View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14605_high_14 (Length: 270)
Name: NF14605_high_14
Description: NF14605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14605_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 5849583 - 5849332
Alignment:
| Q |
1 |
atatgagattgggtcatagccctgaaattgtcatagaacaagacaccttttatgctattcatgcttacgcaccttatgtaaggttcaaagaacactttaa |
100 |
Q |
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| T |
5849583 |
atatgagattgggtcatggccctgaaattgtcatagaacaagataccttttatgttattcatgcttacgcaccttatgtaaggttggaagaatactttaa |
5849484 |
T |
|
| Q |
101 |
agtaaagtttaaggagaacttaaaaggcttacttcaagatacaacactaagaaaagatttgtctaggaggagagctaaatgggcatgctggaagtgtatc |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
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| T |
5849483 |
agtaaagtttaaggagaacttaaaagacttacttcaagatacaacactaagaaaagatttgtctagaaggagagctaaatgggcatgcaggaagtgtatc |
5849384 |
T |
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| Q |
201 |
gaaaatgttttaagggcttgcatgagaagtatggtcttgaggaggtaaatgg |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5849383 |
gaaaatgttttaagggcttgcatgagaagtatggtcttgaggaggtaaatgg |
5849332 |
T |
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