View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14605_low_10 (Length: 377)

Name: NF14605_low_10
Description: NF14605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14605_low_10
NF14605_low_10
[»] chr1 (26 HSPs)
chr1 (228-359)||(49325940-49326072)
chr1 (1-83)||(424352-424434)
chr1 (1-83)||(7995621-7995703)
chr1 (1-83)||(33487091-33487173)
chr1 (1-81)||(32784088-32784168)
chr1 (1-79)||(3232770-3232848)
chr1 (1-83)||(12871599-12871681)
chr1 (1-79)||(14265266-14265344)
chr1 (1-83)||(28678191-28678273)
chr1 (1-79)||(29205267-29205345)
chr1 (1-83)||(42490871-42490953)
chr1 (1-79)||(20411555-20411633)
chr1 (1-83)||(27534677-27534759)
chr1 (1-66)||(37822406-37822471)
chr1 (20-83)||(33939082-33939145)
chr1 (1-67)||(4882420-4882486)
chr1 (164-221)||(49324400-49324457)
chr1 (1-48)||(44517160-44517207)
chr1 (1-79)||(13488597-13488675)
chr1 (21-83)||(18343592-18343654)
chr1 (1-44)||(9298476-9298519)
chr1 (1-68)||(17347592-17347658)
chr1 (1-83)||(45193687-45193769)
chr1 (5-79)||(4871091-4871165)
chr1 (1-83)||(42276335-42276416)
chr1 (5-83)||(45750456-45750534)
[»] chr3 (30 HSPs)
chr3 (1-83)||(49628156-49628239)
chr3 (1-83)||(3456921-3457003)
chr3 (4-83)||(4206583-4206662)
chr3 (1-83)||(31462815-31462897)
chr3 (1-83)||(36691868-36691950)
chr3 (1-83)||(1074962-1075044)
chr3 (1-83)||(11819061-11819143)
chr3 (1-83)||(30156351-30156432)
chr3 (1-79)||(31270308-31270386)
chr3 (1-83)||(13702041-13702123)
chr3 (1-83)||(14585440-14585522)
chr3 (1-83)||(34960927-34961009)
chr3 (1-83)||(48652509-48652591)
chr3 (1-83)||(53155499-53155581)
chr3 (1-77)||(53402614-53402690)
chr3 (1-81)||(54239087-54239167)
chr3 (1-68)||(35174697-35174764)
chr3 (1-79)||(32080823-32080901)
chr3 (1-83)||(48400877-48400959)
chr3 (1-65)||(22484961-22485025)
chr3 (5-83)||(27189467-27189545)
chr3 (1-83)||(36624763-36624845)
chr3 (1-83)||(39610182-39610272)
chr3 (1-67)||(40013341-40013410)
chr3 (1-79)||(19645203-19645281)
chr3 (1-83)||(55090652-55090734)
chr3 (1-81)||(40883937-40884018)
chr3 (1-67)||(24483747-24483813)
chr3 (1-83)||(38527241-38527323)
chr3 (28-78)||(48854889-48854939)
[»] chr8 (25 HSPs)
chr8 (1-83)||(37612631-37612713)
chr8 (1-81)||(41361712-41361792)
chr8 (1-83)||(2025278-2025360)
chr8 (1-79)||(10338891-10338969)
chr8 (1-83)||(24791237-24791319)
chr8 (1-83)||(31407817-31407899)
chr8 (1-64)||(2234539-2234602)
chr8 (1-83)||(10147924-10148007)
chr8 (1-83)||(1810289-1810370)
chr8 (1-83)||(30026949-30027031)
chr8 (1-83)||(39067758-39067840)
chr8 (1-46)||(37128555-37128600)
chr8 (1-64)||(23971163-23971226)
chr8 (1-78)||(9501572-9501650)
chr8 (1-83)||(14600767-14600849)
chr8 (1-77)||(30039401-30039476)
chr8 (1-68)||(1039962-1040029)
chr8 (5-83)||(11161860-11161938)
chr8 (1-67)||(12329620-12329686)
chr8 (1-79)||(31202440-31202518)
chr8 (1-42)||(31308167-31308208)
chr8 (19-83)||(7583851-7583915)
chr8 (1-48)||(7281658-7281705)
chr8 (16-83)||(13576260-13576326)
chr8 (1-83)||(13570795-13570877)
[»] chr4 (43 HSPs)
chr4 (1-81)||(31521962-31522042)
chr4 (1-83)||(43244442-43244524)
chr4 (1-82)||(394335-394416)
chr4 (1-83)||(7060302-7060384)
chr4 (1-83)||(22757072-22757154)
chr4 (1-81)||(51152105-51152185)
chr4 (1-81)||(8712510-8712590)
chr4 (1-68)||(13965553-13965620)
chr4 (1-83)||(478073-478154)
chr4 (1-83)||(24568774-24568856)
chr4 (1-83)||(24825627-24825709)
chr4 (1-83)||(29268838-29268920)
chr4 (1-83)||(44757103-44757185)
chr4 (1-68)||(38944208-38944275)
chr4 (5-81)||(27394810-27394886)
chr4 (1-83)||(6911658-6911740)
chr4 (1-83)||(11210374-11210456)
chr4 (1-79)||(22049466-22049543)
chr4 (1-83)||(24100117-24100199)
chr4 (1-79)||(26674354-26674432)
chr4 (1-79)||(26742524-26742602)
chr4 (1-68)||(7083877-7083944)
chr4 (1-68)||(20399964-20400031)
chr4 (1-83)||(24611860-24611942)
chr4 (1-83)||(25658145-25658227)
chr4 (1-83)||(30202016-30202098)
chr4 (1-47)||(43493348-43493394)
chr4 (1-66)||(7861266-7861331)
chr4 (1-83)||(39837572-39837655)
chr4 (1-81)||(19745369-19745449)
chr4 (1-81)||(19794357-19794437)
chr4 (16-66)||(28837072-28837120)
chr4 (1-83)||(29922812-29922897)
chr4 (1-64)||(50801214-50801277)
chr4 (1-83)||(626609-626690)
chr4 (1-59)||(6881958-6882016)
chr4 (1-83)||(7084184-7084266)
chr4 (1-67)||(12717179-12717244)
chr4 (3-81)||(42197533-42197610)
chr4 (5-78)||(5814330-5814403)
chr4 (1-68)||(45351131-45351200)
chr4 (1-68)||(45360610-45360679)
chr4 (1-37)||(39523433-39523469)
[»] chr7 (34 HSPs)
chr7 (1-80)||(17473784-17473863)
chr7 (1-80)||(17579351-17579430)
chr7 (1-83)||(36579373-36579455)
chr7 (1-83)||(21603441-21603522)
chr7 (1-81)||(9785297-9785377)
chr7 (1-83)||(11832996-11833079)
chr7 (1-79)||(28664973-28665051)
chr7 (1-83)||(42603830-42603912)
chr7 (1-83)||(45457617-45457699)
chr7 (5-83)||(46026094-46026172)
chr7 (1-83)||(48304456-48304538)
chr7 (1-81)||(5684345-5684425)
chr7 (1-81)||(5709395-5709475)
chr7 (1-83)||(21990639-21990722)
chr7 (1-83)||(17509265-17509346)
chr7 (1-83)||(17543868-17543949)
chr7 (7-79)||(10574363-10574435)
chr7 (1-81)||(22747569-22747648)
chr7 (1-67)||(32740746-32740813)
chr7 (1-79)||(1281198-1281276)
chr7 (1-83)||(27535434-27535516)
chr7 (1-79)||(39533036-39533114)
chr7 (1-83)||(45482042-45482124)
chr7 (1-83)||(6667373-6667456)
chr7 (5-67)||(2622586-2622648)
chr7 (1-83)||(42644654-42644736)
chr7 (24-83)||(40761567-40761626)
chr7 (1-48)||(43847083-43847130)
chr7 (1-41)||(10094461-10094501)
chr7 (27-79)||(36719628-36719680)
chr7 (1-40)||(15674673-15674712)
chr7 (1-83)||(41287935-41288018)
chr7 (29-83)||(17221643-17221696)
chr7 (5-79)||(39707272-39707345)
[»] scaffold0312 (1 HSPs)
scaffold0312 (1-83)||(6115-6197)
[»] chr6 (15 HSPs)
chr6 (1-83)||(14783232-14783314)
chr6 (1-83)||(21507869-21507951)
chr6 (1-83)||(15590140-15590222)
chr6 (1-83)||(6419919-6420001)
chr6 (1-83)||(8693718-8693803)
chr6 (1-83)||(12481431-12481513)
chr6 (1-79)||(31937480-31937557)
chr6 (8-77)||(29927447-29927516)
chr6 (19-83)||(4084996-4085060)
chr6 (1-83)||(23654228-23654310)
chr6 (1-77)||(15175797-15175872)
chr6 (1-77)||(15470296-15470371)
chr6 (2-82)||(35219966-35220045)
chr6 (1-83)||(2304871-2304953)
chr6 (1-82)||(19402869-19402950)
[»] chr2 (37 HSPs)
chr2 (1-83)||(5754266-5754348)
chr2 (1-83)||(43474189-43474271)
chr2 (1-83)||(11937919-11938002)
chr2 (1-83)||(12704665-12704747)
chr2 (1-83)||(17268185-17268267)
chr2 (1-79)||(27095687-27095765)
chr2 (1-79)||(44942267-44942345)
chr2 (2-83)||(9690035-9690116)
chr2 (4-83)||(20561196-20561275)
chr2 (1-68)||(34416822-34416889)
chr2 (1-83)||(15919852-15919934)
chr2 (1-83)||(22597113-22597195)
chr2 (1-82)||(13740721-13740801)
chr2 (1-83)||(18089453-18089535)
chr2 (1-83)||(25067830-25067912)
chr2 (1-79)||(33012059-33012137)
chr2 (1-83)||(38384503-38384585)
chr2 (5-83)||(7073013-7073091)
chr2 (1-83)||(9978730-9978812)
chr2 (1-67)||(31908877-31908943)
chr2 (1-83)||(34963127-34963208)
chr2 (1-83)||(36867986-36868068)
chr2 (1-83)||(38535366-38535448)
chr2 (1-66)||(35333500-35333565)
chr2 (19-83)||(32015198-32015262)
chr2 (19-79)||(28261972-28262032)
chr2 (1-48)||(28231158-28231205)
chr2 (1-79)||(4604368-4604446)
chr2 (1-68)||(10287067-10287133)
chr2 (24-79)||(17116490-17116544)
chr2 (5-82)||(4739310-4739385)
chr2 (1-67)||(17767613-17767678)
chr2 (1-68)||(34470957-34471026)
chr2 (1-41)||(4426719-4426759)
chr2 (5-77)||(11798582-11798653)
chr2 (39-83)||(12891188-12891232)
chr2 (1-41)||(32314462-32314502)
[»] chr5 (24 HSPs)
chr5 (1-77)||(17699537-17699613)
chr5 (1-83)||(6281022-6281104)
chr5 (1-83)||(17331306-17331388)
chr5 (1-79)||(27241046-27241124)
chr5 (1-83)||(28040607-28040689)
chr5 (1-83)||(33164529-33164611)
chr5 (1-83)||(43493850-43493932)
chr5 (1-83)||(32347775-32347858)
chr5 (1-83)||(26295119-26295201)
chr5 (22-83)||(7771888-7771949)
chr5 (1-78)||(42609127-42609204)
chr5 (1-81)||(29097769-29097849)
chr5 (1-64)||(12439695-12439757)
chr5 (1-83)||(17096300-17096385)
chr5 (1-78)||(178167-178244)
chr5 (1-83)||(6635227-6635310)
chr5 (1-68)||(34431053-34431120)
chr5 (1-48)||(39179889-39179936)
chr5 (1-79)||(39531464-39531540)
chr5 (1-49)||(3079366-3079414)
chr5 (1-79)||(981086-981164)
chr5 (1-83)||(3740336-3740417)
chr5 (1-82)||(20483165-20483246)
chr5 (1-83)||(23882177-23882259)
[»] scaffold1379 (1 HSPs)
scaffold1379 (1-83)||(1147-1229)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-78)||(35065-35142)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-66)||(74159-74224)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-83)||(2878-2962)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-61)||(7185-7245)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-83)||(404319-404401)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-81)||(2478-2557)
[»] scaffold0121 (1 HSPs)
scaffold0121 (28-83)||(13337-13392)
[»] scaffold0580 (2 HSPs)
scaffold0580 (1-77)||(841-915)
scaffold0580 (1-77)||(8580-8654)


Alignment Details
Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 359
Target Start/End: Original strand, 49325940 - 49326072
Alignment:
Q  228 tttcaaaaaattggagaagaaacttctaacctaggaataatatagcggaaacattgggtggtgcggcgatgtaaccacgaaaaatctcacggctaaa-ca 326  Q
    |||| ||||||||||||||||||| |||||| ||| |||||| |||||  |||||||||||||| |||||| |||||| |  ||||||||||||||| ||    
T  49325940 tttcgaaaaattggagaagaaactcctaaccaagggataatacagcggcgacattgggtggtgcagcgatgcaaccacaacgaatctcacggctaaatca 49326039  T
Q  327 ggggaaggcatgtatctcgcagtggtgatccct 359  Q
    ||||||||| ||||||| ||||| |||||||||    
T  49326040 ggggaaggcgtgtatcttgcagtagtgatccct 49326072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 424352 - 424434
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  424352 aatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 424434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7995621 - 7995703
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||  |||||||||||||    
T  7995621 aatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttgggtcaaaattgaccctaaatcacccctct 7995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33487091 - 33487173
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  33487091 aatcacatattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 33487173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32784168 - 32784088
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||    
T  32784168 aatcacttattcaataaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccct 32784088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3232848 - 3232770
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||  |||||||||    
T  3232848 aatcatttattcaattaggatagaaggaaaaacaattcggaggggtgattttttgatcaaaattgaccctaaatcaccc 3232770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12871681 - 12871599
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||| | ||||||| || ||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  12871681 aatcacttattcgattaggatataatgaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12871599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 14265344 - 14265266
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    ||||||||||| || |||||||||||||||||||  |||||||||||| ||||| |||||||||||||  |||||||||    
T  14265344 aatcacttatttaattaggatagaaggaaaaacagctcggaggggtgatttttttgtcaaaattgaccctaaatcaccc 14265266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28678191 - 28678273
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||||||| ||||||||||||||| | |||| |||| ||||||||||||||  |||||||||||||    
T  28678191 aatcacttattcaattatgatagaacgaaaaacaattcggacgagtgatttttgggtcaaaattgaccctaaatcacccctct 28678273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29205345 - 29205267
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| || ||||||||||||||||||||  |||||||| |||| ||||||||||||||  |||||||||    
T  29205345 aatcacttattcaattatgatagaaggaaaaacaattccaaggggtgatttttgggtcaaaattgaccctaaatcaccc 29205267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42490953 - 42490871
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||| |||| ||||||| ||||||  |||||||| ||||    
T  42490953 aatcacttattcaattaagatagaacgaaaaacaattcggaggggtgatttttaggtcaaacttgaccctaaatcacctctct 42490871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20411633 - 20411555
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| | | ||| || ||||||||||||||| |||||| |||| ||||||||||||||| |||||||||    
T  20411633 aatcacttattcaatttgaataaaaagaaaaacaattcggatgggtgatttttgggtcaaaattgaccataaatcaccc 20411555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27534759 - 27534677
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || | ||||||||||||||| |||||||| ||| |||| ||||||||||||||  |||||| ||||||    
T  27534759 aatcacttattcaattaaggtagaaggaaaaacaaatcggagggatgatttttgggtcaaaattgaccctaaatcatccctct 27534677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37822406 - 37822471
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 66  Q
    |||||||||||||| ||||||||||||||||||||||| || |||| | |||| ||||||||||||    
T  37822406 aatcacttattcaattaggatagaaggaaaaacaattcagaagggtaatttttgggtcaaaattga 37822471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 33939082 - 33939145
Alignment:
Q  20 atagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||| |||||||||||| ||||||||| |||| ||||||||||||||  |||||||||||||    
T  33939082 atagaaagaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 33939145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4882420 - 4882486
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 67  Q
    |||||||||||||| ||||||| || ||||||||| |||||||||||| |||| |||| ||||||||    
T  4882420 aatcacttattcaattaggatataatgaaaaacaaatcggaggggtgatttttgggtcgaaattgac 4882486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 49324400 - 49324457
Alignment:
Q  164 aattgaacttatgattttaatatattttgcatttgttacattgttttattttcataac 221  Q
    |||||||||| ||||||| ||||||||||| ||||||||| ||||| |||||||||||    
T  49324400 aattgaacttgtgattttgatatattttgcgtttgttacactgtttgattttcataac 49324457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44517207 - 44517160
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 48  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||    
T  44517207 aatcacttattgaattaggatagaaggaaaaacaattcggaagggtga 44517160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13488597 - 13488675
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| || | | ||||||||||||| ||||| |||||| |||| ||||||||| ||||  |||||||||    
T  13488597 aatcacttattcaattaaggtggaaggaaaaacaaatcggatgggtgatttttgggtcaaaatcgaccctaaatcaccc 13488675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 18343654 - 18343592
Alignment:
Q  21 tagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||||| |  |||||||||||||    
T  18343654 tagaaggaaaaacaaatcgaaggggtgatttttgggtcaaaattgatcctaaatcacccctct 18343592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9298476 - 9298519
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggg 44  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||    
T  9298476 aatcaattatttaactaggatagaaggaaaaacaactcggaggg 9298519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17347658 - 17347592
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    ||||||||||||   || |||||||| |||||||| ||||| |||||| |||||||||||||||||||    
T  17347658 aatcacttattcctttatgatagaagaaaaaacaactcggatgggtga-tttttggtcaaaattgacc 17347592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 45193687 - 45193769
Alignment:
Q  1 aatcacttattcaactaggatagaagg-aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||| | | || ||| ||||||||||  ||||| |||||||    
T  45193687 aatcacttattcaattaggatagaaggaaaaaacaactcggaggggt-attattgggttaaaattgaccctaaatcgcccctct 45193769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 4871091 - 4871165
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||| ||| ||| ||||||||||||||||||| ||||| || |  ||||||||||| |  |||||||||    
T  4871091 acttattcaattagaataaaaggaaaaacaattcggagtggtgatttatgagtcaaaattgatcttaaatcaccc 4871165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42276416 - 42276335
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||| ||||| || || |||||||| ||||||||||||||||||||| ||||  ||||||| | |||  |||||||||||||    
T  42276416 aatcagttatttaattatgatagaagaaaaaacaattcggaggggtga-ttttgtgtcaaaaataaccctaaatcacccctct 42276335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 45750534 - 45750456
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| ||||||| |||||||||  | |||||  | ||| |||| ||||||||||||||  |||||||||||||    
T  45750534 acttattcaattaggataaaaggaaaaaacaatcggattgatgatttttgggtcaaaattgaccttaaatcacccctct 45750456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 7e-28; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 49628156 - 49628239
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga-ccaaaaatcacccctct 83  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||    
T  49628156 aatcacttattcaactaggatagaaggaaaaacaattcagaggggtgatttttaggtcaaaattgacccaaaaatcacccctct 49628239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3457003 - 3456921
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| |||| | ||||||||||||| |||||||||||||    
T  3457003 aatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgaccataaatcacccctct 3456921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 4206583 - 4206662
Alignment:
Q  4 cacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  4206583 cacttattcaattaggatatatggaaaaacaattcggaggggtgattttttgatcaaaattgaccataaatcacccctct 4206662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31462815 - 31462897
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  31462815 aatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctct 31462897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36691868 - 36691950
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||| || |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  36691868 aatcacttattcaattaggatagaaggaaaaataactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 36691950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1074962 - 1075044
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||| ||| |||||||||||| ||||| |||||| |||| ||||||||||||||| |||||||||||||    
T  1074962 aatcacttattcaattagaatataaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccataaatcacccctct 1075044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11819143 - 11819061
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || | ||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  11819143 aatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 11819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30156351 - 30156432
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  30156351 aatcacttattcaattaggataaaaggaaaa-caattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 30156432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31270386 - 31270308
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||| |||| ||||||||||||||  |||||||||    
T  31270386 aatcacttattcaattaggatagaaggaaaaataattcgaaggggtgatttttgggtcaaaattgaccctaaatcaccc 31270308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13702041 - 13702123
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||||||| |||||| |||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  13702041 aatcacttattcaattatgatagaaagaaaaataattcgaaggggtgacttttgggtcaaaattgaccctaaatcacccctct 13702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14585522 - 14585440
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||||||||  |||| |||| |||| |||||||||||||   |||||||||||||    
T  14585522 aatcacttattcaattaggatagaaggaaaaacaatttagaggagtgatttttgggtcaaaattgactctaaatcacccctct 14585440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 34960927 - 34961009
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||| ||||||| ||||||||||| ||||||||| |||| ||||||||||||||  || ||||||||||    
T  34960927 aatcacttattcaattagaatagaagaaaaaacaattctgaggggtgatttttgggtcaaaattgaccctaagtcacccctct 34961009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48652509 - 48652591
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || | ||||||||||||||| |||||||||||| |||| ||||||| ||||||  |||||||||||||    
T  48652509 aatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaagttgaccctaaatcacccctct 48652591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 53155499 - 53155581
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || ||||||| |||||||||||||||| | |||||| |||| ||||||||||||||  |||||||||||||    
T  53155499 aatcacttattgaattaggatataaggaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatcacccctct 53155581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 53402690 - 53402614
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    ||||||||||| || ||| |||||||||||||||||||||| |||||| |||| ||||||||||||||  |||||||    
T  53402690 aatcacttattgaattagaatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcac 53402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54239087 - 54239167
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| |||||||||||||||||||||||||| | |||| |||||| ||||| || |||  |||||||||||    
T  54239087 aatcacttattcaattaggatagaaggaaaaacaattcggatgtgtgattttttgatcaaatttaaccttaaatcacccct 54239167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35174764 - 35174697
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||| |||| |||| |||||||||    
T  35174764 aatcacttattcaattaggatagaaggaaaaacaattcaaaggggtgatttttgggtcgaaattgacc 35174697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32080823 - 32080901
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||| ||||||| || | ||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||    
T  32080823 aatcacctattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 32080901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48400959 - 48400877
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || |||| |||||||||||||||||| || | |||| |||| ||||||||||||||  |||||||||||||    
T  48400959 aatcacttattaaaatagggtagaaggaaaaacaattccgatgtgtgatttttgggtcaaaattgaccctaaatcacccctct 48400877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22485025 - 22484961
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattg 65  Q
    |||||||||||||| ||||||||||||||||||||| |||| | |||| |||| |||||||||||    
T  22485025 aatcacttattcaattaggatagaaggaaaaacaatccggaagagtgatttttgggtcaaaattg 22484961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 27189467 - 27189545
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| |||||||||||||||||||||||||| | || | |||| | |||||||||||   |||||||||||||    
T  27189467 acttattcaattaggatagaaggaaaaacaattcggaagagtaatttttggatcaaaattgactctaaatcacccctct 27189545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36624763 - 36624845
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| |  |||||||||||||||||||||||||| |||||| |||| |||||  |||||||   ||||||||||||    
T  36624763 aatcacttatttagttaggatagaaggaaaaacaattcggatgggtgatttttgggtcatgattgaccctgaatcacccctct 36624845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 39610272 - 39610182
Alignment:
Q  1 aatcacttattcaactaggatagaaggaa--------aaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||        |||||| |||||||||||| | || ||||||||||||||| |||||||||||||    
T  39610272 aatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattgaccataaatcacccctct 39610182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40013341 - 40013410
Alignment:
Q  1 aatcacttattcaactagga---tagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 67  Q
    |||||||||||||| |||||   ||||||||||||||||||| | |||||| |||| |||||||||||||    
T  40013341 aatcacttattcaattaggaggatagaaggaaaaacaattcgaatgggtgatttttgggtcaaaattgac 40013410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19645281 - 19645203
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    ||||||||||| || ||||| ||||| |||||||||||||| || ||  |||| ||||||||||||||  |||||||||    
T  19645281 aatcacttatttaattaggacagaagaaaaaacaattcggatggatggtttttaggtcaaaattgaccctaaatcaccc 19645203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 55090652 - 55090734
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || || | ||||||||||||||| |||||||||||| |||| |||  ||||| |||  |||||||||||||    
T  55090652 aatcacttatttaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggttgaaattaaccctaaatcacccctct 55090734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40883937 - 40884018
Alignment:
Q  1 aatcacttattcaactaggatagaagg-aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| ||||||| |||| |||||||||||| |  | ||| |||| ||||||||||||||  |||||||||||    
T  40883937 aatcacttattcaattaggataaaaggaaaaaacaattcgaattgatgatttttgggtcaaaattgaccctaaatcacccct 40884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24483747 - 24483813
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 67  Q
    |||||||||||||| || ||||||| |||||||||||| || |||||| || |  ||||||||||||    
T  24483747 aatcacttattcaattatgatagaatgaaaaacaattcagatgggtgatttgtgtgtcaaaattgac 24483813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 38527323 - 38527241
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||| |||||||| || ||||||||||||||||||| ||| | |||| |||| | |||| ||||| |  |||||||||||||    
T  38527323 aatcatttattcaattaagatagaaggaaaaacaatttggatgtgtgatttttggttcaagattgatcctaaatcacccctct 38527241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 48854939 - 48854889
Alignment:
Q  28 aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 78  Q
    |||||||| |||||||||||| |||| ||| |||||||||| |||||||||    
T  48854939 aaaaacaaatcggaggggtgatttttgggttaaaattgacccaaaatcacc 48854889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 37612713 - 37612631
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  37612713 aatcacttattcaactaggatagaaggaaaaaaaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 37612631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41361792 - 41361712
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| || | ||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||    
T  41361792 aatcacttattcaattacggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccataaatcacccct 41361712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2025278 - 2025360
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||| ||| |||||||||||| | ||| |||||| |||||||||||||||||||| |||||||||||||    
T  2025278 aatcacttattcaattagaataaaaggaaaaacaacttggaagggtgattttttggtcaaaattgaccataaatcacccctct 2025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10338891 - 10338969
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||  |||||||||||||  |||||||||    
T  10338891 aatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgcgtcaaaattgaccttaaatcaccc 10338969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24791237 - 24791319
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || ||||||| |||||||||||||||||| || ||| |||| ||||||||||||||| |||||||||||||    
T  24791237 aatcacttattgaattaggatataaggaaaaacaattcggatggatgatttttgggtcaaaattgaccataaatcacccctct 24791319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31407817 - 31407899
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||| ||||||||||| |||||||||||||||||||||||| | ||| |||| ||||||||||||||  |||||||||||||    
T  31407817 aatcatttattcaactatgatagaaggaaaaacaattcggagagatgatttttgggtcaaaattgaccctaaatcacccctct 31407899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2234539 - 2234602
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaatt 64  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||||||||    
T  2234539 aatcacttattcaactaggatagaaggaaaaacaattcgaaggggtgatttttggatcaaaatt 2234602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 10148007 - 10147924
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaa-caattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||| ||||| ||| |||||||||||| | || ||||||||||||||  |||||||||||||    
T  10148007 aatcacttattcaattaggatagaagaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcacccctct 10147924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1810289 - 1810370
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || ||||||||||| ||||| ||| ||||||||||| |||| ||||||||||||||  |||||||||||||    
T  1810289 aatcacttattgaattaggatagaagaaaaaaaaat-cggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 1810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30026949 - 30027031
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || |||||||| |||||||| ||||| |||||| |||| |||||||| |||||  |||||||||||||    
T  30026949 aatcacttattcaattatgatagaagaaaaaacaactcggatgggtgatttttgggtcaaaaatgaccctaaatcacccctct 30027031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39067758 - 39067840
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || |||||||||||||||||||||| |||   |||| |||| ||||||||||||||  |||||||||||||    
T  39067758 aatcacttattaaattaggatagaaggaaaaacaatttggaacagtgatttttgggtcaaaattgaccttaaatcacccctct 39067840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37128555 - 37128600
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggt 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  37128555 aatcacttattcaactaggatagaaggaaaaacaattcggatgggt 37128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23971163 - 23971226
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaatt 64  Q
    |||||||||||||| ||| |||||||||||||||| ||||| | |||| |||||||||||||||    
T  23971163 aatcacttattcaattagaatagaaggaaaaacaactcggatgagtgattttttggtcaaaatt 23971226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9501650 - 9501572
Alignment:
Q  1 aatcacttattcaactaggatagaagga-aaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 78  Q
    |||||||||||||| ||||||||||||| |||||||||| || |||||| |||| | ||||||||||||  ||||||||    
T  9501650 aatcacttattcaattaggatagaaggaaaaaacaattcagatgggtgatttttggatcaaaattgaccctaaatcacc 9501572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14600767 - 14600849
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||| |||||||| ||||||||||| |||||||| ||||| || ||| |||| ||||||||||||||  |||||||| ||||    
T  14600767 aatcagttattcaattaggatagaagaaaaaacaactcggatggatgatttttgggtcaaaattgaccctaaatcacctctct 14600849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30039401 - 30039476
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    |||||| ||||||| ||| | |||||||||||||||||||| | |||| |||| ||||||||||||||| |||||||    
T  30039401 aatcacatattcaattagaaaagaaggaaaaacaattcggatgagtga-ttttgggtcaaaattgaccataaatcac 30039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1039962 - 1040029
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    ||||||||||| || ||| |||||||||||| ||||||||| |||||| |||| | ||||||||||||    
T  1039962 aatcacttattgaattagaatagaaggaaaaccaattcggatgggtgatttttggatcaaaattgacc 1040029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 11161938 - 11161860
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| ||||||| || ||||||||| | | |||||||| |||| ||||||||||||||  |||| ||||||||    
T  11161938 acttattcaattaggatataaagaaaaacaacttgaaggggtgatttttgggtcaaaattgaccctaaattacccctct 11161860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12329686 - 12329620
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 67  Q
    |||||||||||||| ||||||| |||||||||||||||| |  ||||| |||| | |||||||||||    
T  12329686 aatcacttattcaattaggataaaaggaaaaacaattcgaaatggtgatttttggatcaaaattgac 12329620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31202518 - 31202440
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||  |||||| ||||||||||| ||| || ||| |||| ||||||||||||||  |||||||||    
T  31202518 aatcacttattcaattataatagaaagaaaaacaatttggatggatgatttttgggtcaaaattgaccttaaatcaccc 31202440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31308208 - 31308167
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggag 42  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  31308208 aatcacttattcaattaggatagaaggaaaaacaactcggag 31308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 7583851 - 7583915
Alignment:
Q  19 gatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||| |||||||||||| ||||| |||||| |||| |||||||||||| |  |||||||||||||    
T  7583851 gataaaaggaaaaacaactcggatgggtgatttttgggtcaaaattgatcctaaatcacccctct 7583915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7281705 - 7281658
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 48  Q
    |||||||||||||||||| | |||| ||||||||||||||| ||||||    
T  7281705 aatcacttattcaactagaaaagaaagaaaaacaattcggatgggtga 7281658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 13576260 - 13576326
Alignment:
Q  16 taggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| ||||||||| |||||||| ||| |||| |||||||||||| |  |||||||||||||    
T  13576260 taggatagaaagaaaaacaactcggagggatga-ttttaggtcaaaattgatcctaaatcacccctct 13576326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13570795 - 13570877
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || |||||||||| ||||||||||| ||| |  ||| |||| | |||||||||||   |||||||||||||    
T  13570795 aatcacttatttaattaggatagaatgaaaaacaattgggatgaatgatttttagatcaaaattgactctaaatcacccctct 13570877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31522042 - 31521962
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||    
T  31522042 aatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttaggtcaaaattgaccctaaatcacccct 31521962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 43244442 - 43244524
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||  |||||||||||||    
T  43244442 aatcacttattcaattaggatagaaggaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 43244524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 394335 - 394416
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 82  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||    
T  394335 aatcacttattgaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 394416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7060384 - 7060302
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||  |||| ||||||||    
T  7060384 aatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggttaaaattgaccctaaattacccctct 7060302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22757154 - 22757072
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||  |||||||||||||  |||||||||||||    
T  22757154 aatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgagtcaaaattgaccctaaatcacccctct 22757072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 51152185 - 51152105
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||||||  |||||||||||    
T  51152185 aatcacttattaaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaatattgaccntaaatcacccct 51152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8712590 - 8712510
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||  |||||||||||    
T  8712590 aatcacttactcaactaggatagaaggaaaaacaattatgaggggtgatttttgggtcaaaattgaccctaaatcacccct 8712510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13965620 - 13965553
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  13965620 aatcacttattcaattaggatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgacc 13965553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 478073 - 478154
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| ||||||||||||||||||  ||||| |||| ||||||||||||||| |||||||||||||    
T  478073 aatcacttattcaattaggatataaggaaaaacaattcgga-tggtgatttttgggtcaaaattgaccataaatcacccctct 478154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24568774 - 24568856
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||| |||||||| |||||| |||| |||||||||| |||  |||||||||||||    
T  24568774 aatcacttattcaattaggatagaaggaaaaataattcggaagggtgatttttgggtcaaaattcaccctaaatcacccctct 24568856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24825709 - 24825627
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||||| ||||||| |||| |||| |||||||||||| |  |||||||||||||    
T  24825709 aatcacttattcaattaggatagaaggaaaaacaactcggaggagtgatttttaggtcaaaattgatcctaaatcacccctct 24825627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29268838 - 29268920
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||| |||  ||||||||||||||  |||||||||||||    
T  29268838 aatcacttattcaattaggataaaaggaaaaacaactcggaggggtgattttagggtcaaaattgaccttaaatcacccctct 29268920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44757103 - 44757185
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||||| ||| | |||||| |||| ||||||||||||||  |||||||||||||    
T  44757103 aatcacttattcaattaggatagaaggaaaaacaactcgaatgggtgatttttgggtcaaaattgaccttaaatcacccctct 44757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38944208 - 38944275
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| |||| || |||||||||||    
T  38944208 aatcacttattcaactacgatagaaggaaaaacaatttggaggggtgatttttgggccaaaattgacc 38944275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 27394886 - 27394810
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||| ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||  |||||||||||    
T  27394886 acttattcaattaggatagaaggaaaaataatccggaagggtgatttttgggtcaaaattgaccctaaatcacccct 27394810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6911740 - 6911658
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || | ||||||||||||||| |||||| ||||| |||| | ||||||||||||  |||||||||||||    
T  6911740 aatcacttattcaattaaggtagaaggaaaaacaaatcggagaggtgatttttggatcaaaattgaccctaaatcacccctct 6911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 11210374 - 11210456
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||| | |||||||| ||||||||||||||| |||| || |||||||||||  |||||||||||||    
T  11210374 aatcacttattcaattatgatgggaggaaaaataattcggaggggtgatttttagggcaaaattgaccctaaatcacccctct 11210456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22049466 - 22049543
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||| |||| |||||||||| |||  |||||||||    
T  22049466 aatcacttattcaattaggatagaaggaaaaacaattcgaaagggtga-ttttgggtcaaaattaaccctaaatcaccc 22049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24100199 - 24100117
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||||||||||||||||||||||| |||| | |||| | |||||||||| |  |||||||||||||    
T  24100199 aatcacttattcaattacgatagaaggaaaaacaattcggatgggtaatttttggttcaaaattgatcctaaatcacccctct 24100117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26674432 - 26674354
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| || ||||||||||||| ||||| |||||||||| |||| |||||||||||| |  |||||||||    
T  26674432 aatcacttattcaattatgatagaaggaaaagcaatttggaggggtgatttttaggtcaaaattgatcctaaatcaccc 26674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26742524 - 26742602
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| || ||||||| ||||||||||||||| |||||| |||| |||||||||||| |  |||||||||    
T  26742524 aatcacttattcaattaagatagaaagaaaaacaattcggatgggtgatttttgggtcaaaattgatcctaaatcaccc 26742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7083877 - 7083944
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| || ||||||||||||||||||||  |||||||| |||| | ||||||||||||    
T  7083877 aatcacttattcaattatgatagaaggaaaaacaattcataggggtgatttttggatcaaaattgacc 7083944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20399964 - 20400031
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| ||||||||||| |||| ||||||||  |||||| |||| ||||||||||||||    
T  20399964 aatcacttattcaattaggatagaagaaaaagcaattcgggtgggtgatttttgggtcaaaattgacc 20400031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24611860 - 24611942
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||| ||||  | |  ||||||||| |||| |||| |||||||||| |||||||||||||    
T  24611860 aatcacttattcaattaggatagaagggaaaatgacttagaggggtgatttttgggtctaaattgaccataaatcacccctct 24611942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25658227 - 25658145
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || ||||| |||||||||||||||| |||| ||||| ||||  ||||||||| |||  |||||||||||||    
T  25658227 aatcacttattaaattaggaaagaaggaaaaacaatttggagaggtgatttttgagtcaaaattaaccctaaatcacccctct 25658145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30202098 - 30202016
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || |||| |||||||||||| | | |||||||| |||| | ||||||||||||  |||||||||||||    
T  30202098 aatcacttattcaattaagataaaaggaaaaacaactagaaggggtgatttttggatcaaaattgaccttaaatcacccctct 30202016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43493348 - 43493394
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtg 47  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  43493348 aatcacttattcaattaagatagaaggaaaaacaattcggaggggtg 43493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7861266 - 7861331
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 66  Q
    ||||||||||| || ||||||||||||||||| ||||| ||| ||||| |||| ||||||||||||    
T  7861266 aatcacttatttaattaggatagaaggaaaaataattcagagtggtgatttttgggtcaaaattga 7861331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 39837655 - 39837572
Alignment:
Q  1 aatcacttattcaactaggatagaagg-aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| |||| ||||| || ||| |||||||| |||| |||||||||||||   |||||||||||||    
T  39837655 aatcacttattcaattaggataaaagggaaaaaaaaatcgaaggggtgatttttgggtcaaaattgacgctaaatcacccctct 39837572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19745449 - 19745369
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    ||||| |||||||| ||||||| ||| |||||||||||||| |  ||| |||| |||||||||||| |  |||||||||||    
T  19745449 aatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattgatcctaaatcacccct 19745369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19794357 - 19794437
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    ||||| |||||||| ||||||| ||| |||||||||||||| |  ||| |||| |||||||||||| |  |||||||||||    
T  19794357 aatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattgatcctaaatcacccct 19794437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 28837120 - 28837072
Alignment:
Q  16 taggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 66  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||||||||    
T  28837120 taggatagaaggaaaaacaa--cggatgggtgattttttggtcaaaattga 28837072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29922897 - 29922812
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaa---caattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||| ||||||   ||| | |||||||||| | || ||||||||||||||  |||||||| ||||    
T  29922897 aatcacttattcaattaggatagaaagaaaaaaaacaacttggaggggtgattattaggtcaaaattgaccctaaatcacctctct 29922812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 50801277 - 50801214
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaatt 64  Q
    |||||||||||||| ||||||| ||||||||| |||||||||| || | |||| | ||||||||    
T  50801277 aatcacttattcaattaggataaaaggaaaaataattcggaggagttatttttagatcaaaatt 50801214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 626609 - 626690
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || |||||||| ||||| ||||| || |||||| |||| ||||||||||  ||  |||||||||||||    
T  626609 aatcacttattcaattatgatagaag-aaaaataattcagatgggtgatttttgggtcaaaattagccctaaatcacccctct 626690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6882016 - 6881958
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtca 59  Q
    ||||||||||| || ||||||||||||||||| || ||| |||||||| |||| |||||    
T  6882016 aatcacttatttaattaggatagaaggaaaaataactcgaaggggtgatttttgggtca 6881958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7084266 - 7084184
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || | ||||||||||||||| ||||| |  | | |||| |||||||||||| |  |||||||||||||    
T  7084266 aatcacttattcaattaaggtagaaggaaaaacaaatcggaagcataatttttgggtcaaaattgaacctaaatcacccctct 7084184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12717179 - 12717244
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 67  Q
    ||||||||||| || ||||||||||| |||||||| ||||| || ||| |||| |||||||||||||    
T  12717179 aatcacttatttaattaggatagaagaaaaaacaagtcggacggatga-ttttgggtcaaaattgac 12717244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 42197610 - 42197533
Alignment:
Q  3 tcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    ||||||||| || ||||||||||||||||| ||||||||   |||| ||||| ||||||||| |||  |||||||||||    
T  42197610 tcacttattaaattaggatagaaggaaaaataattcgga-aagtgatttttttgtcaaaattaaccctaaatcacccct 42197533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 5814403 - 5814330
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 78  Q
    |||||||||| || ||||||||| ||||||| | |||||| ||| |||| | ||||||||||||  ||||||||    
T  5814403 acttattcaattaagatagaagggaaaacaacttggagggatgatttttggatcaaaattgaccctaaatcacc 5814330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45351131 - 45351200
Alignment:
Q  1 aatcacttattcaact-aggatagaaggaaaa-acaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| | || ||| |||||||| ||||||||||||||||| |||| | ||||||||||||    
T  45351131 aatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtgatttttggatcaaaattgacc 45351200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45360610 - 45360679
Alignment:
Q  1 aatcacttattcaact-aggatagaaggaaaa-acaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| | || ||| |||||||| ||||||||||||||||| |||| | ||||||||||||    
T  45360610 aatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtgatttttggatcaaaattgacc 45360679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39523469 - 39523433
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaatt 37  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  39523469 aatcacttattcaattaggataaaaggaaaaacaatt 39523433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17473784 - 17473863
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccc 80  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  17473784 aatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcacccc 17473863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17579430 - 17579351
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccc 80  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  17579430 aatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcacccc 17579351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36579373 - 36579455
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||  |||||| ||||||    
T  36579373 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgattttcgggtcaaaattgaccctaaatcatccctct 36579455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21603522 - 21603441
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||  |||||||||||||    
T  21603522 aatcacttattcaattaggatagaaggaaaaacaattcagaggggtg-ctttttggtcaaaattgaccctaaatcacccctct 21603441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9785377 - 9785297
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||| |||| ||||||||||||||  |||||||||||    
T  9785377 aatcacttattcaattaagatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccct 9785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11833079 - 11832996
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcgga-ggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||| ||||||    
T  11833079 aatcacttattcaattaggaaagaaggaaaaacaattcggagggggtgatttttgggtcaaaattgaccataaatcatccctct 11832996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28664973 - 28665051
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| |||  ||||||||||||||  |||||||||    
T  28664973 aatcacttattcaattaggatagaaggaaaaacaactcggaggggtgattttagggtcaaaattgaccctaaatcaccc 28665051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42603830 - 42603912
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||| ||||  |||||||||||||| |||||||| ||||    
T  42603830 aatcacttattcaattatgatagaatgaaaaacaattcggaggggtgatttttgagtcaaaattgaccataaatcaccgctct 42603912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 45457617 - 45457699
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||| ||||  |||||||||||||  |||||||||||||    
T  45457617 aatcacttattcaattaagatagaaggaaaaacaattcggaggagtgatttttgcgtcaaaattgaccctaaatcacccctct 45457699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 46026094 - 46026172
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| |||||||||||||||||||||||||| | |||| |||| ||||||||||||||  |||||||||||||    
T  46026094 acttattcaattaggatagaaggaaaaacaattcggatgtgtgatttttgggtcaaaattgaccctaaatcacccctct 46026172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48304456 - 48304538
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||| ||||||| ||||||||| |||||| |||| ||||||||||||||  |||||||||||||    
T  48304456 aatcacttattcaattaggatagcaggaaaagcaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctct 48304538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5684425 - 5684345
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||| ||||  |||||||||||||  |||||||||||    
T  5684425 aatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcacccct 5684345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5709475 - 5709395
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||| ||||  |||||||||||||  |||||||||||    
T  5709475 aatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcacccct 5709395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21990722 - 21990639
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaa-caattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||||| ||||  |||||||||||||  |||||||||||||    
T  21990722 aatcacttattcaattaggatagcaggaaaaaacaattcggaggggtgatttttcagtcaaaattgaccctaaatcacccctct 21990639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17509265 - 17509346
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||  |||||| ||||||    
T  17509265 aatcacttattcaattaggataaaaggaaaaataattcgga-gggtgattttttggtcaaaattgaccctaaatcatccctct 17509346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17543949 - 17543868
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||  |||||| ||||||    
T  17543949 aatcacttattcaattaggataaaaggaaaaataattcgga-gggtgattttttggtcaaaattgaccctaaatcatccctct 17543868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 10574435 - 10574363
Alignment:
Q  7 ttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||||  |||||||||||||  |||||||||    
T  10574435 ttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgagtcaaaattgaccctaaatcaccc 10574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22747569 - 22747648
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| |||||||||||||||| ||| | |||||||||| |||| ||||||||||||||  |||||||||||    
T  22747569 aatcacttattcaattaggatagaaggaaaa-caacttggaggggtgatttttgggtcaaaattgaccctaaatcacccct 22747648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32740813 - 32740746
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtga-gtttttggtcaaaattgac 67  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||  ||||||||||||||||||    
T  32740813 aatcacttattcaattaggatagaaggaaaaacaattcgagggggtgatttttttggtcaaaattgac 32740746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1281198 - 1281276
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||| ||| || ||||||||||||||| |||||| |||||||||||||| ||||  |||||||||    
T  1281198 aatcacttattcaattagaatataatgaaaaacaattcggatgggtgattttttggtcaaaatggaccctaaatcaccc 1281276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27535516 - 27535434
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| ||| ||| |||||||||||||||||||||| |||||| |||| | | ||||||||||  |||||||||||||    
T  27535516 aatcacttatacaattagaatagaaggaaaaacaattcggatgggtgatttttggataaaaattgaccctaaatcacccctct 27535434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 39533036 - 39533114
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| || |||||||||||||||||||| ||| | ||| |||| ||||||||||||||  |||||||||    
T  39533036 aatcacttattcaattaagatagaaggaaaaacaattcagagagatgatttttgggtcaaaattgaccctaaatcaccc 39533114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 45482124 - 45482042
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || |||||||||||||||||||  |||||||||||| |||  ||||||||||||||  ||||||| |||||    
T  45482124 aatcacttatttaattaggatagaaggaaaaacagctcggaggggtgattttggggtcaaaattgaccctaaatcactcctct 45482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6667456 - 6667373
Alignment:
Q  1 aatcacttattcaact-aggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| | || ||||||| ||||||||||||| ||||||| |||| ||||||||||||||  ||||||| |||||    
T  6667456 aatcacttattcaaattagaatagaagaaaaaacaattcggtggggtgatttttgggtcaaaattgaccctaaatcactcctct 6667373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 2622648 - 2622586
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 67  Q
    |||||||||| || ||||||||||||||||||||||| | |||| |||| |||||||||||||    
T  2622648 acttattcaattaagatagaaggaaaaacaattcggatgcgtgatttttgggtcaaaattgac 2622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42644736 - 42644654
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||||||||  | | |||| ||||  ||||||||||| |  |||||||||||||    
T  42644736 aatcacttattcaattaggatagaaggaaaaacaattcaaatgagtgatttttgagtcaaaattgatcctaaatcacccctct 42644654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 40761626 - 40761567
Alignment:
Q  24 aaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||  |||||| ||||||    
T  40761626 aaggaaaaacagttcggaggggtgatttttgggtcaaaattgaccctaaatcatccctct 40761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43847130 - 43847083
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 48  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||    
T  43847130 aatcacttattcaattaggataagaggaaaaacaattcggaggggtga 43847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10094501 - 10094461
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcgga 41  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  10094501 aatcacttattcaattaggataaaaggaaaaacaattcgga 10094461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 36719628 - 36719680
Alignment:
Q  27 gaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||||||||||| |||| | ||||||||||||  |||||||||    
T  36719628 gaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcaccc 36719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15674673 - 15674712
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcgg 40  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  15674673 aatcacttattcaattaggataggaggaaaaacaattcgg 15674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 41288018 - 41287935
Alignment:
Q  1 aatcacttattcaactaggatagaagga-aaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||| ||||||| ||||||||||||| ||||  | ||||| |||||| | || ||||||||||||||  |||||||||||||    
T  41288018 aatcacctattcaattaggatagaaggaaaaaatcactcggatgggtgattattgggtcaaaattgaccctaaatcacccctct 41287935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 17221696 - 17221643
Alignment:
Q  29 aaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| ||||||||| ||||||||||||||| || | |||||||||||||    
T  17221696 aaaacaattcagaggggtga-tttttggtcaaaattcactataaatcacccctct 17221643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 39707345 - 39707272
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    ||||||| || |||||||||| ||||||||| |||||| | ||| |||| ||||||||||||||  |||||||||    
T  39707345 acttatttaattaggatagaaagaaaaacaactcggagtgatga-ttttgggtcaaaattgaccctaaatcaccc 39707272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6197 - 6115
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  6197 aatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 6115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14783232 - 14783314
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||  |||||| ||||||    
T  14783232 aatcacttattcaactaggatagaaggaaaaacaattcggaggcgtgatttttgggtcaaaattgaccctaaatcagccctct 14783314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 21507869 - 21507951
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||  |||||||||||||    
T  21507869 aatcacttattcaactaggatagaaggaaaaacaatttggaggggtgatgtttgggtcaaaattgaccctaaatcacccctct 21507951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15590140 - 15590222
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||  |||||||||||||    
T  15590140 aatcacttattcaattaggatagaagaaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 15590222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6419919 - 6420001
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||| |||| | ||||||||||||  |||||||||||||    
T  6419919 aatcacttattcaattaggatagaaggaaaaacaactcagaggggtgatttttggatcaaaattgaccctaaatcacccctct 6420001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8693718 - 8693803
Alignment:
Q  1 aatcacttattcaactagga---tagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||   ||||||||||||||||||||| |||||| |||| ||||||||||||||  |||||||||||||    
T  8693718 aatcacttattcaattaggaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcacccctct 8693803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12481431 - 12481513
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || | ||||||||||||||| |||||||||||| |||| |||||||||||| |  |||||||||||||    
T  12481431 aatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgatcctaaatcacccctct 12481513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31937480 - 31937557
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| |||||  |||||||||    
T  31937480 aatcacttattcaattaggatagaag-aaaaacaattcggaggggtgatttttgggtcaaaactgaccctaaatcaccc 31937557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 29927447 - 29927516
Alignment:
Q  8 tattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    ||||||| |||||||||||||||||||| | ||||| |||| |||| ||||||||||||||| |||||||    
T  29927447 tattcaattaggatagaaggaaaaacaacttggaggagtgatttttgggtcaaaattgaccataaatcac 29927516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 4085060 - 4084996
Alignment:
Q  19 gatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||||||||||||||| || ||| |||| ||||||||||||||  |||||||||||||    
T  4085060 gatagaaggaaaaacaattcggaaggatgatttttcggtcaaaattgaccctaaatcacccctct 4084996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23654310 - 23654228
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||  || | ||||||||||||||| ||||| |||||| |||| ||||||||||||||  |||||||| ||||    
T  23654310 aatcacttattcagttaaggtagaaggaaaaacaaatcggatgggtgatttttgggtcaaaattgaccctaaatcacctctct 23654228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 15175872 - 15175797
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    ||||||||||| || ||  |||||| |||||||| ||||||||||||| |||| |||||||||||||| ||||||||    
T  15175872 aatcacttatttaagtaaaatagaaagaaaaacatttcggaggggtga-ttttgggtcaaaattgaccgaaaatcac 15175797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15470296 - 15470371
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    ||||||||||| || ||  |||||| |||||||| ||| ||||||||| |||| |||||||||||||||||||||||    
T  15470296 aatcacttatttaagtaaaatagaaagaaaaacatttcagaggggtga-ttttgggtcaaaattgaccaaaaatcac 15470371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 35219966 - 35220045
Alignment:
Q  2 atcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 82  Q
    ||||||||||| | | |||||||||||||| ||| | |||||||||| ||||  |||||||||||||  ||||||||||||    
T  35219966 atcacttattcgattcggatagaaggaaaa-caacttggaggggtgatttttgagtcaaaattgaccctaaatcacccctc 35220045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2304871 - 2304953
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || || |||||| ||||||| || ||||| ||| |||| ||||||||| || |  |||||||||||||    
T  2304871 aatcacttattcaattatgacagaagggaaaacaactcagagggttgatttttgggtcaaaatcgatcctaaatcacccctct 2304953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19402869 - 19402950
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 82  Q
    |||||||| ||||| || |||| |||||||||||| ||  |||||||| |||| | |||||| |||||  ||||||||||||    
T  19402869 aatcacttgttcaattatgatacaaggaaaaacaactcaaaggggtgatttttggatcaaaagtgacccgaaatcacccctc 19402950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5754348 - 5754266
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  |||||||||||||    
T  5754348 aatcatttattcaactaggatagaaggaaaaacaattcggagggatgatttttgggtcaaaattgaccctaaatcacccctct 5754266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 43474189 - 43474271
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||||  |||||||||||||    
T  43474189 aatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctct 43474271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 11937919 - 11938002
Alignment:
Q  1 aatcacttattcaactaggatagaa-ggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  11937919 aatcacttattcaattaggatagaaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 11938002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12704747 - 12704665
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  12704747 aatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12704665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17268185 - 17268267
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||||| ||| |||| ||| |||| ||||||||||||||| |||||||||||||    
T  17268185 aatcacttattcaattaggatagaaggaaaaacaactcgaagggatgatttttgggtcaaaattgaccataaatcacccctct 17268267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27095765 - 27095687
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||    
T  27095765 aatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttaggtcaaaattgaccctaaatcaccc 27095687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44942345 - 44942267
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||| |||| ||||||||||||||| |||||||||    
T  44942345 aatcacttattcaattaggatagaagaaaaaacaactcggaggggtgatttttgggtcaaaattgaccataaatcaccc 44942267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 9690035 - 9690116
Alignment:
Q  2 atcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||  |||||||||||||    
T  9690035 atcacttattcaattaggatagaaggaaaaacagttcggaggggtgatttttgggtcaaatttgaccttaaatcacccctct 9690116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 20561196 - 20561275
Alignment:
Q  4 cacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||| | | ||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  20561196 cacttattcgatttggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 20561275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34416822 - 34416889
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||    
T  34416822 aatcacttattcaattaggatataaggaaaaacaattcggagggatgattttttggtcaaaattgacc 34416889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15919934 - 15919852
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||||||   |||||||||||||    
T  15919934 aatcatttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgactctaaatcacccctct 15919852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22597195 - 22597113
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||| |||| ||||||||||||||  |||||||||||||    
T  22597195 aatcacttatttaattaggatagaaggaaaaacaactcggagggatgatttttgggtcaaaattgaccttaaatcacccctct 22597113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13740721 - 13740801
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 82  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||| |||||| |||||| |||||    
T  13740721 aatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgggtcaaaa-tgaccataaatcatccctc 13740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18089453 - 18089535
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| ||| |||||||||||||||| |||| |||| | ||||||||||||  |||||||||||||    
T  18089453 aatcacttattcaattaggatataagaaaaaacaattcggaggagtgatttttggatcaaaattgaccctaaatcacccctct 18089535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25067912 - 25067830
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||  |||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||| ||||    
T  25067912 aatcacttattcaattaaaatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacctctct 25067830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33012137 - 33012059
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||| |||||||||||||||||||||| | |||| |||| ||||||||||||||  |||||||||    
T  33012137 aatcacttattcaattagaatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcaccc 33012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38384503 - 38384585
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||| || |||||||||||| ||||||  |||| |||| |||||||||||||| ||||||||||||||    
T  38384503 aatcacttattcaattagggtataaggaaaaacaaatcggagatgtgatttttgggtcaaaattgacccaaaatcacccctct 38384585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 7073013 - 7073091
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| |||||||||||||||| ||||||| | ||| || |||| ||||||||||||||  |||||||||||||    
T  7073013 acttattcaattaggatagaaggaaaaccaattcgaaagggcgatttttgggtcaaaattgaccctaaatcacccctct 7073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9978730 - 9978812
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||| |||||||| || |||| |||||||||||||| | |||||||| |||| ||||||||||||||  |||||||||||||    
T  9978730 aatcatttattcaattaagataaaaggaaaaacaatttgaaggggtgatttttgggtcaaaattgaccttaaatcacccctct 9978812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31908877 - 31908943
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 67  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||| |||| | |||||||||||    
T  31908877 aatcacttattcaactaggataaaagaaaaaacaattcggaagggtgatttttggatcaaaattgac 31908943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 34963127 - 34963208
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||| ||||||||||||||| || || |||||| |||| |||||||||||||| ||||| ||||||||    
T  34963127 aatcacttattcaattagggtagaaggaaaaacaaatcaga-gggtgatttttaggtcaaaattgacccaaaattacccctct 34963208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36868068 - 36867986
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||| |||||| || ||| ||||||||||||||||||| ||||||||| ||||  |||||||||||||  |||||||||||||    
T  36868068 aatcgcttattgaattagaatagaaggaaaaacaattcagaggggtgatttttgagtcaaaattgaccctaaatcacccctct 36867986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38535366 - 38535448
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || |||||||||||||| |||||  |||||||  |||| ||||||||||||||  |||||||||||||    
T  38535366 aatcacttattcaattatgatagaaggaaaaaaaattcaaaggggtgctttttgggtcaaaattgaccctaaatcacccctct 38535448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35333565 - 35333500
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 66  Q
    |||||||||||||| |||||||| ||||||||||||||  |||||||| |||| ||||||||||||    
T  35333565 aatcacttattcaattaggatagcaggaaaaacaattcttaggggtgatttttgggtcaaaattga 35333500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 32015262 - 32015198
Alignment:
Q  19 gatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  32015262 gatataaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 32015198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 28261972 - 28262032
Alignment:
Q  19 gatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    ||||||||||||||||||||||| | |||| |||| ||||||||||||||  |||||||||    
T  28261972 gatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcaccc 28262032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28231158 - 28231205
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 48  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  28231158 aatcacttattcaaccaagatagaaggaaaaacaattcggatgggtga 28231205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4604368 - 4604446
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||| |||||||||||||||| ||| | | || | |||| ||||||||||||||  |||||||||    
T  4604368 aatcacttattcaattagaatagaaggaaaaacaactcgaatgagtaatttttgggtcaaaattgaccttaaatcaccc 4604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10287067 - 10287133
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| ||||||| ||| |||  |||||||||||||||| ||||  |||||||||||||    
T  10287067 aatcacttattcaattaggataaaag-aaatgcaattcggaggggtgatttttatgtcaaaattgacc 10287133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 17116490 - 17116544
Alignment:
Q  24 aaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||||||| || ||| |||| ||||||||||||||| |||||||||    
T  17116490 aaggaaaaacaattcggacggatga-ttttaggtcaaaattgaccataaatcaccc 17116544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 4739385 - 4739310
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 82  Q
    ||||||| || |||||| ||||||||||||| |||||||||||| |||  ||||  ||||||||  ||||||||||||    
T  4739385 acttatttaattaggatggaaggaaaaacaactcggaggggtgattttggggtc--aattgaccctaaatcacccctc 4739310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17767613 - 17767678
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 67  Q
    ||||||||||| || ||||||| |||||||||||| ||| |||||||| || | |||||||||||||    
T  17767613 aatcacttatttaattaggatataaggaaaaacaactcgaaggggtga-ttctgggtcaaaattgac 17767678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34471026 - 34470957
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggg--gtgagtttttggtcaaaattgacc 68  Q
    ||||||| |||||| || ||||||| || |||||||||||||||  |||| |||| ||||||||||||||    
T  34471026 aatcactgattcaattaagatagaaagataaacaattcggaggggtgtgatttttgggtcaaaattgacc 34470957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4426719 - 4426759
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcgga 41  Q
    ||||| |||||||| |||||||||||||||||||| |||||    
T  4426719 aatcatttattcaattaggatagaaggaaaaacaaatcgga 4426759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 11798582 - 11798653
Alignment:
Q  5 acttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    ||||||| || ||||||| |||||||| |||   |||||||||| |||| ||||||||||||||| |||||||    
T  11798582 acttatttaattaggatataaggaaaagcaacatggaggggtga-ttttgggtcaaaattgaccataaatcac 11798653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 12891188 - 12891232
Alignment:
Q  39 ggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||    
T  12891188 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12891232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32314502 - 32314462
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcgga 41  Q
    ||||| |||||||| ||||||||||| ||||||||||||||    
T  32314502 aatcatttattcaattaggatagaagaaaaaacaattcgga 32314462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 17699613 - 17699537
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||    
T  17699613 aatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcac 17699537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6281104 - 6281022
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||| ||||||||||||| ||||| ||||||||| |||| ||||||||||||||| |||||||||||||    
T  6281104 aatcacttattcaattagaatagaaggaaaaataattcagaggggtgatttttgggtcaaaattgaccataaatcacccctct 6281022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17331388 - 17331306
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  17331388 aatcacttattcaattaagatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 17331306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27241124 - 27241046
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||||| || |||||||||    
T  27241124 aatcacttattcaattaggataaaaggaaaaacaattcagaggggtgatttttgggtcaaaattgatcataaatcaccc 27241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28040689 - 28040607
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||| |||||||||| ||| |||||||||| |||| ||||||||||||||  |||||||||||||    
T  28040689 aatcacttattcaattaggatataaggaaaaacgatttggaggggtgatttttgggtcaaaattgaccgtaaatcacccctct 28040607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33164529 - 33164611
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || | ||||||||||||||||||||||| |||| ||||  |||||||||||||| |||||||||||||    
T  33164529 aatcacttattcaattaaggtagaaggaaaaacaattcggaggagtgatttttgagtcaaaattgaccataaatcacccctct 33164611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43493932 - 43493850
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||| ||||||||||||||||||||||| ||||| |||| | ||||||||||||  |||||||||||||    
T  43493932 aatcacttattcaattagaatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgaccctaaatcacccctct 43493850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32347775 - 32347858
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaa-caattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||| |||| ||||||| ||||||  |||||||||||||    
T  32347775 aatcacttattcaattaggatagaaggaaaaaacaagtcggaggggtgatttttgggtcaaagttgaccctaaatcacccctct 32347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26295119 - 26295201
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||| |||| | ||||||||||||  |||||||| ||||    
T  26295119 aatcacttattcaataaggatagaaggaaaaacacttcggaggggtgatttttggatcaaaattgaccctaaatcacctctct 26295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 7771888 - 7771949
Alignment:
Q  22 agaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  7771888 agaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 7771949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42609204 - 42609127
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 78  Q
    |||||||||||||| ||||||||||| |||||||||||||| | |||| |||| ||||||||||||||  ||||||||    
T  42609204 aatcacttattcaattaggatagaagaaaaaacaattcggatgagtgatttttaggtcaaaattgaccctaaatcacc 42609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29097849 - 29097769
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||||| || | ||||||||||||||| ||||||||||||  ||| ||||||||||||||  |||||||||||    
T  29097849 aatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatctttgggtcaaaattgaccctaaatcacccct 29097769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12439695 - 12439757
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaatt 64  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||    
T  12439695 aatcacttattcaactaggatagaatgaaaaacaattcgga-gggtgatttttaggtcaaaatt 12439757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17096300 - 17096385
Alignment:
Q  1 aatcacttattcaactaggatagaagg---aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| ||||||||||||   |||||||| | |||||||||| | || ||||||||||||||  |||||||||||||    
T  17096300 aatcacttattcaattaggatagaaggaaaaaaaacaactgggaggggtgattattgggtcaaaattgaccctaaatcacccctct 17096385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 178167 - 178244
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 78  Q
    |||||||||||||| ||||||| ||||||| |||| |||||| ||||| ||||  |||||||||||||  ||||||||    
T  178167 aatcacttattcaattaggatataaggaaacacaactcggagaggtgatttttgagtcaaaattgaccttaaatcacc 178244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6635310 - 6635227
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggag-gggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| || ||||||||||||||||| || ||| |||||| |||| ||||||||||| ||  |||||| ||||||    
T  6635310 aatcacttattcaattatgatagaaggaaaaacaactcagagagggtgatttttgggtcaaaattggccctaaatcatccctct 6635227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34431120 - 34431053
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 68  Q
    |||||||||||||| ||  ||||||| |||||||||||| | |||||| |||| ||||||||||||||    
T  34431120 aatcacttattcaattaaaatagaagaaaaaacaattcgaatgggtgatttttgggtcaaaattgacc 34431053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39179889 - 39179936
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 48  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  39179889 aatcacttattcaattagaatagaaggaaaaataattcggaggggtga 39179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 39531464 - 39531540
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||||||||| || ||||||||| ||||||| |||||||| ||| |||| ||||||||||||||  |||||||||    
T  39531464 aatcacttattcaattacgatagaagg-aaaacaactcggagggatga-ttttgggtcaaaattgaccttaaatcaccc 39531540  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3079366 - 3079414
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgag 49  Q
    |||||||||||||| || |||| |||||||||||| |||||||||||||    
T  3079366 aatcacttattcaattatgatataaggaaaaacaaatcggaggggtgag 3079414  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 981086 - 981164
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 79  Q
    |||||||  ||||| || ||||||||||||||||| ||||||||| || | || |||||||||||| |  |||||||||    
T  981086 aatcactcgttcaattatgatagaaggaaaaacaactcggaggggcgattattgggtcaaaattgatcctaaatcaccc 981164  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3740417 - 3740336
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||| |||||||||| || || ||| ||||  ||||||||| |||  ||||||| |||||    
T  3740417 aatcacttattcaattaggatagaagg-aaaacaattcagatggatgatttttgagtcaaaattaaccctaaatcacacctct 3740336  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20483246 - 20483165
Alignment:
Q  1 aatcacttattcaact-aggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 82  Q
    |||||||||||||| | || ||| |||||||||||||| |||||| ||| |||| |||||||||||| |  ||||||||||||    
T  20483246 aatcacttattcaaattagaataaaaggaaaaacaatttggaggg-tgatttttgggtcaaaattgatcctaaatcacccctc 20483165  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23882177 - 23882259
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| | |||||||| ||||||||||| |||  | ||| ||||   ||||||||||||  |||||||||||||    
T  23882177 aatcacttattcaatttggatagaaagaaaaacaatttggattgatgatttttgaatcaaaattgaccctaaatcacccctct 23882259  T

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Target: scaffold1379 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1147 - 1229
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||| ||||||||||||||||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  1147 aatcacttattcaattagggtagaaggaaaaacaattcgcaggggtgatttttgggtcaaaattgaccttaaatcacccctct 1229  T

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Target: scaffold0155 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35142 - 35065
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 78  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||||| |||| ||||||||||||||  ||||||||    
T  35142 aatcacttattcaattaggatagaaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccctaaatcacc 35065  T

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Target: scaffold0056 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 74224 - 74159
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 66  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  74224 aatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattga 74159  T

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Target: scaffold0536 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 2962 - 2878
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaa--caattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||||||||||||  ||| |||||||||||| | || ||||||||||||||  |||||||||||||    
T  2962 aatcacttattcaattaggatagaaggaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcacccctct 2878  T

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Target: scaffold0321 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7185 - 7245
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaa 61  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||    
T  7185 aatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgggtcaaa 7245  T

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Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 404319 - 404401
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    |||||||||||||| |||||||| | ||||||| ||||||| |||||| |||| | ||||||||||||  ||||| |||||||    
T  404319 aatcacttattcaattaggatagcaagaaaaactattcggatgggtgatttttggatcaaaattgaccttaaatcgcccctct 404401  T

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Target: scaffold0432 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2478 - 2557
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 81  Q
    |||||||||||| | || ||||||||||||||||| || || |||||| |||| |||||||| |||||  |||||||||||    
T  2478 aatcacttattcgattatgatagaaggaaaaacaactcaga-gggtgatttttgggtcaaaaatgaccctaaatcacccct 2557  T

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Target: scaffold0121 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 13337 - 13392
Alignment:
Q  28 aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 83  Q
    ||||||||||||||||||||| |||| | ||||||||||||  |||||||| ||||    
T  13337 aaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcacctctct 13392  T

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Target: scaffold0580 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 841 - 915
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    ||||||||||| || ||  |||||| |||||||| ||||||||| ||| ||||  ||||||||||||||||||||||    
T  841 aatcacttatttaagtaaaatagaaagaaaaacatttcggaggg-tga-ttttgagtcaaaattgaccaaaaatcac 915  T

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Target: scaffold0580; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8580 - 8654
Alignment:
Q  1 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 77  Q
    ||||||||||| || ||  |||||| |||||||| ||||||||| ||| ||||  ||||||||||||||||||||||    
T  8580 aatcacttatttaagtaaaatagaaagaaaaacatttcggaggg-tga-ttttgagtcaaaattgaccaaaaatcac 8654  T

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