View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14604_low_6 (Length: 368)
Name: NF14604_low_6
Description: NF14604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14604_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 15097213 - 15097551
Alignment:
| Q |
15 |
attttaccatcttgtcccatgaaaagcatgattttttccaggttaagccaaaggagacttatgggcacaattgccattagaagtatgagaaccatccgtt |
114 |
Q |
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| T |
15097213 |
attttaccatcttgtcccatgaaaagcatgattttttcaaggttaagccaaaggagacttatgggcacaattgccattagaagtatgagaaccatccgtt |
15097312 |
T |
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| Q |
115 |
gtagtgaaagggaaagaagttcccaatttttgctaccgaaagcttggctacaaaccggttcgagaccggaggcgaggccgacgagaacagagtaccctgt |
214 |
Q |
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| T |
15097313 |
gtagtgaaagggaaagaagttcccaatttttgctaccgaaagcttggctacaaaccggttcgagaccggaggcgaggccgacgagaacagagtaccctgt |
15097412 |
T |
|
| Q |
215 |
tatgtttgtgaaacctatggacagtgcaccacctgctagctctaagctaccaagacgaccaaggaagagaaccgaaacaacagctctaacaaaaactagc |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
15097413 |
tatgtttgtgaaacctatggacagtgcaccacctgctagctctaagctaccaagacgaccaaggaagagaactgaaacaacagctctaacaaaaactagc |
15097512 |
T |
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| Q |
315 |
atgttcatggctgttaatggtaaagccatgctccaaagt |
353 |
Q |
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| T |
15097513 |
atgttcatggctgttaatggtaaagccatgctccaaagt |
15097551 |
T |
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