View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14604_low_14 (Length: 206)
Name: NF14604_low_14
Description: NF14604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14604_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 38644734 - 38644912
Alignment:
| Q |
12 |
cacagacaataaccactctcttgttcaaacatacaatttcaccacatacaaacagtgtgattatgatgatgcacaagacaaggacacaatccaatggtca |
111 |
Q |
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| T |
38644734 |
cacagacaataaccactctcttgttcaaacatataatttcaccacatacaaacaatgtgattatgatgatgcacaagacaaggacacaatccaatggtca |
38644833 |
T |
|
| Q |
112 |
tcagttgatccgtccaacactgatatacatccagtcacagtggcagttcctttactgaaagaaggggcaacatatttct |
190 |
Q |
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| T |
38644834 |
tcagttgatccgtccaacactgatatacatccagtcacagtggcagttcctttactgaaagaaggggcaacatatttct |
38644912 |
T |
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