View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14606_high_14 (Length: 324)

Name: NF14606_high_14
Description: NF14606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14606_high_14
NF14606_high_14
[»] chr7 (25 HSPs)
chr7 (1-280)||(18873141-18873420)
chr7 (1-275)||(15167956-15168230)
chr7 (1-271)||(10895795-10896065)
chr7 (1-279)||(14422766-14423043)
chr7 (2-286)||(12709833-12710117)
chr7 (2-286)||(13122904-13123188)
chr7 (1-275)||(16009359-16009631)
chr7 (2-286)||(13743492-13743774)
chr7 (67-286)||(12590633-12590850)
chr7 (67-286)||(13007281-13007497)
chr7 (79-273)||(16677152-16677348)
chr7 (79-273)||(17651388-17651584)
chr7 (220-312)||(21230923-21231015)
chr7 (220-299)||(20311026-20311107)
chr7 (220-275)||(11382871-11382926)
chr7 (220-275)||(11389348-11389403)
chr7 (220-312)||(148619-148711)
chr7 (156-275)||(13679428-13679548)
chr7 (221-276)||(2971254-2971309)
chr7 (221-276)||(20906461-20906516)
chr7 (221-275)||(11311059-11311113)
chr7 (240-281)||(831628-831669)
chr7 (240-281)||(1196808-1196849)
chr7 (240-281)||(34958578-34958619)
chr7 (219-275)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (1-280)||(22750922-22751201)
chr5 (1-312)||(38144500-38144809)
chr5 (1-275)||(28370055-28370327)
chr5 (1-275)||(19512168-19512441)
chr5 (67-280)||(23528479-23528690)
chr5 (220-299)||(22438723-22438803)
chr5 (220-312)||(42961566-42961658)
chr5 (211-275)||(18407944-18408008)
chr5 (211-275)||(23111200-23111264)
chr5 (260-312)||(1856445-1856497)
chr5 (260-312)||(21674415-21674467)
chr5 (221-276)||(19236900-19236955)
chr5 (161-287)||(34830024-34830150)
chr5 (223-276)||(22461158-22461211)
chr5 (223-276)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (1-275)||(14762758-14763032)
chr3 (1-273)||(38310802-38311074)
chr3 (1-273)||(20247791-20248055)
chr3 (9-273)||(24192744-24193009)
chr3 (1-275)||(9534110-9534382)
chr3 (1-276)||(23370505-23370779)
chr3 (9-273)||(55499104-55499368)
chr3 (2-276)||(24933828-24934100)
chr3 (107-299)||(16801444-16801635)
chr3 (67-286)||(41455087-41455304)
chr3 (214-275)||(18929239-18929300)
chr3 (211-275)||(17240513-17240577)
chr3 (260-312)||(24122221-24122273)
chr3 (260-312)||(13967762-13967814)
chr3 (260-312)||(13973237-13973289)
chr3 (16-276)||(10389443-10389702)
chr3 (221-276)||(13302240-13302295)
chr3 (221-276)||(13323787-13323842)
chr3 (162-276)||(10414532-10414646)
chr3 (162-276)||(10421202-10421316)
chr3 (221-276)||(12033444-12033499)
chr3 (221-276)||(13312896-13312951)
chr3 (221-276)||(17131732-17131787)
chr3 (221-276)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-292)||(11834-12125)
scaffold0026 (1-276)||(111468-111741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-283)||(960-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-283)||(49961-50241)
[»] chr4 (13 HSPs)
chr4 (2-286)||(8045822-8046105)
chr4 (1-286)||(11847888-11848179)
chr4 (87-276)||(53483573-53483760)
chr4 (220-312)||(15408139-15408231)
chr4 (86-276)||(27906130-27906321)
chr4 (219-275)||(8834895-8834951)
chr4 (219-275)||(13888641-13888697)
chr4 (192-273)||(14486632-14486713)
chr4 (219-275)||(15245215-15245271)
chr4 (219-270)||(22724691-22724742)
chr4 (261-312)||(43284008-43284059)
chr4 (240-281)||(15747551-15747592)
chr4 (219-275)||(15308120-15308176)
[»] chr6 (24 HSPs)
chr6 (42-275)||(23057760-23057993)
chr6 (1-286)||(29614136-29614421)
chr6 (1-275)||(23838980-23839253)
chr6 (15-312)||(18800233-18800529)
chr6 (1-286)||(10986170-10986454)
chr6 (1-275)||(4477639-4477912)
chr6 (9-273)||(21565214-21565477)
chr6 (141-286)||(930085-930229)
chr6 (67-286)||(12168212-12168428)
chr6 (67-286)||(19287121-19287337)
chr6 (67-286)||(19785859-19786075)
chr6 (67-286)||(19878305-19878521)
chr6 (67-286)||(19884081-19884297)
chr6 (87-276)||(34639986-34640173)
chr6 (87-276)||(34646660-34646847)
chr6 (220-312)||(24512807-24512899)
chr6 (162-276)||(25469704-25469816)
chr6 (79-275)||(9187352-9187550)
chr6 (219-275)||(25397172-25397228)
chr6 (219-275)||(19471335-19471391)
chr6 (219-275)||(25348486-25348542)
chr6 (192-276)||(31252394-31252478)
chr6 (219-273)||(25598643-25598697)
chr6 (261-312)||(933615-933666)
[»] chr8 (17 HSPs)
chr8 (1-273)||(8727735-8728007)
chr8 (1-276)||(44477405-44477678)
chr8 (1-276)||(44492563-44492836)
chr8 (2-286)||(23866396-23866680)
chr8 (1-312)||(27940815-27941127)
chr8 (67-286)||(17054440-17054656)
chr8 (166-275)||(18614217-18614327)
chr8 (220-312)||(14056527-14056619)
chr8 (211-275)||(23482053-23482117)
chr8 (220-308)||(25111976-25112064)
chr8 (260-312)||(30765873-30765925)
chr8 (219-275)||(39364919-39364975)
chr8 (221-275)||(29643386-29643440)
chr8 (221-276)||(24320670-24320725)
chr8 (251-311)||(21325730-21325791)
chr8 (252-311)||(21321132-21321192)
chr8 (219-275)||(21931696-21931752)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-286)||(740-1025)
[»] chr2 (19 HSPs)
chr2 (1-275)||(19661454-19661726)
chr2 (1-275)||(6483500-6483772)
chr2 (1-275)||(6486967-6487239)
chr2 (9-286)||(26583617-26583892)
chr2 (9-273)||(23089057-23089320)
chr2 (9-273)||(23878798-23879060)
chr2 (15-275)||(23101463-23101722)
chr2 (162-276)||(5706023-5706137)
chr2 (261-312)||(6260135-6260186)
chr2 (211-275)||(23265133-23265197)
chr2 (211-275)||(23280201-23280265)
chr2 (214-275)||(21908353-21908414)
chr2 (268-312)||(19665037-19665081)
chr2 (219-275)||(24661576-24661632)
chr2 (221-276)||(10577-10632)
chr2 (95-286)||(23168288-23168483)
chr2 (95-286)||(23579545-23579740)
chr2 (221-276)||(25180929-25180984)
chr2 (204-285)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-273)||(14398-14670)
[»] scaffold0029 (2 HSPs)
scaffold0029 (67-286)||(111728-111948)
scaffold0029 (1-46)||(111682-111727)
[»] chr1 (12 HSPs)
chr1 (1-275)||(20437024-20437297)
chr1 (67-286)||(41111884-41112100)
chr1 (211-275)||(32651563-32651627)
chr1 (220-275)||(19663517-19663572)
chr1 (211-275)||(18712790-18712854)
chr1 (219-275)||(20805320-20805376)
chr1 (220-275)||(11158093-11158148)
chr1 (219-273)||(10811785-10811839)
chr1 (221-276)||(20851132-20851187)
chr1 (221-276)||(20857759-20857814)
chr1 (221-276)||(21706276-21706331)
chr1 (221-276)||(21710818-21710873)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-312)||(11131-11433)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-276)||(10195-10469)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-276)||(1525-1799)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-312)||(17950-18261)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-286)||(1887-2171)
scaffold0117 (1-286)||(8564-8848)
[»] scaffold0058 (1 HSPs)
scaffold0058 (2-286)||(75-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (79-312)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (9-273)||(3295-3559)
[»] scaffold0077 (1 HSPs)
scaffold0077 (15-273)||(3624-3881)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-116)||(3443-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (85-281)||(1727-1920)
scaffold0796 (85-281)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (193-280)||(904-991)
scaffold0456 (193-280)||(8049-8136)
scaffold0456 (36-132)||(806-901)
scaffold0456 (36-132)||(7951-8046)
[»] scaffold0107 (1 HSPs)
scaffold0107 (220-312)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (164-282)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (220-309)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (222-312)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (220-299)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (211-275)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (211-275)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (220-275)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (211-275)||(8-72)
[»] scaffold0249 (1 HSPs)
scaffold0249 (268-312)||(2212-2256)
[»] scaffold0146 (1 HSPs)
scaffold0146 (211-275)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (211-275)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (224-286)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (86-286)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (187-286)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (192-276)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (156-275)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (219-275)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (220-275)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (254-287)||(5487-5520)
[»] scaffold0001 (1 HSPs)
scaffold0001 (204-285)||(493019-493099)
[»] scaffold0348 (2 HSPs)
scaffold0348 (261-309)||(14620-14668)
scaffold0348 (221-276)||(9336-9391)
[»] scaffold0096 (1 HSPs)
scaffold0096 (219-279)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (86-273)||(73149-73337)
[»] scaffold0127 (1 HSPs)
scaffold0127 (221-276)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (221-276)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (221-275)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (192-276)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (219-275)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 18873141 - 18873420
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  18873141 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 18873240  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873241 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 18873340  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873341 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 15167956 - 15168230
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  15167956 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 15168055  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168056 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 15168155  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168156 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 10896065 - 10895795
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  10896065 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 10895966  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  10895965 taagttttcattctgaacattatattacaagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttc 10895867  T
Q  201 c-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttac 271  Q
    | ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  10895866 caaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 14422766 - 14423043
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| ||||||    
T  14422766 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagat 14422864  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  14422865 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 14422963  T
Q  201 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 279  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14422964 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 286
Target Start/End: Complemental strand, 12710117 - 12709833
Alignment:
Q  2 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| ||||    
T  12710117 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agat 12710019  T
Q  101 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 199  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  12710018 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 12709919  T
Q  200 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12709918 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 286
Target Start/End: Complemental strand, 13123188 - 13122904
Alignment:
Q  2 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| ||||    
T  13123188 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agat 13123090  T
Q  101 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 199  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  13123089 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 13122990  T
Q  200 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13122989 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 16009359 - 16009631
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||  ||||||    
T  16009359 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcagtttatgatcacaacaacagtatagat 16009457  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||| ||||||||||||    
T  16009458 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttc 16009556  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16009557 caaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 2 - 286
Target Start/End: Original strand, 13743492 - 13743774
Alignment:
Q  2 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 101  Q
    ||||||| |||  ||| |||||||| |||||   ||||||||||| |||||| |   ||||||| |||| ||||||||||||||||||| ||||||||||    
T  13743492 caacaatcacatatcactccaccattatacaattattcatcaatttatccaaccaagcataatt-tcaaccaatttatgatcacagcaataacatagatt 13743590  T
Q  102 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 201  Q
    |||| |||| ||||||||  ||| ||||| | |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||    
T  13743591 aagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttcc 13743690  T
Q  202 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13743691 aaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 67 - 286
Target Start/End: Complemental strand, 12590850 - 12590633
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12590850 tcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcag 12590753  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12590752 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12590654  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  12590653 ccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 13007281 - 13007497
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  13007281 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 13007377  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13007378 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 13007476  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  13007477 ccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 79 - 273
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  79 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 178  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  179 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 79 - 273
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  79 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 178  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  179 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 220 - 312
Target Start/End: Complemental strand, 21231015 - 21230923
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 21230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 20311107 - 20311026
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag--ttttgcagaatgattacacagca 299  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  |||||||||| |||| |||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagca 20311026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 148619 - 148711
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||  ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatcagttccta 148711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 275
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  156 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 254  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  255 gatagtctcacccttacctta 275  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  240 ttatgattatcgagagatagtctcacccttaccttagttttg 281  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  240 ttatgattatcgagagatagtctcacccttaccttagttttg 281  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  240 ttatgattatcgagagatagtctcacccttaccttagttttg 281  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||| ||||||||| ||||| || || ||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 22750922 - 22751201
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  22750922 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 22751021  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751022 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 22751121  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22751122 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 38144809 - 38144500
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  ||||||    
T  38144809 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagat 38144711  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||    
T  38144710 taagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttc 38144612  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcac 300  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144611 caaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcac 38144512  T
Q  301 aatcggttccta 312  Q
    ||||||||||||    
T  38144511 aatcggttccta 38144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 28370327 - 28370055
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  28370327 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 28370229  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  28370228 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 28370130  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28370129 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 19512168 - 19512441
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  19512168 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 19512266  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| |||||||  |||||| |||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  19512267 taagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttc 19512365  T
Q  201 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19512366 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 67 - 280
Target Start/End: Original strand, 23528479 - 23528690
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  23528479 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcag 23528576  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  266 ccttaccttagtttt 280  Q
    |||||||||||||||    
T  23528676 ccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 22438803 - 22438723
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 299  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 22438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 42961566 - 42961658
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||| ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 42961658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 1856497 - 1856445
Alignment:
Q  260 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 1856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 21674467 - 21674415
Alignment:
Q  260 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 21674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 34830024 - 34830150
Alignment:
Q  161 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatag 259  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  ||||| || |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataa 34830122  T
Q  260 tctcacccttaccttagttttgcagaat 287  Q
    || ||||||||||||||  |||||||||    
T  34830123 tcccacccttaccttagaattgcagaat 34830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  223 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  223 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 14763032 - 14762758
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  14763032 acaacaattacagatcactccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 14762933  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762932 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 14762833  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762832 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 38311074 - 38310802
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  38311074 acaacaattacagatcattccaccttcatacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 38310975  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310974 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 38310875  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310874 caaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 20248055 - 20247791
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||        ||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  20248055 acaacaattacagatcattccaccatcatacacaaattcatc--------caatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 20247964  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247963 taagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 20247864  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20247863 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 9 - 273
Target Start/End: Original strand, 24192744 - 24193009
Alignment:
Q  9 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgat-cacagcaacaacatagattaagttt 107  Q
    ||||| |||||||||||||||||  | ||||||||||| ||||||||  ||||| || ||||||| |||||||| |||||||||| ||||||||||||||    
T  24192744 tacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattt-tcaatcagtttatgattcacagcaacagcatagattaagttt 24192842  T
Q  108 tcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaac 206  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24192843 tcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaac 24192942  T
Q  207 tatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24192943 tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 9534110 - 9534382
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||  |||||  ||||||    
T  9534110 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacgacaacagtatagat 9534208  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| | || |||||||||||||||||||||||||||||||||| |||    
T  9534209 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttc 9534307  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9534308 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 23370779 - 23370505
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  23370779 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 23370681  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  23370680 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 23370582  T
Q  201 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  23370581 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 273
Target Start/End: Complemental strand, 55499368 - 55499104
Alignment:
Q  9 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 108  Q
    ||||| |||||||||||||||||| || || ||||||||||||||||  | ||| || |||||||||||||||||||||||||   |||||||||| |||    
T  55499368 tacagatcattccaccatcatacaaaacttgatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaactgtatagattaagattt 55499270  T
Q  109 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaact 207  Q
    ||||| |||||| | ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   |    
T  55499269 cattccgaacatcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggtt 55499172  T
Q  208 atgcaattaggtcaatttt-cagaaattatagattat-gattatcgagagatagtctcacccttacct 273  Q
    | ||| ||||||||||||| | ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  55499171 aagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 2 - 276
Target Start/End: Complemental strand, 24934100 - 24933828
Alignment:
Q  2 caacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaacaacataga 99  Q
    ||||||||||||  |||||| ||||||||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  |||||||||||| ||    
T  24934100 caacaattacagaatcattctaccatcatacaaatattcatcaattcatacaatacatcaaaaat-tcaatcaattaatggattgcagcaacaacatgga 24934002  T
Q  100 ttaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 199  Q
    ||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||   |||  |||| ||    
T  24934001 ttaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattatttt 24933904  T
Q  200 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24933903 ccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 107 - 299
Target Start/End: Complemental strand, 16801635 - 16801444
Alignment:
Q  107 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 205  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  206 ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagca 299  Q
    ||| ||||| |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 286
Target Start/End: Complemental strand, 41455304 - 41455087
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || |||||||| | || ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  41455304 tcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcag 41455207  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    |||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41455206 aatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41455108  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  41455107 ccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  214 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 24122273 - 24122221
Alignment:
Q  260 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 13967814 - 13967762
Alignment:
Q  260 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 13973289 - 13973237
Alignment:
Q  260 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 10389702 - 10389443
Alignment:
Q  16 cattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaacaacatagattaagttttcattct 114  Q
    ||||| |||| |||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  |||||||||||| | ||||| |||||||||    
T  10389702 cattctaccaacatacaaatattcatcaattcatacaattcatcaaaaat-tcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10389604  T
Q  115 gaacattatattacaacagaat-taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaa 213  Q
     ||| ||| ||| | | | ||  |||||| ||  |||||||||  || |||||||||||||||||||||||   |||  ||||  |  |||||||| |||    
T  10389603 taacgttaaattccgagaaaaactaacatcatctttacccatt--ccatcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaa 10389506  T
Q  214 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    |||| | | ||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  10389505 ttagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  162 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 261  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  262 tcacccttaccttag 276  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  162 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 261  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  262 tcacccttaccttag 276  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    |||||||| |||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 240; Significance: 1e-133; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 12125 - 11834
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||| ||||    
T  12125 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagat 12026  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  12025 taagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttc 11926  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgatta 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  11925 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagatta 11834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 111468 - 111741
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  111468 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 111566  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||    
T  111567 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttc 111665  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111666 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 960 - 1240
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||    
T  960 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agat 1058  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  1059 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttc 1158  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 283  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1159 caaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 49961 - 50241
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||    
T  49961 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agat 50059  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  50060 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttc 50159  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 283  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50160 caaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 2 - 286
Target Start/End: Complemental strand, 8046105 - 8045822
Alignment:
Q  2 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||  ||||    
T  8046105 caacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggatt 8046006  T
Q  102 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 201  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||  || ||||||||||||||||||||||| ||||    
T  8046005 aagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttcc 8045906  T
Q  202 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8045905 aaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 11847888 - 11848179
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  11847888 acaacaattacagatcattccatcatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagat 11847987  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------ttt 194  Q
    ||||||||||||||||||||||||||| || || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      ||     
T  11847988 taagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgatttta 11848087  T
Q  195 atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11848088 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  87 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 186  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  187 ctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
     ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 15408139 - 15408231
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| |||| ||||| | ||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttccta 15408231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 276
Target Start/End: Original strand, 27906130 - 27906321
Alignment:
Q  86 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 185  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||     
T  27906130 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaat 27906229  T
Q  186 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
     |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| || || ||||| || |||||||| |||||    
T  27906230 tctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 273
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  192 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 270  Q
    |||||||||||||||| || | ||| ||||| ||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 43284059 - 43284008
Alignment:
Q  261 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||| ||||||||| |||| ||||||  ||||||||||||    
T  43284059 ctcacccttaccttagatttgcagaaagattgcacagcgaaatcggttccta 43284008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  240 ttatgattatcgagagatagtctcacccttaccttagttttg 281  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 42 - 275
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  42 caattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaaca 141  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  142 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 241  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  242 atgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 29614421 - 29614136
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    |||||| |||||| | |||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||||||||| ||||    
T  29614421 acaacacttacagattattccaccatcatacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagat 29614322  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattta-tctt 199  Q
    |||||||||||||| ||||||  | ||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||    
T  29614321 taagttttcattctaaacatt-caatacaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttattttt 29614223  T
Q  200 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29614222 ccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 23838980 - 23839253
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  23838980 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 23839078  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  23839079 taagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttc 23839177  T
Q  201 caaa-actatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23839178 caaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 18800233 - 18800529
Alignment:
Q  15 tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattct 114  Q
    |||||||||||||||||  || |||||||||||||||||||  | ||| || ||||||||||| |||||||| |||||| |||||||||| ||||||| |    
T  18800233 tcattccaccatcataccaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacaacaacaatatagattaagatttcatttt 18800331  T
Q  115 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaa 213  Q
    |||||| | |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  18800332 gaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaa 18800430  T
Q  214 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  18800431 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttccta 18800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 10986454 - 10986170
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  ||||||    
T  10986454 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagat 10986356  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  10986355 taagttttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttc 10986257  T
Q  201 c-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  10986256 caaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 4477639 - 4477912
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| ||| |||||||||||||| |  || ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||| ||||||    
T  4477639 acaacaaatacagatcactccaccatcatacaaatctttatcaaatcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagat 4477737  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  4477738 taagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 4477836  T
Q  201 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4477837 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 273
Target Start/End: Complemental strand, 21565477 - 21565214
Alignment:
Q  9 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 108  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||    
T  21565477 tacagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagattt 21565379  T
Q  109 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaact 207  Q
    ||||| |||| | | ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   |    
T  21565378 cattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggtt 21565281  T
Q  208 atgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 273  Q
    | |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  21565280 aagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 141 - 286
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  141 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 240  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  241 tatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 12168212 - 12168428
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12168212 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 12168308  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12168309 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12168407  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  12168408 ccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 19287121 - 19287337
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19287121 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19287217  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19287218 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19287316  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  19287317 ccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 67 - 286
Target Start/End: Complemental strand, 19786075 - 19785859
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19786075 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19785979  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19785978 aatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19785880  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  19785879 ccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 19878305 - 19878521
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19878305 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19878401  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19878402 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19878500  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  19878501 ccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 19884081 - 19884297
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19884081 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19884177  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19884178 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19884276  T
Q  266 ccttaccttagttttgcagaa 286  Q
    ||| |||||||||||||||||    
T  19884277 cctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  87 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 186  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  187 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
     ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 276
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  87 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 186  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  187 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
     ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 220 - 312
Target Start/End: Complemental strand, 24512899 - 24512807
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttccta 24512807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  162 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 261  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  262 tcacccttaccttag 276  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 275
Target Start/End: Original strand, 9187352 - 9187550
Alignment:
Q  79 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 178  Q
    |||||||| |||||  ||||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| |||| ||||| ||||||     
T  9187352 tgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaa- 9187450  T
Q  179 ccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  9187451 ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  192 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||  | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    |||||||||||||| |||| |||||||| || ||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 933666 - 933615
Alignment:
Q  261 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||| ||||||||| |||| || |||| ||||||||||||    
T  933666 ctcacccttaccttagatttgcagaaagattgcatagcaaaatcggttccta 933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 8728007 - 8727735
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||  ||||||    
T  8728007 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagat 8727908  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||||||||||    
T  8727907 taagttttcattctgaacattacattacaacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttc 8727809  T
Q  201 c-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  8727808 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 44477405 - 44477678
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  44477405 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 44477503  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  44477504 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 44477602  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44477603 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 44492563 - 44492836
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  44492563 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 44492661  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  44492662 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 44492760  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44492761 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 286
Target Start/End: Original strand, 23866396 - 23866680
Alignment:
Q  2 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||| |||||||||| ||||    
T  23866396 caacaatcacagattattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agat 23866494  T
Q  101 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 199  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  23866495 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 23866594  T
Q  200 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23866595 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 27941127 - 27940815
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| || || ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||| | |||||  ||||||    
T  27941127 acaacaaatatagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcataacaacagtatagat 27941029  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat--ttatct 198  Q
    ||| |||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||  | ||||  |||| |    
T  27941028 taaattttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaattcccaattcttattt 27940930  T
Q  199 tccaa-aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacag 297  Q
    | ||| ||| || | | |    |||||||||||||| ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||||||||||||    
T  27940929 ttcaagaacaattctaatcaaacaattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacag 27940830  T
Q  298 cacaatcggttccta 312  Q
    |||||||||||||||    
T  27940829 cacaatcggttccta 27940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 17054440 - 17054656
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  17054440 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 17054536  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  266 ccttaccttagttttgcagaa 286  Q
    ||||||||| |||||||||||    
T  17054636 ccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  166 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctca 264  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||| ||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  265 cccttacctta 275  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 312
Target Start/End: Complemental strand, 14056619 - 14056527
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttccta 14056527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 25111976 - 25112064
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggtt 308  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||| |||| |||| |||| || ||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaagattgcacaacaaaatcggtt 25112064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 30765925 - 30765873
Alignment:
Q  260 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 30765873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||| | ||||||||||| || ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 21325791 - 21325730
Alignment:
Q  251 gagagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 311  Q
    ||||| ||| |||||||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21325791 gagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21325730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 21321192 - 21321132
Alignment:
Q  252 agagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 311  Q
    |||| ||||||| |||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21321192 agagttagtctcgcccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 1025 - 740
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    |||||||| |||  || |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| ||||    
T  1025 acaacaatcacaaatctttccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-agat 927  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||| || |||||||||||||||||| || |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  926 taagtttttatcctgaacattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttc 827  T
Q  201 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  826 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 19661726 - 19661454
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| ||||||    
T  19661726 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagat 19661628  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  19661627 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 19661529  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19661528 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 6483500 - 6483772
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  6483500 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 6483598  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  6483599 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 6483697  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6483698 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 6486967 - 6487239
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  6486967 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 6487065  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  6487066 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 6487164  T
Q  201 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6487165 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 286
Target Start/End: Original strand, 26583617 - 26583892
Alignment:
Q  9 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 108  Q
    ||||| |||||||||||||||||| || |||| |||||||||||| |  |  |||||   | |||| || ||||||||||||||  |||||||| |  ||    
T  26583617 tacagatcattccaccatcatacaaaatttcaccaattcatccaaccaattctaattacaattcaaattgtgatcacagcaacattatagattaggaatt 26583716  T
Q  109 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaacta 208  Q
    |||||||||||| |  |||||||| | |||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  26583717 cattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaacta 26583815  T
Q  209 tgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26583816 tgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 273
Target Start/End: Complemental strand, 23089320 - 23089057
Alignment:
Q  9 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 108  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||    
T  23089320 tacagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagattt 23089222  T
Q  109 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaact 207  Q
    ||||| |||| | | ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   |    
T  23089221 cattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggtt 23089124  T
Q  208 atgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 273  Q
    | |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  23089123 aagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 9 - 273
Target Start/End: Original strand, 23878798 - 23879060
Alignment:
Q  9 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 108  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||  |  || || |||||||||||||||||||| |||||  |||||||||| |||    
T  23878798 tacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattctattt-tcaatcaatttatgatcacaacaacagtatagattaagattt 23878896  T
Q  109 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaact 207  Q
    |||||||||||| | ||||||||| |||||||||||| |||||||  ||||| |||||||||||| | |||||||||||||||||| ||| | |||   |    
T  23878897 cattctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcct-caaggtt 23878994  T
Q  208 atgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    | |||||||||||||||||  ||||||||| || || ||||  |||||||||||||||||||||||    
T  23878995 aagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 15 - 275
Target Start/End: Complemental strand, 23101722 - 23101463
Alignment:
Q  15 tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattct 114  Q
    |||||||||||||||||| || ||||| |||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| ||||||||     
T  23101722 tcattccaccatcatacagaacttcatgaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattcc 23101624  T
Q  115 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaa 213  Q
    |||| | | ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   ||  |||    
T  23101623 gaacgtcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaa 23101526  T
Q  214 ttaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||||    
T  23101525 ttaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  162 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagt 260  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  261 ctcacccttaccttag 276  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 6260186 - 6260135
Alignment:
Q  261 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260186 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 6260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  214 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 19665081 - 19665037
Alignment:
Q  268 ttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcggttccta 19665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 286
Target Start/End: Complemental strand, 23168483 - 23168288
Alignment:
Q  95 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 194  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  195 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23168383 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 286
Target Start/End: Complemental strand, 23579740 - 23579545
Alignment:
Q  95 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 194  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  195 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23579640 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  204 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 285  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 14670 - 14398
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||  | ||||||||||| ||||||||  ||||| || ||||||| |||||||||||||||||| |||||||    
T  14670 acaacaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattt-tcaatcagtttatgatcacagcaacagcatagat 14572  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    ||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14571 taagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 14472  T
Q  201 c-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14471 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 111728 - 111948
Alignment:
Q  67 tcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcaga 166  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  111728 tcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcaga 111827  T
Q  167 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  111828 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcac 111927  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  111928 ccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 111682 - 111727
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaatt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  111682 acaacaattacagatcattccaccatcatacacaaattcatcaatt 111727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 20437297 - 20437024
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  20437297 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 20437199  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  20437198 taagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 20437100  T
Q  201 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20437099 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 67 - 286
Target Start/End: Original strand, 41111884 - 41112100
Alignment:
Q  67 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 165  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||   |  |||| ||||  || ||||    
T  41111884 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcag 41111980  T
Q  166 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 265  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  266 ccttaccttagttttgcagaa 286  Q
    |||||||||||||||||||||    
T  41112080 ccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 9 - 312
Target Start/End: Original strand, 11131 - 11433
Alignment:
Q  9 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 108  Q
    ||||| ||| |||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  || ||||||| |||    
T  11131 tacagatcaatccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatggattaagattt 11229  T
Q  109 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaact 207  Q
    |||| ||||||| | |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  11230 cattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaact 11328  T
Q  208 atgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggt 307  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  11329 aagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggt 11428  T
Q  308 tccta 312  Q
    |||||    
T  11429 tccta 11433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 10469 - 10195
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  10469 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 10371  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  10370 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 10272  T
Q  201 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  10271 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 1799 - 1525
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  1799 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 1701  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  1700 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 1602  T
Q  201 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1601 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 17950 - 18261
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||  |||||||||||| | ||||||||||| ||||||||  ||  |||| |||||||||| ||||||||||||||||||||| |    
T  17950 acaacaattacagatcatcacaccatcatacaaatattcatcaatttatccaatcaatccaaatt-tcaatcaattcatgatcacagcaacaacataggt 18048  T
Q  101 taagttttcattctgaacattatattacaa-cagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 199  Q
    ||||||||||||||| |||| | ||||||| ||||||||||||||  |||||| ||||||| | ||||||||||| ||||| ||||||||||||||| ||    
T  18049 taagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttatttt 18147  T
Q  200 ccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagc 298  Q
    || ||| ||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  18148 cctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacaac 18247  T
Q  299 acaatcggttccta 312  Q
    ||||||||||||||    
T  18248 acaatcggttccta 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 2171 - 1887
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    |||||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| ||||| | | |||||||| ||||||||||||||||||||  |||    
T  2171 acaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggat 2072  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||    
T  2071 taagttttcattatgaacattaaattacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttc 1974  T
Q  201 caaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1973 caaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 8848 - 8564
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    |||||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| || || | | |||||||| ||||||||||||||||||||  |||    
T  8848 acaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggat 8749  T
Q  101 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 200  Q
    |||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||    
T  8748 taagttttcattttgaacattaaattacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttc 8651  T
Q  201 caaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8650 caaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 286
Target Start/End: Original strand, 75 - 356
Alignment:
Q  2 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 101  Q
    |||||| ||||| ||| |||||||| |||||   ||||||||||| |||||| |  |||||||| |||| ||||||||||||||| ||| ||||||||||    
T  75 caacaaatacagatcactccaccattatacaattattcatcaatttatccaaccaatcataatt-tcaaccaatttatgatcacatcaataacatagatt 173  T
Q  102 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 201  Q
    |||| |||| ||||||||  ||| ||||| | |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  174 aagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttcc 272  T
Q  202 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  273 aaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 312
Target Start/End: Original strand, 30715 - 30949
Alignment:
Q  79 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 178  Q
    |||||||| |||||  |||||||| |  ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  179 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagt 277  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagt 30914  T
Q  278 tttgcagaatgattacacagcacaatcggttccta 312  Q
    ||||||||| |||||||||||| ||||| ||||||    
T  30915 tttgcagaaggattacacagcaaaatcgattccta 30949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 9 - 273
Target Start/End: Complemental strand, 3559 - 3295
Alignment:
Q  9 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 108  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  |||||||||| |||    
T  3559 tacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatagattaagattt 3461  T
Q  109 cattctgaacattatattacaacagaattaacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaac 206  Q
    |||||||||||| | ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||||       
T  3460 cattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatc-cccaaggt 3363  T
Q  207 tatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 273  Q
    || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3362 taagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 15 - 273
Target Start/End: Complemental strand, 3881 - 3624
Alignment:
Q  15 tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattct 114  Q
    |||||||||||||||||| || |||||||||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| ||||||||     
T  3881 tcattccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattcc 3783  T
Q  115 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaa 213  Q
    |||||| | ||||||||| |||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||| | |||   || ||||    
T  3782 gaacatcacattacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaa 3685  T
Q  214 ttaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 273  Q
    |||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3684 ttaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3443 - 3558
Alignment:
Q  1 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||| ||||    
T  3443 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagat 3542  T
Q  101 taagttttcattctga 116  Q
    ||||||||||||||||    
T  3543 taagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 85 - 281
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  85 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 184  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  185 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 281  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 85 - 281
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  85 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 184  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  185 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 281  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 904 - 991
Alignment:
Q  193 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  193 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 280  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 806 - 901
Alignment:
Q  36 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 132  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  36 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 132  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 220 - 312
Target Start/End: Complemental strand, 40587 - 40495
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 40495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  164 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtct 262  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  263 cacccttaccttagttttgc 282  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 135473 - 135562
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 309  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| ||||| |||| ||||||| |||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttc 135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 22646 - 22556
Alignment:
Q  222 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||  ||| ||||||| ||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttccta 22556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 17643 - 17723
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 299  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 17723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 2256 - 2212
Alignment:
Q  268 ttaccttagttttgcagaatgattacacagcacaatcggttccta 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcggttccta 2212  T

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Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  211 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  224 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 286  Q
    |||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

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Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 286
Target Start/End: Complemental strand, 23760 - 23559
Alignment:
Q  86 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 185  Q
    |||||||  ||||||||||   |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||     
T  23760 agcaacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaat 23661  T
Q  186 cctcaattta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcag 284  Q
     ||||||||  ||||| | |||||| |  |||| | ||||||||||||||||| |||||||| ||  | ||||| || ||||||||||||||  ||||||    
T  23660 tctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcag 23561  T
Q  285 aa 286  Q
    ||    
T  23560 aa 23559  T

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Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 680 - 780
Alignment:
Q  187 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 285  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| || || ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  286 a 286  Q
    |    
T  780 a 780  T

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Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  192 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 275
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  156 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 254  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  255 gatagtctcacccttacctta 275  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  220 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 287
Target Start/End: Original strand, 5487 - 5520
Alignment:
Q  254 agatagtctcacccttaccttagttttgcagaat 287  Q
    ||||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaat 5520  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  204 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 285  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 14668 - 14620
Alignment:
Q  261 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 309  Q
    |||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  14668 ctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttc 14620  T

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Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 279  Q
    ||||||||| ||||||||| |||||||| || ||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 273
Target Start/End: Original strand, 73149 - 73337
Alignment:
Q  86 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 185  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||     
T  73149 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaat 73248  T
Q  186 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 273  Q
     |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| || || ||||| || |||||||||||    
T  73249 tctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  221 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  192 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 276  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| || || ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  219 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 275  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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