15579417
Alignment:
| Q |
497 |
aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc |
596 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| |||||||||||||| ||||| ||||| |||| | ||| ||||||| |||||||||||||||||||| |
|
|
| T |
15579520 |
aaccagttcggttctctggaaccgacccaggacttgaaccgaaccgg-cccagtctgtcctctaggtccaattccgaaactgttcttcggcccaactctc |
15579422 |
T |
 |
| Q |
597 |
tgctg |
601 |
Q |
| |
|
||||| |
|
|
| T |
15579421 |
tgctg |
15579417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 20841779 - 20841730
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
20841779 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
20841730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 22704466 - 22704515
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
22704466 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
22704515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 22713437 - 22713486
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
22713437 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
22713486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 39535167 - 39535216
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
39535167 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
39535216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 18036774 - 18036816
Alignment:
| Q |
305 |
ccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
18036774 |
ccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
18036816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 36696551 - 36696501
Alignment:
| Q |
302 |
tctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||| |||| |||| |||| |
|
|
| T |
36696551 |
tctccggcgcggcggcgcaaccgcgatggctcaccgaccaccgcgccggaa |
36696501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 130; Significance: 5e-67; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 20 - 376
Target Start/End: Original strand, 27510130 - 27510467
Alignment:
| Q |
20 |
gaaccacataatcggattcatacaccaacagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacacc |
119 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||| |||| |||| | |||||||||||||||||| ||||||||||||| ||||||| ||||||| |
|
|
| T |
27510130 |
gaaccactgaatcgggttcatacaccaacagaagcaaacggacgtgtcggaaccgagtcggaacgtaccgaagcacaaggtagcgaccggagttcacacc |
27510229 |
T |
 |
| Q |
120 |
accgcaaacaaaaccgccgcaaatcaaccaatcgtgagcggacccaaagacaacgcaaaaggtagtcttttttctaattccttagatctaggtttcaatt |
219 |
Q |
| |
|
|||||| ||||||||| |||||||||||| | | |||| ||||||||||||| |||||||| | ||||||||||| |||||||| |
|
|
| T |
27510230 |
accgcagacaaaaccgtcgcaaatcaacc-----------gccgcaaa-------caaaaggtagtctcttttctaacttcttagatctag-tttcaatt |
27510310 |
T |
 |
| Q |
220 |
taactgttttggaaattttgaggtcagaatcgagaagagggtgaaattttaggttagaaa-ccataaaagggagactcttttgtctccggcgcggcggcg |
318 |
Q |
| |
|
|| ||||| ||||| ||||||||| ||| | |||||||||||||||||| |||||||||| ||| |||| |||| ||||||||||| ||||||||||| |
|
|
| T |
27510311 |
tagctgttgtggaatttttgaggtaagatttgagaagagggtgaaattt-aggttagaaatccaaaaaaaaaagacccttttgtctccagcgcggcggcg |
27510409 |
T |
 |
| Q |
319 |
cagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaa |
376 |
Q |
| |
|
|||||||| ||||||| || |||| |||| |||||||| ||||||||||||||||||| |
|
|
| T |
27510410 |
cagccgcgttggctcgtcggccaccgcgccggaactccctccaccacccattctccaa |
27510467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 20 - 376
Target Start/End: Original strand, 27518073 - 27518410
Alignment:
| Q |
20 |
gaaccacataatcggattcatacaccaacagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacacc |
119 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||| |||| |||| | |||||||||||||||||| ||||||||||||| ||||||| ||||||| |
|
|
| T |
27518073 |
gaaccactgaatcgggttcatacaccaacagaagcaaacggacgtgtcggaaccgagtcggaacgtaccgaagcacaaggtagcgaccggagttcacacc |
27518172 |
T |
 |
| Q |
120 |
accgcaaacaaaaccgccgcaaatcaaccaatcgtgagcggacccaaagacaacgcaaaaggtagtcttttttctaattccttagatctaggtttcaatt |
219 |
Q |
| |
|
|||||| ||||||||| |||||||||||| | | |||| ||||||||||||| |||||||| | ||||||||||| |||||||| |
|
|
| T |
27518173 |
accgcagacaaaaccgtcgcaaatcaacc-----------gccgcaaa-------caaaaggtagtctcttttctaacttcttagatctag-tttcaatt |
27518253 |
T |
 |
| Q |
220 |
taactgttttggaaattttgaggtcagaatcgagaagagggtgaaattttaggttagaaa-ccataaaagggagactcttttgtctccggcgcggcggcg |
318 |
Q |
| |
|
|| ||||| ||||| ||||||||| ||| | |||||||||||||||||| |||||||||| ||| |||| |||| ||||||||||| ||||||||||| |
|
|
| T |
27518254 |
tagctgttgtggaatttttgaggtaagatttgagaagagggtgaaattt-aggttagaaatccaaaaaaaaaagacccttttgtctccagcgcggcggcg |
27518352 |
T |
 |
| Q |
319 |
cagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaa |
376 |
Q |
| |
|
|||||||| ||||||| || |||| |||| |||||||| ||||||||||||||||||| |
|
|
| T |
27518353 |
cagccgcgttggctcgtcggccaccgcgccggaactccctccaccacccattctccaa |
27518410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 497 - 601
Target Start/End: Complemental strand, 15665291 - 15665187
Alignment:
| Q |
497 |
aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc |
596 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| | ||| ||| ||| ||||||||||||||||||| |
|
|
| T |
15665291 |
aaccggttcggttctttggaaccgacccaggacttgaaccgaaccggccccagcctgtcctctaggtccaattctgaaactgttcttcggcccaactctt |
15665192 |
T |
 |
| Q |
597 |
tgctg |
601 |
Q |
| |
|
||||| |
|
|
| T |
15665191 |
tgctg |
15665187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 16816017 - 16815963
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
16816017 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct |
16815963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 16824772 - 16824718
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
16824772 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct |
16824718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 8276471 - 8276520
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
8276471 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
8276520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 24142708 - 24142659
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
24142708 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
24142659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 24149198 - 24149149
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
24149198 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
24149149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 30436373 - 30436324
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
30436373 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
30436324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 615008 - 614964
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
615008 |
ctccggcgcggcggcgcagccgcgatggctcgccgaccaccgcgc |
614964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 622929 - 622885
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
622929 |
ctccggcgcggcggcgcagccgcgatggctcgccgaccaccgcgc |
622885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 9130879 - 9130835
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
9130879 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
9130835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 9144712 - 9144668
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
9144712 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
9144668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 20050167 - 20050127
Alignment:
| Q |
297 |
ttttgtctccggcgcggcggcgcagccgcgatggctcgccg |
337 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20050167 |
ttttgtctccgacgcggcggcgcagccgcgatggctcgccg |
20050127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 20058028 - 20057988
Alignment:
| Q |
297 |
ttttgtctccggcgcggcggcgcagccgcgatggctcgccg |
337 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20058028 |
ttttgtctccgacgcggcggcgcagccgcgatggctcgccg |
20057988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 115; Significance: 4e-58; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 461 - 603
Target Start/End: Original strand, 13186798 - 13186940
Alignment:
| Q |
461 |
aaaaaggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtcta |
560 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13186798 |
aaaagggtcttacaccctatatatatgtcccctccgaaccggttcggatctctgaaaccgacccaggatttgaaccgaaccggccccagcctgtcctcta |
13186897 |
T |
 |
| Q |
561 |
agcccatttccgaatttgttcttcggcccaactctctgctgct |
603 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
13186898 |
agcccaattccgaatttgttcttcggcccaactctctgctgct |
13186940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 497 - 601
Target Start/End: Original strand, 39455420 - 39455524
Alignment:
| Q |
497 |
aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc |
596 |
Q |
| |
|
||||||||||||||| |||||| |||||||| ||||||| ||||||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
39455420 |
aaccggttcggttctctggaactgacccagggtttgaactgaaccggccccagcctgtcctctaagtccaattccgaaattgttcttcggcccaactctc |
39455519 |
T |
 |
| Q |
597 |
tgctg |
601 |
Q |
| |
|
||||| |
|
|
| T |
39455520 |
tgctg |
39455524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 20520591 - 20520509
Alignment:
| Q |
48 |
cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacaccaccgcaaacaa |
130 |
Q |
| |
|
||||||||||| ||||||||||| |||| |||||||||||||||||| || | ||||||| || ||| ||||| |||||||| |
|
|
| T |
20520591 |
cagaagcaaacggacgcgtcgaatccgaatcggaacgtaccggagcataaagcagcaaccaaagttcataccacggcaaacaa |
20520509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 5637447 - 5637403
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
5637447 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
5637403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 25925756 - 25925703
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcc |
356 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| |||| |||| |||||||| |
|
|
| T |
25925756 |
ctccggcgcggcggagcagccgcgattgctcgccggccaccgcgccggaactcc |
25925703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 5623308 - 5623264
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||| |||| |
|
|
| T |
5623308 |
ctccggcgcggcggcgcagccgcgatggttcgccggccaccgcgc |
5623264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0422 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0422
Description:
Target: scaffold0422; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 466 - 603
Target Start/End: Complemental strand, 5521 - 5384
Alignment:
| Q |
466 |
ggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagccc |
565 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||| |||||| || |
|
|
| T |
5521 |
ggtcttacaccctatatatatgtccccttcgaaccggttcggtactctggaaccgacccaggacttgaaccgaactggccccagcctgtcctctaagtcc |
5422 |
T |
 |
| Q |
566 |
atttccgaatttgttcttcggcccaactctctgctgct |
603 |
Q |
| |
|
| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5421 |
aattccgaaattgttcttcggcccaactctctgctgct |
5384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1271 (Bit Score: 91; Significance: 9e-44; HSPs: 2)
Name: scaffold1271
Description:
Target: scaffold1271; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 461 - 603
Target Start/End: Complemental strand, 885 - 743
Alignment:
| Q |
461 |
aaaaaggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtcta |
560 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||| || |||| |
|
|
| T |
885 |
aaaagggtcttacaccctatatatatgtccccttcgaaccggttcggttctctggaaccgacccagaatttgaaccgaaccgaccccagcctttcctcta |
786 |
T |
 |
| Q |
561 |
agcccatttccgaatttgttcttcggcccaactctctgctgct |
603 |
Q |
| |
|
|||||| ||||||||| |||||||| || |||||| ||||| |
|
|
| T |
785 |
agcccaacaccgaatttgctcttcggctcagctctctactgct |
743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1271; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 1327 - 1245
Alignment:
| Q |
48 |
cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacaccaccgcaaacaa |
130 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||||||||| | |||||||| || ||||||||| |||||||| |
|
|
| T |
1327 |
cagaagcaaaaggacgcgtcgaatccgagtcggaacgtaccggagcacaaagcagcaaccgaagttcacaccacggcaaacaa |
1245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0503 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0503
Description:
Target: scaffold0503; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 466 - 598
Target Start/End: Complemental strand, 920 - 790
Alignment:
| Q |
466 |
ggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagccc |
565 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||||||| ||||| || |
|
|
| T |
920 |
ggtcttacaccctatatatat--cccctacgaaccggttcggttctctggaaccgacctaggacttgaaccgaaccggccctagcctgtcctctaactcc |
823 |
T |
 |
| Q |
566 |
atttccgaatttgttcttcggcccaactctctg |
598 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||| |
|
|
| T |
822 |
aattccgaaattgttcttcggcccaactctctg |
790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0503; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 466 - 598
Target Start/End: Complemental strand, 5487 - 5357
Alignment:
| Q |
466 |
ggtcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagccc |
565 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||||||| ||||| || |
|
|
| T |
5487 |
ggtcttacaccctatatatat--cccctacgaaccggttcggttctctggaaccgacctaggacttgaaccgaaccggccctagcctgtcctctaactcc |
5390 |
T |
 |
| Q |
566 |
atttccgaatttgttcttcggcccaactctctg |
598 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||| |
|
|
| T |
5389 |
aattccgaaattgttcttcggcccaactctctg |
5357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0458 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0458
Description:
Target: scaffold0458; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 497 - 601
Target Start/End: Complemental strand, 8297 - 8193
Alignment:
| Q |
497 |
aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc |
596 |
Q |
| |
|
||||||||||||||| |||||| |||||||| ||||||| ||||||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
8297 |
aaccggttcggttctctggaactgacccagggtttgaactgaaccggccccagcctgtcctctaagtccaattccgaaattgttcttcggcccaactctc |
8198 |
T |
 |
| Q |
597 |
tgctg |
601 |
Q |
| |
|
||||| |
|
|
| T |
8197 |
tgctg |
8193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 462 - 601
Target Start/End: Complemental strand, 4892495 - 4892355
Alignment:
| Q |
462 |
aaaaggtcttacaccctatatatatgtccccttcgaaccggttcggttcta-tggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtcta |
560 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||| |||| | | ||||||||| |||| ||||||| | | ||||||| |||||| |||| |
|
|
| T |
4892495 |
aaaaagtcttacaccctatatatatgtcccctttgaaccggtttggttttcctagaaccgaccaaggacttgaaccaatctggccccaacctgtcctcta |
4892396 |
T |
 |
| Q |
561 |
agcccatttccgaatttgttcttcggcccaactctctgctg |
601 |
Q |
| |
|
|| ||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
4892395 |
agtccaattccgaaattgttcttcggcccaactctctgctg |
4892355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 376
Target Start/End: Complemental strand, 4892659 - 4892586
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaa |
376 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||| |
|
|
| T |
4892659 |
ctccggcgcggcggcgaagccgcgatggctcgccggccaccgcgctggaactcactccaccacccattctccaa |
4892586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 4848207 - 4848256
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
4848207 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
4848256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 497 - 601
Target Start/End: Original strand, 4811 - 4915
Alignment:
| Q |
497 |
aaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccccagcctgtcgtctaagcccatttccgaatttgttcttcggcccaactctc |
596 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| | ||| ||| ||| ||||||||||||||||||| |
|
|
| T |
4811 |
aaccggttcggttctttggaaccgacccaggacttgaaccgaaccggccccagcctgtcctctaggtccaattctgaaactgttcttcggcccaactctt |
4910 |
T |
 |
| Q |
597 |
tgctg |
601 |
Q |
| |
|
||||| |
|
|
| T |
4911 |
tgctg |
4915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1575 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold1575
Description:
Target: scaffold1575; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 708 - 835
Alignment:
| Q |
48 |
cagaagcaaacagacgcgtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacaccaccgcaaacaaaaccgccgcaaatcaac |
147 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||| |||| || |||||||| |||||||||||| |
|
|
| T |
708 |
cagaagcaaacggacgcgtcgaatccgagtcggaacggaccggagcacaaggcagcgaccgaagttcacacca---------------ccgcaaatcaac |
792 |
T |
 |
| Q |
148 |
caatcgtgagcggacccaaagacaacgcaaaaggtagtctttt |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
793 |
caatcgtgagcggacccaaagacaacgcaaaaggtagtatttt |
835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 468 - 546
Target Start/End: Original strand, 14253253 - 14253331
Alignment:
| Q |
468 |
tcttacaccctatatatatgtccccttcgaaccggttcggttctatggaaccgacccaggatttgaaccgaaccggccc |
546 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
14253253 |
tcttacaccctatatatatgtcccctccgaactggttcggttctttggaatcgacccatgatttaaaccgaaccggccc |
14253331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 6194991 - 6195040
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
6194991 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
6195040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 6202574 - 6202623
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
6202574 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
6202623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 11629030 - 11628981
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
11629030 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
11628981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 20603139 - 20603090
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
20603139 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
20603090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 37255265 - 37255216
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
37255265 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
37255216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 37265099 - 37265050
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
37265099 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
37265050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 5945134 - 5945090
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
5945134 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
5945090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 5959246 - 5959202
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
5959246 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
5959202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 8616774 - 8616823
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
8616774 |
ctccggcacggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
8616823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 8624644 - 8624693
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
8624644 |
ctccggcacggcggcgcagccgcgatggctcgccggccaccgcgctggaa |
8624693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 16947 - 16893
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
16947 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct |
16893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 24866 - 24812
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
24866 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct |
24812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 8372 - 8318
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
8372 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct |
8318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 21689044 - 21689098
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
21689044 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct |
21689098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 21696963 - 21697017
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactcct |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
21696963 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaactcct |
21697017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 1798448 - 1798497
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
1798448 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
1798497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 1806190 - 1806239
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
1806190 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
1806239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 5434859 - 5434810
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
5434859 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
5434810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 5448679 - 5448630
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
5448679 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
5448630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 15778808 - 15778759
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
15778808 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
15778759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 15793043 - 15792994
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
15793043 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
15792994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 17948940 - 17948989
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
17948940 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
17948989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 17962830 - 17962879
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
17962830 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
17962879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 7787333 - 7787377
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
7787333 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
7787377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 7795183 - 7795227
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
7795183 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
7795227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 11938791 - 11938747
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
11938791 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
11938747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 12386491 - 12386447
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
12386491 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
12386447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 12395184 - 12395140
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
12395184 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
12395140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 34313421 - 34313377
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
34313421 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgc |
34313377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 37576663 - 37576732
Alignment:
| Q |
284 |
aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaac |
353 |
Q |
| |
|
|||| |||||| |||| |||||||||||||||||||||||| ||||||| ||| |||| |||| ||||| |
|
|
| T |
37576663 |
aaaaaggagacgctttcatctccggcgcggcggcgcagccgctatggctcaccggccaccgcgccggaac |
37576732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 37585775 - 37585844
Alignment:
| Q |
284 |
aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaac |
353 |
Q |
| |
|
|||| |||||| |||| |||||||||||||||||||||||| ||||||| ||| |||| |||| ||||| |
|
|
| T |
37585775 |
aaaaaggagacgctttcatctccggcgcggcggcgcagccgctatggctcaccggccaccgcgccggaac |
37585844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 11952715 - 11952671
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
11952715 |
ctccggcgcggcggcgcagccgcgatggcttgccggccaccgcgc |
11952671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1761 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1761
Description:
Target: scaffold1761; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 858 - 803
Alignment:
| Q |
65 |
gtcgaagccgagtcggaacgtaccggagcacaaggtagcaaccggagctcacacca |
120 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
858 |
gtcgaagctgagacggaacgtaccggagcacaaggtagcgaccggagttcacacca |
803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0721 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0721
Description:
Target: scaffold0721; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 2056 - 2007
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
2056 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
2007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0431 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0431
Description:
Target: scaffold0431; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 1836 - 1787
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
1836 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
1787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 18433898 - 18433947
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
18433898 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
18433947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 23267113 - 23267064
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
23267113 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
23267064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 39630627 - 39630578
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
39630627 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
39630578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 39640174 - 39640125
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
39640174 |
ctccggcgcggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
39640125 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 304 - 353
Target Start/End: Original strand, 15830814 - 15830863
Alignment:
| Q |
304 |
tccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaac |
353 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||| |||| ||||| |
|
|
| T |
15830814 |
tccggcgcggcggcgcagccgcgatggctcaccgaccaccgcgccggaac |
15830863 |
T |
 |
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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 12306835 - 12306791
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgc |
347 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
12306835 |
ctccggcgcggcggcgcagccgctatggctcgccggccaccgcgc |
12306791 |
T |
 |
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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 62146 - 62215
Alignment:
| Q |
284 |
aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaac |
353 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||| |||||||| ||| |||| |||| ||||| |
|
|
| T |
62146 |
aaaagggagaaactttcatctccggcgcggcggcgcagccgtgatggctcaccggccaccgcgccggaac |
62215 |
T |
 |
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Target: chr2 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 12375512 - 12375561
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
12375512 |
ctccggcacggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
12375561 |
T |
 |
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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 12389339 - 12389388
Alignment:
| Q |
303 |
ctccggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaa |
352 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| |||| |||| |
|
|
| T |
12389339 |
ctccggcacggcggcgcagccgcgatggctcgccggccaccgcgccggaa |
12389388 |
T |
 |
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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 19656698 - 19656649
Alignment:
| Q |
284 |
aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctc |
333 |
Q |
| |
|
|||| |||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
19656698 |
aaaaaggagacactttcatctccggcgcggcggcgcagccgcgatggctc |
19656649 |
T |
 |
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Target: scaffold0473 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0473
Description:
Target: scaffold0473; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 8227 - 8159
Alignment:
| Q |
307 |
ggcgcggcggcgcagccgcgatggctcgccgtccactgcgcaggaactccttccaccacccattctccaa |
376 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||| || | |||| || ||| ||||||||||||||| |
|
|
| T |
8227 |
ggcgcggcggcgcagccgcgatggctcgacggccaccgcaccggaa-accctccgccacccattctccaa |
8159 |
T |
 |
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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 57868 - 57819
Alignment:
| Q |
284 |
aaaagggagactcttttgtctccggcgcggcggcgcagccgcgatggctc |
333 |
Q |
| |
|
||||| ||||| |||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
57868 |
aaaagagagacactttcatctccggcgcggcggcgcagccgcaatggctc |
57819 |
T |
 |
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