View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14603_low_9 (Length: 263)

Name: NF14603_low_9
Description: NF14603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14603_low_9
NF14603_low_9
[»] chr2 (28 HSPs)
chr2 (1-74)||(40450752-40450825)
chr2 (71-150)||(44091840-44091919)
chr2 (74-150)||(29065778-29065854)
chr2 (72-150)||(33352-33430)
chr2 (72-150)||(2942257-2942335)
chr2 (73-150)||(11361050-11361127)
chr2 (72-148)||(28292026-28292101)
chr2 (69-150)||(4076717-4076799)
chr2 (73-150)||(1066343-1066420)
chr2 (74-150)||(1060961-1061037)
chr2 (76-147)||(27728814-27728884)
chr2 (74-147)||(36593656-36593729)
chr2 (74-150)||(30197324-30197400)
chr2 (1-61)||(40276435-40276494)
chr2 (3-71)||(44109530-44109597)
chr2 (74-147)||(21604071-21604145)
chr2 (74-124)||(35244777-35244827)
chr2 (71-147)||(28926759-28926836)
chr2 (74-150)||(20964134-20964210)
chr2 (73-147)||(42552464-42552539)
chr2 (217-247)||(2942403-2942433)
chr2 (74-124)||(24427616-24427666)
chr2 (74-124)||(27036553-27036603)
chr2 (217-247)||(29065922-29065952)
chr2 (74-142)||(8890686-8890755)
chr2 (74-142)||(19655127-19655196)
chr2 (73-150)||(40584782-40584862)
chr2 (74-150)||(21121332-21121407)
[»] chr5 (23 HSPs)
chr5 (71-150)||(41879501-41879580)
chr5 (73-150)||(20346439-20346516)
chr5 (74-150)||(20339846-20339922)
chr5 (74-150)||(18895777-18895853)
chr5 (74-148)||(19801108-19801182)
chr5 (73-150)||(40011754-40011831)
chr5 (74-150)||(5583059-5583136)
chr5 (73-150)||(15460721-15460798)
chr5 (74-147)||(11994395-11994468)
chr5 (74-147)||(43028292-43028364)
chr5 (71-124)||(22500243-22500296)
chr5 (73-150)||(37540797-37540874)
chr5 (73-150)||(30780318-30780397)
chr5 (74-150)||(37548341-37548417)
chr5 (74-129)||(5453746-5453801)
chr5 (73-124)||(22506823-22506874)
chr5 (67-149)||(25845588-25845670)
chr5 (73-150)||(25852229-25852306)
chr5 (73-148)||(5342461-5342537)
chr5 (71-147)||(22249010-22249086)
chr5 (73-147)||(14615727-14615801)
chr5 (217-247)||(41879403-41879433)
chr5 (73-142)||(246-318)
[»] scaffold0154 (1 HSPs)
scaffold0154 (73-150)||(19193-19270)
[»] chr3 (21 HSPs)
chr3 (74-150)||(54518740-54518816)
chr3 (73-148)||(9772684-9772759)
chr3 (73-150)||(10767038-10767116)
chr3 (71-150)||(54833976-54834054)
chr3 (74-148)||(48775405-48775481)
chr3 (74-150)||(45610949-45611025)
chr3 (72-147)||(23866577-23866651)
chr3 (74-147)||(21152252-21152324)
chr3 (73-150)||(51848447-51848524)
chr3 (74-146)||(29492777-29492849)
chr3 (74-150)||(53572079-53572155)
chr3 (72-148)||(16332362-16332443)
chr3 (74-150)||(21351502-21351578)
chr3 (73-148)||(15374003-15374078)
chr3 (73-147)||(28758190-28758265)
chr3 (74-147)||(3554490-3554563)
chr3 (73-147)||(51854565-51854639)
chr3 (217-247)||(54518884-54518914)
chr3 (74-150)||(3107723-3107798)
chr3 (73-125)||(21452614-21452666)
chr3 (73-125)||(21457788-21457840)
[»] chr1 (30 HSPs)
chr1 (73-147)||(31536038-31536112)
chr1 (74-147)||(31564755-31564828)
chr1 (73-150)||(3653437-3653514)
chr1 (73-150)||(17145575-17145652)
chr1 (74-150)||(29152110-29152187)
chr1 (74-150)||(6739819-6739895)
chr1 (73-150)||(20278003-20278080)
chr1 (74-150)||(18417427-18417503)
chr1 (73-148)||(21962317-21962393)
chr1 (74-148)||(9269248-9269323)
chr1 (73-148)||(20073737-20073811)
chr1 (74-148)||(21948757-21948832)
chr1 (74-147)||(41050991-41051063)
chr1 (74-148)||(24849415-24849490)
chr1 (72-150)||(24423300-24423377)
chr1 (68-124)||(42625463-42625519)
chr1 (73-124)||(52990028-52990079)
chr1 (74-150)||(18027484-18027560)
chr1 (73-128)||(20397646-20397701)
chr1 (73-124)||(37681337-37681388)
chr1 (72-150)||(38908850-38908929)
chr1 (73-147)||(48427161-48427236)
chr1 (74-147)||(17378720-17378793)
chr1 (74-124)||(37674645-37674695)
chr1 (72-150)||(39093568-39093646)
chr1 (74-147)||(52399550-52399624)
chr1 (71-147)||(26739861-26739938)
chr1 (74-150)||(38911698-38911775)
chr1 (73-125)||(1527550-1527602)
chr1 (73-125)||(36213620-36213672)
[»] scaffold0102 (1 HSPs)
scaffold0102 (73-150)||(12970-13047)
[»] chr7 (29 HSPs)
chr7 (74-150)||(15630779-15630855)
chr7 (74-150)||(37284512-37284588)
chr7 (73-150)||(13964778-13964855)
chr7 (74-150)||(46649090-46649166)
chr7 (75-150)||(32626699-32626774)
chr7 (74-148)||(20020457-20020531)
chr7 (73-150)||(11878368-11878446)
chr7 (71-150)||(2027017-2027097)
chr7 (74-150)||(17727116-17727191)
chr7 (71-150)||(30603609-30603689)
chr7 (73-147)||(15811436-15811511)
chr7 (73-148)||(33404047-33404121)
chr7 (74-148)||(18437957-18438030)
chr7 (73-142)||(11882237-11882306)
chr7 (73-150)||(42057819-42057896)
chr7 (74-150)||(8214094-8214170)
chr7 (73-129)||(26114563-26114619)
chr7 (73-147)||(749151-749226)
chr7 (73-147)||(5188088-5188162)
chr7 (74-129)||(11339098-11339153)
chr7 (74-148)||(19438653-19438728)
chr7 (73-124)||(21756644-21756695)
chr7 (74-129)||(26121164-26121219)
chr7 (74-124)||(2389366-2389416)
chr7 (73-147)||(26090741-26090815)
chr7 (74-124)||(37379238-37379288)
chr7 (74-147)||(40685553-40685627)
chr7 (74-147)||(48988719-48988793)
chr7 (73-148)||(13025574-13025650)
[»] chr4 (29 HSPs)
chr4 (74-150)||(1583159-1583235)
chr4 (74-150)||(49549913-49549989)
chr4 (76-150)||(45003689-45003763)
chr4 (74-148)||(47873170-47873244)
chr4 (74-148)||(54845695-54845769)
chr4 (73-150)||(390374-390451)
chr4 (73-150)||(3260747-3260824)
chr4 (76-150)||(37624098-37624172)
chr4 (74-148)||(34771489-34771565)
chr4 (74-150)||(15471358-15471434)
chr4 (74-150)||(29383517-29383592)
chr4 (74-148)||(45143303-45143379)
chr4 (74-148)||(45152072-45152148)
chr4 (74-150)||(35149900-35149976)
chr4 (73-150)||(23436738-23436816)
chr4 (74-147)||(52499801-52499873)
chr4 (74-142)||(53906031-53906099)
chr4 (74-129)||(3267386-3267441)
chr4 (73-124)||(11203211-11203262)
chr4 (73-124)||(11936358-11936409)
chr4 (74-124)||(11209366-11209416)
chr4 (74-124)||(13481640-13481690)
chr4 (73-150)||(29449489-29449567)
chr4 (74-124)||(35463392-35463442)
chr4 (217-247)||(45003831-45003861)
chr4 (217-247)||(49549815-49549845)
chr4 (73-126)||(13900356-13900409)
chr4 (73-148)||(41405358-41405434)
chr4 (73-125)||(44657844-44657896)
[»] scaffold0466 (1 HSPs)
scaffold0466 (72-150)||(10505-10583)
[»] chr6 (22 HSPs)
chr6 (72-150)||(29484866-29484944)
chr6 (73-150)||(25316417-25316494)
chr6 (73-150)||(26203911-26203988)
chr6 (74-148)||(14580244-14580318)
chr6 (74-151)||(16224438-16224515)
chr6 (73-150)||(33874088-33874165)
chr6 (74-150)||(4106001-4106077)
chr6 (74-148)||(95260-95334)
chr6 (73-150)||(30800203-30800279)
chr6 (74-150)||(21966395-21966470)
chr6 (74-150)||(7238110-7238187)
chr6 (74-150)||(21965726-21965801)
chr6 (73-147)||(15298920-15298995)
chr6 (74-147)||(17308978-17309052)
chr6 (74-148)||(29920863-29920939)
chr6 (74-148)||(10471481-10471556)
chr6 (74-148)||(23022063-23022138)
chr6 (73-150)||(1069913-1069991)
chr6 (74-147)||(15332893-15332966)
chr6 (74-124)||(19097495-19097545)
chr6 (73-147)||(24361931-24362007)
chr6 (73-148)||(10464959-10465035)
[»] chr8 (33 HSPs)
chr8 (74-150)||(26486771-26486847)
chr8 (74-150)||(10949484-10949560)
chr8 (74-150)||(10957489-10957565)
chr8 (74-150)||(14737574-14737650)
chr8 (74-150)||(33799155-33799231)
chr8 (74-147)||(23225500-23225573)
chr8 (74-150)||(37235046-37235122)
chr8 (73-150)||(23746692-23746770)
chr8 (74-150)||(16888050-16888126)
chr8 (74-147)||(13362709-13362782)
chr8 (73-124)||(6587428-6587479)
chr8 (74-150)||(4979632-4979708)
chr8 (67-150)||(27910338-27910421)
chr8 (67-150)||(27956757-27956840)
chr8 (74-147)||(35540351-35540423)
chr8 (74-148)||(41010163-41010240)
chr8 (74-150)||(4521524-4521600)
chr8 (74-148)||(14417308-14417383)
chr8 (73-124)||(16267646-16267697)
chr8 (74-142)||(22988965-22989036)
chr8 (73-124)||(23116516-23116567)
chr8 (73-148)||(41242912-41242986)
chr8 (74-124)||(7004865-7004915)
chr8 (74-124)||(16258904-16258954)
chr8 (74-124)||(27345023-27345073)
chr8 (74-150)||(14765060-14765137)
chr8 (74-148)||(29327419-29327495)
chr8 (74-147)||(33828640-33828712)
chr8 (74-147)||(35033148-35033221)
chr8 (72-124)||(14747271-14747323)
chr8 (73-125)||(21986313-21986365)
chr8 (73-125)||(22003521-22003573)
chr8 (72-124)||(40145063-40145115)
[»] scaffold0126 (1 HSPs)
scaffold0126 (74-150)||(31081-31157)
[»] scaffold0089 (1 HSPs)
scaffold0089 (74-150)||(19305-19381)
[»] scaffold0088 (1 HSPs)
scaffold0088 (73-148)||(31182-31258)
[»] scaffold0457 (1 HSPs)
scaffold0457 (76-150)||(13010-13085)
[»] scaffold0045 (1 HSPs)
scaffold0045 (74-150)||(16795-16870)
[»] scaffold2150 (1 HSPs)
scaffold2150 (73-147)||(858-931)
[»] scaffold0069 (1 HSPs)
scaffold0069 (73-150)||(33467-33542)
[»] scaffold0560 (1 HSPs)
scaffold0560 (74-145)||(1792-1864)
[»] scaffold1426 (1 HSPs)
scaffold1426 (73-124)||(625-676)
[»] scaffold0191 (1 HSPs)
scaffold0191 (74-148)||(6204-6279)
[»] scaffold0123 (1 HSPs)
scaffold0123 (74-148)||(10920-10994)
[»] scaffold0320 (1 HSPs)
scaffold0320 (74-124)||(200-250)
[»] scaffold0103 (1 HSPs)
scaffold0103 (74-124)||(24609-24659)
[»] scaffold0106 (1 HSPs)
scaffold0106 (74-142)||(28107-28175)
[»] scaffold0363 (1 HSPs)
scaffold0363 (74-148)||(1336-1411)
[»] scaffold0011 (1 HSPs)
scaffold0011 (75-142)||(57477-57544)
[»] scaffold0654 (1 HSPs)
scaffold0654 (74-147)||(8536-8610)
[»] scaffold0606 (1 HSPs)
scaffold0606 (73-147)||(414-488)
[»] scaffold0266 (1 HSPs)
scaffold0266 (78-124)||(14412-14458)
[»] scaffold0329 (1 HSPs)
scaffold0329 (76-129)||(17387-17439)
[»] scaffold0205 (1 HSPs)
scaffold0205 (74-142)||(23728-23797)
[»] scaffold0188 (1 HSPs)
scaffold0188 (71-124)||(5441-5494)
[»] scaffold0023 (1 HSPs)
scaffold0023 (73-142)||(157483-157555)
[»] scaffold0018 (1 HSPs)
scaffold0018 (74-150)||(63950-64025)
[»] scaffold0009 (1 HSPs)
scaffold0009 (73-148)||(252889-252965)


Alignment Details
Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40450825 - 40450752
Alignment:
Q  1 agggtatgtattaccttttttctcatcatcttcatttaatctttttaaatattgtgtataaaatgatgtgtttt 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40450825 agggtatgtattaccttttctctcatcatcttcatttaatctttttaaatattgtgtataaaatgatgtgtttt 40450752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 44091919 - 44091840
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  44091919 ttttgtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccacaacgggcatgttacacgt 44091840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 29065778 - 29065854
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  29065778 tgtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccacaacgggcatgttacacgt 29065854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 33352 - 33430
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  33352 tttgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaacgggcatgctacacgt 33430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 2942257 - 2942335
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  2942257 tttgtaacaccctgttacccaaaaacaattatataacaaatattcatcagagtagttccacaacgggcatgttacacgt 2942335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 11361127 - 11361050
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  11361127 ttgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 11361050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 28292026 - 28292101
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    ||||||||||| | |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  28292026 tttgtaacacctcattacccaa-aacaattaaataacgaatattcatcagagtatttccacaacgggcatgctacac 28292101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 4076717 - 4076799
Alignment:
Q  69 tgttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||||||| | |||||| ||| ||||||| |||||||||| |||||| ||||||||||||||||||    
T  4076717 tgttttgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaaacgggcatgctacacgt 4076799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 1066343 - 1066420
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||| | |||||| |||  |||||||||| ||||||||||||||||||||||||    
T  1066343 ttgtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccacaacgggcatgctacacgt 1066420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 1060961 - 1061037
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||| | |||||| |||  |||||||||| ||||||||||||||||||||||||    
T  1060961 tgtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccacaacgggcatgctacacgt 1061037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 27728814 - 27728884
Alignment:
Q  76 taacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||| | |||||| ||| ||| ||| |||||||||| |||||||||||||||||||||    
T  27728814 taacaccccgttacccaaaagcaattaaatagcaa-tatacatcagagtaattccacaacgggcatgctaca 27728884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 36593656 - 36593729
Alignment:
Q  74 tgtaacaccccgttaccc-aacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||| || |||||||| ||| ||| ||| |||||||||| |||||||||||||||||||||    
T  36593656 tgtaacaccccgttaccccaaaaacaattaaatagcaa-tatacatcagagtaattccacaacgggcatgctaca 36593729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 30197400 - 30197324
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||| | ||| || |||  |||||||||| | ||||||||||||||||||||||    
T  30197400 tgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgt 30197324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40276435 - 40276494
Alignment:
Q  1 agggtatgtattaccttttttctcatcatcttcatttaatctttttaaatattgtgtataa 61  Q
    ||||||||||||  ||||||||| | |||||||||||| ||||||||||||||||||||||    
T  40276435 agggtatgtattgtcttttttctgaacatcttcattta-tctttttaaatattgtgtataa 40276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 44109530 - 44109597
Alignment:
Q  3 ggtatgtattaccttttttctcatcatcttcatttaatctttttaaatattgtgtataaaatgatgtgt 71  Q
    ||||||||||| ||||| ||| |||||| ||||||| |||||||||||||||||||||| || ||||||    
T  44109530 ggtatgtattatcttttatctgatcatcatcattta-tctttttaaatattgtgtataatataatgtgt 44109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 21604071 - 21604145
Alignment:
Q  74 tgtaacaccccgttacccaacaa-caattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||| | || |||| | |||||| |||  |||||||||| |||||||||||||||||||||    
T  21604071 tgtaacaccccgttaccccaaaagcaataaaataacatataaacatcagagtaattccacaacgggcatgctaca 21604145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 35244827 - 35244777
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  35244827 tgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagt 35244777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 28926759 - 28926836
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    ||||||||||||||||||||||| | |||||| ||| || |||  |||||||||||||| |  |||||||||||||||    
T  28926759 ttttgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 28926836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 20964134 - 20964210
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||| | ||| || |||  |||||||||| | || |||||||||||||||||||    
T  20964134 tgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccccaacgggcatgctacacgt 20964210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 42552464 - 42552539
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | |||||| ||| || |||  |||||||||||||| |  |||||||||||||||    
T  42552464 ttgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 42552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 2942403 - 2942433
Alignment:
Q  217 atagcagcggaatagttttcaaatcaataac 247  Q
    |||||||||||||||||||||||||||||||    
T  2942403 atagcagcggaatagttttcaaatcaataac 2942433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 24427666 - 24427616
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||||||| |||||||||    
T  24427666 tgtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagt 24427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 27036553 - 27036603
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||||||| |||||||||    
T  27036553 tgtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagt 27036603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 29065922 - 29065952
Alignment:
Q  217 atagcagcggaatagttttcaaatcaataac 247  Q
    |||||||||||||||||||||||||||||||    
T  29065922 atagcagcggaatagttttcaaatcaataac 29065952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 8890755 - 8890686
Alignment:
Q  74 tgtaacaccccgtta-cccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatg 142  Q
    ||||||||||||||| ||||| |||||||| |||||||||   ||||||||||| |||  ||||||||||    
T  8890755 tgtaacaccccgttatcccaaaaacaattaaataacaaatccacatcagagtatatcccaaacgggcatg 8890686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 19655196 - 19655127
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataa-caaatattcatcagagtatttccacaacgggcatg 142  Q
    |||||||||||||||||||| |||||||| ||||  ||| || ||||||||||  ||| |||||||||||    
T  19655196 tgtaacaccccgttacccaaaaacaattaaataattaaacatacatcagagtaaatccccaacgggcatg 19655127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 40584782 - 40584862
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatata--acaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||| ||||||||| |||||| | |||  | | |||| |||||||||| |||||| ||||||||||||||||||    
T  40584782 ttgtaacaccctgttacccaaaaacaataacatagcatatatatacatcagagtaattccacaaacgggcatgctacacgt 40584862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 21121332 - 21121407
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||| ||| | |||||| ||||||  ||| ||||||||||  || || |||||||||||||||||    
T  21121332 tgtaacaccccgttactcaaaagcaattaaataacatttatacatcagagta-atctacgacgggcatgctacacgt 21121407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 41879580 - 41879501
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  41879580 ttttgtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccacaacgggcatgttacacgt 41879501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 20346439 - 20346516
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20346439 ttgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaacgggcatgctacacgt 20346516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 20339846 - 20339922
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20339846 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaacgggcatgctacacgt 20339922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 18895853 - 18895777
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  18895853 tgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 18895777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 19801182 - 19801108
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||  |||||||||||| |||||||||    
T  19801182 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtgattccacaacgggtatgctacac 19801108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 40011831 - 40011754
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| ||||||| |||||||||| |||||| |||||||||||||||||    
T  40011831 ttgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccaccacgggcatgctacacgt 40011754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 5583136 - 5583059
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||| ||||||| |||||||||| |||||| ||||||||||||||||||    
T  5583136 tgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaaacgggcatgctacacgt 5583059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 15460721 - 15460798
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| ||| ||  |||||||||| ||||||||||||||||||||||||    
T  15460721 ttgtaacaccccgttacccaaaagcaattaaatagcaattaaacatcagagtagttccacaacgggcatgctacacgt 15460798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 11994395 - 11994468
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||| | |||||| |||  |||||||||| |||||||||||||||||||||    
T  11994395 tgtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccacaacgggcatgctaca 11994468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 43028292 - 43028364
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||||| ||| ||| ||| |||||||||| |||||||||||||||||||||    
T  43028292 tgtaacaccccgttacccaaaagcaattaaatagcaa-tatacatcagagtaattccacaacgggcatgctaca 43028364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 22500243 - 22500296
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  22500243 ttttgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagt 22500296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 37540874 - 37540797
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| || |||  |||||||||| | || |||||||||||||||||||    
T  37540874 ttgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtaatcccgcaacgggcatgctacacgt 37540797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 30780318 - 30780397
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac--aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| || |||| |||||||||| ||||||  |||| |||||||||||||    
T  30780318 ttgtaacaccccgttacccaaaagcaattaaatagcatatatacatcagagtaattccacataacgagcatgctacacgt 30780397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 37548417 - 37548341
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||| || |||  |||||||||| | || |||||||||||||||||||    
T  37548417 tgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtaatcccgcaacgggcatgctacacgt 37548341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 5453746 - 5453801
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc 129  Q
    |||||||||||||||||||| |  ||||| |||||||||| |||||||||||||||    
T  5453746 tgtaacaccccgttacccaaaagtaattaaataacaaataatcatcagagtatttc 5453801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 22506823 - 22506874
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  22506823 ttgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagt 22506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 25845588 - 25845670
Alignment:
Q  67 tgtgttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacg 149  Q
    |||| |||||||||||||||||||||| | |||||| ||||||  ||| ||||||||||  ||||| |||||||||||||||||    
T  25845588 tgtggtttgtaacaccccgttacccaaaagcaattaaataacatttatacatcagagta-atccacaaacgggcatgctacacg 25845670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 25852229 - 25852306
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||||||  ||| ||||||||||  ||||| ||||||||||||||||||    
T  25852229 ttgtaacaccccgttacccaaaagcaattaaataacatttatacatcagagta-atccacaaacgggcatgctacacgt 25852306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 5342537 - 5342461
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    |||||||||| |||||||||| | |||||| |||  ||||||||||||||||| ||| |  ||||||||||||||||    
T  5342537 ttgtaacacctcgttacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctacac 5342461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 22249086 - 22249010
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    ||||||||||||||||||||||| | || | | ||| || | || |||||||||| || ||||||||||||||||||    
T  22249086 ttttgtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaatttcacaacgggcatgctaca 22249010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 14615801 - 14615727
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | || | | ||| || | || |||||||||| || ||||||||||||||||||    
T  14615801 ttgtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaatttcacaacgggcatgctaca 14615727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 41879433 - 41879403
Alignment:
Q  217 atagcagcggaatagttttcaaatcaataac 247  Q
    |||||||||||||||||||||||||||||||    
T  41879433 atagcagcggaatagttttcaaatcaataac 41879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 318 - 246
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcat----cagagtatttccacaacgggcatg 142  Q
    ||||||||||||||||||||| || ||||| |||| ||||| ||||    ||||||||||||| ||||||||||    
T  318 ttgtaacaccccgttacccaa-aataattaaataataaataatcatacatcagagtatttccaaaacgggcatg 246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 19270 - 19193
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  19270 ttgtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccacaacgggcatgttacacgt 19193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 54518740 - 54518816
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  54518740 tgtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccacaacgggcatgttacacgt 54518816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 9772759 - 9772684
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||  ||||||||||||| ||||||||    
T  9772759 ttgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtgattccacaacgggcttgctacac 9772684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 10767038 - 10767116
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaa-tattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  10767038 ttgtaacaccccgttacccaaaagcaattaaataacaaaatatacatcagagtagttccacaacgggcatgctacacgt 10767116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 54834054 - 54833976
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  54834054 ttttgtaacaccccgttacccaaaagcaattaaataacaattatacatcagagta-atccacaacgggcatgctacacgt 54833976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 48775481 - 48775405
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtattt--ccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| | || ||| |||||||||||||||||||||||||  ||| ||||||||||||||||    
T  48775481 tgtaacaccccgttacccaaaagcatttaaataacaaatattcatcagagtatttcaccaaaacgggcatgctacac 48775405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 45610949 - 45611025
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||| ||| | |||||| ||| ||||||| |||||||||| |||||||||||| |||||||||||    
T  45610949 tgtaacaccccgttactcaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggtatgctacacgt 45611025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 23866651 - 23866577
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||||| | |||||| ||| ||| ||| |||||||||| |||||||||||||||||||||    
T  23866651 tttgtaacaccccgttacccaaaagcaattaaatagcaa-tatacatcagagtaattccacaacgggcatgctaca 23866577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 21152324 - 21152252
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||||| ||| ||| ||| |||||||||| |||||||||||||||||||||    
T  21152324 tgtaacaccccgttacccaaaagcaattaaatagcaa-tatacatcagagtaattccacaacgggcatgctaca 21152252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 51848447 - 51848524
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||| | ||| || |||  |||||||||| | ||||||||||||||||||||||    
T  51848447 ttgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgt 51848524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 29492777 - 29492849
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctac 146  Q
    |||||||||||||||||||| | |||||| ||| || |||  |||||||||| | ||||||||||||||||||    
T  29492777 tgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtaatcccacaacgggcatgctac 29492849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 53572155 - 53572079
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||| | ||| || |||  |||||||||| | ||||||||||||||||||||||    
T  53572155 tgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgt 53572079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 16332443 - 16332362
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatatt----catcagagtatttccaca-acgggcatgctacac 148  Q
    |||||||||||||||||||||| | || ||| |||||||||| |    |||||||||| ||||||| |||||||||||||||    
T  16332443 tttgtaacaccccgttacccaaaatcatttaaataacaaataattcaacatcagagtagttccacatacgggcatgctacac 16332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 21351502 - 21351578
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||| |||||||||||| | |||| | ||| || |||  |||||||||| | ||||||||||||||||||||||    
T  21351502 tgtaacatcccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgt 21351578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 15374003 - 15374078
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    ||||||||||| ||||||||| |  ||||| |||  ||||||||||||||||| |||   ||||||||||||||||    
T  15374003 ttgtaacaccctgttacccaaaagtaattaaatataaaatattcatcagagtaattcacaaacgggcatgctacac 15374078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 28758190 - 28758265
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | |||||| ||| || |||  |||||||||||||| |  |||||||||||||||    
T  28758190 ttgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 28758265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 3554563 - 3554490
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||| | |||||| |||  |||||||||| |||||| |||||||||||||||    
T  3554563 tgtaacaccccgttacccaa-agcaataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 3554490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 51854639 - 51854565
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | || | | ||| || | || |||||||||| || ||||||||||||||||||    
T  51854639 ttgtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaatttcacaacgggcatgctaca 51854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 54518884 - 54518914
Alignment:
Q  217 atagcagcggaatagttttcaaatcaataac 247  Q
    |||||||||||||||||||||||||||||||    
T  54518884 atagcagcggaatagttttcaaatcaataac 54518914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 3107723 - 3107798
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||| | ||| |  |||  |||||||||||  ||||||||||||||||||||||    
T  3107723 tgtaacaccccgttacccaaaagcaataaaatagcgtataaacatcagagtatc-ccacaacgggcatgctacacgt 3107798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 21452666 - 21452614
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagta 125  Q
    ||||||||||| || |||||| | |||||| |||||||||| |||||||||||    
T  21452666 ttgtaacacccggtcacccaaaagcaattaaataacaaataatcatcagagta 21452614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 21457840 - 21457788
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagta 125  Q
    ||||||||||| || |||||| | |||||| |||||||||| |||||||||||    
T  21457840 ttgtaacacccggtcacccaaaagcaattaaataacaaataatcatcagagta 21457788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 31536112 - 31536038
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  31536112 ttgtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccacaacgggcatgttaca 31536038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 31564828 - 31564755
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  31564828 tgtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccacaacgggcatgttaca 31564755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 3653514 - 3653437
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  3653514 ttgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 3653437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 17145575 - 17145652
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||| |||||||||||| |||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  17145575 ttgtaacatcccgttacccaaaaacaattaaataacaattatacatcagagtaattccacaacgggcatgctacacgt 17145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 29152187 - 29152110
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  29152187 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaaacgggcatgctacacgt 29152110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 6739819 - 6739895
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  6739819 tgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtaattccacaacgggcatgctacacgt 6739895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 20278080 - 20278003
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||| |||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  20278080 ttgtaacaccccgttaaccaaaagcaattaaatagcaaatatacatcagagtaattccacaacgggcatgctacacgt 20278003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 18417427 - 18417503
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||| ||||||||||||||||||    
T  18417427 tgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtaattccataacgggcatgctacacgt 18417503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 21962317 - 21962393
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    ||||||||||||||||||||| |  ||||| |||||||||||||||||||||||||| |  ||||||||||||||||    
T  21962317 ttgtaacaccccgttacccaaaagtaattaaataacaaatattcatcagagtatttcaccaaacgggcatgctacac 21962393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 9269248 - 9269323
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatatt-catcagagtatttccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |  ||||| |||||||||||| |||||||||| |||||||||||| |||||||||    
T  9269248 tgtaacaccccgttacccaaaagtaattaaataacaaatatttcatcagagtaattccacaacgggtatgctacac 9269323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 20073811 - 20073737
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    ||||||||||| | ||||||| | || ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  20073811 ttgtaacaccc-gctacccaaaagcatttaaataacaaatattcatcagagtatttccacaatgggcatgctacac 20073737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 21948757 - 21948832
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||||||||||| |  ||||||||||||||||    
T  21948757 tgtaacaccccgttacccaaaagtaattaaataacaaatattcatcagagtatttcaccaaacgggcatgctacac 21948832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 41050991 - 41051063
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||||| ||| ||| ||| |||||||||| |||||||||||||||||||||    
T  41050991 tgtaacaccccgttacccaaaagcaattaaatagcaa-tatacatcagagtaattccacaacgggcatgctaca 41051063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 24849415 - 24849490
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacac 148  Q
    |||||||||||||||||||| |  ||||| ||||||||||||||||| |||| ||| || ||||||||||||||||    
T  24849415 tgtaacaccccgttacccaaaagtaattaaataacaaatattcatcaaagtaattcaacaaacgggcatgctacac 24849490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 24423300 - 24423377
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||||| |||||||| ||||||  ||| ||||||||||  ||||||| || ||||||||||||    
T  24423300 tttgtaacaccccgttacccaaaaacaattaaataacatttatacatcagagta-atccacaatggacatgctacacgt 24423377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 42625463 - 42625519
Alignment:
Q  68 gtgttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||| |||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  42625463 gtgttttataacaccccgttacccaaaagcaattaaataacaaatattaatcagagt 42625519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 52990028 - 52990079
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  52990028 ttgtaacaccccgttacccaaaatcaattaaataacaaatattaatcagagt 52990079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 18027560 - 18027484
Alignment:
Q  74 tgtaacaccccgttacccaacaa-caattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| || |||||| ||||||  ||| ||| |||||| | ||||||||||||||||||||||    
T  18027560 tgtaacaccccgttacccaaaaagcaattaaataacatttatacataagagtaat-ccacaacgggcatgctacacgt 18027484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 20397701 - 20397646
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtattt 128  Q
    ||||||||||||||||||||| |  ||||| ||||| |||| ||||||||||||||    
T  20397701 ttgtaacaccccgttacccaaaagtaattaaataacgaataatcatcagagtattt 20397646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 37681337 - 37681388
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  37681337 ttgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 37681388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 38908929 - 38908850
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    |||||||||||||||||||||| |  ||| | ||| |  |||| |||||||||| |||||| ||||||||||||||||||    
T  38908929 tttgtaacaccccgttacccaaaacaaataaaatagcttatatacatcagagtaattccacaaacgggcatgctacacgt 38908850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 48427161 - 48427236
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | |||||| ||| || |||  |||||||||||||| |  |||||||||||||||    
T  48427161 ttgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 48427236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 17378720 - 17378793
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||| | |||||| |||  |||||||||| |||||| |||||||||||||||    
T  17378720 tgtaacaccccgttacccaa-agcaataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 17378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 37674645 - 37674695
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  37674645 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 37674695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 39093568 - 39093646
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||| |||||||||| | |||| | ||| || |||  |||||||||| | |||| |||||||||||||||||    
T  39093568 tttgtaacacctcgttacccaaaagcaataaaatagcatataaacatcagagtaatcccaccacgggcatgctacacgt 39093646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 52399550 - 52399624
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    |||||||||||||||||||| |||||| | ||| || |||  |||||||||||||| |  |||||||||||||||    
T  52399550 tgtaacaccccgttacccaaaaacaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 52399624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 26739938 - 26739861
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    ||||||||||||||||||||||| | |||| | ||| || |||  |||||||||||||| |  |||||||||||||||    
T  26739938 ttttgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 26739861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 38911775 - 38911698
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    |||||||||||||||||||| |  ||| | ||| |  |||| |||||||||| |||||| ||||||||||||||||||    
T  38911775 tgtaacaccccgttacccaaaacaaataaaatagcttatatacatcagagtaattccacaaacgggcatgctacacgt 38911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 1527602 - 1527550
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagta 125  Q
    ||||||||||||||||||||| |  || || |||||||||| |||||||||||    
T  1527602 ttgtaacaccccgttacccaaaagtaaataaataacaaataatcatcagagta 1527550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 36213672 - 36213620
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagta 125  Q
    ||||||||||||||||||||| |  || || |||||||||| |||||||||||    
T  36213672 ttgtaacaccccgttacccaaaagtaaataaataacaaataatcatcagagta 36213620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 13047 - 12970
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  13047 ttgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaacgggcatgctacacgt 12970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 15630779 - 15630855
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  15630779 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaacgggcatgctacacgt 15630855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 37284512 - 37284588
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  37284512 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaacgggcatgctacacgt 37284588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 13964855 - 13964778
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  13964855 ttgtaacaccccgttacccaaaagcaattaaataacaaatatacatcagagtaattccacaacggacatgctacacgt 13964778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 46649090 - 46649166
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| |||||| |||| |||||||||| ||||||||||||||||||||||||    
T  46649090 tgtaacaccccgttacccaaaagcaattaaataacagatatacatcagagtaattccacaacgggcatgctacacgt 46649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 32626699 - 32626774
Alignment:
Q  75 gtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  32626699 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 32626774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 20020531 - 20020457
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccaca-acgggcatgctacac 148  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| || |||| |||||||||||||||    
T  20020531 tgtaacaccccgttacccaaaaacaattaaataacaaatattcatcagagtactt-cacatacgggcatgctacac 20020457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 11878368 - 11878446
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| ||||||| |||||||||| |||||| ||||||||||||||||||    
T  11878368 ttgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaaacgggcatgctacacgt 11878446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 2027097 - 2027017
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||||| |||||| | ||| || |||| |||||||||| |||||| ||||||||||||||||||    
T  2027097 ttttgtaacaccccgttacccaaaaacaataacatagcatatatacatcagagtaattccacaaacgggcatgctacacgt 2027017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 17727191 - 17727116
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||| || |||||||| ||||||  ||| ||||||||||  |||||||||||||||||||||||    
T  17727191 tgtaacaccccgttaccaaaaaacaattaaataacatttatacatcagagta-atccacaacgggcatgctacacgt 17727116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 30603689 - 30603609
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||||| | |||||| ||| |||| || |||||||||| ||| || ||||||||||||||||||    
T  30603689 ttttgtaacaccccgttacccaaaagcaattaaatagcaaacatacatcagagtaattctacaaacgggcatgctacacgt 30603609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 15811436 - 15811511
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | |||||| |||  ||||||||||||||||| ||| |  |||||||||||||||    
T  15811436 ttgtaacaccccgttacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctaca 15811511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 33404047 - 33404121
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    |||||||| |||||||||||| |||||||| ||||||  |||  |||||||||  |||||||||||||||||||||    
T  33404047 ttgtaacatcccgttacccaaaaacaattaaataacatttatatatcagagta-atccacaacgggcatgctacac 33404121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 18438030 - 18437957
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |||||||| ||||||  ||  ||||||||||  ||| |||||||||||||||||    
T  18438030 tgtaacaccccgttacccaaaaacaattaaataacatttaaacatcagagta-atccgcaacgggcatgctacac 18437957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 11882306 - 11882237
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatg 142  Q
    |||||||||||||||| || | |||||||| ||||||||||  ||||||||||| |||  ||||||||||    
T  11882306 ttgtaacaccccgttatcccaaaacaattaaataacaaataaacatcagagtatatcccaaacgggcatg 11882237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 42057819 - 42057896
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| |||| | | ||| || |||  |||||||||| | |||||||||||||| |||||||    
T  42057819 ttgtaacaccccgttacccaaaaacagtaaaatagcatataaacatcagagtaatcccacaacgggcatgttacacgt 42057896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 8214170 - 8214094
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| |||| | | ||| || |||  |||||||||| | |||||||||||||| |||||||    
T  8214170 tgtaacaccccgttacccaaaaacagtaaaatagcatataaacatcagagtaatcccacaacgggcatgttacacgt 8214094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 26114619 - 26114563
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc 129  Q
    ||||||||||||||||||||| |  ||||| |||||||||| ||||||||| |||||    
T  26114619 ttgtaacaccccgttacccaaaacaaattaaataacaaataatcatcagaggatttc 26114563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 749151 - 749226
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | |||||| ||| || |||  |||||||||||||| |  |||||||||||||||    
T  749151 ttgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 749226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 5188162 - 5188088
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctaca 147  Q
    ||||||||||||||||||||| | |||| | |||||| |||  |||||||||| |||||| |||||||||||||||    
T  5188162 ttgtaacaccccgttacccaa-agcaataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 5188088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 11339098 - 11339153
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc 129  Q
    |||||||||||||||||||| |  ||||| |||||||||||  |||||||||||||    
T  11339098 tgtaacaccccgttacccaaaagtaattaaataacaaatatatatcagagtatttc 11339153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 19438653 - 19438728
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    ||||||||||| |||||||| | |||||| |||  ||||||||||||||||| ||| |  ||||||||||||||||    
T  19438653 tgtaacaccccattacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctacac 19438728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 21756644 - 21756695
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  21756644 ttgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 21756695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 26121219 - 26121164
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc 129  Q
    |||||||||||||||| ||| |  ||||| |||||||||| |||||||||||||||    
T  26121219 tgtaacaccccgttactcaaaacaaattaaataacaaataatcatcagagtatttc 26121164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 2389416 - 2389366
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  2389416 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 2389366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 26090815 - 26090741
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | || | | ||| || | || |||||||||| ||||| |||||||||||||||    
T  26090815 ttgtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaattccaaaacgggcatgctaca 26090741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 37379238 - 37379288
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  37379238 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 37379288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 40685627 - 40685553
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||||| ||| || |||  |||||||||||||| |  |||||||||||||||    
T  40685627 tgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 40685553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 48988793 - 48988719
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||||| ||| || |||  |||||||||||||| |  |||||||||||||||    
T  48988793 tgtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 48988719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 13025574 - 13025650
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    ||||||||||||||||||||| |  ||||| |||  |||||||||| |||||| ||| |  ||||||||||||||||    
T  13025574 ttgtaacaccccgttacccaaaagtaattaaatacaaaatattcattagagtaattcaccaaacgggcatgctacac 13025650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 1583159 - 1583235
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  1583159 tgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaacgggcatgctacacgt 1583235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 49549989 - 49549913
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||    
T  49549989 tgtaacaccccgttacccaaaaacaattatattacaaatattcatcagagtagttccacaacgggcatgttacacgt 49549913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 45003689 - 45003763
Alignment:
Q  76 taacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  45003689 taacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccaccacgggcatgttacacgt 45003763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 47873244 - 47873170
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  47873244 tgtaacaccccgttacacaaaaacaattaaataacaaatattcatcagagtaattccacaacgggtatgctacac 47873170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 54845769 - 54845695
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  54845769 tgtaacaccccattacccaaaaacaattaaataacaaatattcatcagagtaattccacaacgggtatgctacac 54845695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 390374 - 390451
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  390374 ttgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 390451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 3260824 - 3260747
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  3260824 ttgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 3260747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 37624172 - 37624098
Alignment:
Q  76 taacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||| ||||||||| | |||||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  37624172 taacaccctgttacccaaaagcaattaaataacaaatattcatcagagtaatttcacaacgggcatgctacacgt 37624098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 34771489 - 34771565
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtattt--ccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||  ||| ||||||||||||||||    
T  34771489 tgtaacaccccgttacccaaaaacatttaaataacaaatattcatcagagtatttcaccaaaacgggcatgctacac 34771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 15471434 - 15471358
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||| | ||| || |||| |||||||||| ||||||||||||||||||||||||    
T  15471434 tgtaacaccccgttacccaaaagcaataaaatagcatatatacatcagagtaattccacaacgggcatgctacacgt 15471358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 29383592 - 29383517
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||| |||| |||||||| ||||||  ||| ||||||||||  |||||||||||||||||||||||    
T  29383592 tgtaacaccccgttatccaaaaacaattaaataacatttatacatcagagta-atccacaacgggcatgctacacgt 29383517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 45143379 - 45143303
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtattt--ccacaacgggcatgctacac 148  Q
    ||||||||||||||| |||| | || ||| |||||||||||||||||||||||||  ||| ||||| ||||||||||    
T  45143379 tgtaacaccccgttatccaaaagcatttaaataacaaatattcatcagagtatttcaccaaaacggacatgctacac 45143303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 45152148 - 45152072
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtattt--ccacaacgggcatgctacac 148  Q
    ||||||||||||||| |||| | || ||| |||||||||||||||||||||||||  ||| ||||| ||||||||||    
T  45152148 tgtaacaccccgttatccaaaagcatttaaataacaaatattcatcagagtatttcaccaaaacggacatgctacac 45152072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 35149976 - 35149900
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||| | ||| || |||  |||||||||| | ||||||||||||||||||||||    
T  35149976 tgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgt 35149900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 23436816 - 23436738
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| |||||| |   | || |||| |||||||||| |||||| ||||||||||||||||||    
T  23436816 ttgtaacaccccgttacccaaaaacaataactcagcatatatacatcagagtaattccacaaacgggcatgctacacgt 23436738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 52499801 - 52499873
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||||| ||| ||| ||| ||| |||||| |||||||| ||||||||||||    
T  52499801 tgtaacaccccgttacccaaaagcaattaaatagcaa-tatacataagagtaattccacaaagggcatgctaca 52499873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 53906099 - 53906031
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatg 142  Q
    ||||||||||||||| || | |||||||| ||||||||||  ||||||||||| |||  ||||||||||    
T  53906099 tgtaacaccccgttatcccaaaacaattaaataacaaataaacatcagagtatatcccaaacgggcatg 53906031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 3267441 - 3267386
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc 129  Q
    |||||||||||||||||||| |  ||||| |||||||||||  |||||||||||||    
T  3267441 tgtaacaccccgttacccaaaagtaattaaataacaaatatatatcagagtatttc 3267386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 11203262 - 11203211
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  11203262 ttgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 11203211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 11936358 - 11936409
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  11936358 ttgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 11936409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 11209416 - 11209366
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  11209416 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 11209366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 13481690 - 13481640
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||| |||| | |||||| |||||||||||| ||||||||    
T  13481690 tgtaacaccccgttatccaaaagcaattaaataacaaatattaatcagagt 13481640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 29449567 - 29449489
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| |  ||| | ||| |  |||| |||||||||| |||||| ||||||||||||||||||    
T  29449567 ttgtaacaccccgttacccaaaacaaataaaatagcttatatacatcagagtaattccacaaacgggcatgctacacgt 29449489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 35463442 - 35463392
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  35463442 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 35463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 45003831 - 45003861
Alignment:
Q  217 atagcagcggaatagttttcaaatcaataac 247  Q
    |||||||||||||||||||||||||||||||    
T  45003831 atagcagcggaatagttttcaaatcaataac 45003861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 49549845 - 49549815
Alignment:
Q  217 atagcagcggaatagttttcaaatcaataac 247  Q
    |||||||||||||||||||||||||||||||    
T  49549845 atagcagcggaatagttttcaaatcaataac 49549815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 13900409 - 13900356
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtat 126  Q
    |||||||||||||||| |||| | |||||| |||| ||||| ||||||||||||    
T  13900409 ttgtaacaccccgttatccaaaagcaattaaataataaataatcatcagagtat 13900356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 41405434 - 41405358
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacac 148  Q
    ||||||||||||||||||||| |  ||||  |||  ||||||||||||||||| |||  | ||||||||||||||||    
T  41405434 ttgtaacaccccgttacccaaaagtaatttaatacaaaatattcatcagagtaattcatcaaacgggcatgctacac 41405358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 44657896 - 44657844
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagta 125  Q
    ||||||||||||||||||||| | ||| || |||| ||||| |||||||||||    
T  44657896 ttgtaacaccccgttacccaaaagcaaataaataataaataatcatcagagta 44657844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 10505 - 10583
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  10505 tttgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaatcccacaacgggcatgctacacgt 10583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 29484944 - 29484866
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  29484944 tttgtaacaccccgttaccgaaaaacaattatataacaaatattcatcagagtagttccacaacaggcatgttacacgt 29484866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 25316494 - 25316417
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| |||||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  25316494 ttgtaacaccccgttacccaaaaacaattaaatatcaaatatacatcagagtagttccacaacgggcatgctacacgt 25316417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 26203988 - 26203911
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| |||||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  26203988 ttgtaacaccccgttacccaaaaacaattaaatatcaaatatacatcagagtagttccacaacgggcatgctacacgt 26203911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 14580244 - 14580318
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    |||||||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  14580244 tgtaacaccccgttaccccaaaaaaattaaataacaaatattcatcagagtatttccacaacgggaatgctacac 14580318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 16224515 - 16224438
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgta 151  Q
    |||||||||||||||||||| | |||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  16224515 tgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtaattccacaacgggcatgctacacgta 16224438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 33874088 - 33874165
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  33874088 ttgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 33874165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 4106001 - 4106077
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||| |||| | |||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  4106001 tgtaacaccccgttatccaaaagcaattaaataacaaatatttatcagagtaattccacaacggccatgctacacgt 4106077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 95334 - 95260
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| | |||||| |||| |||||||||| |||||| |||||||||||| |||||||||    
T  95334 tgtaacaccccgttacccaaaagcaattaaataataaatattcataagagtaattccacaacgggtatgctacac 95260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 30800279 - 30800203
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  30800279 ttgtaacaccccgttacccaaaagcaattaaataacaattatacatcagagta-atccacaacgggcatgctacacgt 30800203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 21966470 - 21966395
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| |||||||| ||||||  ||| ||||||||||  |||||||||||||||||||||||    
T  21966470 tgtaacaccccgttacccaaaaacaattaaataacatttatacatcagagta-atccacaacgggcatgctacacgt 21966395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 7238187 - 7238110
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    |||||||||||||||||||| |||||| | ||| || |||| |||||||||| |||||| ||||||||||||||||||    
T  7238187 tgtaacaccccgttacccaaaaacaataacatagcatatatacatcagagtaattccacaaacgggcatgctacacgt 7238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 21965726 - 21965801
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| |||||||| ||||||  ||| || |||||||  |||||||||||||||||||||||    
T  21965726 tgtaacaccccgttacccaaaaacaattaaataacatttatacaacagagta-atccacaacgggcatgctacacgt 21965801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 15298920 - 15298995
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctaca 147  Q
    ||||||||||||||||||||| | |||| | |||||| |||  |||||||||| |||||| |||||||||||||||    
T  15298920 ttgtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 15298995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 17308978 - 17309052
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||| | |||||| |||  |||||||||| |||||| |||||||||||||||    
T  17308978 tgtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 17309052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 29920863 - 29920939
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtattt--ccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |  ||||| |||  ||||||||||||||||| ||  ||| ||||||||||||||||    
T  29920863 tgtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaaacgggcatgctacac 29920939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 10471556 - 10471481
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacac 148  Q
    |||||||||||||||||||| |  ||||| |||  ||||||||||||||||| |||  | ||||||||||||||||    
T  10471556 tgtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcatcaaacgggcatgctacac 10471481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 23022138 - 23022063
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    ||||||||||||||| || | |||||||| |||  ||||||||||||||||| ||| |  ||||||||||||||||    
T  23022138 tgtaacaccccgttatcccaaaacaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 23022063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 1069913 - 1069991
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | |||| | ||| || |||  |||||||||| | |||| ||||||||||||||||||    
T  1069913 ttgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaaacgggcatgctacacgt 1069991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 15332966 - 15332893
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||| | |||||| |||  |||||||||| |||||| |||||||||||||||    
T  15332966 tgtaacaccccgttacccaa-agcaataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 15332893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 19097545 - 19097495
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||||||| |||||||||    
T  19097545 tgtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagt 19097495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 24361931 - 24362007
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtattt--ccacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| |  || || |||||||||| ||||||||||| ||  ||| |||||| ||||||||    
T  24361931 ttgtaacaccccgttacccaaaagtaaataaataacaaataatcatcagagtaattcaccaaaacgggtatgctaca 24362007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 10465035 - 10464959
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacac 148  Q
    ||||||||||||| ||||||| |  ||||| |||  ||||||||||||||||| |||  | ||||||||||||||||    
T  10465035 ttgtaacaccccgctacccaaaagtaattaaatataaaatattcatcagagtaattcatcaaacgggcatgctacac 10464959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 26486847 - 26486771
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  26486847 tgtaacaccccgttacccaaaagcaattaaataacaaatattcgtcagagtaattccacaacgggcatgctacacgt 26486771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 10949560 - 10949484
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| |||||||| |||  ||||||||||||||||| ||||||||||||||||| ||||||    
T  10949560 tgtaacaccccgttacccaaaaacaattaaatagtaaatattcatcagagtaattccacaacgggcatgccacacgt 10949484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 10957565 - 10957489
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| |||||||| |||  ||||||||||||||||| ||||||||||||||||| ||||||    
T  10957565 tgtaacaccccgttacccaaaaacaattaaatagtaaatattcatcagagtaattccacaacgggcatgccacacgt 10957489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 14737650 - 14737574
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||| ||||||||||||||| || ||||||||||||||||||||||||    
T  14737650 tgtaacaccccgttacccaaaagcaattaaatagcaaatattcatcagattaattccacaacgggcatgctacacgt 14737574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 33799231 - 33799155
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  33799231 tgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 33799155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 23225573 - 23225500
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  23225573 tgtaacaccccgttacccaaaagcaattaaataacaattatacatcagagtaattccacaacgggcatgctaca 23225500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 37235046 - 37235122
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||| ||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  37235046 tgtaacaccctgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 37235122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 23746692 - 23746770
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccaca-acgggcatgctacacgt 150  Q
    ||||||||||||||||||||| | | |||| |||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  23746692 ttgtaacaccccgttacccaaaagcgattaaataacaaatattcatcagagtaattccacatacgggcatgctgcacgt 23746770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 16888126 - 16888050
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| | | ||||||| |||||||||| |||||| |||||||||||||||||    
T  16888126 tgtaacaccccgttacccaaaagcaattaaaaagcaaatatacatcagagtaattccaccacgggcatgctacacgt 16888050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 13362782 - 13362709
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||| | |||||| |||  |||||||||| |||||||||||||||||||||    
T  13362782 tgtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccacaacgggcatgctaca 13362709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 6587428 - 6587479
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  6587428 ttgtaacaccccgttacccaaaaacaattaaataacaaatattaatcagagt 6587479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 4979632 - 4979708
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||| |||||||||| | |||| | |||  | |||| |||||||||| ||||||||||||||||||||||||    
T  4979632 tgtaacacctcgttacccaaaagcaataaaatagaatatatacatcagagtaattccacaacgggcatgctacacgt 4979708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 27910421 - 27910338
Alignment:
Q  67 tgtgttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||| |||||||||||||||||||| | |||| | |||  |  || ||||||||||| | ||||||||||||||||||||||    
T  27910421 tgtgttatgtaacaccccgttacccaaaagcaataaaatagtatgtaatcatcagagtaatcccacaacgggcatgctacacgt 27910338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 27956840 - 27956757
Alignment:
Q  67 tgtgttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||| |||||||||||||||||||| | |||| | |||  |  || ||||||||||| | ||||||||||||||||||||||    
T  27956840 tgtgttatgtaacaccccgttacccaaaagcaataaaatagtatgtaatcatcagagtaatcccacaacgggcatgctacacgt 27956757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 35540351 - 35540423
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | |||||| ||| | ||||| |||||||||| |||||| |||| |||||||||    
T  35540351 tgtaacaccccgttacccaaaagcaattaaatagc-aatatacatcagagtaattccacgacggacatgctaca 35540423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 41010240 - 41010163
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcat----cagagtatttccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |||||||| |||| ||||| ||||    ||||||||||||| ||||||||||| ||||    
T  41010240 tgtaacaccccgttacccaa-aacaattaaataataaatagtcatacatcagagtatttccaaaacgggcatgccacac 41010163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 4521600 - 4521524
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||  | || | | |||||| | || |||||||||| || |||||||||||||||||||||    
T  4521600 tgtaacaccccgttacccataagcagtaaaataacataaatacatcagagtaatttcacaacgggcatgctacacgt 4521524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 14417383 - 14417308
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |  ||||| |||  ||||||||||||||||| ||| |  ||||||||||||||||    
T  14417383 tgtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 14417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 16267697 - 16267646
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  16267697 ttgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 16267646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 22988965 - 22989036
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcat----cagagtatttccacaacgggcatg 142  Q
    |||||||||||||||||||| |||||||| |||| ||||| ||||    ||||||||||||| ||||||||||    
T  22988965 tgtaacaccccgttacccaa-aacaattaaataataaataatcatacatcagagtatttccaaaacgggcatg 22989036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 23116516 - 23116567
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| |  ||||| ||||||||||| |||||||||    
T  23116516 ttgtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagt 23116567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 41242986 - 41242912
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    ||||||||||||||||||||| | |||||| ||||||  | | ||||||||||  ||||||||| |||||||||||    
T  41242986 ttgtaacaccccgttacccaaaagcaattaaataacatttttacatcagagta-atccacaacgtgcatgctacac 41242912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 7004915 - 7004865
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  7004915 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 7004865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 16258904 - 16258954
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  16258904 tgtaacaccccgttacccaaaagtaattaaataacaattattcatcagagt 16258954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 27345023 - 27345073
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||| |||||| |||| |||||||| |||||||||||| ||||||||    
T  27345023 tgtaacactccgttatccaaaaacaattaaataacaaatattaatcagagt 27345073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 14765060 - 14765137
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccac-aacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||| | ||| || |||  |||||||||| | |||| ||||||||||||||||||    
T  14765060 tgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaaacgggcatgctacacgt 14765137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 29327419 - 29327495
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc--cacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |  ||||| |||  ||||||| ||||||||| |||  || ||||||||||||||||    
T  29327419 tgtaacaccccgttacccaaaagtaattaaatataaaatatttatcagagtaattcatcagaacgggcatgctacac 29327495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 33828640 - 33828712
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| |||| | | ||| || | || |||||||||| || ||||||||||||||||||    
T  33828640 tgtaacaccccgttacccaa-aacagtaaaatagcataaatacatcagagtaatttcacaacgggcatgctaca 33828712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 35033148 - 35033221
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    |||||||||||||||||||| | || | | ||| || | || |||||||||| || ||||||||||||||||||    
T  35033148 tgtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaatttcacaacgggcatgctaca 35033221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 14747323 - 14747271
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||||| |  ||||| ||||||| ||| |||||||||    
T  14747323 tttgtaacaccccgttacccaaaagtaattaaataacaattatacatcagagt 14747271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 21986365 - 21986313
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagta 125  Q
    ||||||||||||||||||||| | |||||| |||  ||||| |||||||||||    
T  21986365 ttgtaacaccccgttacccaaaagcaattaaatattaaataatcatcagagta 21986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 22003573 - 22003521
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagta 125  Q
    ||||||||||||||||||||| | |||||| |||  ||||| |||||||||||    
T  22003573 ttgtaacaccccgttacccaaaagcaattaaatattaaataatcatcagagta 22003521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 40145115 - 40145063
Alignment:
Q  72 tttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||||| |  ||||| |||| || |||||||||||||    
T  40145115 tttgtaacaccccgttacccaaaagtaattaaataataattattcatcagagt 40145063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 31157 - 31081
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  31157 tgtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaacgggcatgctacacgt 31081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 19381 - 19305
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||| ||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  19381 tgtaacaccccgttactcaaaagcaattaaatagcaaatatacatcagagtaattccacaacgggcatgctacacgt 19305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 31182 - 31258
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||| |  ||||||||||||||||    
T  31182 ttgtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattcaccaaacgggcatgctacac 31258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 13085 - 13010
Alignment:
Q  76 taacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccaca-acgggcatgctacacgt 150  Q
    |||||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||| |||||||||||||||||    
T  13085 taacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtaattccacatacgggcatgctacacgt 13010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 16870 - 16795
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| |||||||| ||||||  ||| || ||||||| || |||||||||||||||||||||    
T  16870 tgtaacaccccgttacccaaaaacaattaaataacatttatacaacagagtaatt-cacaacgggcatgctacacgt 16795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2150 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold2150
Description:

Target: scaffold2150; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 858 - 931
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | |||||| ||| ||| ||| |||||||||| ||||||||||| |||||||||    
T  858 ttgtaacaccccgttacccaaaagcaattaaatagcaa-tatacatcagagtaattccacaacggacatgctaca 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 33542 - 33467
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    ||||||||||| ||||||||| |||||||| ||||||  ||| ||||||||||  |||||||||||||||||||||||    
T  33542 ttgtaacaccc-gttacccaaaaacaattaaataacatttatacatcagagta-atccacaacgggcatgctacacgt 33467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 1864 - 1792
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgcta 145  Q
    |||||||||||||||||||| | |||||| |||||||| ||||||||||||| ||| |  |||||||||||||    
T  1864 tgtaacaccccgttacccaaaagcaattaaataacaaacattcatcagagtaattcaccaaacgggcatgcta 1792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 676 - 625
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  676 ttgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagt 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 6204 - 6279
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    |||||||||||| ||||||| |||||||| |||  ||||||||||||||||| ||| |  ||||||||||||||||    
T  6204 tgtaacaccccgctacccaaaaacaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 10994 - 10920
Alignment:
Q  74 tgtaacaccccgttacccaacaa-caattatataacaaatattcatcagagtatttccacaacgggcatgctacac 148  Q
    |||||||||||||||||||| || |||||| ||||||  ||| |||||||||| | ||||||||||||||||||||    
T  10994 tgtaacaccccgttacccaaaaatcaattaaataacatttatacatcagagtaat-ccacaacgggcatgctacac 10920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 200 - 250
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||||||||    
T  200 tgtaacaccccgttacccaaaagcaattaaataacaattattcatcagagt 250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 24659 - 24609
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  24659 tgtaacaccccgttacccaaaagcaattaaataacaaatattaatcagagt 24609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 28107 - 28175
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatg 142  Q
    ||||||||||||||| || | |||||||| ||||||||||  ||||||||||| |||  ||||||||||    
T  28107 tgtaacaccccgttatcccaaaacaattaaataacaaataaacatcagagtatatcccaaacgggcatg 28175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 1336 - 1411
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    |||||||||||||||||||| |  ||||| |||  ||||||||||||||||| ||| |  ||||||||||||||||    
T  1336 tgtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 1411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 57544 - 57477
Alignment:
Q  75 gtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatg 142  Q
    |||||||||||||| || | |||||||| ||||||||||  ||||||||||| |||  ||||||||||    
T  57544 gtaacaccccgttatcccaaaacaattaaataacaaataaacatcagagtatatcccaaacgggcatg 57477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 8536 - 8610
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctaca 147  Q
    |||||||||||||||||||| |||||||  ||| || |||  |||||||||||||| |  |||||||||||||||    
T  8536 tgtaacaccccgttacccaaaaacaatttaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 8610  T

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Target: scaffold0606 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 488 - 414
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctaca 147  Q
    ||||||||||||||||||||| | || | | ||| || | || |||||||||| || ||||||||||||||||||    
T  488 ttgtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaatttcacaacgggcatgctaca 414  T

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Target: scaffold0266 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 14412 - 14458
Alignment:
Q  78 acaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    |||||||||||||||| | |||||| |||||||||||| ||||||||    
T  14412 acaccccgttacccaaaagcaattaaataacaaatattaatcagagt 14458  T

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Target: scaffold0329 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 17387 - 17439
Alignment:
Q  76 taacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc 129  Q
    |||||||||||||||||| |  ||||| |||||||||| |||||||||||||||    
T  17387 taacaccccgttacccaa-agtaattaaataacaaataatcatcagagtatttc 17439  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 23728 - 23797
Alignment:
Q  74 tgtaacaccccgtta-cccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatg 142  Q
    ||||||||||||||| ||||| |||||||| |||||||||   ||||||||||| |||  ||||||||||    
T  23728 tgtaacaccccgttatcccaaaaacaattaaataacaaatccacatcagagtatatcccaaacgggcatg 23797  T

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Target: scaffold0188 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 5494 - 5441
Alignment:
Q  71 ttttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagt 124  Q
    ||||||||||||||| ||||||| |  ||||| |||||||||||| ||||||||    
T  5494 ttttgtaacaccccgatacccaaaagtaattaaataacaaatattaatcagagt 5441  T

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Target: scaffold0023 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 157555 - 157483
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcat----cagagtatttccacaacgggcatg 142  Q
    |||||||||||| |||||||| |||||||| |||| ||||| ||||    ||||||||||||| ||||||||||    
T  157555 ttgtaacaccccattacccaa-aacaattaaataataaataatcatacatcagagtatttccaaaacgggcatg 157483  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 63950 - 64025
Alignment:
Q  74 tgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttccacaacgggcatgctacacgt 150  Q
    |||||||||||||||||||| | |||||| ||||||  ||| ||||||||||  |||||||  |||||| |||||||    
T  63950 tgtaacaccccgttacccaaaagcaattaaataacatttatacatcagagta-atccacaaacggcatgttacacgt 64025  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 252889 - 252965
Alignment:
Q  73 ttgtaacaccccgttacccaacaacaattatataacaaatattcatcagagtatttc-cacaacgggcatgctacac 148  Q
    |||||||||||||| |||||| |  ||||| |||  ||||||||||||||||| ||| |  ||||||||||||||||    
T  252889 ttgtaacaccccgtcacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 252965  T

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