View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14605_high_10 (Length: 368)
Name: NF14605_high_10
Description: NF14605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14605_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 15 - 352
Target Start/End: Original strand, 4687901 - 4688239
Alignment:
| Q |
15 |
caaagggtcccatgaaaacattttggaacatctactggtctaaaatcctaattatggtgggtaattagaaagaagaagnnnnnnnngttagcaataaaca |
114 |
Q |
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| T |
4687901 |
caaagggtcccatggaaacattttggaacatctactggtctaaaatcctaattatggtgggtaattagaaagaagaagaaaaaaaatttaacaataaaca |
4688000 |
T |
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| Q |
115 |
ttggaaaactatgatttgtcattttcttaggaatctcgtgaataattctttgattaaaaggtaagagcaccatcaatattaatttc-aacttatgccgcc |
213 |
Q |
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| T |
4688001 |
ttggaaaactatgatttgtcattttcttaggaatctcgtgaataattctttgattaaaaggtaagagcaccatcaatattaatttctaacttatgccgcc |
4688100 |
T |
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| Q |
214 |
aagtttgtgtgcaattacacggaataatgttgacaagtcataaatggtatatcaaatatacatacaattatgtcaagtacaatttcatgttctgtgattg |
313 |
Q |
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| T |
4688101 |
aagtttgtgtgcaattacacggaataatgttgacaagtcataaatggtatatcaaatatacatacaattatgtcaagtacaatttcatgttctgtgattg |
4688200 |
T |
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| Q |
314 |
atattaattattgagtaacccacataatgaacacctaat |
352 |
Q |
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| T |
4688201 |
atattaattattgagtaacccacataatgaacacctaat |
4688239 |
T |
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